RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16892256	T	C	0.00468	NBPF1	-	FALSE
chr1	36068184	T	C	0.00177	PSMB2	-	TRUE	AluSc	SINE,Alu
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr2	3622912	G	T	0.00000	RPS7	+	FALSE
chr1	24296869	G	T	0.00973		.	FALSE	AluSg	SINE,Alu
chr17	49042381	T	C	0.00931	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr15	72635903	C	T	0.00334	HEXA	-	FALSE
chr1	230979207	C	A	0.00643	C1orf198	-	FALSE
chrX	77083914	T	C	3.12092E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	54691922	T	A	0.00415	SSBP3	-	FALSE
chr1	148932848	A	G	0.00715	LOC645166	+	FALSE
chr3	155660773	A	G	0.00592		.	FALSE	AluSz	SINE,Alu
chr17	60522250	A	G	0.00267	METTL2A	+	FALSE
chr17	57279257	A	G	0.00362	PRR11	+	TRUE	AluSq2	SINE,Alu
chr3	197611291	A	G	0.00095		.	FALSE	AluSx1	SINE,Alu
chr15	91044385	G	T	0.00440	IQGAP1	+	FALSE
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr1	160112340	A	G	0.00374	ATP1A2	+	TRUE	AluSx3	SINE,Alu
chr3	45722055	A	G	0.00835	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr5	70248476	T	G	0.00273	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr7	102016322	A	G	0.00223	LOC100289561,LOC100630923	+	FALSE
chr2	232028396	A	G	0.00701	PSMD1	+	FALSE
chr3	57542173	C	T	0.00020	PDE12	+	FALSE
chr1	949608	G	A	0.00416	ISG15	+	FALSE
chr1	183105705	G	A	0.00074	LAMC1	+	FALSE
chr1	173457945	G	A	0.00287	PRDX6	+	FALSE
chr16	81064440	A	G	0.00409	CENPN	+	TRUE	AluSg	SINE,Alu
chr7	44841799	A	G	0.00693	PPIA	+	TRUE	AluSx	SINE,Alu
chr4	1228741	G	A	0.00095	CTBP1	-	FALSE
chr2	33007710	C	T	0.00743	TTC27	+	FALSE
chr3	129286413	G	C	2.51503E-06	PLXND1	-	FALSE
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	53291420	A	G	0.00069	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr7	128142691	A	G	0.00017	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr1	150281011	A	G	0.00016	MRPS21	+	TRUE	AluSz	SINE,Alu
chr1	1594977	T	C	0.00344	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	237065326	C	T	0.00376	MTR	+	FALSE
chr2	37327280	A	T	0.00831		.	FALSE	L1MB8	SINE,Alu
chr1	38275432	G	T	0.00536	MTF1	-	FALSE
chr1	27202901	T	C	0.00224		.	FALSE	AluSq2	SINE,Alu
chr6	31379931	G	A	0.00093		.	FALSE
chr10	51026705	C	G	0.00456	PARG	-	FALSE
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr1	149581854	C	A	0.00175	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr1	36534736	A	G	0.00016		.	FALSE	AluJo	SINE,Alu
chr4	17803537	T	C	0.00366	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	16935130	C	T	0.00155	NBPF1	-	FALSE
chr5	290174	C	T	0.00083	PDCD6	+	FALSE
chr1	10517485	T	C	0.00040		.	FALSE	AluSx1	SINE,Alu
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr5	115165591	T	C	0.00407	ATG12	-	TRUE	AluSq2	SINE,Alu
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr1	6314171	G	A	0.00855	GPR153	-	FALSE
chr1	178887208	A	T	0.00239	RALGPS2	+	FALSE
chr1	46075715	A	G	0.00058	NASP	+	TRUE	AluSx4	SINE,Alu
chr12	69237042	A	G	0.00413	MDM2	+	TRUE
chr7	75958140	C	A	0.00090	YWHAG	-	FALSE
chr1	26449340	G	A	0.00711	PDIK1L	+	FALSE
chr7	21941589	T	A	0.00535	CDCA7L	-	FALSE
chr4	190883001	C	G	0.00319	FRG1	+	FALSE
chr7	65992665	T	C	2.17687E-05		.	FALSE	AluJr	SINE,Alu
chr1	28836974	A	G	9.88453E-07	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	95658346	T	A	0.00098	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr2	23918891	C	T	1.03047E-06	KLHL29	+	FALSE
chr1	32372358	C	T	0.00303	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr5	180663941	G	T	0.00166	RACK1	-	FALSE
chr1	9162234	T	C	0.00896		.	FALSE	AluSx	SINE,Alu
chr19	36033460	C	T	0.00622	GAPDHS,TMEM147-AS1	+,-	FALSE
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	91486839	T	C	0.00514	ZNF644	-	FALSE
chr1	205686523	G	T	2.43057E-05	NUCKS1	-	FALSE
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr19	58356376	A	G	0.00061	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr8	101932094	T	A	0.00288	YWHAZ	-	FALSE	MER34B-int	SINE,Alu
chr1	16133987	T	C	0.00830	UQCRHL	-	FALSE
chr7	4802065	C	T	0.00279	FOXK1	+	FALSE
chr2	101622888	T	A	7.56266E-05	RPL31	+	FALSE
chr16	11931208	A	T	0.00316	RSL1D1	-	FALSE
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr2	178406763	T	C	0.00452	AGPS	+	FALSE
chr3	45722287	A	G	0.00197	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr1	8412989	A	G	0.00190	RERE	-	FALSE
chr12	133635613	T	C	0.00805		.	FALSE
chr6	158613393	A	T	0.00108	GTF2H5	+	FALSE
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	20976023	T	C	1.28334E-05	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr3	120115286	T	G	0.00077	FSTL1	-	FALSE
chr3	176739694	T	C	1.91391E-08	TBL1XR1	-	FALSE
chr1	70718276	G	T	0.00836		.	FALSE
chr12	51325280	A	G	0.00370	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr1	36067752	T	C	0.00402	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	17384393	A	G	1.74996E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr1	160967755	C	T	0.00563	F11R	-	FALSE	(T)n	SINE,Alu
chr5	14769103	G	A	0.00104	ANKH	-	FALSE
chr19	19791274	A	G	7.64703E-05	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr8	48890114	A	G	2.61683E-11	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	36031860	G	T	0.00564	NCDN	+	FALSE
chr1	116234083	T	A	0.00477	VANGL1	+	FALSE
chr1	25893927	A	G	0.00081	LDLRAP1	+	FALSE
chr3	181430454	G	A	0.00577	SOX2-OT,SOX2	+	FALSE
chr1	6283439	T	C	0.00786	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	154194476	T	A	0.00611	LARP1	+	FALSE
chrX	135300092	T	C	0.00075	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr2	37331221	T	C	1.68149E-05		.	FALSE	AluSx1	SINE,Alu
chr1	46159823	T	A	0.00474	TMEM69	+	FALSE
chr1	36068275	T	C	0.00625	PSMB2	-	TRUE	AluSc	SINE,Alu
chr15	52601189	C	T	0.00574	MYO5A	-	FALSE
chr3	57548976	A	G	0.00132	PDE12	+	TRUE	FRAM	SINE,Alu
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr3	8922054	T	C	0.00300	RAD18	-	FALSE
chr1	10520117	T	C	0.00999		.	FALSE	AluSx	SINE,Alu
chr1	32373854	A	T	0.00096	PTP4A2	-	FALSE
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr1	114226255	G	A	0.00381	MAGI3	+	FALSE
chr1	21545089	C	T	0.00834	ECE1	-	FALSE	AluSx1	SINE,Alu
chr1	62579758	G	A	0.00250	PATJ	+	FALSE
chr1	118411057	T	G	0.00254	GDAP2	-	FALSE
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr2	48602186	A	G	0.00870	FOXN2	+	FALSE
chr1	228880135	C	T	0.00026	RHOU	+	FALSE
chr1	146647196	T	C	0.00241		.	FALSE	THE1D	SINE,Alu
chr1	54691922	T	A	0.00224	SSBP3	-	FALSE
chr2	143638991	A	C	0.00054	KYNU	+	FALSE
chr5	184393	C	T	0.00228	PLEKHG4B	+	FALSE
chr1	145282904	A	G	0.00308	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr1	19232017	T	G	0.00519	IFFO2	-	FALSE
chr3	48787042	T	C	0.00799	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	99516962	C	A	2.05391E-14	MIR548G	-	FALSE
chr3	45722396	A	G	0.00337	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr3	57743171	C	T	1.04824E-07	SLMAP	+	FALSE
chr2	71411977	T	A	0.00468	PAIP2B	-	FALSE
chr10	119038371	C	T	0.00058	SLC18A2	+	FALSE	(ATTTGGCA)n	SINE,Alu
chr1	145284883	A	G	0.00062	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr1	9162456	T	C	0.00043		.	FALSE	AluSx	SINE,Alu
chr6	114181220	A	G	0.00265	MARCKS	+	FALSE
chr2	128602967	T	G	0.00026		.	FALSE	AluSp	SINE,Alu
chr1	150704633	T	C	0.00080	CTSS	-	TRUE	AluJo	SINE,Alu
chr2	128950491	A	G	0.00043	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	53289686	A	G	0.00063	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	1597403	C	T	0.00033	CDK11B,SLC35E2B	-	FALSE
chr1	46075779	A	G	0.00640	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	1636957	A	T	0.00589	PXDN	-	FALSE
chr1	25812110	T	C	0.00639	TMEM57	+	FALSE
chr1	11783105	A	G	4.69824E-05		.	FALSE	AluSx	SINE,Alu
chr2	120439459	C	A	0.00273	TMEM177	+	FALSE
chr1	145293012	G	A	0.00250	NBPF20	+	FALSE
chr1	145354360	A	C	0.00761	NBPF20,NBPF10	+	FALSE
chr1	38423205	A	G	0.00923	SF3A3	-	FALSE	AluJo	SINE,Alu
chr3	172115589	G	T	0.00435	FNDC3B	+	FALSE
chr7	131241052	A	G	0.00663	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr3	33187831	C	T	6.36740E-05	CRTAP	+	FALSE
chr1	16889663	A	G	0.00392	NBPF1	-	FALSE
chr1	6583457	T	C	9.96562E-05	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	6283260	T	C	0.00125	ICMT	-	TRUE	AluSx3	SINE,Alu
chr4	109542624	G	A	0.00048	RPL34	+	FALSE	MIRb	SINE,Alu
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr16	48387238	A	G	0.00013	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	10519048	T	C	0.00637		.	FALSE	AluSx3	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr9	19376249	G	T	5.55883E-05		.	FALSE
chr1	10520669	T	C	0.00022	DFFA	-	FALSE	AluSc8	SINE,Alu
chr1	1477244	T	C	0.00365	SSU72	-	FALSE
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr15	64657530	T	C	0.00580	KIAA0101	-	TRUE	FLAM_C	SINE,Alu
chr22	50745987	C	G	0.00683	PLXNB2	-	FALSE
chr1	94335333	G	T	0.00258	DNTTIP2	-	FALSE
chr6	7610036	C	A	0.00545	SNRNP48	+	FALSE	L1ME1	SINE,Alu
chr1	114940210	T	G	0.00028	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	45960558	C	T	6.37727E-08	FYCO1	-	FALSE
chr1	3545189	T	G	0.00027	TPRG1L	+	FALSE
chr5	96429362	A	T	0.00907	LIX1	-	FALSE
chr12	125511958	A	G	0.00494	THRIL	-	FALSE	AluSx1	SINE,Alu
chr6	42047553	A	G	0.00359	TAF8	+	TRUE	AluSz6	SINE,Alu
chr12	125511404	A	G	0.00201	THRIL	-	FALSE	AluSx1	SINE,Alu
chr5	79923292	C	G	0.00305	DHFR	-	FALSE	AluJr	SINE,Alu
chr12	7052982	T	G	0.00199	C12orf57	+	FALSE	U7	SINE,Alu
chr1	16932931	C	A	0.00169	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	51873951	G	A	1.40484E-05	EPS15	-	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr13	47345467	G	T	0.00495	ESD	-	FALSE
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	52250837	C	T	0.00017		.	FALSE
chr15	43767774	G	C	0.00057	TP53BP1	-	FALSE
chr1	16812082	A	G	0.00545	CROCCP3	-	FALSE
chr5	139931622	T	A	0.00881	SRA1	-	FALSE
chr1	19543352	T	C	0.00279	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	70503941	C	A	0.00130		.	FALSE
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chr1	145499276	C	T	0.00581	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	1245164	C	T	0.00318	PUSL1	+	FALSE
chr1	200375404	T	G	0.00030	ZNF281	-	FALSE
chr1	949608	G	A	0.00235	ISG15	+	FALSE
chr1	1653046	T	A	0.00686	CDK11B,CDK11A	-	FALSE
chr12	120898553	A	G	0.00233	GATC	+	TRUE	AluY	SINE,Alu
chr9	115447580	T	C	2.95057E-05	INIP	-	TRUE	AluJb	SINE,Alu
chr2	101622700	A	G	0.00387	RPL31	+	FALSE
chr1	190234133	A	C	5.13910E-06	BRINP3	-	FALSE
chr10	71647223	A	C	0.00114	COL13A1	+	FALSE
chr17	65334986	T	C	1.42836E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	226259443	C	A	0.00927	H3F3AP4,H3F3A	+	FALSE
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	16932144	A	C	0.00559	NBPF1	-	FALSE
chr1	567489	T	C	0.00119		.	FALSE
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr4	17804740	T	C	0.00015	DCAF16	-	TRUE	AluSx	SINE,Alu
chr3	101284940	T	C	8.16697E-05	TRMT10C	+	FALSE
chr1	45975348	T	C	0.00062	MMACHC	+	FALSE	AluSg7	SINE,Alu
chr3	107765392	G	A	0.00038	CD47	-	FALSE
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr3	40577745	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr3	44791553	T	C	1.10852E-07	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	10521254	T	C	0.00640	DFFA	-	TRUE	AluY	SINE,Alu
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr1	1650801	T	C	1.21097E-05	CDK11B,CDK11A	-	FALSE
chr3	10192672	G	A	5.82875E-07	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	115313028	T	A	0.00448	SIKE1	-	FALSE	AluSx1	SINE,Alu
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr1	32508397	T	C	0.00166	KHDRBS1	+	FALSE
chr1	76229185	T	A	0.00280	ACADM	+	FALSE
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr1	51822219	G	A	0.00283	EPS15	-	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr1	10520684	T	C	0.00389	DFFA	-	TRUE	AluSc8	SINE,Alu
chr7	100031511	C	T	0.00490	MEPCE	+	FALSE
chr5	128430757	T	C	0.00338	ISOC1	+	FALSE
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	1647893	C	T	0.00509	CDK11B,CDK11A	-	FALSE
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr9	89626839	T	G	0.00016	LOC440173	-	FALSE
chr1	10518037	T	C	0.00017		.	FALSE	AluJr	SINE,Alu
chr6	42856029	A	G	0.00099	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr6	42060429	T	C	0.00017		.	FALSE	AluSz6	SINE,Alu
chr19	54971229	T	C	0.00202	LENG8	+	FALSE
chr7	127941334	C	T	0.00440	MGC27345	-	FALSE	MIR3	SINE,Alu
chr2	84670484	T	C	0.00324	SUCLG1	-	TRUE
chr1	55319888	T	G	0.00000	DHCR24	-	FALSE
chr1	6159719	C	T	4.79205E-09	KCNAB2	+	FALSE
chr1	20975992	T	C	0.00027	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	10517513	T	C	0.00982		.	FALSE	AluSx1	SINE,Alu
chr3	129152089	G	A	0.00154	MBD4	-	FALSE
chr6	27327349	C	G	0.00359	ZNF204P	-	FALSE
chr1	1595586	T	C	0.00108	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr19	19793875	A	G	0.00198	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	33149486	A	G	5.00374E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	15993514	C	T	6.34808E-08		.	FALSE	AluSx4	SINE,Alu
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr6	42048297	A	G	0.00307	TAF8	+	TRUE	AluSq2	SINE,Alu
chr3	88199298	T	C	0.00112	C3orf38	+	FALSE
chr4	17802955	T	C	0.00071	DCAF16	-	FALSE	AluSz	SINE,Alu
chr3	196082911	T	C	0.00250	UBXN7	-	FALSE
chr1	145511796	T	G	0.00428	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	(T)n	SINE,Alu
chr5	31554098	G	T	2.66454E-15	C5orf22	+	FALSE
chrX	9863112	A	G	0.00498	SHROOM2	+	FALSE
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr10	79800443	A	G	0.00971	RPS24	+	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr6	33385535	A	G	0.00671		.	FALSE
chr1	156613632	G	A	0.00187	BCAN	+	FALSE
chr6	42856176	A	G	0.00202	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	220404381	A	G	0.00268	CHPF	-	FALSE
chr5	203683	G	T	0.00399		.	FALSE	MIRb	SINE,Alu
chr10	33189606	A	G	0.00011	ITGB1	-	FALSE
chr19	59095449	A	G	6.25071E-06	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr1	46751578	T	G	0.00380	LRRC41	-	FALSE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	16529016	C	T	0.00024	ARHGEF19	-	FALSE
chr1	59147926	T	C	0.00601	MYSM1	-	FALSE
chr1	8931947	T	C	0.00059	ENO1	-	FALSE
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr1	114443618	A	G	0.00910	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr17	57279323	A	G	0.00159	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	89649522	T	C	0.00358	GBP4	-	TRUE	AluJb	SINE,Alu
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr14	74526154	T	C	0.00126	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr1	180897569	C	T	0.00960	KIAA1614	+	FALSE
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr6	42856045	A	G	0.00428	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	75888160	A	C	0.00368	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	148556790	T	A	0.00728		.	FALSE
chr7	129472357	A	G	0.00287	UBE2H	-	FALSE
chr1	33086834	T	C	0.00251	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr3	100084432	G	A	0.00321	TOMM70	-	FALSE
chr14	31916783	T	C	3.40362E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	19984104	A	C	0.00402	MINOS1-NBL1,NBL1	+	FALSE
chr2	101622888	T	A	0.00210	RPL31	+	FALSE
chr19	57818376	A	G	0.00031		.	FALSE	AluJr	SINE,Alu
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chrX	123047168	A	G	2.82326E-05	XIAP	+	TRUE	AluSx	SINE,Alu
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr12	56815652	C	T	1.92663E-05	TIMELESS	-	FALSE
chr1	10519910	T	C	0.00735		.	FALSE	AluJr	SINE,Alu
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr4	73923043	T	C	0.00236	COX18	-	TRUE	AluSz	SINE,Alu
chr1	120163248	G	A	4.97770E-06	ZNF697	-	FALSE
chr1	149943157	G	A	0.00024	OTUD7B	-	FALSE
chr1	150783968	T	A	0.00368	ARNT	-	FALSE
chr1	16893813	A	G	0.00255	NBPF1	-	FALSE
chr1	17733268	T	C	0.00472	RCC2	-	FALSE
chr3	176739580	T	C	4.09936E-06	TBL1XR1	-	FALSE
chr1	15736656	A	G	0.00958	EFHD2	+	FALSE
chr1	153917621	G	C	0.00020	DENND4B	-	FALSE
chr3	15114318	T	C	0.00067	RBSN	-	TRUE	AluY	SINE,Alu
chrX	16781275	A	G	0.00417		.	FALSE	AluJo	SINE,Alu
chr2	34080819	A	C	0.00815	LINC01317	+	FALSE	MSTD	SINE,Alu
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	85548075	C	A	0.00932	TGOLN2	-	FALSE
chr2	201774185	T	C	6.12175E-05		.	FALSE	AluSz	SINE,Alu
chr17	65335292	T	C	6.31480E-06	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	120455441	A	G	0.00872	NOTCH2	-	FALSE
chr3	195694454	C	T	0.00307	SDHAP1	-	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr14	23795219	C	T	0.00201	BCL2L2-PABPN1,PABPN1	+	FALSE
chr12	133334739	T	C	0.00388	ANKLE2	-	TRUE	AluSz	SINE,Alu
chr1	225707043	T	C	2.18813E-07	ENAH	-	FALSE
chr1	25894466	A	C	0.00783	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr3	42266346	A	G	0.00824	TRAK1	+	FALSE
chr1	16576295	G	A	0.00231	FBXO42	-	FALSE	A-rich	SINE,Alu
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr1	16841620	T	A	0.00023		.	FALSE
chr1	120694990	C	A	0.00325		.	FALSE	A-rich	SINE,Alu
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr1	16929279	G	A	0.00138	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	38327457	T	C	0.00305	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr1	28261657	C	T	0.00327	SMPDL3B	+	FALSE
chr3	194999352	A	T	0.00482	ACAP2	-	FALSE
chr1	10520154	T	C	0.00124		.	FALSE	AluSx	SINE,Alu
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr16	10626615	C	T	0.00489	EMP2	-	FALSE	(T)n	SINE,Alu
chr16	87443734	C	T	0.00074	ZCCHC14	-	FALSE
chr13	114748384	C	T	0.00050	RASA3	-	FALSE
chr10	865825	C	T	0.00088	LARP4B	-	FALSE
chr19	9672436	T	C	3.01645E-08		.	FALSE	AluJr	SINE,Alu
chr4	165996838	T	C	0.00480		.	FALSE	AluSg4	SINE,Alu
chr1	77556766	T	A	0.00576	PIGK	-	FALSE
chr1	10521172	T	C	0.00244	DFFA	-	TRUE	AluY	SINE,Alu
chr1	117532509	C	A	0.00521	PTGFRN	+	FALSE
chr1	146650916	C	T	0.00025	PDIA3P1	+	FALSE
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr1	44088556	C	A	0.00260	PTPRF	+	FALSE	A-rich	SINE,Alu
chr6	31324036	T	A	0.00378		.	FALSE
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr9	85861582	T	A	0.00604	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr2	69688754	T	C	0.00319	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr1	114455907	G	A	0.00705	DCLRE1B	+	FALSE
chr6	158364714	A	G	0.00442	SNX9	+	FALSE
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr19	24104018	A	G	0.00543	ZNF726	+	FALSE	AluSg4	SINE,Alu
chr4	6304286	C	T	0.00054	WFS1	+	FALSE
chr1	144922583	G	A	0.00101	NBPF20,PDE4DIP	+,-	FALSE
chr16	89627988	G	T	5.83717E-06	RPL13	+	FALSE
chr2	27466552	G	C	0.00396	CAD	+	FALSE
chr1	32742441	G	A	2.83845E-11	LCK	+	FALSE
chrX	150573750	A	T	0.00887	VMA21	+	FALSE
chr7	6501836	A	C	0.00081	KDELR2	-	FALSE
chr7	6064012	T	C	0.00240	EIF2AK1	-	FALSE
chr1	145442111	C	A	0.00090	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	19543457	T	C	0.00569	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	46032974	T	C	0.00196	AKR1A1	+	FALSE
chr1	54493197	T	C	0.00148	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr5	31553968	T	C	0.00555	C5orf22	+	FALSE
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr4	73923056	T	C	0.00077	COX18	-	TRUE	AluSz	SINE,Alu
chr1	220323448	C	T	0.00985	RAB3GAP2	-	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr18	2763697	C	T	8.35636E-08	SMCHD1	+	FALSE
chr1	100676277	A	G	0.00135	DBT	-	FALSE
chr1	6583097	T	C	0.00022	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	10518052	T	C	7.90759E-05		.	FALSE	AluJr	SINE,Alu
chr6	42856978	A	G	0.00061	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	9162394	T	C	0.00072		.	FALSE	AluSx	SINE,Alu
chr3	48787684	T	C	0.00813	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr10	89623863	G	C	0.00107	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	31491629	A	G	2.09863E-05		.	FALSE
chrX	77083952	T	C	0.00045	MAGT1	-	TRUE	AluSz	SINE,Alu
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE
chr2	232319524	T	A	0.00245	NCL	-	FALSE
chr3	149686507	T	C	0.00193	PFN2	-	FALSE
chr1	9788153	G	A	0.00198	PIK3CD	+	FALSE	AluSx	SINE,Alu
chr2	230876757	G	C	0.00321	FBXO36	+	FALSE
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	33148789	A	G	0.00568	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	66430378	T	A	0.00326	LRIG1	-	FALSE
chr1	86815303	T	C	0.00571	ODF2L	-	FALSE
chr2	24223142	A	G	0.00524	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr2	37330435	T	C	3.14905E-06		.	FALSE	AluSq2	SINE,Alu
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr4	3076659	A	C	0.00401	HTT	+	FALSE	(CAG)n	SINE,Alu
chr20	45839074	A	T	0.00019	ZMYND8	-	FALSE	(T)n	SINE,Alu
chr2	206983075	T	C	0.00083		.	FALSE	AluJb	SINE,Alu
chr15	65442647	T	C	2.02205E-07	CLPX	-	TRUE	AluSg4	SINE,Alu
chr16	10624997	T	C	1.19407E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	33148716	T	C	0.00835	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	23381596	T	C	0.00762	KDM1A	+	FALSE
chr11	8707394	T	A	4.23595E-06	RPL27A	+	FALSE
chr8	30536151	T	C	5.90006E-09	GSR	-	TRUE	AluJr	SINE,Alu
chr1	2323041	T	C	0.00970	MORN1	-	FALSE
chr1	2125114	C	T	1.71441E-12	FAAP20	-	FALSE
chr1	16912029	C	G	0.00268	NBPF1	-	FALSE
chr2	37331750	T	C	1.79348E-08		.	FALSE	AluJb	SINE,Alu
chr1	179044100	A	G	0.00219	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	202848587	G	A	2.63176E-05	RABIF	-	FALSE
chr1	28835934	A	G	3.31538E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	1595048	T	C	0.00495	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr16	48388382	A	G	0.00301	MIR5095	+	TRUE	AluSz	SINE,Alu
chr1	112003958	T	A	0.00557	ATP5F1	+	FALSE	Helitron2Na_Mam	SINE,Alu
chr2	73480136	T	A	0.00281	CCT7	+	FALSE
chr3	46623292	T	C	0.00408	TDGF1	+	FALSE	AluSx3	SINE,Alu
chr1	179326882	A	G	0.00020	SOAT1	+	TRUE	AluJo	SINE,Alu
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr3	15113042	C	T	4.09809E-05	RBSN	-	FALSE
chr1	19585519	A	G	3.44907E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr2	223807622	G	T	0.00875	ACSL3	+	FALSE
chrX	123046306	A	G	0.00016	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chr5	133738270	T	C	0.00067	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr3	42689777	T	G	0.00696	NKTR,LOC101928323	+,-	FALSE	MLT1E3	SINE,Alu
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	9427842	A	G	0.00923	SPSB1	+	FALSE
chr2	37331025	T	C	0.00029		.	FALSE	AluSx1	SINE,Alu
chr1	47099235	A	C	0.00919		.	FALSE
chr12	123253741	A	G	0.00134	DENR	+	TRUE	(AT)n	SINE,Alu
chr1	900717	C	T	0.00661	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	153643449	G	C	0.00704	ILF2	-	FALSE
chr2	99812465	A	G	0.00367	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr2	85776508	A	T	0.00747	GGCX	-	FALSE	AluSz6	SINE,Alu
chr1	10520702	T	C	0.00883	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	161930908	G	A	0.00083	ATF6	+	FALSE
chr1	100203693	G	A	0.00142	FRRS1	-	FALSE
chr14	50792961	G	A	0.00547		.	FALSE	AluSx	SINE,Alu
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr2	86249961	T	C	0.00368	LOC90784	-	TRUE	AluJr	SINE,Alu
chr9	124103030	G	A	0.00193	STOM	-	FALSE	AluSq2	SINE,Alu
chr17	42880118	T	C	0.00140	GJC1	-	TRUE	AluJb	SINE,Alu
chr6	29910586	G	A	1.69263E-05		.	FALSE
chr1	36068369	T	C	0.00012	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	53291408	A	G	0.00021	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	33147947	A	G	0.00345	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr9	136217449	C	G	0.00158	RPL7A	+	FALSE
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	17384395	A	G	1.20082E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr1	31405694	G	A	0.00986	PUM1	-	FALSE
chr1	45279898	C	T	0.00271		.	FALSE	(TCTT)n	SINE,Alu
chr1	26801731	G	T	0.00146	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	6282400	T	C	0.00321	ICMT	-	TRUE	AluSz	SINE,Alu
chr12	33021934	A	G	0.00035	PKP2	-	FALSE
chr1	154317153	C	T	0.00567	ATP8B2	+	FALSE
chr1	200521412	G	A	0.00110	KIF14	-	FALSE
chr20	29631604	G	A	0.00045	FRG1BP	+	FALSE
chr1	45975740	C	G	0.00096	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr11	75526481	C	A	0.00995	UVRAG	+	FALSE
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	11979809	A	C	0.00744	KIAA2013	-	FALSE
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	109747437	A	G	0.00104	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr1	19542631	T	C	0.00741	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	160965287	T	C	0.00766	F11R	-	TRUE	AluSc	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr15	40462780	G	A	0.00251	BUB1B	+	FALSE
chr1	117618067	C	T	0.00118	TTF2	+	FALSE
chr5	121362874	A	G	0.00022	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr3	48485493	A	G	7.09932E-12	TMA7	+	FALSE
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr5	154194459	C	A	0.00556	LARP1	+	FALSE
chr1	45975358	A	G	0.00339	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	222802926	C	T	0.00035	MIA3	+	FALSE
chr2	220416942	G	C	0.00100	OBSL1	-	FALSE
chr3	56654600	C	G	0.00490	CCDC66,FAM208A	+,-	FALSE
chr1	20977856	T	C	0.00232	PINK1,PINK1-AS	+,-	FALSE
chr10	51613231	T	C	2.61914E-05	TIMM23B,TIMM23	+,-	FALSE
chr3	156258227	T	C	0.00094	SSR3	-	TRUE	AluYk3	SINE,Alu
chr3	10193796	A	G	0.00493	VHL	+	TRUE	AluSx	SINE,Alu
chr7	26708303	G	T	0.00095	SKAP2	-	FALSE	AluSx3	SINE,Alu
chr1	89447715	T	G	0.00137	KYAT3,RBMXL1	-	FALSE
chr4	89180334	T	C	0.00224	PPM1K	-	TRUE	AluSx4	SINE,Alu
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr17	72784932	G	A	0.00444	TMEM104	+	FALSE

RBP	SF3B1
Knock-Method	shRNA
RBP Family	SF3b1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR047QHX
Platform	HiSeq
Pubmed ID	32252787

SF3B1 - Target Gene Network