RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	1246979	G	T	0.00168	PUSL1,CPSF3L	+,-	FALSE
chr6	42857111	A	G	0.00681	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr12	133389998	T	C	0.00829	GOLGA3	-	FALSE
chr1	93803522	T	C	0.00163	CCDC18-AS1	-	TRUE	AluJr	SINE,Alu
chr3	179117270	T	C	0.00478	GNB4	-	TRUE	AluSz	SINE,Alu
chr19	7084578	A	G	0.00346	ZNF557	+	TRUE	AluJb	SINE,Alu
chr4	56291623	G	T	0.00490	TMEM165	+	FALSE
chr1	161088583	T	G	0.00745	NIT1	+	FALSE
chr3	53260620	T	G	0.00069	TKT	-	FALSE
chr1	10517313	T	C	0.00305		.	FALSE	AluJr	SINE,Alu
chr1	148594563	G	T	0.00169	NBPF15	+	FALSE
chr1	10520984	G	T	0.00305	DFFA	-	FALSE	AluY	SINE,Alu
chr2	58387000	C	T	0.00027	VRK2,FANCL	+,-	FALSE
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	36388197	C	T	0.00315	AGO1	+	FALSE
chr3	66419942	A	G	0.00284	SLC25A26	+	FALSE
chr4	160280309	G	T	0.00770	RAPGEF2	+	FALSE	(T)n	SINE,Alu
chr1	214529247	T	C	0.00233	PTPN14	-	TRUE
chr1	12071680	A	G	5.54475E-07	MFN2	+	FALSE
chr1	179042482	A	G	0.00301	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	114443609	A	G	0.00035	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr3	9829171	G	A	0.00730	TADA3	-	FALSE
chr19	12742290	A	G	0.00564		.	FALSE	AluSx	SINE,Alu
chr1	567557	A	G	0.00649		.	FALSE
chr1	6583097	T	C	0.00022	NOL9	-	TRUE	AluSx4	SINE,Alu
chr7	6442892	C	A	0.00675	RAC1	+	FALSE
chr1	36602178	A	T	0.00764	TRAPPC3	-	FALSE
chr8	17087341	C	A	0.00197	CNOT7	-	FALSE
chr4	152020780	C	T	0.00925	RPS3A	+	FALSE
chr1	206579798	T	C	0.00476	SRGAP2	+	FALSE
chr17	57281069	A	G	0.00278	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chr1	85718132	C	A	0.00738	C1orf52	-	FALSE
chr2	201774279	T	C	9.55391E-05		.	FALSE	AluSz	SINE,Alu
chr1	53289790	C	T	0.00281	ZYG11B	+	FALSE	AluSz	SINE,Alu
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr1	156613401	T	C	5.47226E-05	BCAN	+	FALSE
chr7	137561084	G	A	0.00194	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr4	17804847	T	C	0.00512	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	180854783	T	C	0.00292	XPR1	+	FALSE
chr6	36894337	G	A	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr2	71411977	T	A	0.00468	PAIP2B	-	FALSE
chr3	150262002	G	T	0.00016	SERP1	-	FALSE
chr7	129472355	G	C	0.00246	UBE2H	-	FALSE
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr2	98272734	A	G	0.00996	ACTR1B	-	FALSE
chr17	8286136	T	A	0.00706	RPL26	-	FALSE
chr5	150827307	G	T	0.00708	SLC36A1	+	FALSE
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr19	1037984	T	C	0.00908	CNN2	+	FALSE	(TT)n	SINE,Alu
chr3	33458266	T	C	0.00035	UBP1	-	FALSE
chr1	206566195	C	T	0.00706	SRGAP2	+	FALSE
chr12	29493734	C	T	0.00163	ERGIC2	-	FALSE
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	214524576	T	C	0.00337	PTPN14	-	TRUE	AluSg	SINE,Alu
chr14	20923558	A	C	0.00373	APEX1	+	FALSE
chr1	36522603	A	G	0.00012		.	FALSE	AluSc	SINE,Alu
chr1	138156	G	T	0.00048	LOC729737	-	FALSE
chr4	68484330	G	A	0.00131	UBA6	-	FALSE
chr1	118408218	C	A	0.00857	GDAP2	-	FALSE
chr1	24134721	T	C	0.00113	HMGCL	-	FALSE
chr19	53914411	A	G	8.16883E-05	ZNF765	+	TRUE	AluSx	SINE,Alu
chr7	55266417	T	C	0.00201	EGFR	+	FALSE
chr3	195243012	A	C	0.00128	PPP1R2	-	FALSE
chr7	158679732	G	A	0.00456	WDR60	+	FALSE
chr3	48787633	T	C	0.00287	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr5	122165482	C	T	0.00367	SNX2	+	FALSE	(AC)n	SINE,Alu
chr3	5258431	G	A	3.44849E-09	EDEM1	+	FALSE
chr11	68523016	T	C	0.00016	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	36770601	G	T	0.00055	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	84971969	G	T	0.00626	GNG5	-	FALSE
chr1	26608015	T	A	3.80922E-07		.	FALSE
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chrX	2825075	T	C	0.00410	ARSD	-	TRUE	AluSx1	SINE,Alu
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr1	90478690	A	C	0.00035	ZNF326	+	FALSE
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr1	9160989	T	C	0.00183		.	FALSE	AluJb	SINE,Alu
chr1	113000565	A	G	0.00216	CTTNBP2NL	+	FALSE
chr4	42022464	C	A	0.00438	SLC30A9	+	FALSE
chr7	128167988	T	C	0.00290		.	FALSE	AluSg	SINE,Alu
chr3	14526656	A	G	0.00189	SLC6A6	+	FALSE
chr1	220231330	T	C	0.00427	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr2	44459528	G	A	0.00100	PPM1B	+	FALSE
chr3	121382204	C	T	0.00309	GOLGB1	-	FALSE
chr1	110951224	A	G	0.00352	LAMTOR5-AS1	+	TRUE	AluJr	SINE,Alu
chr1	59004766	G	T	0.00213	OMA1	-	FALSE
chr3	178741082	A	C	5.87013E-06	ZMAT3	-	FALSE
chr4	152583924	A	T	0.00284	FAM160A1	+	FALSE
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr5	125961532	A	G	0.00039	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	24128467	C	T	0.00086	HMGCL	-	FALSE
chr1	1534826	C	T	0.00382	FNDC10	-	FALSE
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr5	74063154	C	G	0.00255	GFM2,NSA2	+,-	FALSE
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr3	183534170	C	T	0.00090	MAP6D1	-	FALSE
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	148556726	G	T	0.00023		.	FALSE
chr1	154128827	A	T	0.00724	TPM3	-	FALSE
chr1	203277244	A	G	0.00115	BTG2	+	FALSE
chr1	144053661	T	G	0.00232		.	FALSE
chr7	6066461	T	C	2.08606E-05	EIF2AK1	-	FALSE
chr14	19687172	C	T	0.00389	DUXAP10	+	FALSE
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr17	38632679	T	G	0.00044	TNS4	-	FALSE	(GT)n	SINE,Alu
chr4	24801315	G	A	9.79732E-09	SOD3	+	FALSE
chr1	28826128	A	G	0.00060	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr4	129795661	A	T	0.00165	JADE1	+	FALSE
chr1	19542463	T	C	0.00182	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144828795	C	G	0.00887	NBPF20,NBPF9	+	FALSE
chr20	54943385	C	A	0.00844	FAM210B	+	FALSE
chr12	125513788	A	G	0.00592		.	FALSE	AluSx1	SINE,Alu
chr1	168220489	A	G	0.00319		.	FALSE	AluSz6	SINE,Alu
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr9	36216895	T	C	0.00130	GNE	-	TRUE	AluY	SINE,Alu
chr1	169101273	T	G	0.00522	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr3	158547143	G	A	0.00178	MFSD1	+	FALSE
chr3	14175262	T	C	3.06250E-10	TMEM43	+	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr3	10168785	T	C	0.00198	BRK1	+	FALSE
chr1	36068276	T	C	5.36857E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	46075664	A	G	0.00045	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	145369354	C	T	0.00872	NBPF20,NBPF10	+	FALSE
chr1	179326588	A	G	0.00563	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	168218660	A	G	0.00296		.	FALSE	AluSz	SINE,Alu
chr1	204393480	T	A	0.00783	PIK3C2B	-	FALSE
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr15	63363384	C	A	0.00161	TPM1	+	FALSE
chr3	63996227	G	T	0.00114	PSMD6-AS2,PSMD6	+,-	FALSE
chr11	63394016	T	C	0.00106	ATL3	-	FALSE
chr1	10520672	T	C	0.00584	DFFA	-	TRUE	AluSc8	SINE,Alu
chrX	77084038	T	C	0.00265	MAGT1	-	TRUE	AluSz	SINE,Alu
chr3	149237753	G	A	2.17555E-05	WWTR1	-	FALSE	AluSq2	SINE,Alu
chr1	95362949	A	T	0.00012	CNN3	-	FALSE	(A)n	SINE,Alu
chr5	43377330	T	C	0.00039	CCL28	-	TRUE	AluSz	SINE,Alu
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	21795388	A	G	0.00790	NBPF3	+	FALSE
chrX	3523061	C	G	0.00023	PRKX	-	FALSE	(AC)n	SINE,Alu
chr2	39212563	G	T	9.15843E-06	SOS1	-	FALSE
chr19	57816349	A	G	8.96695E-06		.	FALSE	AluY	SINE,Alu
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr7	74169234	G	T	8.95897E-05	GTF2I	+	FALSE
chr2	20818330	T	C	0.00228	HS1BP3	-	TRUE
chr1	16892938	T	C	0.00569	NBPF1	-	FALSE
chr16	10624953	T	C	0.00056	EMP2	-	TRUE	AluSx3	SINE,Alu
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr1	23240255	G	A	0.00873	EPHB2	+	FALSE
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr4	3769307	C	A	0.00173	ADRA2C	+	FALSE
chr1	1622754	A	G	0.00221	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr2	204162597	A	G	0.00296	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr3	45721891	A	G	0.00356	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	144852476	T	C	0.00735	NBPF20,PDE4DIP	+,-	FALSE
chr1	116609833	G	A	0.00773	SLC22A15	+	FALSE
chr15	41593308	A	G	0.00619		.	FALSE	AluSz6	SINE,Alu
chr1	52816674	T	C	1.79626E-07	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr1	6282420	T	C	0.00133	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	33148706	A	G	0.00050	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	26801762	G	T	0.00762	HMGN2	+	FALSE
chr4	57327022	A	G	0.00057	PAICS	+	TRUE	AluSx1	SINE,Alu
chr10	115526177	A	G	0.00237	PLEKHS1	+	FALSE
chr9	131457814	G	A	0.00021	SET	+	FALSE
chr10	124815149	C	G	0.00993	ACADSB	+	FALSE	THE1A-int	SINE,Alu
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr1	1234671	G	A	0.00100	ACAP3	-	FALSE
chr1	100489571	G	A	1.40531E-05	SLC35A3	+	FALSE	AluSc	SINE,Alu
chrX	152916235	G	A	0.00015	DUSP9	+	FALSE
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr5	149363218	A	G	0.00233	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr2	230876757	G	C	0.00321	FBXO36	+	FALSE
chr6	160526904	T	G	0.00027	IGF2R	+	FALSE
chr16	1411034	A	G	0.00322	GNPTG	+	TRUE	AluSz	SINE,Alu
chr1	10520130	T	C	0.00355		.	FALSE	AluSx	SINE,Alu
chr5	53840199	G	T	0.00857	SNX18	+	FALSE
chr3	5257975	A	T	9.78592E-05	EDEM1	+	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr1	120162787	T	C	0.00925	ZNF697	-	FALSE
chr1	143399333	T	A	0.00339		.	FALSE	L1MC4	SINE,Alu
chr2	37331750	T	C	1.79348E-08		.	FALSE	AluJb	SINE,Alu
chr3	196670090	G	A	6.78352E-09	NCBP2-AS2	+	FALSE
chr1	113212976	C	T	0.00904	CAPZA1	+	FALSE
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr1	19543457	T	C	0.00143	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	22109952	G	A	0.00889		.	FALSE
chr1	138356	C	A	0.00481	LOC729737	-	FALSE
chr4	42089177	G	A	0.00447	SLC30A9	+	FALSE
chr12	133297974	A	G	6.19654E-10	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	182353198	A	T	0.00985	GLUL	-	FALSE
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr13	21547673	G	A	0.00974	LATS2	-	FALSE	(TG)n	SINE,Alu
chr2	11323079	T	A	0.00586	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr16	15198598	C	T	0.00494	PDXDC1,PKD1P6-NPIPP1,LOC100505915	+,-	FALSE
chr1	32373854	A	T	0.00096	PTP4A2	-	FALSE
chr1	1597403	C	T	0.00912	CDK11B,SLC35E2B	-	FALSE
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr4	39552174	T	C	0.00026	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	226333558	A	C	0.00052	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr3	44791293	A	T	0.00031	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr3	176739580	T	C	4.09936E-06	TBL1XR1	-	FALSE
chr1	145689566	A	G	0.00331	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr2	204301757	C	T	0.00999	RAPH1	-	FALSE
chr8	145159712	A	G	0.00402	MAF1	+	FALSE
chr19	21474857	T	C	0.00131	ZNF708	-	TRUE	AluSc	SINE,Alu
chr15	35272171	T	C	0.00183	ZNF770	-	FALSE
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr10	101563815	G	A	0.00218	ABCC2	+	FALSE
chr2	64687665	C	A	0.00976	LGALSL	+	FALSE
chr1	53289873	A	G	0.00013	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr14	53242639	T	C	1.43651E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr16	2821028	G	T	9.74054E-05	SRRM2	+	FALSE
chr7	100271438	G	T	0.00460	GNB2	+	FALSE
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr3	196659892	T	G	0.00620	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	1344893	A	G	0.00186		.	FALSE	AluSg	SINE,Alu
chr4	57326156	A	G	0.00230	PAICS	+	TRUE	AluJr	SINE,Alu
chr14	76671382	A	G	0.00777	GPATCH2L	+	TRUE	AluJr4	SINE,Alu
chr1	6283306	T	C	0.00047	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	36614708	C	T	0.00201	TRAPPC3	-	FALSE
chr17	48771489	T	A	0.00101	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr3	133307637	G	T	0.00092	CDV3	+	FALSE
chr9	119162301	A	T	0.00778	PAPPA,PAPPA-AS1	+,-	FALSE	(GAAA)n	SINE,Alu
chr1	10517290	T	C	0.00119		.	FALSE	AluJr	SINE,Alu
chr2	216903544	T	C	0.00929	PECR	-	TRUE	AluSx3	SINE,Alu
chr3	10290508	C	T	0.00682	TATDN2	+	FALSE
chr1	29095757	G	T	0.00739	YTHDF2	+	FALSE
chr1	20977913	T	G	0.00201	PINK1,PINK1-AS	+,-	FALSE
chr1	148951398	C	T	0.00068	LOC645166	+	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr1	36642420	T	C	0.00188	MAP7D1	+	FALSE
chr22	22050366	T	C	0.00449	PPIL2	+	FALSE	MER5A	SINE,Alu
chr11	94801637	T	C	0.00726	SRSF8	+	FALSE
chr10	101992783	T	C	0.00313	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr2	61277463	A	G	0.00826	PEX13	+	TRUE	AluSx	SINE,Alu
chr2	46612340	G	T	3.13955E-05	EPAS1	+	FALSE
chr3	160213317	T	A	0.00208	KPNA4	-	FALSE
chr2	9629304	A	G	0.00121	ADAM17	-	FALSE
chr11	19245854	T	C	0.00078	E2F8	-	FALSE
chr1	36770073	A	T	4.33965E-05	THRAP3	+	FALSE
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr14	50713578	T	C	0.00260	L2HGDH	-	TRUE	AluSx	SINE,Alu
chr21	37789499	A	G	0.00889		.	FALSE	AluJb	SINE,Alu
chr1	115248084	C	T	0.00171	NRAS	-	FALSE
chr1	95392593	C	T	0.00173	CNN3	-	FALSE	(GGCGCG)n	SINE,Alu
chr2	99812857	A	G	0.00040	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	1653093	A	G	0.00768	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	148556087	G	C	0.00486		.	FALSE
chr1	150783968	T	A	0.00368	ARNT	-	FALSE
chr8	17089564	T	C	0.00165	CNOT7	-	FALSE
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr1	100549715	T	A	0.00765	SASS6	-	FALSE
chr2	37429626	A	G	0.00028	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr1	145273345	T	C	0.00640	NBPF20,NOTCH2NL	+	FALSE
chr1	46075661	A	G	0.00071	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr7	65844563	G	A	0.00581	LINC00174	-	FALSE
chr1	67468124	G	C	0.00201	SLC35D1	-	FALSE
chr14	95555551	C	T	0.00404	DICER1	-	FALSE
chr7	102004748	T	C	0.00050	LOC100289561,LOC100630923	+	FALSE
chr14	93712365	A	G	0.00210	BTBD7	-	FALSE
chr1	38326547	C	T	0.00212	INPP5B	-	FALSE	AluJr	SINE,Alu
chr2	9629954	T	C	0.00802	ADAM17	-	FALSE
chr3	105295461	G	A	9.74520E-12	ALCAM	+	FALSE
chr1	6583066	T	C	0.00209	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	40214313	A	G	0.00330	PPIE	+	TRUE	AluSq2	SINE,Alu
chr11	490771	C	T	0.00600	PTDSS2	+	FALSE
chr1	16893813	A	G	0.00385	NBPF1	-	FALSE
chr6	33679439	A	C	0.00192	UQCC2	-	FALSE
chr1	6282224	T	C	0.00062	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	52448770	A	G	0.00498	PHF7	+	TRUE	AluJb	SINE,Alu
chr1	204095426	C	T	0.00481	SOX13	+	FALSE
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr4	39551087	T	C	0.00263	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	65432447	C	T	0.00486		.	FALSE
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr1	145693958	A	G	3.55543E-06	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr2	37327702	T	C	0.00989		.	FALSE
chr1	144852203	T	G	0.00518	NBPF20,PDE4DIP	+,-	FALSE
chr3	88199298	T	C	0.00112	C3orf38	+	FALSE
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chrX	77083116	T	C	0.00658	MAGT1	-	TRUE	AluSg	SINE,Alu
chr1	154438084	C	T	0.00561	IL6R	+	FALSE
chr1	36851360	G	A	0.00578	STK40	-	FALSE
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr1	78187733	G	A	0.00388	USP33	-	FALSE
chr19	11560438	A	G	7.61449E-05	PRKCSH	+	FALSE	AluSx	SINE,Alu
chr1	118502087	C	T	0.00585	WDR3,SPAG17	+,-	FALSE
chr1	53289860	A	G	0.00346	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr12	133314509	T	C	0.00229	ANKLE2	-	TRUE	AluJr	SINE,Alu
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr17	61502460	T	A	0.00161	TANC2	+	FALSE
chr6	42856156	A	G	0.00190	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr4	38946481	A	G	0.00168	FAM114A1	+	FALSE	MER1B	SINE,Alu
chr7	2768626	C	T	0.00228	AMZ1,GNA12	+,-	FALSE
chr2	61764098	A	C	0.00112	XPO1	-	FALSE
chr12	125511961	A	G	1.08093E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr14	36784095	C	T	0.00866	MBIP	-	FALSE
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr2	37429737	A	G	3.16512E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	109192040	T	C	6.39517E-05	HENMT1	-	TRUE	AluJr	SINE,Alu
chr5	122359494	G	C	0.00043	PPIC	-	FALSE
chr1	21940555	C	T	0.00067	RAP1GAP	-	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr3	176739159	A	C	0.00304	TBL1XR1	-	FALSE
chr1	11979814	G	A	0.00697	KIAA2013	-	FALSE
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr1	144828857	C	G	4.37583E-07	NBPF20,NBPF9	+	FALSE
chr1	161932324	A	G	0.00056	ATF6	+	FALSE
chr1	6282371	T	C	0.00897	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16912099	G	C	0.00928	NBPF1	-	FALSE
chr1	119574537	G	A	0.00783	WARS2	-	FALSE
chr7	21941587	G	C	5.72060E-05	CDCA7L	-	FALSE
chr4	129796173	G	T	1.40481E-05	JADE1	+	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr1	116239368	G	A	5.97604E-05	VANGL1	+	FALSE
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr9	115446747	T	C	0.00648	INIP	-	TRUE	AluJr	SINE,Alu
chr1	145369706	T	C	0.00186	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	16913612	G	A	0.00581	NBPF1	-	FALSE
chr1	203771852	G	T	0.00883	ZC3H11A	+	FALSE	(T)n	SINE,Alu
chr1	78483452	C	T	0.00094	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr1	148023067	C	T	0.00772	NBPF8	-	FALSE
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr1	205111761	A	C	0.00497	DSTYK	-	FALSE
chr1	35650022	C	A	0.00762	SFPQ	-	FALSE
chr1	59124223	G	A	0.00327	MYSM1	-	FALSE	MIR3	SINE,Alu
chr3	156259340	T	C	0.00070	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	196078364	G	A	0.00290		.	FALSE	GA-rich	SINE,Alu
chr15	44055281	T	C	0.00580	PDIA3	+	FALSE
chr1	36067925	T	C	2.33961E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr19	17412218	C	T	0.00790	ABHD8	-	FALSE
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr5	21883662	T	G	0.00108	CDH12	-	FALSE
chr1	94351064	A	T	0.00620	GCLM	-	FALSE
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr8	124262075	G	T	7.79989E-05	ZHX1-C8orf76,ZHX1	-	FALSE
chr1	1595500	T	C	0.00482	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	10517653	T	C	0.00256		.	FALSE	AluSx1	SINE,Alu
chr8	30536146	T	C	1.15312E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr4	10443061	G	T	0.00057	ZNF518B	-	FALSE
chr4	88814756	C	T	0.00145		.	FALSE
chr4	73923043	T	C	0.00236	COX18	-	TRUE	AluSz	SINE,Alu
chr7	44842429	T	G	0.00384	PPIA	+	FALSE
chr1	28836975	A	G	0.00023	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	205129319	G	A	0.00177	DSTYK	-	FALSE
chr1	114306374	G	A	0.00124	RSBN1	-	FALSE
chr1	94351063	A	T	0.00907	GCLM	-	FALSE
chr1	53289688	A	G	0.00059	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr4	2940165	T	C	0.00201	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr6	13790848	T	C	0.00344	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	20826790	T	C	0.00208	MUL1	-	FALSE
chr1	19586458	A	G	0.00029	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr2	70316299	C	A	0.00650	PCBP1	+	FALSE
chr12	123347005	T	A	0.00268	HIP1R	+	FALSE
chr1	19934839	A	G	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	51822219	G	A	0.00017	EPS15	-	FALSE
chr1	9328094	A	G	0.00107	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	118502732	C	T	0.00151	WDR3,SPAG17	+,-	FALSE
chr4	37953902	T	C	0.00109	TBC1D1	+	FALSE
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr19	19793709	A	G	0.00700	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr2	206986245	T	C	0.00304		.	FALSE	AluSz	SINE,Alu
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr2	206983138	T	C	0.00669		.	FALSE	AluJb	SINE,Alu
chr7	29960462	G	A	5.89775E-06	SCRN1	-	FALSE
chr1	229586611	T	C	0.00794	NUP133	-	TRUE	AluSz	SINE,Alu
chr1	9328213	A	G	0.00404	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr1	160966352	T	C	1.19601E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr15	59428230	G	A	0.00891	MYO1E	-	FALSE	MLT1B	SINE,Alu
chr1	36770045	T	C	0.00943	THRAP3	+	FALSE
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr4	17488286	T	G	0.00027	QDPR	-	FALSE
chr1	148556753	G	A	0.00472		.	FALSE
chr2	72968436	G	C	0.00171	EXOC6B	-	FALSE
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr3	141668758	T	C	2.84489E-05	TFDP2	-	TRUE	AluSz	SINE,Alu
chr1	16932144	A	C	7.50683E-06	NBPF1	-	FALSE
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr5	37290492	T	C	8.25709E-07		.	FALSE	AluSz	SINE,Alu
chr7	102090451	A	G	0.00360	ORAI2	+	TRUE	AluSz	SINE,Alu
chr2	36704033	T	A	0.00012	CRIM1	+	FALSE
chr1	16384843	G	C	0.00049	FAM131C	-	FALSE
chr6	150045919	T	C	0.00206	NUP43	-	TRUE	AluSq	SINE,Alu
chr17	7482018	C	A	9.29146E-05	SENP3-EIF4A1,EIF4A1	+	FALSE
chr1	16889014	C	T	0.00722	NBPF1	-	FALSE
chr1	3545191	C	T	0.00597	TPRG1L	+	FALSE
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr1	28662057	A	G	3.94650E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	144931727	G	A	0.00037	NBPF20,PDE4DIP	+,-	FALSE
chr1	89225976	T	C	0.00586	PKN2	+	FALSE
chr8	143763618	C	G	0.00421	PSCA	+	FALSE
chr8	101932094	T	A	0.00288	YWHAZ	-	FALSE	MER34B-int	SINE,Alu
chr1	205684067	T	C	0.00499	NUCKS1	-	FALSE
chr1	990280	C	T	0.00243	AGRN	+	FALSE
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr1	120286837	A	G	0.00153	PHGDH	+	FALSE
chr2	3502198	T	A	0.00764	ADI1	-	FALSE
chr17	65334766	T	C	4.45484E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr3	58292297	T	C	0.00950	RPP14	+	FALSE
chr2	97884961	G	A	0.00668	ANKRD36	+	FALSE
chr1	38423199	A	T	0.00192	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	54691906	C	G	0.00465	SSBP3	-	FALSE
chr1	28826085	A	G	0.00212	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	90401416	T	C	6.95799E-05	LRRC8D	+	FALSE
chr4	2940430	T	C	2.47251E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	161141432	C	G	0.00508	B4GALT3	-	FALSE
chr1	206566904	T	C	0.00084	SRGAP2	+	FALSE
chr2	3592615	T	C	0.00331	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chrX	84532996	T	G	0.00801	POF1B	-	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr12	98943149	A	G	0.00019	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	19543456	T	C	0.00451	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	3545200	G	A	0.00676	TPRG1L	+	FALSE
chr11	32125961	C	T	0.00118	RCN1	+	FALSE
chr1	220231997	T	C	0.00244	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	32535746	A	G	0.00085		.	FALSE	AluJb	SINE,Alu
chrX	150573750	A	T	0.00887	VMA21	+	FALSE
chr1	162497739	G	C	0.00138	UHMK1	+	FALSE
chr1	204095687	C	A	5.97770E-05	SOX13	+	FALSE
chr1	26143725	A	T	0.00112	SEPN1	+	FALSE	AluSx	SINE,Alu
chrM	10307	A	C	0.00588		.	FALSE
chr5	126171974	C	T	0.00867	LMNB1	+	FALSE
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr2	242447628	T	G	0.00020	STK25	-	FALSE
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr1	36068325	T	C	5.92205E-06	PSMB2	-	TRUE	AluSc	SINE,Alu

RBP	TRA2A
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR916WOI
Platform	HiSeq
Pubmed ID	32252787

TRA2A - Target Gene Network