RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	6684049	G	A	5.41898E-05	PHF13	+	FALSE
chr5	52386902	A	G	0.00249	ITGA2	+	FALSE
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr1	17314702	C	T	0.00140	ATP13A2	-	FALSE
chr14	105270478	G	T	0.00252	ZBTB42	+	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr2	61277486	A	G	0.00355	PEX13	+	TRUE	AluSx	SINE,Alu
chr6	43582750	A	G	0.00844	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr5	85916592	G	A	0.00018		.	FALSE
chr1	214524576	T	C	0.00442	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	12628188	T	C	6.05765E-06	DHRS3	-	FALSE
chr2	86252025	T	C	3.86923E-05	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr2	96573123	C	T	0.00413	ANKRD36C	-	FALSE
chr5	95222277	C	T	0.00599	ELL2	-	FALSE
chr15	66641732	G	C	0.00106	TIPIN	-	FALSE
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr3	45960851	C	T	0.00299	FYCO1	-	FALSE
chr1	144821986	C	T	0.00218	NBPF20,NBPF9	+	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr3	124732407	T	G	0.00405	HEG1	-	FALSE
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr4	152025793	T	A	0.00675	RPS3A	+	FALSE
chr5	132028864	G	A	0.00593	KIF3A	-	FALSE
chr6	13788294	T	C	0.00017	MCUR1	-	TRUE	AluSx	SINE,Alu
chr6	17557416	G	T	0.00885	CAP2	+	FALSE
chr10	89004545	T	C	0.00192	NUTM2A-AS1	-	FALSE	MSTA	SINE,Alu
chr2	32535797	A	G	0.00910		.	FALSE	AluJb	SINE,Alu
chr3	180694862	C	T	0.00638	FXR1	+	FALSE	(T)n	SINE,Alu
chr8	27661063	T	A	0.00138	ESCO2	+	FALSE	(AC)n	SINE,Alu
chr3	5025537	G	A	0.00195	BHLHE40	+	FALSE	(GT)n	SINE,Alu
chr8	128944725	G	C	0.00491	PVT1	+	FALSE
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr1	3654747	C	A	0.00691	TP73-AS1	-	FALSE
chr6	79649800	C	G	0.00864	PHIP	-	FALSE
chr6	108214773	C	T	0.00265	SEC63	-	FALSE
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr4	57326875	A	G	0.00797	PAICS	+	TRUE	AluSx1	SINE,Alu
chr8	30535980	T	C	0.00038	GSR	-	TRUE	AluJr	SINE,Alu
chr2	217366919	A	G	0.00480		.	FALSE	AluSz6	SINE,Alu
chr3	45125566	C	T	0.00000	CDCP1	-	FALSE	Charlie8	SINE,Alu
chr1	33086812	T	C	0.00812		.	FALSE	AluY	SINE,Alu
chr3	196769982	C	G	0.00131	DLG1	-	FALSE
chr1	142804471	C	G	0.00555		.	FALSE	MIRb	SINE,Alu
chr5	176916516	C	T	0.00093	PDLIM7	-	FALSE
chr1	160966353	T	C	0.00011	F11R	-	TRUE	AluSg	SINE,Alu
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	231557255	C	G	0.00056	EGLN1	-	FALSE	(GCC)n	SINE,Alu
chr20	10036845	A	G	0.00110	SNAP25-AS1,ANKEF1	+,-	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr7	299850	G	T	1.36182E-06	FAM20C	+	FALSE
chr12	98943162	A	G	5.01524E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	32697063	T	C	0.00035	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	900723	T	G	0.00051	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr2	234183368	A	G	0.00369	ATG16L1	+	FALSE
chr1	148561090	G	A	0.00087	NBPF15	+	FALSE
chr1	19542463	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	87573349	C	G	0.00914	HS2ST1	+	FALSE
chr2	42577806	T	A	0.00276	COX7A2L	-	FALSE
chr12	49745425	A	G	0.00489	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr2	72405098	C	A	0.00646	EXOC6B	-	FALSE
chr1	220231254	T	C	0.00376	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	9161365	T	C	4.68504E-05		.	FALSE	AluSx	SINE,Alu
chr2	37075013	T	A	0.00754	STRN	-	FALSE
chr1	33149502	A	G	0.00045	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	9160989	T	C	0.00092		.	FALSE	AluJb	SINE,Alu
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr3	197611048	A	G	0.00573		.	FALSE	AluSx1	SINE,Alu
chr2	208619461	A	G	2.24939E-05	CCNYL1	+	TRUE	FAM	SINE,Alu
chr5	180669695	T	C	0.00101	RACK1	-	TRUE	AluSx1	SINE,Alu
chr1	38463504	C	T	0.00068	FHL3	-	FALSE
chr1	10042955	A	G	0.00430	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr2	37330517	T	C	0.00324		.	FALSE	AluSq2	SINE,Alu
chr2	220406239	T	G	0.00035	CHPF	-	FALSE	MIRb	SINE,Alu
chr6	42856978	A	G	0.00061	RPL7L1	+	TRUE	AluSp	SINE,Alu
chrX	106184603	A	T	0.00717	MORC4	-	FALSE	(GA)n	SINE,Alu
chr1	36068166	T	C	0.00686	PSMB2	-	TRUE	AluSc	SINE,Alu
chr16	10625058	T	C	2.66942E-12	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	109242607	G	A	0.00652	PRPF38B	+	FALSE
chr6	42094498	T	C	0.00931	C6orf132	-	TRUE	AluSq2	SINE,Alu
chr3	17200677	T	G	0.00371	TBC1D5	-	FALSE
chr3	20025677	G	T	0.00116	RAB5A,PP2D1	+,-	FALSE
chr3	73116345	T	A	5.66390E-05	PPP4R2	+	FALSE
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr1	6683582	C	A	0.00152	PHF13	+	FALSE
chr1	33149256	A	G	0.00286	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	46839477	T	C	0.00033	PIGF	-	FALSE
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE
chr2	128603114	T	C	0.00143		.	FALSE	AluSp	SINE,Alu
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr1	26143725	A	T	0.00116	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	16913677	T	C	0.00638	NBPF1	-	FALSE
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr8	87485483	G	C	0.00554	RMDN1	-	FALSE
chr7	29962664	A	C	0.00077	SCRN1	-	FALSE
chrX	3523050	C	A	0.00043	PRKX	-	FALSE
chr1	225977968	C	T	0.00490	SRP9	+	FALSE
chr1	46075664	A	G	0.00267	NASP	+	TRUE	AluSx4	SINE,Alu
chr3	184550501	A	G	0.00508	VPS8	+	FALSE
chr1	10518688	T	C	0.00341		.	FALSE	AluSx1	SINE,Alu
chr1	10517276	T	C	0.00779		.	FALSE	AluJr	SINE,Alu
chr1	16933629	A	G	0.00299	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	9161011	T	C	3.85416E-05		.	FALSE	AluJb	SINE,Alu
chr1	33086876	T	C	0.00672	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr3	189675270	T	G	0.00039	P3H2	-	FALSE
chr9	89627066	A	G	0.00588	LOC440173	-	FALSE
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr10	89623860	C	G	0.00071	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr1	45244053	A	G	0.00562	RPS8	+	FALSE
chr2	170497651	C	T	0.00195		.	FALSE
chr4	190864378	T	G	0.00247	FRG1	+	FALSE	GA-rich	SINE,Alu
chr2	192555178	C	T	0.00112	LOC105747689	+	FALSE
chr1	100440553	A	G	0.00179	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	77759578	A	G	0.00283	AK5	+	FALSE
chr12	15035081	T	C	0.00951	MGP	-	FALSE
chr19	12742506	A	G	2.74962E-05		.	FALSE	AluSx	SINE,Alu
chr6	150047430	T	C	0.00568	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr3	40578815	A	G	0.00041	ZNF621	+	FALSE	AluJr	SINE,Alu
chr2	75787917	G	C	0.00766	EVA1A	-	FALSE
chr1	28661767	A	G	0.00144	MED18	+	TRUE	AluSg	SINE,Alu
chr2	24494671	T	C	0.00244	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr6	24720271	T	G	0.00839		.	FALSE
chr1	155214017	C	A	0.00946	GBA	-	FALSE	AluSx3	SINE,Alu
chr1	19542239	T	C	0.00043	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	93617546	T	C	0.00026	TMED5	-	FALSE
chr4	89179595	T	C	0.00752	PPM1K	-	TRUE	AluSc	SINE,Alu
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	19953120	G	A	0.00212	MINOS1,MINOS1-NBL1	+	FALSE
chr5	128430757	T	C	0.00338	ISOC1	+	FALSE
chr1	46075663	A	G	0.00013	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	202029997	A	G	0.00335	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr2	37431563	A	G	0.00993	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr20	43954058	G	C	0.00876	SDC4	-	FALSE
chr3	160213317	T	A	0.00208	KPNA4	-	FALSE
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	15113694	T	C	0.00622	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	153521525	G	A	0.00013	LOC101928034,S100A3	+,-	FALSE
chr1	1650832	A	G	0.00241	CDK11B,CDK11A	-	FALSE
chr7	156763332	A	G	0.00090	NOM1	+	TRUE	AluSx	SINE,Alu
chr4	1305799	C	T	0.00271	MAEA	+	FALSE
chr5	137842895	A	T	0.00038	ETF1	-	FALSE
chr1	44088547	C	A	0.00018	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	209605640	A	C	0.00581	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr19	58375195	A	G	0.00080	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr2	9661424	G	C	0.00130	ADAM17	-	FALSE
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr6	42048297	A	G	0.00307	TAF8	+	TRUE	AluSq2	SINE,Alu
chr5	35878249	G	A	0.00421	IL7R	+	FALSE
chr1	214529725	T	C	0.00535	PTPN14	-	TRUE
chr2	38971059	A	C	0.00539	SRSF7	-	FALSE
chr3	33185522	C	A	1.53330E-10	CRTAP	+	FALSE	L2a	SINE,Alu
chr1	33148213	A	G	0.00080	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr5	126171974	C	T	0.00867	LMNB1	+	FALSE
chr1	228881190	T	G	0.00043	RHOU	+	FALSE
chr8	41401571	T	A	0.00240	LOC102723729,GINS4	+,-	FALSE
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr2	37328082	T	C	1.18454E-08		.	FALSE
chr14	20770036	T	C	0.00217	TTC5	-	FALSE
chr2	228421461	G	C	0.00069	AGFG1	+	FALSE
chr1	326499	A	G	0.00583		.	FALSE
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr4	109733172	T	C	0.00480	COL25A1	-	FALSE
chr1	144868170	C	T	0.00415	NBPF20,PDE4DIP	+,-	FALSE
chr6	13789450	T	C	0.00235	MCUR1	-	TRUE	AluSg	SINE,Alu
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr6	150046484	T	C	0.00953	NUP43	-	TRUE	AluSq2	SINE,Alu
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr1	94930345	G	A	0.00223	ABCD3	+	FALSE
chr2	24223142	A	G	0.00524	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr10	129216658	T	C	0.00710	DOCK1	+	FALSE
chr2	28002602	C	A	0.00037	MRPL33	+	FALSE
chr2	3605906	C	A	0.00982	RNASEH1	-	FALSE
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr3	196079293	T	C	0.00308		.	FALSE	AluSx	SINE,Alu
chr1	52381354	G	T	0.00157	RAB3B	-	FALSE
chr1	148556107	A	T	0.00288		.	FALSE
chr1	114306374	G	A	0.00124	RSBN1	-	FALSE
chr1	100654773	T	C	0.00810	DBT	-	TRUE	AluSz	SINE,Alu
chr18	2803231	A	T	0.00638	SMCHD1	+	FALSE
chr1	6583593	T	C	0.00088	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	1419823	A	G	0.00816	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	37327670	T	C	5.08697E-08		.	FALSE
chr1	6475348	C	A	4.73725E-05	HES2	-	FALSE	Tigger1	SINE,Alu
chr3	45267450	C	G	0.00036	TMEM158	-	FALSE
chr1	206566904	T	C	0.00322	SRGAP2	+	FALSE
chr15	41590291	A	C	0.00032	OIP5-AS1	+	FALSE
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr12	120898697	A	G	0.00488	GATC	+	TRUE	AluY	SINE,Alu
chr6	31657413	T	C	0.00066		.	FALSE
chr11	32623987	T	A	5.29256E-06	CCDC73,EIF3M	+,-	FALSE
chr3	69104669	C	T	0.00113	UBA3	-	FALSE
chr1	118166096	C	T	0.00861	FAM46C	+	FALSE
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	206516261	C	T	0.00020	SRGAP2	+	FALSE
chr1	45975286	A	G	0.00200	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	10520331	C	T	0.00043		.	FALSE	AluSx1	SINE,Alu
chr5	130537998	A	G	0.00380	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	24128467	C	T	0.00481	HMGCL	-	FALSE
chr3	195404649	A	G	0.00624	SDHAP2	+	FALSE
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chr1	6582558	T	C	0.00030	NOL9	-	TRUE	AluSx1	SINE,Alu
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr7	6063283	C	T	0.00032	AIMP2,EIF2AK1	+,-	FALSE
chr19	58356524	A	G	0.00026	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr4	165999188	T	C	0.00751	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE
chr1	31732599	T	G	0.00827	SNRNP40	-	FALSE
chr1	35650162	C	A	0.00106	SFPQ	-	FALSE
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145688664	A	T	0.00679	NBPF20,NBPF10,RNF115	+	FALSE
chr1	205737682	A	G	0.00320	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	94335191	C	T	0.00382	DNTTIP2	-	FALSE
chr1	65897981	G	A	0.00071	LEPR,LEPROT	+	FALSE
chr2	37331531	T	C	0.00389		.	FALSE	AluJb	SINE,Alu
chr2	130795675	C	T	0.00578	FAR2P1	-	FALSE
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	33149443	A	G	6.55200E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	37331565	T	C	0.00121		.	FALSE	AluJb	SINE,Alu
chr2	196999052	C	G	0.00358	STK17B	-	FALSE	MER1B	SINE,Alu
chr1	144828845	A	T	0.00178	NBPF20,NBPF9	+	FALSE
chr5	125961649	A	G	3.29658E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	28826128	A	G	0.00483	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr6	13790822	T	C	0.00885	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr2	32534897	A	G	0.00111		.	FALSE	AluSx1	SINE,Alu
chr1	40213234	A	G	0.00146	PPIE	+	TRUE	AluSx3	SINE,Alu
chr1	204393480	T	A	0.00783	PIK3C2B	-	FALSE
chr7	1199790	G	C	0.00049	ZFAND2A	-	FALSE
chr1	9642830	T	A	0.00059	SLC25A33	+	FALSE
chr3	37317605	A	G	9.02711E-05	GOLGA4	+	FALSE
chr1	36770605	C	T	0.00971	THRAP3	+	FALSE	(T)n	SINE,Alu
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr7	91630349	T	A	0.00111	AKAP9	+	FALSE
chr1	145513031	A	G	0.00705	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	10520487	T	C	0.00559		.	FALSE	AluSx1	SINE,Alu
chr2	26477130	T	C	0.00501	HADHB	+	FALSE
chr1	202984020	A	T	0.00842	TMEM183A,TMEM183B	+	FALSE
chr3	183209052	T	C	0.00041	KLHL6	-	TRUE	AluSq	SINE,Alu
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr19	51305796	T	C	0.00212	C19orf48	-	TRUE	AluSg	SINE,Alu
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	46828700	A	G	0.00095	NSUN4	+	FALSE
chr1	10042988	A	G	0.00359	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	185646406	A	T	0.00023	TRA2B	-	FALSE
chr1	44401225	T	C	0.00802	ARTN	+	FALSE
chrX	123046302	A	G	0.00649	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	10042987	A	G	0.00149	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr11	119533726	A	G	0.00169	NECTIN1	-	FALSE
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr2	37331038	T	C	0.00261		.	FALSE	AluSx1	SINE,Alu
chr1	51822219	G	A	0.00223	EPS15	-	FALSE
chr8	104082307	C	T	0.00675	ATP6V1C1	+	FALSE	L1ME3G	SINE,Alu
chrX	23721424	G	C	0.00651		.	FALSE
chr3	43098969	T	G	0.00596	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	990773	C	T	0.00486	AGRN	+	FALSE
chr1	24798498	C	T	0.00131	NIPAL3	+	FALSE
chr11	118965479	G	A	0.00682	H2AFX	-	FALSE	G-rich	SINE,Alu
chr19	42376872	A	G	0.00647		.	FALSE	AluSp	SINE,Alu
chr1	168220427	A	G	0.00670		.	FALSE	AluSz6	SINE,Alu
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr1	61921200	A	T	0.00177	NFIA	+	FALSE
chr1	214529247	T	C	0.00233	PTPN14	-	TRUE
chr1	16641899	C	T	0.00213	FBXO42	-	FALSE
chr5	147793406	A	G	0.00323	FBXO38	+	FALSE
chr1	214524633	T	A	0.00017	PTPN14	-	FALSE	Alu	SINE,Alu
chr3	57551513	A	G	0.00037	PDE12	+	TRUE	AluSc	SINE,Alu
chr1	22159774	G	A	0.00257	HSPG2	-	FALSE
chr17	5336210	T	C	0.00868	RPAIN,C1QBP	+,-	FALSE
chr10	114209888	A	G	0.00386	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr14	74524944	T	C	0.00567	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr1	161559407	A	G	0.00237	FCGR2C	+	FALSE
chrX	84532996	T	G	0.00801	POF1B	-	FALSE
chr1	40219065	C	T	0.00232	PPIE	+	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr3	137787047	C	T	0.00735	DZIP1L	-	FALSE
chr5	149823795	A	T	0.00722	RPS14	-	FALSE
chr1	33148736	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	114443475	A	G	0.00538	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr4	119553307	T	C	0.00096	LOC729218	+	FALSE
chr3	52800284	T	C	6.08396E-05	NEK4	-	FALSE
chr1	179044110	A	G	0.00931	FAM20B	+	TRUE	AluSx	SINE,Alu
chr2	9629305	A	T	0.00591	ADAM17	-	FALSE
chr1	40759231	A	G	0.00168	ZMPSTE24	+	FALSE
chr7	2274209	T	C	0.00578	MRM2	-	FALSE	AluJr	SINE,Alu
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr3	48787757	T	C	0.00605	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr3	157161198	A	T	0.00486	VEPH1,PTX3	+,-	FALSE
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr1	156107534	C	T	0.00168	LMNA	+	FALSE
chr1	33148287	A	G	0.00052	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr20	35409827	T	C	0.00267	SOGA1	-	TRUE	AluSx	SINE,Alu
chr3	86992161	C	G	0.00050	VGLL3	-	FALSE	(GT)n	SINE,Alu
chr1	148251079	T	C	0.00880	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr21	46353985	A	G	0.00985	LINC01547	-	FALSE	MER5A	SINE,Alu
chr1	3545200	G	A	0.00381	TPRG1L	+	FALSE
chr1	27205214	T	C	0.00048		.	FALSE	AluSc	SINE,Alu
chr3	15113810	T	C	0.00201	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	145689028	A	G	9.93195E-07	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr3	44791320	T	C	0.00059	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	101444071	G	A	0.00963	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr1	203839213	T	A	0.00800	SNRPE	+	FALSE
chr3	33909025	A	T	0.00796	PDCD6IP	+	FALSE
chr3	39137793	C	T	0.00363	WDR48	+	FALSE
chr19	49468569	G	T	0.00266	FTL	+	FALSE
chr1	10042988	A	G	4.26240E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	29170756	A	T	0.00573	WDR43	+	FALSE
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	3729217	T	C	0.00119	CEP104	-	TRUE	AluSx3	SINE,Alu
chr9	115448785	C	T	0.00195	INIP	-	FALSE	AluSz	SINE,Alu
chr5	44819912	A	G	0.00176		.	FALSE	AluSz	SINE,Alu
chr1	21544601	C	T	0.00196	ECE1	-	FALSE
chr4	10442610	T	C	0.00174	ZNF518B	-	FALSE
chr1	16574382	A	C	0.00704	FBXO42	-	FALSE
chr1	148003756	T	C	0.00162	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr2	38971644	T	G	0.00239	SRSF7	-	FALSE
chr3	24163645	C	G	1.00972E-05	THRB	-	FALSE
chr7	35840866	A	G	0.00947	SEPT7	+	FALSE
chr3	15113655	T	C	6.08503E-07	RBSN	-	TRUE	AluSz6	SINE,Alu
chr3	20195395	C	T	3.65176E-06	KAT2B	+	FALSE
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr1	28939803	C	T	1.99823E-11	TAF12	-	FALSE
chr1	121134204	G	T	0.00557	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr19	19793875	A	G	0.00198	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	27107669	T	A	0.00636	ARID1A	+	FALSE	(A)n	SINE,Alu
chr1	54382632	T	C	0.00219		.	FALSE	AluSq2	SINE,Alu
chr8	27661035	T	A	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr2	74333232	C	T	0.00274	TET3	+	FALSE
chr3	156258230	T	C	0.00176	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	16717888	G	A	0.00979	SZRD1	+	FALSE
chr3	179117266	T	C	0.00111	GNB4	-	TRUE	AluSz	SINE,Alu
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr2	176789423	C	A	0.00441	LNPK	-	FALSE	MSTB1	SINE,Alu
chr1	16889633	T	C	0.00217	NBPF1	-	TRUE
chr1	40537942	A	C	0.00955	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	32661615	A	T	0.00033	TXLNA	+	FALSE
chr1	26901090	C	T	0.00056	RPS6KA1	+	FALSE
chr1	1650797	A	G	0.00325	CDK11B,CDK11A	-	FALSE
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr1	36068369	T	C	0.00012	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	52817399	T	C	0.00346	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	10520099	T	C	5.82547E-06		.	FALSE	AluSx	SINE,Alu
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr3	15296358	A	T	4.17447E-06	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr1	55207982	C	A	0.00063	MROH7-TTC4,TTC4	+	FALSE
chr4	7762356	G	A	3.36293E-10	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	220154768	C	T	0.00067	RNU5F-1,EPRS	+,-	FALSE
chr1	9162223	T	C	0.00778		.	FALSE	AluSx	SINE,Alu
chr1	26606589	C	G	0.00420	SH3BGRL3	+	FALSE
chr1	10042988	A	G	3.32241E-06	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	118472402	T	G	0.00342	WDR3	+	FALSE
chr1	184762676	T	C	0.00720	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	128602366	T	C	0.00236		.	FALSE	AluSq2	SINE,Alu
chr1	45975345	A	G	0.00120	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	53712727	C	T	0.00313	LRP8	-	FALSE
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chrX	77083941	T	C	0.00271	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	144521099	A	G	0.00196	NBPF20	+	FALSE
chr1	16933623	G	A	0.00789	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr2	232319529	T	A	1.32288E-06	NCL	-	FALSE
chr1	35650014	C	A	0.00012	SFPQ	-	FALSE
chr2	101638888	A	G	0.00127	TBC1D8	-	FALSE
chr1	179044180	A	G	0.00416	FAM20B	+	TRUE	AluSx	SINE,Alu
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr1	145512073	A	G	0.00066	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr20	57603729	A	T	0.00444		.	FALSE
chrX	123045407	A	G	0.00153	XIAP	+	TRUE	AluJo	SINE,Alu
chr18	212601	C	A	0.00189	USP14	+	FALSE	AluSz	SINE,Alu
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr7	26708303	G	T	0.00095	SKAP2	-	FALSE	AluSx3	SINE,Alu
chr1	16889596	T	C	0.00640	NBPF1	-	TRUE
chr2	174090332	A	C	0.00918	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr3	15112398	T	C	2.78799E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr3	156259314	T	C	2.71784E-05	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	120163248	G	A	0.00711	ZNF697	-	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr17	73885939	T	C	0.00612	TRIM65	-	TRUE	AluJr	SINE,Alu
chr1	24934334	A	G	0.00031	NCMAP	+	TRUE	AluSz6	SINE,Alu
chr1	10517953	T	A	0.00535		.	FALSE
chr1	173834149	A	C	0.00265	GAS5	-	FALSE	AluSz	SINE,Alu
chr1	155282600	A	G	0.00019	FDPS	+	TRUE	AluSp	SINE,Alu
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr11	31452571	A	G	0.00084	DNAJC24	+	TRUE
chr1	145512024	A	G	0.00041	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr15	90819472	A	G	0.00068		.	FALSE	AluSx	SINE,Alu
chr5	141691252	T	C	0.00596	SPRY4	-	FALSE
chr16	10623706	T	C	0.00064	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	145512944	A	G	0.00110	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr11	9466935	T	G	0.00439	IPO7	+	FALSE
chr1	144833382	C	T	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr4	155457049	T	A	0.00434	PLRG1	-	FALSE	L2d2	SINE,Alu
chr8	124027562	C	T	0.00674	DERL1	-	FALSE
chr1	52498139	A	G	0.00193	TXNDC12,KTI12	-	FALSE
chr1	28824360	A	G	0.00971	PHACTR4	+	TRUE	AluSx3	SINE,Alu
chr3	182637840	C	T	1.61172E-05	ATP11B	+	FALSE
chr1	120695554	G	A	0.00492		.	FALSE
chr1	205686523	G	T	0.00640	NUCKS1	-	FALSE
chr2	55462747	T	A	0.00163	RPS27A	+	FALSE
chr2	128063697	G	A	0.00775	MAP3K2	-	FALSE
chr1	89851328	A	G	0.00028	GBP6	+	FALSE	AluSz	SINE,Alu
chr1	8412989	A	G	0.00190	RERE	-	FALSE
chr1	204521625	A	G	0.00808	MDM4	+	TRUE	AluSg	SINE,Alu
chr5	52389815	A	G	0.00486	ITGA2	+	TRUE
chr1	53288897	A	G	0.00299	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr4	17802920	T	C	0.00805	DCAF16	-	TRUE	AluSz	SINE,Alu
chr4	129795661	A	T	0.00165	JADE1	+	FALSE
chr1	36067925	T	C	0.00103	PSMB2	-	TRUE	AluSz	SINE,Alu
chr17	28963296	A	G	0.00572	LOC107133515	+	TRUE	AluJr4	SINE,Alu
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr3	172115589	G	T	0.00435	FNDC3B	+	FALSE
chr1	36068210	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr10	60047611	G	A	0.00855	CISD1	+	FALSE	(A)n	SINE,Alu
chr3	40353799	G	T	0.00906	EIF1B	+	FALSE
chr1	6582558	T	C	0.00479	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	204526713	A	G	0.00078	MDM4	+	TRUE	AluSx	SINE,Alu
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr5	10265488	A	G	0.00120	CCT5	+	FALSE
chr3	86993604	G	T	0.00253	VGLL3	-	FALSE	AluJo	SINE,Alu

RBP	HNRNPU
Knock-Method	shRNA
RBP Family	SAP
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR047IUS
Platform	HiSeq
Pubmed ID	32252787

HNRNPU - Target Gene Network