RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16952481	A	G	0.00093	CROCCP2	-	FALSE
chr6	41900765	A	G	0.00256	BYSL	+	FALSE
chr3	197682724	T	A	0.00556	IQCG	-	FALSE
chr3	197024681	T	C	0.00018	DLG1	-	FALSE
chr1	1622754	A	G	0.00426	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr1	53288862	A	G	0.00503	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	33185522	C	A	1.53330E-10	CRTAP	+	FALSE	L2a	SINE,Alu
chr1	206566195	C	T	0.00706	SRGAP2	+	FALSE
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr2	209113192	G	A	0.00610	IDH1	-	FALSE
chrX	3526613	C	T	0.00930	PRKX	-	FALSE
chr1	154128333	T	A	0.00204	TPM3	-	FALSE
chr1	120163248	G	A	0.00711	ZNF697	-	FALSE
chr15	90819444	A	G	5.90002E-05		.	FALSE	AluSx	SINE,Alu
chr1	104097685	C	T	0.00721	RNPC3,AMY2B	+	FALSE
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr1	204393480	T	A	0.00783	PIK3C2B	-	FALSE
chr11	20101744	C	A	0.00540	NAV2	+	FALSE
chr1	16927419	G	A	0.00493	NBPF1	-	FALSE
chr2	277003	A	G	1.77913E-11	ACP1	+	FALSE
chr1	19586501	A	G	0.00119	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	28835934	A	G	0.00193	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	154320942	A	G	0.00579	ATP8B2	+	FALSE
chr14	23300642	C	A	0.00266	MRPL52	+	FALSE	MIRb	SINE,Alu
chr20	25427823	A	G	0.00054	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	56150864	C	T	0.00615	EFEMP1	-	FALSE
chr1	169101269	T	G	0.00207	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr3	33430398	T	A	0.00025	UBP1	-	FALSE
chr1	85786957	T	G	0.00959	DDAH1	-	FALSE
chr1	33148691	A	G	0.00207	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	79276281	A	G	0.00026	MTX3	-	FALSE
chr1	53291434	A	G	6.17060E-06	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	19543247	T	C	0.00870	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	3730400	T	C	0.00800	CEP104	-	TRUE	AluSx3	SINE,Alu
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr1	154554951	A	G	0.00554	ADAR	-	FALSE
chr7	21941586	A	C	0.00016	CDCA7L	-	FALSE
chr1	10520684	T	C	0.00389	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	67874270	G	A	0.00019	SERBP1	-	FALSE
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr1	33148211	A	G	9.09328E-07	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	120163248	G	A	0.00204	ZNF697	-	FALSE
chr3	46007823	G	T	6.71801E-06	FYCO1	-	FALSE
chr19	46053369	T	C	0.00504	OPA3	-	TRUE	AluSx1	SINE,Alu
chr1	118408218	C	A	0.00857	GDAP2	-	FALSE
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr3	40503729	A	G	5.91625E-05	RPL14	+	FALSE
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr1	180169330	C	T	0.00374	FLJ23867	+	FALSE	MIR	SINE,Alu
chr2	37329347	T	C	0.00155		.	FALSE	AluJr4	SINE,Alu
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr1	155695968	A	G	0.00439	DAP3	+	TRUE	AluSp	SINE,Alu
chr2	17836722	T	A	0.00816	VSNL1	+	FALSE
chr5	40826638	C	A	0.00749	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr1	16892274	A	T	0.00119	NBPF1	-	FALSE
chr7	22983600	T	C	0.00025	FAM126A	-	FALSE
chr12	133297904	A	G	8.99170E-13	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	206566948	G	A	0.00228	SRGAP2	+	FALSE
chr1	179042687	A	G	0.00782	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	147124310	T	G	0.00968	ACP6	-	FALSE
chr8	98736864	T	A	0.00086	MTDH	+	FALSE
chr12	6572048	A	G	0.00410	VAMP1	-	FALSE
chr1	64125439	A	C	3.63698E-07	PGM1	+	FALSE
chr1	154317153	C	T	0.00483	ATP8B2	+	FALSE
chr6	17557412	C	T	0.00986	CAP2	+	FALSE
chr2	128951094	A	G	0.00415	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	92865902	A	G	0.00040		.	FALSE	AluJr	SINE,Alu
chrX	123046757	A	G	0.00535	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr2	183601110	T	G	0.00824	DNAJC10	+	FALSE
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr2	217366191	T	A	0.00306		.	FALSE
chr2	200792052	G	A	0.00378	C2orf69	+	FALSE
chr1	9644558	A	G	0.00644		.	FALSE	AluSx	SINE,Alu
chr8	12879062	T	C	0.00035	KIAA1456	+	FALSE
chr1	26161108	A	C	7.55238E-06	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	26144435	C	G	4.88757E-05	SEPN1	+	FALSE
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr1	38002068	C	T	0.00962	SNIP1	-	FALSE
chr1	148241604	G	T	0.00756	NBPF8	-	FALSE	U1	SINE,Alu
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr1	117617705	A	G	0.00031	TTF2	+	FALSE
chr1	6283264	T	C	0.00521	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	176026131	A	T	0.00979	GPRIN1	-	FALSE
chr7	55266417	T	C	0.00201	EGFR	+	FALSE
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr1	1255412	C	A	0.00751	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr1	10521172	T	C	0.00178	DFFA	-	TRUE	AluY	SINE,Alu
chr4	109733172	T	C	0.00480	COL25A1	-	FALSE
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr7	16899197	C	T	0.00926	AGR3	-	FALSE
chr1	43272841	A	T	0.00029	SVBP	-	FALSE
chr1	24288535	A	T	0.00271	PNRC2	+	FALSE
chr14	72041443	C	T	0.00842	SIPA1L1	+	FALSE
chrX	123045405	A	G	0.00551	XIAP	+	TRUE	AluJo	SINE,Alu
chr1	168218504	T	C	0.00748		.	FALSE	AluSz	SINE,Alu
chr17	263367	A	T	2.02495E-05	LOC105371430,C17orf97	+,-	FALSE
chr1	26755455	A	G	0.00342	LIN28A	+	TRUE	AluSc	SINE,Alu
chr2	37331525	T	C	0.00140		.	FALSE	AluJb	SINE,Alu
chr1	149818441	T	C	0.00773		.	FALSE	MLT1D	SINE,Alu
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr1	36386884	C	T	0.00375	AGO1	+	FALSE
chr5	133738270	T	C	5.55380E-10	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	26158907	A	G	0.00061	MTFR1L,AUNIP	+,-	FALSE
chr7	44918736	T	C	4.05417E-05	PURB	-	TRUE	AluSg	SINE,Alu
chr14	74526952	T	C	0.00019	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr4	66439707	T	C	0.00148	EPHA5	-	FALSE
chr17	7124772	G	A	0.00175	ACADVL	+	FALSE
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr1	75175797	G	A	0.00203	CRYZ	-	FALSE
chr1	27182751	C	A	0.00122		.	FALSE
chr1	156518379	G	A	0.00498	IQGAP3	-	FALSE
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr7	29961939	G	T	1.47033E-05	SCRN1	-	FALSE
chr4	17629921	A	G	0.00454		.	FALSE	MER90	SINE,Alu
chr3	24019977	A	C	0.00281	NR1D2	+	FALSE
chr8	143739343	T	C	0.00999	JRK	-	FALSE
chrM	8859	G	A	0.00929		.	FALSE
chr1	230975454	A	G	0.00438	C1orf198	-	FALSE
chr2	128061053	A	G	0.00184	MAP3K2	-	FALSE
chr1	217688165	C	A	0.00343	GPATCH2	-	FALSE
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr1	146627405	C	G	0.00074	PRKAB2	-	FALSE
chr1	19543249	T	C	1.15194E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr8	37613073	A	C	0.00394	ERLIN2	+	FALSE	(CCCCCAC)n	SINE,Alu
chr1	11347155	C	T	0.00366	UBIAD1	+	FALSE
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr1	145688973	A	G	0.00017	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	52306082	A	T	0.00038	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr4	84525973	C	G	0.00148	GPAT3	+	FALSE
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr2	55516938	A	T	0.00265	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr20	35410314	T	C	0.00602	SOGA1	-	TRUE	AluSz	SINE,Alu
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr2	36704033	T	A	0.00012	CRIM1	+	FALSE
chr1	1650832	A	G	0.00407	CDK11B,CDK11A	-	FALSE
chr1	33149375	A	G	0.00840	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	148748257	C	G	0.00989	HLTF	-	FALSE
chr15	52203664	A	C	0.01000	TMOD3	+	FALSE
chr1	33149399	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr1	156005447	C	A	0.00337	UBQLN4	-	FALSE
chr15	90627429	T	C	0.00013	IDH2	-	FALSE
chr11	69480680	T	C	0.00252	ORAOV1	-	FALSE	AluSx1	SINE,Alu
chr1	53291395	A	G	0.00323	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr6	158093827	C	T	0.00201	ZDHHC14	+	FALSE
chr17	41144250	G	T	0.00025	RUNDC1	+	FALSE
chr1	97144886	A	G	0.00078		.	FALSE
chr2	37328008	T	C	0.00733		.	FALSE
chr4	10447986	T	A	0.00077	ZNF518B	-	FALSE
chr6	158517308	A	G	0.00959	SYNJ2	+	FALSE
chr11	125526125	A	G	0.00374	CHEK1	+	TRUE	FRAM	SINE,Alu
chr6	16305357	C	T	0.00559	ATXN1	-	FALSE
chr6	150047370	T	C	0.00084	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	160966351	T	C	0.00023	F11R	-	TRUE	AluSg	SINE,Alu
chr14	50053316	T	C	0.00115		.	FALSE	7SLRNA	SINE,Alu
chr2	98272734	A	G	0.00996	ACTR1B	-	FALSE
chr1	1594977	T	C	0.00487	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr3	170021211	A	C	3.61705E-05	PRKCI	+	FALSE
chr1	145369589	T	C	0.00696	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	179326296	A	G	0.00171	SOAT1	+	TRUE
chr1	220231347	T	C	0.00963	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	244871041	T	A	0.00590	DESI2	+	FALSE
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	990984	G	A	0.00787	AGRN	+	FALSE
chr1	26143725	A	T	0.00291	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	567783	T	C	0.00817	MIR6723	-	FALSE
chr1	67874697	T	C	0.00163	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr17	46024807	C	T	0.00295	PNPO	+	FALSE
chr7	44841799	A	G	0.00693	PPIA	+	TRUE	AluSx	SINE,Alu
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr2	206983267	T	C	0.00133		.	FALSE	AluJb	SINE,Alu
chr1	9163442	T	C	0.00235		.	FALSE	AluSp	SINE,Alu
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr4	2940091	T	C	0.00212	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	1683565	G	A	0.00552	NADK	-	FALSE
chr1	109475629	A	G	0.00305	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	156713558	G	A	8.10199E-06	HDGF	-	FALSE
chr22	35817553	C	T	0.00038	MCM5	+	FALSE
chr1	21795388	A	G	0.00732	NBPF3	+	FALSE
chr6	26095468	A	G	0.00980	HFE	+	TRUE	AluY	SINE,Alu
chr1	145282799	G	A	0.00915	NBPF20,NOTCH2NL	+	FALSE
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr2	50148477	C	T	0.00741	NRXN1	-	FALSE
chr3	179115635	T	C	0.00453	GNB4	-	TRUE	AluSg7	SINE,Alu
chr1	23835919	C	T	0.00872	E2F2	-	FALSE
chr1	10521126	T	C	0.00560	DFFA	-	TRUE	AluY	SINE,Alu
chr1	145284175	G	C	0.00481	NBPF20,NOTCH2NL	+	FALSE
chr1	46075719	A	G	0.00461	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	67874696	T	C	0.00098	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr7	131241085	G	A	0.00600	PODXL	-	FALSE	(GCA)n	SINE,Alu
chr8	48890109	A	G	8.88178E-16	MCM4	+	TRUE	AluJb	SINE,Alu
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr1	27481039	A	G	0.00021	SLC9A1	-	FALSE
chr1	39500293	T	A	0.00552	NDUFS5	+	FALSE
chr1	14106404	G	C	0.00156	PRDM2	+	FALSE
chr1	7737792	C	G	8.96820E-06	CAMTA1	+	FALSE
chr1	51434560	G	A	6.87938E-05	CDKN2C	+	FALSE
chr20	309186	A	G	0.00665	SOX12	+	FALSE	A-rich	SINE,Alu
chr1	226172221	T	C	0.00030	SDE2	-	FALSE	L1MEf	SINE,Alu
chr1	226171340	T	C	0.00462	SDE2	-	TRUE	BC200	SINE,Alu
chr4	88059663	G	T	0.00165	AFF1	+	FALSE	(GT)n	SINE,Alu
chr1	40722795	G	A	9.35494E-07		.	FALSE	Charlie2a	SINE,Alu
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr1	109465167	T	A	0.00233	GPSM2	+	FALSE
chr1	163288931	G	A	0.00284	RGS5	-	FALSE	MamRep1527	SINE,Alu
chr5	156904831	T	C	0.00351	ADAM19	-	TRUE	MER92B	SINE,Alu
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr5	43380822	T	C	0.00462	CCL28	-	TRUE	AluJb	SINE,Alu
chr1	16889414	T	C	0.00858	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr5	37290413	T	C	0.00467		.	FALSE	AluSz	SINE,Alu
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	223807622	G	T	0.00875	ACSL3	+	FALSE
chr22	18572597	A	G	0.00322	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	39951484	C	A	0.00592	MACF1	+	FALSE
chr16	18794286	C	T	0.00633	RPS15A	-	FALSE
chr1	26143727	A	T	0.00602	SEPN1	+	FALSE	AluSx	SINE,Alu
chr3	179117646	G	A	0.00812	GNB4	-	FALSE
chr1	16890639	C	T	5.60894E-05	NBPF1	-	FALSE
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr16	23478710	C	A	0.00335	GGA2	-	FALSE	(AC)n	SINE,Alu
chr1	22400707	C	G	0.00232	CDC42	+	FALSE	AluSc8	SINE,Alu
chr1	16901668	T	C	0.00421	NBPF1	-	FALSE
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr8	100890423	C	A	0.00113	COX6C	-	FALSE
chr17	43364293	C	G	0.00144	MAP3K14	-	FALSE
chr1	205687358	T	C	0.00432	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr7	29960211	C	A	0.00034	SCRN1	-	FALSE
chr1	49227052	A	T	0.00020	AGBL4,BEND5	-	FALSE
chr1	53292875	G	T	8.43181E-07	ZYG11B	+	FALSE
chr1	46500251	G	A	0.00205	MAST2	+	FALSE
chr20	18468351	T	C	0.00169	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	46075779	A	G	0.00640	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	9328223	A	G	0.00591	H6PD	+	TRUE	AluJr	SINE,Alu
chr6	3114457	C	T	0.00320	RIPK1	+	FALSE
chr2	206987108	T	C	0.00015		.	FALSE	AluSx	SINE,Alu
chr3	112720120	T	G	0.00573	GTPBP8	+	FALSE
chr1	93308166	C	T	0.00334	FAM69A	-	FALSE
chr1	19542433	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	78142856	T	C	0.00086	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr3	88104167	T	C	0.00919	CGGBP1	-	FALSE
chr4	56295166	A	G	0.00988	CLOCK	-	FALSE
chr19	11256689	T	C	9.47404E-06	SPC24	-	TRUE	AluJr4	SINE,Alu
chr2	64119873	A	T	0.00492	VPS54	-	FALSE
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	160967833	T	C	0.00717	F11R	-	TRUE	AluSp	SINE,Alu
chr8	56985609	G	T	0.00134	RPS20	-	FALSE
chr17	17425631	C	T	0.00036	PEMT	-	FALSE
chr1	230416412	C	G	0.00514	GALNT2	+	FALSE
chr14	62213926	T	C	0.00226	HIF1A,HIF1A-AS2	+,-	FALSE
chr3	14986104	T	C	0.00621	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr15	49283066	T	G	0.00065	SECISBP2L	-	FALSE
chr3	196079305	T	C	0.00161		.	FALSE	AluSx	SINE,Alu
chr1	3545186	T	G	0.00314	TPRG1L	+	FALSE
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr1	32661615	A	T	0.00225	TXLNA	+	FALSE
chr2	54888359	A	G	3.08576E-05	SPTBN1	+	FALSE
chr1	155695998	A	G	0.00078	DAP3	+	TRUE	AluSp	SINE,Alu
chr12	56510710	A	C	0.00050	RPL41	+	FALSE
chr1	11722688	G	A	0.00076	FBXO44	+	FALSE
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chr3	5026730	T	C	0.00488	BHLHE40	+	FALSE
chr1	26143725	A	T	0.00920	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	16932912	T	C	0.00808	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	45975279	T	C	0.00019	MMACHC	+	FALSE	AluSg7	SINE,Alu
chr1	179044309	A	G	0.00558	FAM20B	+	TRUE	AluSx	SINE,Alu
chr14	103372464	C	A	0.00577	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr2	176792357	A	G	7.02808E-05	LNPK	-	FALSE
chr1	6283434	T	C	0.00285	ICMT	-	TRUE	AluSx3	SINE,Alu
chr4	761850	T	C	0.00026	PCGF3	+	FALSE
chr1	184761312	T	C	0.00077	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	64095111	A	G	0.00201	PGM1	+	FALSE
chr1	179044216	A	G	0.00277	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr2	37429627	A	G	0.00330	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr2	64069566	A	G	0.00075	UGP2	+	FALSE
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr15	90820083	A	G	4.07036E-06		.	FALSE	AluY	SINE,Alu
chr1	145511962	A	G	0.00091	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	33149496	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr8	12880246	A	G	0.00012	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr5	43574976	T	C	0.00613	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr7	1199790	G	C	0.00049	ZFAND2A	-	FALSE
chr2	47604176	C	T	0.00328	EPCAM	+	FALSE
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr1	6681836	G	A	5.48259E-05	PHF13	+	FALSE
chr12	125512534	A	G	0.00024		.	FALSE
chr1	53378536	T	C	0.00075	ECHDC2	-	TRUE	AluSp	SINE,Alu
chr1	19542458	T	C	7.14858E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	150827307	G	T	0.00708	SLC36A1	+	FALSE
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr2	74349080	A	G	0.00094		.	FALSE	AluSz	SINE,Alu
chr8	56985611	A	T	0.00028	RPS20	-	FALSE
chr1	145509570	A	G	0.00043	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr15	42503336	C	T	0.00916	TMEM87A	-	FALSE	(T)n	SINE,Alu
chrX	119572534	C	A	0.00387	LAMP2	-	FALSE
chr1	43391826	G	T	0.00202	SLC2A1	-	FALSE
chr1	16892918	T	C	0.00128	NBPF1	-	FALSE
chr1	26128521	A	G	0.00251	SEPN1	+	TRUE	AluJb	SINE,Alu
chr16	10624996	T	C	0.00059	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	113247898	G	A	0.00077	RHOC	-	FALSE
chr1	24151858	C	T	0.00104	HMGCL	-	FALSE
chr1	54691921	G	A	0.00909	SSBP3	-	FALSE
chr1	143915747	G	A	0.00603		.	FALSE
chr1	183094547	T	C	0.00277	LAMC1	+	FALSE
chr1	46075791	A	G	0.00120	NASP	+	TRUE	AluSx4	SINE,Alu
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	42881767	G	C	0.00437	RIMKLA	+	FALSE
chr2	55776561	T	A	0.00092	PPP4R3B	-	FALSE
chr1	145293012	G	A	0.00250	NBPF20	+	FALSE
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr1	161930908	G	A	0.00083	ATF6	+	FALSE
chr5	133918133	A	C	0.00413	JADE2	+	FALSE
chr1	161488401	T	A	0.00622	FCGR2A	+	FALSE
chr17	41133087	A	G	0.00141	RUNDC1	+	FALSE
chr10	17275583	T	C	0.00374	VIM	+	FALSE
chr17	41133089	C	T	0.00179	RUNDC1	+	FALSE
chr2	219460472	T	C	0.00187	CNOT9	+	FALSE
chr1	86117191	T	C	1.34616E-06	ZNHIT6	-	TRUE	AluSg	SINE,Alu
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr1	51822219	G	A	0.00283	EPS15	-	FALSE
chr2	24494638	T	G	0.00495	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr1	9160900	T	C	0.00256		.	FALSE	AluJb	SINE,Alu
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16928737	C	T	0.00448	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr8	144940798	T	C	0.00255	EPPK1	-	FALSE
chr1	90470915	T	A	9.94810E-07	ZNF326	+	FALSE
chrX	77084038	T	C	0.00265	MAGT1	-	TRUE	AluSz	SINE,Alu
chr6	53363500	G	T	0.00684	GCLC	-	FALSE
chr2	71298486	T	C	0.00408	NAGK	+	FALSE
chr3	191110544	T	G	0.00031	CCDC50	+	FALSE	AluSz	SINE,Alu
chr19	16661483	T	C	0.00824	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr6	52860746	T	G	0.00011		.	FALSE	7SK	SINE,Alu
chr10	94414146	A	G	0.00911	KIF11	+	FALSE
chr1	23419855	T	C	0.00555	LUZP1	-	FALSE
chr2	232319524	T	A	0.00040	NCL	-	FALSE
chr9	70648427	G	A	0.00096		.	FALSE	TAR1	SINE,Alu
chr1	145512950	A	G	2.03454E-08	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu

RBP	NELFE
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR939ZRA
Platform	HiSeq
Pubmed ID	32252787

NELFE - Target Gene Network