RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	109192040	T	C	6.39517E-05	HENMT1	-	TRUE	AluJr	SINE,Alu
chr2	178086785	C	A	0.00808	HNRNPA3	+	FALSE
chr2	38975954	A	C	0.00381	SRSF7	-	FALSE
chr4	57327087	A	G	0.00047	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	144852203	T	G	0.00518	NBPF20,PDE4DIP	+,-	FALSE
chr2	86252136	T	C	0.00015	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	36068295	T	C	2.11660E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	145689028	A	G	9.93195E-07	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr14	63841401	G	C	0.00014	PPP2R5E	-	FALSE
chr1	245017464	T	A	0.00624	HNRNPU,SNORA100	-	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr1	12024235	C	T	0.00395	PLOD1	+	FALSE
chr1	79126336	C	G	1.94494E-06	IFI44	+	FALSE
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chr1	35658211	G	T	1.28982E-07	SFPQ	-	FALSE
chr2	217001882	T	C	0.00996	XRCC5	+	FALSE
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr1	45976723	T	C	0.00340	MMACHC,PRDX1	+,-	FALSE
chr1	204521724	A	G	0.00851	MDM4	+	TRUE	AluSg	SINE,Alu
chr13	114204255	A	G	0.00134	TMCO3	+	FALSE
chr1	44171144	T	A	0.00108	KDM4A-AS1,KDM4A	+,-	FALSE
chr21	44331206	A	G	0.00167		.	FALSE	AluSz	SINE,Alu
chr4	128995640	G	A	0.00567	LARP1B	+	FALSE
chr3	98307696	T	G	3.25383E-09	CPOX	-	FALSE
chr3	40353791	A	T	0.00419	EIF1B	+	FALSE
chr1	67874859	T	C	0.00214	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	144595935	G	A	0.00860	NBPF20	+	FALSE	AluJb	SINE,Alu
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr6	160100931	T	C	0.00215	SOD2	-	TRUE	AluSz	SINE,Alu
chr8	23290112	T	C	0.00121	ENTPD4	-	TRUE	AluY	SINE,Alu
chr1	92862879	A	G	3.90108E-09		.	FALSE	AluJr	SINE,Alu
chr1	36068052	G	T	1.43241E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr7	2290522	C	T	0.00517	NUDT1	+	FALSE
chrX	54587290	A	G	0.00504	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr5	115165731	T	C	0.00410	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	145281543	C	T	0.00028	NBPF20,NOTCH2NL	+	FALSE
chr5	40832557	G	T	0.00024	RPL37	-	FALSE
chr4	89181451	T	C	8.32748E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr3	18427924	G	T	0.00312	SATB1	-	FALSE
chr3	98518157	A	T	8.60022E-05	DCBLD2	-	FALSE
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr2	187544218	T	G	0.00796	ITGAV	+	FALSE
chr8	128752643	G	A	4.26326E-14	MYC	+	FALSE	GA-rich	SINE,Alu
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	40537947	A	C	0.00295	CAP1	+	FALSE
chr1	53288894	A	G	8.27269E-06	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr15	85185205	T	C	0.00459	WDR73,SCAND2P	+,-	FALSE	FLAM_C	SINE,Alu
chr10	63829539	C	T	0.00918	ARID5B	+	FALSE
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr3	40503561	A	T	0.00012	RPL14	+	FALSE
chr3	42826041	T	G	5.78537E-12	HIGD1A	-	FALSE
chr3	176739159	A	C	0.00304	TBL1XR1	-	FALSE
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	67518534	C	T	0.00030	SLC35D1	-	FALSE
chr1	67874731	T	C	0.00613	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	20975992	T	C	2.78350E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	236714710	C	T	0.00014	LGALS8,HEATR1	+,-	FALSE
chr1	23835919	C	T	0.00872	E2F2	-	FALSE
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr1	10520819	T	C	0.00022	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	33148196	A	G	0.00303	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	22159774	G	A	0.00257	HSPG2	-	FALSE
chr3	22424405	T	A	0.00766		.	FALSE
chr2	170103351	G	T	0.00139	LRP2	-	FALSE
chr4	17802956	T	C	0.00351	DCAF16	-	TRUE	AluSz	SINE,Alu
chr22	16148322	A	G	0.00933		.	FALSE	L1ME2z	SINE,Alu
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr6	42857136	A	G	2.38933E-09	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr5	32601672	A	T	0.00563	SUB1	+	FALSE
chr14	50361197	G	T	1.76251E-06	ARF6	+	FALSE
chr3	100083423	T	C	0.00678	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	53291420	A	G	6.80791E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	145293515	A	G	0.00885	NBPF20,NBPF10	+	FALSE
chr1	70718269	A	G	0.00234		.	FALSE
chr1	36067784	T	C	0.00821	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10517567	T	C	0.00262		.	FALSE	AluSx1	SINE,Alu
chr1	109795026	T	C	0.00355	CELSR2	+	FALSE
chr1	89299658	G	A	0.00779	PKN2	+	FALSE
chr1	67896040	G	A	1.31286E-05	SERBP1	-	FALSE
chr6	114182251	C	T	0.00021	MARCKS	+	FALSE
chr15	41573612	C	A	0.00355	CHP1	+	FALSE
chr4	52753346	A	G	0.00782	DCUN1D4	+	TRUE	AluSc	SINE,Alu
chr3	121435624	C	T	0.00063	GOLGB1	-	FALSE
chr1	9161090	A	G	0.00068		.	FALSE	AluJb	SINE,Alu
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr2	99812978	A	G	0.00167	MRPL30	+	TRUE	AluJb	SINE,Alu
chr6	18264326	T	A	0.00067	DEK	-	FALSE
chr14	90509582	T	C	0.00017	TDP1	+	FALSE
chr3	195243012	A	C	0.00054	PPP1R2	-	FALSE
chr1	16891365	G	A	0.00609	NBPF1	-	FALSE
chr1	144053663	A	T	0.00155		.	FALSE
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr9	70648427	G	A	0.00096		.	FALSE	TAR1	SINE,Alu
chr15	66641732	G	C	0.00106	TIPIN	-	FALSE
chr16	75479474	T	C	2.06057E-06	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	225706943	C	T	0.00229	ENAH	-	FALSE
chr16	70695982	T	C	0.00926	MTSS1L	-	FALSE
chr20	29631604	G	A	0.00045	FRG1BP	+	FALSE
chr1	184762524	T	C	0.00778	FAM129A	-	TRUE	AluSz	SINE,Alu
chr3	181430454	G	A	0.00577	SOX2-OT,SOX2	+	FALSE
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr1	1152309	A	T	0.00035	SDF4	-	FALSE
chr1	160967899	T	C	0.00661	F11R	-	TRUE	AluSp	SINE,Alu
chr4	2940413	T	C	0.00311	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	40214296	A	G	0.00485	PPIE	+	TRUE	AluSq2	SINE,Alu
chr6	52860422	G	C	0.00024		.	FALSE	7SK	SINE,Alu
chr1	28608338	A	G	0.00341	SESN2	+	FALSE
chr11	118947634	C	T	0.00276	VPS11	+	FALSE
chr1	179044181	A	G	0.00660	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr1	145512073	A	G	0.00056	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr19	42376843	A	G	0.00221		.	FALSE	AluSp	SINE,Alu
chr1	91486838	G	C	0.00514	ZNF644	-	FALSE
chr1	10520505	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr1	94351063	A	T	0.00855	GCLM	-	FALSE
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	40537918	T	A	0.00773	CAP1	+	FALSE
chr1	156613401	T	C	5.47226E-05	BCAN	+	FALSE
chr12	1611799	A	G	0.00156	LINC00942	+	FALSE
chr1	154454628	T	C	0.00099	SHE	-	TRUE	AluSq2	SINE,Alu
chr1	53290298	A	G	0.00258	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	109181317	C	G	0.00166	FAM102B	+	FALSE
chr1	145689717	A	G	7.73781E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	145376020	G	A	0.00478	NBPF20,NBPF10	+	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr1	144823139	G	A	0.00941	NBPF20,NBPF9	+	FALSE
chr1	46764013	G	A	0.00224	LRRC41	-	FALSE
chr1	228682330	C	G	0.00509	RNF187	+	FALSE
chr5	140594467	G	A	0.00045	PCDHB13	+	FALSE
chr7	100279005	C	A	0.00176	GIGYF1	-	FALSE	(A)n	SINE,Alu
chr17	65335454	T	C	9.75664E-07	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	65496187	G	A	0.00103	ACTR2	+	FALSE
chr12	64842920	A	G	2.84792E-05		.	FALSE	AluSz	SINE,Alu
chr1	145511929	A	G	0.00028	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr6	79647408	T	G	0.00561	PHIP	-	FALSE
chr1	201488170	A	G	0.00997		.	FALSE	AluSz	SINE,Alu
chr2	128063697	G	A	0.00775	MAP3K2	-	FALSE
chr3	10193511	A	G	0.00116	VHL	+	TRUE	AluJr	SINE,Alu
chr1	11347142	C	G	0.00789	UBIAD1	+	FALSE
chr3	58304244	G	A	0.00560	RPP14	+	FALSE	AluSz	SINE,Alu
chr7	2473747	A	G	0.00872	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr1	120612194	C	G	1.19417E-05	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr3	191115082	G	C	0.00980	CCDC50	+	FALSE
chr1	45187511	T	C	7.71832E-06	C1orf228	+	FALSE	U5	SINE,Alu
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr1	1683565	G	A	0.00552	NADK	-	FALSE
chr1	11187199	G	T	0.00047	MTOR	-	FALSE
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr1	9330740	G	C	0.00077	H6PD	+	FALSE
chr1	28261662	A	G	0.01000	SMPDL3B	+	FALSE
chr1	19543457	T	C	0.00012	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	102004748	T	C	0.00050	LOC100289561,LOC100630923	+	FALSE
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr7	116339672	C	T	0.00876	MET	+	FALSE
chr2	17965390	T	C	0.00713	GEN1	+	FALSE	L1M4	SINE,Alu
chr1	9160958	T	C	3.06099E-05		.	FALSE	AluJb	SINE,Alu
chr1	28661718	A	G	0.00520	MED18	+	TRUE	AluSg	SINE,Alu
chr12	125511242	A	G	0.00015	THRIL	-	FALSE	AluSx1	SINE,Alu
chr10	70502288	G	A	0.00347	CCAR1	+	FALSE
chr2	128951094	A	G	0.00415	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr1	46077218	A	G	0.00543	NASP	+	TRUE	AluSc8	SINE,Alu
chr9	125609941	G	A	0.00043		.	FALSE
chr6	13790848	T	C	0.00344	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	26608017	T	A	3.67009E-06		.	FALSE
chr1	1650832	A	G	0.00407	CDK11B,CDK11A	-	FALSE
chr3	10193796	A	G	0.00291	VHL	+	TRUE	AluSx	SINE,Alu
chr6	36894338	A	G	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	6282236	T	C	0.00388	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	78029102	G	A	0.00086	ZZZ3	-	FALSE
chr2	61150192	C	A	0.00436	REL	+	FALSE	AluSz6	SINE,Alu
chr1	31905905	G	C	0.00028	SERINC2	+	FALSE
chr2	24494638	T	G	0.00507	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr2	37328034	T	C	0.00047		.	FALSE
chr2	69688754	T	C	0.00319	AAK1	-	TRUE	AluSq2	SINE,Alu
chr21	47676711	G	A	0.00316	MCM3AP	-	FALSE
chr7	123390058	A	G	0.00102		.	FALSE
chr3	183900836	G	A	2.54977E-05	AP2M1	+	FALSE
chr1	117530273	A	G	0.00270	PTGFRN	+	FALSE
chr2	74381319	C	A	0.00912	MOB1A	-	FALSE	AluY	SINE,Alu
chr19	19792345	A	G	0.00272	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	109818158	C	T	4.51493E-05	CELSR2	+	FALSE
chr4	128757345	A	G	0.00040		.	FALSE	AluY	SINE,Alu
chr2	44459528	G	A	0.00126	PPM1B	+	FALSE
chr1	21795388	A	G	0.00732	NBPF3	+	FALSE
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr1	9788153	G	A	0.00198	PIK3CD	+	FALSE	AluSx	SINE,Alu
chr1	117644949	C	G	0.00440	TTF2	+	FALSE
chr1	84971969	G	T	0.00626	GNG5	-	FALSE
chr2	85772407	T	A	0.00232	GGCX	-	FALSE
chr2	74442550	A	T	0.00826		.	FALSE
chr17	41144581	A	C	0.00806	RUNDC1	+	FALSE	AluSx	SINE,Alu
chr2	55516937	G	T	0.00250	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr11	118880839	A	G	0.00922	CCDC84	+	TRUE	AluJb	SINE,Alu
chr10	75008841	T	C	0.00088	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr3	178741082	A	C	5.87013E-06	ZMAT3	-	FALSE
chr1	8877520	A	T	0.00308	RERE	-	FALSE
chr1	28662053	G	A	0.00158	MED18	+	FALSE	AluSq2	SINE,Alu
chr4	57326291	A	G	0.00017	PAICS	+	TRUE	AluJr	SINE,Alu
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	949608	G	A	0.00416	ISG15	+	FALSE
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr1	158066834	A	G	0.00609	KIRREL	+	FALSE
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr2	206986245	T	C	0.00304		.	FALSE	AluSz	SINE,Alu
chr3	10192704	A	G	0.00402	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	155403831	A	G	0.00676	ASH1L,POU5F1P4	+,-	FALSE
chr3	52028445	C	T	0.00934	RPL29	-	FALSE
chr5	69497703	G	A	0.00557	SMA4	-	FALSE
chr1	9353122	C	G	0.00562	SPSB1	+	FALSE	(GCG)n	SINE,Alu
chr4	73922978	T	C	0.00079	COX18	-	TRUE	AluSz	SINE,Alu
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr2	87002706	G	A	0.00178	RMND5A	+	FALSE
chr17	4721376	A	G	0.00177	PLD2	+	FALSE
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr4	47593283	G	C	0.00110	ATP10D	+	FALSE
chr1	53680090	G	A	0.00321	C1orf123	-	FALSE
chr1	33139178	A	G	0.00108	RBBP4	+	TRUE	AluSx3	SINE,Alu
chr1	145509569	A	G	0.00405	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr4	44176960	T	C	0.00043	KCTD8	-	FALSE
chr1	145499276	C	T	0.00581	NBPF20,NBPF10,LIX1L	+	FALSE
chr22	39069181	T	C	0.00346	CBY1	+	FALSE
chr10	75009591	T	C	8.39163E-08	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr1	40219280	T	C	8.82951E-05	PPIE	+	FALSE
chr1	36067784	T	C	1.34898E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr12	3150859	C	T	0.00317		.	FALSE	(CCTCCCTG)n	SINE,Alu
chr1	31905886	C	A	0.00335	SERINC2	+	FALSE
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr2	70452146	T	G	0.00192	TIA1	-	FALSE
chr11	32125961	C	T	0.00118	RCN1	+	FALSE
chr1	9160989	T	C	0.00183		.	FALSE	AluJb	SINE,Alu
chr5	40829980	T	C	0.00752		.	FALSE	AluSp	SINE,Alu
chr3	15113847	T	C	0.00026	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	197477932	C	T	0.00488	DENND1B	-	FALSE
chr17	67539228	G	C	0.00200		.	FALSE
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr15	33063527	C	T	0.00183	FMN1	-	FALSE	AluYk3	SINE,Alu
chr3	39137793	C	T	0.00363	WDR48	+	FALSE
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr2	85773494	T	C	0.00099	GGCX	-	TRUE	AluY	SINE,Alu
chr1	1647893	C	T	0.00509	CDK11B,CDK11A	-	FALSE
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr4	119553307	T	C	0.00096	LOC729218	+	FALSE
chr1	65720330	A	C	0.00211		.	FALSE
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	44088112	G	T	0.00822	PTPRF	+	FALSE	(T)n	SINE,Alu
chr1	16889502	T	C	5.54778E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr3	42610515	G	A	0.00099	SEC22C	-	FALSE
chr1	27202960	T	C	0.00213		.	FALSE	AluSq2	SINE,Alu
chr11	34379275	T	C	0.00994	ABTB2	-	FALSE
chr1	36067677	T	C	0.00017	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr17	79780692	T	C	0.00116	MCRIP1	-	TRUE
chr6	42856007	A	G	0.00212	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr2	206986233	T	C	0.00109		.	FALSE	AluSz	SINE,Alu
chr3	16301148	T	C	0.00050	DPH3	-	FALSE
chr15	38643574	T	C	0.00455	SPRED1	+	FALSE
chr1	10520174	T	C	0.00163		.	FALSE	AluSx	SINE,Alu
chr2	238673923	C	A	0.00813	LRRFIP1	+	FALSE	(CA)n	SINE,Alu
chrM	9988	T	C	0.00011		.	FALSE
chr1	10519946	T	C	0.00578		.	FALSE	AluJr	SINE,Alu
chr2	132275343	G	T	0.00334	LOC150776	+	FALSE
chr15	91044383	G	T	0.00440	IQGAP1	+	FALSE
chr1	145513017	A	G	3.59549E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr14	23441380	T	C	0.00102	AJUBA	-	TRUE	Eutr2	SINE,Alu
chr19	42375549	A	G	4.56329E-05		.	FALSE	AluSx	SINE,Alu
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr19	58372320	A	G	0.00510	ZNF587	+	TRUE	AluSz	SINE,Alu
chr8	30536437	T	C	0.00062	GSR	-	FALSE	AluSp	SINE,Alu
chr19	41097276	C	G	0.00188	SHKBP1	+	FALSE
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr2	242212177	C	T	2.31719E-05	HDLBP	-	FALSE
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr8	56985609	G	T	0.00134	RPS20	-	FALSE
chr1	145284432	G	A	0.00795	NBPF20,NOTCH2NL	+	FALSE
chr1	9163290	T	C	0.00016		.	FALSE	AluSp	SINE,Alu
chr1	16717888	G	A	0.00118	SZRD1	+	FALSE
chr1	145323668	G	C	0.00241	NBPF20,NBPF10	+	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	9161142	T	C	8.95302E-05		.	FALSE	AluSx	SINE,Alu
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr1	143231313	G	A	0.00137		.	FALSE
chr1	45242978	A	G	0.00604	RPS8	+	TRUE	AluSz	SINE,Alu
chr1	94351063	A	T	0.00188	GCLM	-	FALSE
chr1	46076543	A	G	0.00989	NASP	+	TRUE	AluSx	SINE,Alu
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr2	37328013	T	C	0.00401		.	FALSE
chr1	53291395	A	G	0.00017	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	19542463	T	C	0.00182	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	169988286	C	T	0.00029	PRKCI	+	FALSE
chr3	124688639	C	A	0.00165	HEG1	-	FALSE
chr11	75526481	C	A	0.00995	UVRAG	+	FALSE
chr19	53155567	T	C	0.00137	ZNF83	-	TRUE	AluSg	SINE,Alu
chr19	21302035	A	G	5.57890E-05	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr1	11181327	C	T	0.00573	MTOR	-	FALSE
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr1	145293469	G	C	0.00888	NBPF20,NBPF10	+	FALSE
chr1	173009536	T	A	0.00519		.	FALSE
chr1	117617705	A	G	0.00475	TTF2	+	FALSE
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE
chr1	1607574	C	T	0.00187	CDK11B,SLC35E2B	-	FALSE
chr6	138413269	A	G	0.00743	PERP	-	FALSE
chr4	154257510	A	C	0.00121	TRIM2	+	FALSE	(A)n	SINE,Alu
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	241796949	G	A	0.00053	OPN3,CHML	-	FALSE
chr1	1252221	T	C	0.00186	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr9	115446659	T	C	0.00410	INIP	-	TRUE	AluJr	SINE,Alu
chr1	26143726	G	T	0.00560	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	115299505	A	T	0.00064	CSDE1	-	FALSE
chr1	179042590	A	G	0.00152	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	202984020	A	T	0.00842	TMEM183A,TMEM183B	+	FALSE
chr6	109786003	T	C	0.00245	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	75671215	C	T	0.00019	SLC44A5	-	FALSE
chr1	19934900	G	A	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr7	128142691	A	G	0.00017	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	931935	T	C	0.00796		.	FALSE
chr2	183643241	C	A	0.00108	DNAJC10	+	FALSE
chr7	35840866	A	G	0.00947	SEPT7	+	FALSE
chr1	19199221	C	T	0.00392	ALDH4A1	-	FALSE
chr1	9331101	A	G	3.95613E-06	H6PD	+	FALSE	AluSx	SINE,Alu
chr2	197004439	A	G	0.00034	STK17B	-	FALSE
chr4	5743512	T	C	0.00210	EVC	+	FALSE
chr2	24224134	A	G	9.70565E-06		.	FALSE	AluSp	SINE,Alu
chr1	168220427	A	G	0.00670		.	FALSE	AluSz6	SINE,Alu
chr3	72424929	A	G	0.00988	RYBP	-	FALSE
chr2	1637201	C	T	5.10703E-15	PXDN	-	FALSE
chr1	148251875	T	C	0.00436	NBPF8,NBPF14,NBPF9	-	FALSE
chr12	120898728	A	G	0.00947	GATC	+	TRUE	AluY	SINE,Alu
chr10	75009721	T	C	1.96034E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr2	206986245	T	C	0.00979		.	FALSE	AluSz	SINE,Alu
chr5	32124827	G	T	0.00047	GOLPH3	-	FALSE
chr1	1668168	G	T	1.67311E-07	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr1	109535120	G	A	6.51608E-07	WDR47	-	FALSE
chr3	196293764	G	C	0.00392	WDR53	-	FALSE
chr3	10005159	A	T	0.00939	EMC3	-	FALSE	(AT)n	SINE,Alu
chr6	116600810	G	A	0.00028	DSE,TSPYL1	+,-	FALSE
chr3	45721905	A	G	0.00238	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	151095753	A	G	0.00256	GABPB2	+	TRUE	AluSz	SINE,Alu
chrM	9756	G	A	0.00315		.	FALSE
chr1	155851620	A	G	0.00066	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr2	99812464	A	G	1.88485E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	145666114	G	T	0.00766	RBM27	+	FALSE
chr1	45280109	A	G	0.00591		.	FALSE	AluYk3	SINE,Alu
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr2	128601556	T	C	3.22117E-06		.	FALSE	AluJr	SINE,Alu
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr4	6677063	G	A	0.00087	LOC93622	+	FALSE
chr1	109192051	T	C	0.00124	HENMT1	-	TRUE	AluJr	SINE,Alu
chr11	118620064	A	G	0.00192	DDX6	-	FALSE	(A)n	SINE,Alu
chr1	39305021	G	T	0.00027	RRAGC	-	FALSE
chr7	12675713	T	C	0.00363	SCIN	+	FALSE
chr1	149913733	T	C	0.00143	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	145512944	A	G	0.00110	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr20	3905907	A	G	0.00325	PANK2	+	TRUE	AluSx	SINE,Alu
chr1	244572643	C	A	0.00560	ADSS	-	FALSE
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr1	53708528	T	C	0.00057	LRP8	-	FALSE	(TA)n	SINE,Alu
chr4	114135223	A	T	5.22810E-05	ANK2	+	FALSE
chr7	64441627	G	A	0.00478	ZNF117	-	FALSE
chr2	47703548	G	A	5.05442E-05	MSH2	+	FALSE
chr3	45960557	C	T	1.72644E-06	FYCO1	-	FALSE
chr1	179326847	A	G	0.00031	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	8045341	T	A	0.00750	PARK7	+	FALSE
chr1	233518885	T	C	0.00021	MLK4	+	FALSE	(TTTC)n	SINE,Alu
chr3	44790781	T	C	0.00887	KIAA1143	-	TRUE	AluY	SINE,Alu
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr7	154796171	G	A	0.00066	PAXIP1-AS1	+	FALSE	AluSx3	SINE,Alu
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	22854928	A	G	0.00258	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr1	36068364	T	C	9.25575E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	50410818	G	C	0.00722	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr14	64951277	T	C	0.00077	ZBTB25	-	TRUE	AluSp	SINE,Alu
chr6	159396143	T	C	0.00185		.	FALSE	AluSc	SINE,Alu
chr12	125512444	A	G	4.63106E-05		.	FALSE	AluY	SINE,Alu
chr1	146740502	C	G	0.00692	CHD1L	+	FALSE
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chrX	3523061	C	G	0.00023	PRKX	-	FALSE	(AC)n	SINE,Alu
chr4	17804279	G	A	0.00606	DCAF16	-	FALSE	(A)n	SINE,Alu
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	75779619	T	A	0.00061	ZNF717	-	FALSE
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	244571947	C	T	0.00775	ADSS	-	FALSE
chr19	23926877	A	T	0.00896	ZNF681	-	FALSE
chr4	2940438	T	C	0.00151	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr17	4574751	T	A	0.00246	PELP1	-	FALSE
chr4	95586725	T	A	0.00743	PDLIM5	+	FALSE
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr4	57326879	A	G	0.00198	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr17	79529443	T	C	0.00153	NPLOC4	-	TRUE	AluSx1	SINE,Alu
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr1	112003958	T	A	0.00557	ATP5F1	+	FALSE	Helitron2Na_Mam	SINE,Alu
chr19	21367088	A	G	0.00018	ZNF431	+	TRUE	AluSc	SINE,Alu
chr1	109818162	T	C	0.00253	CELSR2	+	FALSE
chr3	15114293	T	C	2.60553E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	6282224	T	C	0.00785	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	184550501	A	G	0.00508	VPS8	+	FALSE
chr3	42826041	T	G	0.00019	HIGD1A	-	FALSE
chr1	21810586	C	T	0.00540	NBPF3	+	FALSE
chr12	100562935	G	T	0.00074	GOLGA2P5	-	FALSE	AluSg	SINE,Alu
chr1	16929327	C	T	0.00304	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	158631171	A	C	0.00815	SPTA1	-	FALSE
chr1	17735266	G	A	0.00471	RCC2	-	FALSE
chr1	92862836	A	G	0.00430		.	FALSE	AluJr	SINE,Alu
chr1	224380757	A	G	0.00618	DEGS1	+	FALSE	AluSx	SINE,Alu
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr7	6501831	T	A	0.00110	KDELR2	-	FALSE
chr1	38155698	G	T	0.00368	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr16	22297295	A	G	0.00749	EEF2K	+	TRUE	AluJr	SINE,Alu
chr1	213037745	C	G	0.00015	FLVCR1	+	FALSE
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	3730400	T	C	0.00018	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	1595034	T	C	2.36116E-07	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr6	47592459	A	G	0.00789	CD2AP	+	FALSE
chr2	37329300	T	C	0.00590		.	FALSE	AluJr4	SINE,Alu
chr1	145688663	T	G	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr1	19543799	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	17299387	T	A	0.00941	CROCC	+	FALSE
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr1	93299394	A	G	0.00655	FAM69A,RPL5	+,-	FALSE
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr1	36535590	A	G	0.00301		.	FALSE	AluSx1	SINE,Alu
chr2	75887834	T	C	0.00024	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr1	16889663	A	G	0.00392	NBPF1	-	FALSE
chr1	46075664	A	G	0.00045	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	206987731	T	C	0.00731		.	FALSE	AluJb	SINE,Alu
chr1	168218574	A	G	0.00148		.	FALSE	AluSz	SINE,Alu
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr7	100279138	A	T	0.00741	GIGYF1	-	FALSE	A-rich	SINE,Alu
chr1	9645101	C	T	0.00726		.	FALSE	(ATATTC)n	SINE,Alu
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr19	53914417	A	G	0.00013	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	46016687	T	C	0.00296	AKR1A1	+	FALSE
chr5	130537747	A	G	1.40133E-05	LYRM7	+	TRUE	AluJb	SINE,Alu
chr2	202031356	C	T	0.00247	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr6	31321915	A	G	0.00000		.	FALSE
chr1	45975740	C	G	0.00096	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	33148716	T	C	0.00835	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	118502087	C	T	0.00585	WDR3,SPAG17	+,-	FALSE
chr1	109181317	C	G	0.00597	FAM102B	+	FALSE
chr1	156233189	C	T	5.51743E-05	SMG5	-	FALSE
chr1	145511962	A	G	0.00091	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	217366590	A	G	0.00013		.	FALSE	AluSz	SINE,Alu
chr1	119574587	C	T	0.00901	WARS2	-	FALSE
chr3	191116133	C	T	0.00032	CCDC50	+	FALSE
chr7	65619243	A	G	9.04168E-05	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	19585519	A	G	6.02134E-06	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr2	131129926	G	T	0.00034	PTPN18	+	FALSE
chr15	59952905	A	G	0.00150	BNIP2	-	FALSE
chr1	118066459	A	G	0.00729	MAN1A2	+	FALSE

RBP	KHSRP
Knock-Method	shRNA
RBP Family	KH_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR850CKU
Platform	HiSeq
Pubmed ID	32252787

KHSRP - Target Gene Network