RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	19992312	A	G	0.00798	RAB5A	+	FALSE
chr1	10517659	T	C	0.00679		.	FALSE	AluSx1	SINE,Alu
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr16	1411034	A	G	0.00322	GNPTG	+	TRUE	AluSz	SINE,Alu
chr1	28906337	A	G	0.00810	SNHG12,SNORA61	-	FALSE
chr1	36068275	T	C	0.00625	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	6283260	T	C	0.00402	ICMT	-	TRUE	AluSx3	SINE,Alu
chr19	2426238	T	G	0.00129	TIMM13,TMPRSS9	+,-	FALSE
chr14	53242674	T	C	1.74446E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	45975345	A	G	9.37661E-05	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	32533707	A	G	0.00395		.	FALSE	AluSp	SINE,Alu
chr2	27001973	C	T	0.00327	SLC35F6	+	FALSE	AluSx	SINE,Alu
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr3	15296358	A	T	4.17447E-06	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	10194192	T	C	0.00715	KLF11	+	FALSE
chr1	145689566	A	G	2.12475E-08	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr16	10624966	T	C	3.33519E-08	EMP2	-	TRUE	AluSx3	SINE,Alu
chr2	131129926	G	T	0.00034	PTPN18	+	FALSE
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr2	72403405	A	C	0.00227	EXOC6B	-	FALSE	GA-rich	SINE,Alu
chr1	19586501	A	G	0.00055	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	6644327	A	G	0.00000	MRFAP1	+	FALSE
chr2	128949342	A	G	0.00397	UGGT1	+	TRUE	AluSg	SINE,Alu
chr1	46075191	C	A	0.00056	NASP	+	FALSE	A-rich	SINE,Alu
chrX	123046757	A	G	0.00535	XIAP	+	TRUE	AluSz	SINE,Alu
chr4	13583889	T	C	2.08207E-10	BOD1L1	-	FALSE
chr1	10521162	T	C	0.00911	DFFA	-	TRUE	AluY	SINE,Alu
chr1	236744712	C	A	0.00054	HEATR1	-	FALSE
chr3	71005566	C	T	0.00209	FOXP1	-	FALSE	(T)n	SINE,Alu
chr8	30643553	A	G	0.00968	PPP2CB	-	FALSE
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr1	40361783	G	C	0.00023	MYCL	-	FALSE
chr4	128958127	A	G	0.00556	ABHD18	+	TRUE	AluSx3	SINE,Alu
chr1	10518591	A	T	0.00545		.	FALSE
chr1	168220341	A	G	0.00179		.	FALSE	AluSz6	SINE,Alu
chr3	30047174	A	T	0.00556	RBMS3	+	FALSE
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	226333558	A	C	0.00052	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr2	24225177	A	G	0.00375		.	FALSE	AluSx	SINE,Alu
chr6	29910581	C	A	6.62336E-05		.	FALSE
chr19	39433141	A	G	0.00224	FBXO17	-	FALSE	AluJb	SINE,Alu
chr13	41635234	T	C	0.00395		.	FALSE
chr1	179326847	A	G	0.00577	SOAT1	+	TRUE	AluJo	SINE,Alu
chr3	196293764	G	C	0.00392	WDR53	-	FALSE
chr1	159946783	A	G	0.00097	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	145512951	A	G	4.65248E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	1647814	T	C	8.49337E-05	CDK11B,CDK11A	-	FALSE
chr1	17394048	T	A	0.00055	PADI2	-	FALSE
chr9	115446747	T	C	0.00648	INIP	-	TRUE	AluJr	SINE,Alu
chr2	234386134	A	G	0.00196	USP40	-	FALSE
chr1	40982042	G	A	0.00330	EXO5	+	FALSE	AluSx	SINE,Alu
chr1	20826784	T	C	0.00204	MUL1	-	FALSE
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chrX	77083915	T	C	0.00075	MAGT1	-	TRUE	AluSz	SINE,Alu
chr19	42731991	A	G	0.00598		.	FALSE	AluJr	SINE,Alu
chr1	16133912	T	C	0.00126	UQCRHL	-	TRUE
chr1	148251079	T	C	0.00880	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr3	45960560	T	A	0.00201	FYCO1	-	FALSE
chr1	180247483	T	C	0.00167		.	FALSE
chr1	74672474	G	A	0.00014	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	160967817	T	C	0.00478	F11R	-	TRUE	AluSp	SINE,Alu
chr5	79279310	T	A	0.00173	MTX3	-	FALSE
chr1	160966299	T	C	1.46976E-05	F11R	-	TRUE	AluSg	SINE,Alu
chr4	25749191	T	C	0.00301	SEL1L3	-	FALSE
chr2	113287424	T	A	0.00361	TTL	+	FALSE
chr10	71909957	G	T	0.00853		.	FALSE
chr2	208619742	A	G	0.00500	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr9	116022896	T	C	9.26547E-05	SLC31A1	+	FALSE
chr2	61277443	A	G	0.00362	PEX13	+	TRUE	AluSx	SINE,Alu
chr1	28785597	G	C	0.00595	PHACTR4	+	FALSE
chr1	90048248	C	T	3.54659E-05	LRRC8B	+	FALSE
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr3	99463810	G	T	0.00599	MIR548G,COL8A1	+,-	FALSE
chr1	35817022	T	A	0.00072	ZMYM4	+	FALSE
chr6	31626580	G	A	0.00291		.	FALSE
chr1	1344749	A	G	3.37361E-05		.	FALSE	AluSx1	SINE,Alu
chr1	19542456	T	C	0.00186	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	78532658	C	T	0.00882	JMY	+	FALSE
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr6	133135886	A	G	0.00629	RPS12	+	FALSE
chr9	86584220	G	A	0.00318	HNRNPK	-	FALSE
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	98409998	G	T	0.00261	TMEM131	-	FALSE
chr16	10623544	T	C	2.29348E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	1717473	A	C	0.00925	GNB1	-	FALSE
chr2	128952015	A	G	0.00086	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	10520725	T	C	0.00234	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	105295461	G	A	9.74520E-12	ALCAM	+	FALSE
chr3	14528004	T	C	0.00091	SLC6A6	+	FALSE
chr3	181431106	C	G	0.00542	SOX2-OT,SOX2	+	FALSE
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr3	48787118	T	C	0.00359	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr1	36068276	T	C	2.73596E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	144931392	G	A	0.00683	NBPF20,PDE4DIP	+,-	FALSE
chr1	2335348	C	T	0.00018	RER1	+	FALSE
chr3	109049163	A	G	0.00440	DPPA4	-	FALSE	AluSp	SINE,Alu
chr1	10518733	T	C	0.00399		.	FALSE	AluSx1	SINE,Alu
chr1	27205634	T	C	0.00025		.	FALSE	FLAM_A	SINE,Alu
chr1	109780743	C	A	0.00643	SARS	+	FALSE
chr1	36535403	A	G	0.00320		.	FALSE	AluSx1	SINE,Alu
chr10	63852210	C	T	0.00324	ARID5B	+	FALSE
chr1	45976260	C	T	0.00043	MMACHC	+	FALSE
chr2	178086786	A	G	0.00305	HNRNPA3	+	FALSE
chr3	12942852	C	A	0.00458	IQSEC1	-	FALSE
chr1	38326774	T	C	0.00664	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	10520819	T	C	0.00022	DFFA	-	TRUE	AluSc8	SINE,Alu
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr3	108298260	C	T	0.00042	KIAA1524	-	FALSE
chr1	1252184	A	G	0.00778	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr1	10520532	T	C	0.00142		.	FALSE	AluSx1	SINE,Alu
chr1	28661831	A	G	9.37902E-09	MED18	+	TRUE	AluSg	SINE,Alu
chr12	49075983	C	G	0.00321	KANSL2	-	FALSE
chr2	128060859	T	A	0.00016	MAP3K2	-	FALSE
chr1	45279900	T	C	0.00073		.	FALSE	(TCTT)n	SINE,Alu
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr4	25749192	C	T	0.00642	SEL1L3	-	FALSE
chr1	16200163	A	G	1.36684E-05	SPEN	+	FALSE
chr2	128950515	A	G	0.00208	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	6684050	G	A	2.21294E-05	PHF13	+	FALSE
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr1	28836900	A	G	0.00311	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	149913731	T	C	0.00198	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr8	92075904	T	C	0.00242	OTUD6B-AS1	-	FALSE	LTR67B	SINE,Alu
chr19	49619561	T	C	2.39173E-05	LIN7B	+	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr1	145293469	G	C	0.00888	NBPF20,NBPF10	+	FALSE
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr1	9331101	A	G	3.95613E-06	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	173457945	G	A	0.00287	PRDX6	+	FALSE
chr22	39069181	T	C	0.00346	CBY1	+	FALSE
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr1	145694181	A	G	0.00052	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr12	51324122	A	G	0.00226	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr1	100550370	T	A	0.00308	SASS6	-	FALSE
chr16	75480021	T	C	0.00270	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr2	24225006	A	G	0.00555		.	FALSE	AluSx	SINE,Alu
chr5	179720333	A	G	0.00308		.	FALSE
chr2	206986380	T	C	0.00053		.	FALSE	AluSz	SINE,Alu
chr19	19459215	C	T	0.00068	MAU2	+	FALSE
chr16	89630630	C	T	0.00296	RPL13	+	FALSE
chr1	203277243	G	T	1.60795E-05	BTG2	+	FALSE
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr2	9558812	G	T	0.00427	ITGB1BP1	-	FALSE
chr2	69688754	T	C	0.00319	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	211920314	T	C	0.00938	LPGAT1	-	FALSE
chr1	9163402	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr7	152551581	T	A	0.00313	ACTR3B	+	FALSE
chr1	6582176	T	C	0.00893	NOL9	-	TRUE	AluSq4	SINE,Alu
chr4	120219638	A	T	0.00970	C4orf3	-	FALSE
chr17	73940888	T	C	2.69053E-06	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr5	125961447	A	G	0.00025	PHAX	+	TRUE	AluSz6	SINE,Alu
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	150548881	G	A	9.52924E-05	MCL1	-	FALSE
chr1	179044239	A	G	0.00143	FAM20B	+	TRUE	AluSx	SINE,Alu
chr2	101622887	G	A	0.00711	RPL31	+	FALSE
chr2	128602967	T	G	0.00026		.	FALSE	AluSp	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr1	150048520	C	T	0.00089	VPS45	+	FALSE
chr1	9162362	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr3	48787640	T	C	0.00320	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr10	79552092	C	T	0.00159	DLG5	-	FALSE
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr1	27205214	T	C	0.00799		.	FALSE	AluSc	SINE,Alu
chr4	187509420	G	A	0.00121	FAT1	-	FALSE
chr1	36067677	T	C	0.00522	PSMB2	-	TRUE	AluSz	SINE,Alu
chr13	24823699	G	A	0.00472	SPATA13	+	FALSE
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr6	74134781	T	C	0.00789		.	FALSE	AluSz	SINE,Alu
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr1	145689798	A	G	0.00200	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	10517276	T	C	0.00252		.	FALSE	AluJr	SINE,Alu
chr11	64084160	C	T	0.00895	ESRRA,TRMT112	+,-	FALSE
chr2	32535865	A	G	0.00684		.	FALSE	AluJb	SINE,Alu
chr1	175129946	C	T	0.00466	KIAA0040	-	FALSE	(TCT)n	SINE,Alu
chr2	37327677	T	C	0.00019		.	FALSE
chr7	21941393	A	T	0.00937	CDCA7L	-	FALSE
chr1	16893813	A	G	7.34801E-05	NBPF1	-	FALSE
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr19	13884084	A	G	0.00843	MRI1	+	TRUE	AluSz	SINE,Alu
chr16	29454288	T	C	9.60363E-06	SMG1P6,BOLA2-SMG1P6	-	FALSE	Tigger4a	SINE,Alu
chr5	70503941	C	A	0.00130		.	FALSE
chr16	9204015	C	T	0.00325	C16orf72	+	FALSE
chr1	19543465	T	C	0.00117	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	71412707	G	A	0.00305	PAIP2B	-	FALSE	AluJr	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr1	247319704	T	A	0.00053	ZNF124	-	FALSE
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr16	23478710	C	A	0.00335	GGA2	-	FALSE	(AC)n	SINE,Alu
chr1	109793319	C	T	0.00027	CELSR2	+	FALSE
chr19	35741552	C	T	0.00165	LSR	+	FALSE
chr1	1656557	T	C	0.00061	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr3	195242996	C	A	0.00136	PPP1R2	-	FALSE
chr2	88913273	G	C	0.00152	EIF2AK3	-	FALSE
chr1	16889642	T	C	0.00017	NBPF1	-	TRUE
chr1	204521576	A	G	0.00021	MDM4	+	TRUE	AluSg	SINE,Alu
chr2	208619320	A	G	0.00339	CCNYL1	+	FALSE	EutTc1-N1	SINE,Alu
chr2	37431639	T	C	0.00160	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	144813815	A	G	2.28281E-05	NBPF20,NBPF9	+	FALSE
chr17	4929000	A	G	0.00214	KIF1C	+	TRUE	AluY	SINE,Alu
chr2	113289701	T	G	0.00994	TTL	+	FALSE
chr2	183601110	T	G	0.00824	DNAJC10	+	FALSE
chr1	24798089	G	A	0.00815	NIPAL3	+	FALSE
chr19	46052975	T	C	0.00652	OPA3	-	TRUE	AluSz6	SINE,Alu
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr1	226333560	A	T	0.00339	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr9	131093971	A	G	0.00033	COQ4	+	TRUE	AluJo	SINE,Alu
chr3	44790772	T	C	0.00024	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	19984107	G	A	0.00963	MINOS1-NBL1,NBL1	+	FALSE
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr6	111588769	A	G	2.24603E-05	MFSD4B	+	TRUE	AluYm1	SINE,Alu
chr12	56510709	G	A	0.00047	RPL41	+	FALSE
chr3	196555443	C	A	3.82991E-09	PAK2	+	FALSE
chr3	185009713	G	T	0.00106	MAP3K13	+	FALSE
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr8	41399823	A	G	0.00172	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr3	195435168	T	G	0.00111	LINC00969	+	FALSE
chr1	10517672	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr1	180247476	T	C	0.00890		.	FALSE
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr6	160100882	T	C	0.00494	SOD2	-	TRUE	AluSz	SINE,Alu
chr7	22983702	A	T	7.71363E-07	FAM126A	-	FALSE
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr5	125961532	A	G	0.00039	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr2	197004439	A	G	0.00034	STK17B	-	FALSE
chr1	33149496	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr4	164245873	T	A	0.00014	NPY1R	-	FALSE
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr11	125525572	A	C	0.00016	CHEK1	+	FALSE
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	32372387	A	C	0.00757	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr2	114718893	C	G	0.00631	ACTR3	+	FALSE
chr2	192699639	A	G	0.00017	SDPR	-	FALSE
chr1	9161179	T	C	0.00570		.	FALSE	AluSx	SINE,Alu
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	158067060	T	A	0.00778	KIRREL	+	FALSE
chr2	9630247	T	G	0.00638	ADAM17	-	FALSE
chr1	9160989	T	C	0.00183		.	FALSE	AluJb	SINE,Alu
chr2	143638992	T	A	0.00089	KYNU	+	FALSE
chr1	145282799	G	A	0.00915	NBPF20,NOTCH2NL	+	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr1	117531813	T	C	0.00751	PTGFRN	+	FALSE
chr1	148023067	C	T	0.00772	NBPF8	-	FALSE
chr6	24720534	T	C	0.00053		.	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	17733531	G	A	0.00223	RCC2	-	FALSE
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr2	70452146	T	G	0.00192	TIA1	-	FALSE
chr4	165998714	T	C	0.00254	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	27248275	C	T	0.00047	NUDC	+	FALSE
chr2	99812864	A	G	0.00810	MRPL30	+	TRUE	AluJb	SINE,Alu
chrX	118920477	A	T	0.00529	RPL39	-	FALSE
chr1	145688664	A	T	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr1	46159809	T	A	0.00605	TMEM69	+	FALSE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr1	145281613	C	A	0.00979	NBPF20,NOTCH2NL	+	FALSE
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr1	93617546	T	C	0.00026	TMED5	-	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	32793185	C	T	0.00015	HDAC1	+	FALSE
chr2	191745652	A	T	1.16463E-05	GLS	+	FALSE
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr13	20224387	A	G	0.00959	MPHOSPH8	+	FALSE
chr2	202028727	A	G	0.00833	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr1	16913612	G	A	0.00581	NBPF1	-	FALSE
chr9	139299673	G	C	0.00710	SDCCAG3	-	FALSE
chr1	1152310	C	T	0.00133	SDF4	-	FALSE
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	200375846	G	T	0.00040	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	160967816	T	C	0.00025	F11R	-	TRUE	AluSp	SINE,Alu
chr3	107526033	T	A	0.00056	BBX	+	FALSE
chr10	13320110	T	C	0.00193	PHYH	-	FALSE
chr1	204526795	A	G	0.00199	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	28825418	A	G	0.00961	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr12	133298255	A	G	0.00016	PGAM5	+	TRUE	AluSp	SINE,Alu
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	36067760	T	C	1.59237E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	93602673	C	T	0.00252	MTF2	+	FALSE
chr1	212114663	G	A	0.00858	INTS7	-	FALSE
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr1	109475427	T	C	0.00185	GPSM2,CLCC1	+,-	FALSE
chr2	37327662	T	C	9.50751E-10		.	FALSE
chr4	79447807	G	C	0.00339	FRAS1	+	FALSE
chr1	53291420	A	G	0.00069	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	327538	A	G	0.00010		.	FALSE
chr2	74645427	A	G	0.00011	C2orf81	-	FALSE
chr6	116600810	G	A	0.00028	DSE,TSPYL1	+,-	FALSE
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr1	144932151	G	T	0.00294	NBPF20,PDE4DIP	+,-	FALSE
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr3	184766301	T	C	0.00648	VPS8	+	FALSE
chr1	36068276	T	C	0.00110	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	98090610	T	C	0.00832	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	109475635	T	C	0.00458	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr2	55462102	A	G	0.00026	RPS27A	+	FALSE
chr1	213069783	A	G	0.00600	FLVCR1	+	FALSE
chr1	31732677	G	A	0.00353	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr1	16893813	A	G	0.00385	NBPF1	-	FALSE
chr4	10099340	T	C	0.00000	WDR1	-	FALSE
chr1	38326661	T	C	0.00023	INPP5B	-	TRUE	AluJr	SINE,Alu
chr5	102345546	A	C	0.00463	PAM	+	FALSE
chr1	36794250	A	G	0.00324		.	FALSE	AluJb	SINE,Alu
chr1	45279898	C	T	0.00271		.	FALSE	(TCTT)n	SINE,Alu
chr1	78142985	T	C	0.00012	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	27992824	G	A	0.00025	IFI6	-	FALSE
chr22	21304408	A	G	0.00967	CRKL	+	FALSE
chr4	190883001	C	G	0.00319	FRG1	+	FALSE
chr1	224380498	A	G	6.58460E-05	DEGS1	+	TRUE	AluSx	SINE,Alu
chr1	16133914	T	C	0.00156	UQCRHL	-	TRUE
chr2	37330576	T	C	0.00055		.	FALSE	AluSq2	SINE,Alu
chr17	57656854	C	T	0.00928	DHX40	+	FALSE
chr2	37327702	T	C	0.00519		.	FALSE
chr1	16842064	A	C	0.00081		.	FALSE	MER41E	SINE,Alu
chr2	207942527	A	T	0.00107	KLF7	-	FALSE
chr1	203839213	T	A	0.00800	SNRPE	+	FALSE
chr6	34213986	T	A	0.00262	HMGA1	+	FALSE
chr1	144594232	C	T	2.29859E-05	NBPF20	+	FALSE
chr4	17802919	T	C	0.00857	DCAF16	-	TRUE	AluSz	SINE,Alu
chr6	159395409	T	C	0.00136		.	FALSE
chr4	39551976	T	C	0.00041	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr6	13790931	T	C	0.00122	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr5	118811533	G	A	0.00781	HSD17B4	+	FALSE
chr1	28662157	A	G	0.00159	MED18	+	TRUE	AluSq2	SINE,Alu
chr4	155457049	T	A	0.00434	PLRG1	-	FALSE	L2d2	SINE,Alu
chr14	19686329	G	A	0.00117	DUXAP10	+	FALSE
chr3	160213318	T	G	0.00215	KPNA4	-	FALSE
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	114443618	A	G	0.00910	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr2	37331750	T	C	0.00067		.	FALSE	AluJb	SINE,Alu
chr1	65900357	G	T	0.00851	LEPR,LEPROT	+	FALSE
chr10	119766673	T	G	0.00082	RAB11FIP2	-	FALSE
chr1	149818441	T	C	0.00773		.	FALSE	MLT1D	SINE,Alu
chr1	39305021	G	T	0.00027	RRAGC	-	FALSE
chr1	3545191	C	T	0.00165	TPRG1L	+	FALSE
chr1	1718810	G	A	5.85228E-05	GNB1	-	FALSE
chr1	10518616	G	A	0.00379		.	FALSE	AluSx1	SINE,Alu
chr2	242384368	G	A	0.00096	FARP2	+	FALSE	AluJr	SINE,Alu
chr1	25170760	T	A	0.00975	CLIC4	+	FALSE
chr1	10520487	T	C	0.00559		.	FALSE	AluSx1	SINE,Alu
chr14	53109677	T	C	5.62031E-05	ERO1A	-	FALSE
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr2	55516936	A	T	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	9330479	C	T	0.00027	H6PD	+	FALSE
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	19586501	A	G	5.42567E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr7	156764972	G	A	0.00871	NOM1	+	FALSE
chr1	28836974	A	G	9.88453E-07	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr2	37330611	T	C	0.00835		.	FALSE	AluSq2	SINE,Alu
chr1	16534255	C	G	0.00980	ARHGEF19	-	FALSE
chr10	73994158	A	G	0.00110	ANAPC16	+	TRUE	AluJr	SINE,Alu
chr1	24935369	A	G	0.00454	NCMAP	+	TRUE	AluJb	SINE,Alu
chr5	154194456	G	C	0.00831	LARP1	+	FALSE
chr1	6282315	T	C	0.00508	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	191184475	A	G	0.00895	HIBCH	-	FALSE
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr1	100150196	A	G	0.00176	PALMD	+	TRUE	AluJr	SINE,Alu
chr19	53914819	A	G	5.13713E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	36770605	C	T	0.00971	THRAP3	+	FALSE	(T)n	SINE,Alu
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr1	10517635	T	C	7.30839E-07		.	FALSE	AluSx1	SINE,Alu
chr2	74349080	A	G	0.00094		.	FALSE	AluSz	SINE,Alu
chr1	1650787	T	C	0.00071	CDK11B,CDK11A	-	FALSE
chr5	6372180	C	T	0.00034	MED10	-	FALSE
chr1	148556107	A	T	0.00288		.	FALSE
chr3	178740415	G	A	0.00227	ZMAT3	-	FALSE
chr17	73885939	T	C	0.00612	TRIM65	-	TRUE	AluJr	SINE,Alu
chr2	121749583	T	C	0.00120	GLI2	+	FALSE
chr1	1597403	C	T	0.00033	CDK11B,SLC35E2B	-	FALSE
chr3	33138549	G	A	2.02580E-06	GLB1	-	FALSE
chr2	217366499	A	G	0.00063		.	FALSE	AluSz	SINE,Alu
chr3	44791062	T	C	0.00014	KIAA1143	-	FALSE
chr1	149943157	G	A	0.00024	OTUD7B	-	FALSE
chr1	75175797	G	A	0.00203	CRYZ	-	FALSE
chr2	31423365	G	T	4.32087E-05	CAPN14	-	FALSE
chr18	24127008	T	G	0.00800	KCTD1	-	FALSE	(TGG)n	SINE,Alu
chr5	70952934	C	T	0.00315	MCCC2	+	FALSE	MIR	SINE,Alu
chr22	18571431	A	G	0.00158	PEX26	+	TRUE	AluSz	SINE,Alu
chr2	46414708	G	A	0.00173	PRKCE	+	FALSE
chr1	10043363	A	G	0.00509	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr20	57603729	A	T	0.00444		.	FALSE
chr1	52520892	A	C	0.00292	TXNDC12	-	FALSE
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr1	138156	G	T	0.00048	LOC729737	-	FALSE
chr1	36068276	T	C	5.36857E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	49067809	T	A	0.00022	QRICH1	-	FALSE
chr5	137754695	T	C	0.00266	KDM3B	+	FALSE
chr1	1252652	T	C	0.00219	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	77759578	A	G	4.05543E-05	AK5	+	FALSE
chr1	6283439	T	C	0.00786	ICMT	-	TRUE	AluSx3	SINE,Alu
chr6	150047370	T	C	0.00084	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	1650832	A	G	0.00065	CDK11B,CDK11A	-	FALSE
chr1	10518756	T	C	0.00600		.	FALSE	AluSx1	SINE,Alu
chr8	11701458	T	C	1.82355E-06	CTSB	-	TRUE	AluSx1	SINE,Alu
chr16	48388382	A	G	0.00301	MIR5095	+	TRUE	AluSz	SINE,Alu
chr12	133298937	A	G	0.00240	PGAM5	+	TRUE	AluSg	SINE,Alu
chr2	46612340	G	T	0.00094	EPAS1	+	FALSE
chr2	206986949	T	C	0.00693		.	FALSE	AluJr	SINE,Alu
chr2	217366195	C	A	0.00929		.	FALSE
chr1	900720	A	T	0.00711	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	16958064	A	G	2.44983E-05		.	FALSE
chr3	16357494	G	A	2.87472E-06	RFTN1	-	FALSE
chr2	202252539	G	A	0.00293	TRAK2	-	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr1	65298626	T	A	0.00580	RAVER2	+	FALSE	X12_DNA	SINE,Alu
chr1	6282383	T	C	0.00371	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr2	176042866	A	T	0.00596	ATP5G3	-	FALSE
chr4	110635488	G	T	8.00508E-05	PLA2G12A	-	FALSE
chr1	10517659	T	C	0.00012		.	FALSE	AluSx1	SINE,Alu
chr1	144874760	T	C	0.00267	NBPF20,PDE4DIP	+,-	FALSE
chr7	36447358	G	C	0.00838	ANLN	+	FALSE
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr2	203426264	C	T	0.00948	BMPR2	+	FALSE
chr1	10517659	T	C	0.00516		.	FALSE	AluSx1	SINE,Alu
chr10	120795222	A	T	0.00193	EIF3A	-	FALSE
chr1	19984109	T	G	0.00872	MINOS1-NBL1,NBL1	+	FALSE
chr1	160966376	T	C	0.00996	F11R	-	TRUE	AluSg	SINE,Alu
chr3	160154971	T	C	0.00820	TRIM59	-	FALSE	AluJb	SINE,Alu
chr4	54244053	G	C	0.00726	FIP1L1	+	FALSE	(CGGAG)n	SINE,Alu
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	53359182	A	G	0.00321	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr1	156495521	C	A	0.00097	IQGAP3	-	FALSE

RBP	NIP7
Knock-Method	shRNA
RBP Family	UPF0113
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR696LLZ
Platform	HiSeq
Pubmed ID	32252787

NIP7 - Target Gene Network