| RBP | PUM1 |
| Knock-Method | shRNA |
| RBP Family | PUF |
| Biosample Name | HepG2 |
| Tissue Type | Liver |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR945XKW |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr1 | 9163393 | T | C | 0.00327 | . | FALSE | AluSp | SINE,Alu | |
| chr1 | 10519982 | T | C | 0.00417 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 117644949 | C | G | 0.00440 | TTF2 | + | FALSE | ||
| chr1 | 53288862 | A | G | 0.00799 | ZYG11B | + | TRUE | AluJo | SINE,Alu |
| chr19 | 21366997 | A | G | 0.00727 | ZNF431 | + | TRUE | AluSc | SINE,Alu |
| chr2 | 47703548 | G | A | 5.05442E-05 | MSH2 | + | FALSE | ||
| chr1 | 1252510 | T | C | 1.62601E-05 | CPSF3L | - | TRUE | AluSp | SINE,Alu |
| chr1 | 54571374 | A | G | 0.00916 | TCEANC2 | + | TRUE | AluSc | SINE,Alu |
| chr3 | 194361768 | C | T | 1.49766E-06 | LSG1 | - | FALSE | MSTA | SINE,Alu |
| chr2 | 128950515 | A | G | 0.00052 | UGGT1 | + | TRUE | AluSc | SINE,Alu |
| chr1 | 10520649 | T | C | 0.00629 | DFFA | - | TRUE | AluSc8 | SINE,Alu |
| chr8 | 91637754 | A | T | 0.00297 | TMEM64 | - | FALSE | ||
| chr19 | 39926509 | A | C | 0.00986 | RPS16 | - | FALSE | ||
| chr1 | 36067821 | T | C | 8.78017E-05 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 206578650 | G | C | 0.00159 | SRGAP2 | + | FALSE | ||
| chr1 | 148561089 | T | C | 0.00011 | NBPF15 | + | FALSE | ||
| chr20 | 25428348 | A | G | 0.00121 | GINS1 | + | TRUE | AluSz | SINE,Alu |
| chr6 | 52868087 | T | C | 0.00594 | ICK | - | TRUE | MER135 | SINE,Alu |
| chr12 | 56532056 | G | C | 0.00743 | ESYT1 | + | FALSE | ||
| chr3 | 101542436 | A | G | 0.00023 | NXPE3 | + | TRUE | AluJr | SINE,Alu |
| chr1 | 185069687 | C | T | 0.00072 | RNF2 | + | FALSE | ||
| chr1 | 156206121 | G | A | 0.00423 | PMF1-BGLAP,PMF1 | + | FALSE | ||
| chr5 | 17276080 | A | C | 0.00298 | BASP1 | + | FALSE | (TC)n | SINE,Alu |
| chr2 | 61277775 | A | G | 0.00113 | PEX13 | + | TRUE | AluY | SINE,Alu |
| chr1 | 150704633 | T | C | 0.00080 | CTSS | - | TRUE | AluJo | SINE,Alu |
| chr5 | 65452100 | G | T | 0.00600 | SREK1 | + | FALSE | (TTTTTG)n | SINE,Alu |
| chr1 | 16893721 | A | C | 0.00179 | NBPF1 | - | FALSE | ||
| chr1 | 27205214 | T | C | 0.00048 | . | FALSE | AluSc | SINE,Alu | |
| chr1 | 67874689 | T | C | 0.00146 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr2 | 171699153 | C | G | 0.00247 | GAD1 | + | FALSE | ||
| chr3 | 196670090 | G | A | 6.78352E-09 | NCBP2-AS2 | + | FALSE | ||
| chr1 | 185014720 | A | G | 0.00989 | RNF2 | + | FALSE | ||
| chr6 | 150047376 | T | C | 0.00306 | NUP43 | - | TRUE | AluSc | SINE,Alu |
| chr3 | 75779619 | T | A | 0.00061 | ZNF717 | - | FALSE | ||
| chr1 | 26143725 | A | T | 0.00116 | SEPN1 | + | FALSE | AluSx | SINE,Alu |
| chr1 | 38423183 | C | T | 0.00210 | SF3A3 | - | FALSE | AluJo | SINE,Alu |
| chr1 | 19953129 | T | A | 0.00934 | MINOS1,MINOS1-NBL1 | + | FALSE | ||
| chr2 | 128602507 | T | C | 4.02376E-05 | . | FALSE | AluSq2 | SINE,Alu | |
| chr2 | 201774244 | T | C | 0.00332 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 10521238 | T | C | 0.00795 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr2 | 188330323 | T | G | 0.00162 | TFPI | - | FALSE | L2 | SINE,Alu |
| chr19 | 59093999 | A | G | 0.00018 | CENPBD1P1 | + | TRUE | AluY | SINE,Alu |
| chr1 | 59249682 | G | A | 0.00074 | JUN | - | FALSE | ||
| chr2 | 65496187 | G | A | 0.00266 | ACTR2 | + | FALSE | ||
| chr2 | 238678004 | A | G | 0.00631 | LRRFIP1 | + | FALSE | ||
| chr1 | 225684742 | T | C | 0.00518 | ENAH | - | FALSE | ||
| chr1 | 67874252 | C | A | 0.00558 | SERBP1 | - | FALSE | ||
| chr2 | 69689663 | T | C | 0.00091 | AAK1 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 10517313 | T | C | 0.00661 | . | FALSE | AluJr | SINE,Alu | |
| chr2 | 85547772 | G | C | 0.00871 | TGOLN2 | - | FALSE | ||
| chr1 | 144595943 | A | G | 0.00050 | NBPF20 | + | FALSE | AluJb | SINE,Alu |
| chr1 | 6283305 | T | C | 0.00129 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr5 | 115165731 | T | C | 5.24208E-07 | ATG12 | - | TRUE | AluSq2 | SINE,Alu |
| chr2 | 30381505 | T | C | 0.00820 | YPEL5 | + | FALSE | ||
| chr1 | 148003752 | T | C | 0.00015 | NBPF8 | - | TRUE | L1MC4 | SINE,Alu |
| chr5 | 93018884 | A | C | 0.00030 | FAM172A | - | FALSE | (TCA)n | SINE,Alu |
| chr1 | 19542631 | T | C | 0.00031 | LOC101927895,EMC1 | +,- | FALSE | FRAM | SINE,Alu |
| chr1 | 12024235 | C | T | 0.00395 | PLOD1 | + | FALSE | ||
| chr1 | 67874859 | T | C | 0.00209 | SERBP1 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 101443701 | A | G | 0.00749 | SLC30A7 | + | FALSE | ||
| chr3 | 10193683 | T | G | 0.00681 | VHL | + | FALSE | AluJr | SINE,Alu |
| chr1 | 9161231 | T | C | 0.00481 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 145292925 | C | T | 0.00817 | NBPF20 | + | FALSE | ||
| chr10 | 104417856 | T | A | 0.00616 | TRIM8 | + | FALSE | (AAT)n | SINE,Alu |
| chr1 | 143915747 | G | A | 0.00603 | . | FALSE | |||
| chr1 | 28662057 | A | G | 3.94650E-05 | MED18 | + | TRUE | AluSq2 | SINE,Alu |
| chrX | 3526616 | G | A | 0.00971 | PRKX | - | FALSE | ||
| chr15 | 78841543 | T | A | 0.00438 | PSMA4 | + | FALSE | ||
| chr1 | 9161365 | T | C | 4.68504E-05 | . | FALSE | AluSx | SINE,Alu | |
| chr2 | 65496144 | A | G | 0.00883 | ACTR2 | + | FALSE | ||
| chr1 | 19198414 | G | A | 0.00028 | ALDH4A1 | - | FALSE | ||
| chr8 | 92075904 | T | C | 0.00242 | OTUD6B-AS1 | - | FALSE | LTR67B | SINE,Alu |
| chr1 | 1654038 | G | A | 0.00290 | CDK11B,CDK11A | - | FALSE | ||
| chr1 | 244572644 | G | C | 0.00033 | ADSS | - | FALSE | ||
| chr11 | 61732461 | G | T | 2.02182E-05 | FTH1 | - | FALSE | ||
| chr3 | 141879765 | T | C | 0.00212 | GK5 | - | TRUE | AluJr | SINE,Alu |
| chr3 | 69104669 | C | T | 0.00113 | UBA3 | - | FALSE | ||
| chr17 | 7257878 | A | G | 0.00027 | KCTD11 | + | FALSE | ||
| chr22 | 18572597 | A | G | 0.00322 | PEX26 | + | TRUE | AluYf1 | SINE,Alu |
| chr1 | 16889624 | T | C | 0.00794 | NBPF1 | - | TRUE | ||
| chr3 | 189712010 | G | A | 1.42873E-07 | P3H2 | - | FALSE | ||
| chr5 | 137842895 | A | T | 0.00038 | ETF1 | - | FALSE | ||
| chr5 | 32404176 | C | T | 0.00342 | ZFR | - | FALSE | ||
| chr1 | 33150598 | T | C | 4.12722E-05 | SYNC,RBBP4 | +,- | FALSE | ||
| chr1 | 228682330 | C | G | 0.00509 | RNF187 | + | FALSE | ||
| chr1 | 148561090 | G | A | 8.62202E-05 | NBPF15 | + | FALSE | ||
| chr1 | 28861636 | G | A | 0.00754 | RCC1 | + | FALSE | (GCATGT)n | SINE,Alu |
| chr1 | 151092875 | A | G | 0.00154 | GABPB2 | + | TRUE | AluSp | SINE,Alu |
| chr2 | 202242616 | G | A | 0.00880 | TRAK2 | - | FALSE | ||
| chr15 | 42860120 | A | G | 0.00045 | HAUS2 | + | TRUE | AluSg | SINE,Alu |
| chrX | 123047168 | A | G | 2.82326E-05 | XIAP | + | TRUE | AluSx | SINE,Alu |
| chr1 | 120455441 | A | G | 0.00872 | NOTCH2 | - | FALSE | ||
| chr1 | 931935 | T | C | 0.00796 | . | FALSE | |||
| chr1 | 19440460 | C | T | 0.00073 | UBR4 | - | FALSE | ||
| chr1 | 145500918 | T | C | 0.00127 | NBPF20,NBPF10,LIX1L | + | FALSE | ||
| chr5 | 14510067 | G | T | 0.00130 | TRIO | + | FALSE | ||
| chr2 | 86252043 | T | C | 0.00909 | POLR1A | - | TRUE | AluSq2 | SINE,Alu |
| chr14 | 20923558 | A | C | 0.00373 | APEX1 | + | FALSE | ||
| chr17 | 27872313 | T | C | 0.00226 | TAOK1 | + | FALSE | ||
| chr1 | 29519736 | T | C | 0.00610 | MECR | - | TRUE | AluJb | SINE,Alu |
| chr1 | 109746825 | A | G | 0.00281 | KIAA1324 | + | TRUE | AluJb | SINE,Alu |
| chr17 | 74560725 | T | C | 0.00476 | SNHG16 | + | FALSE | THE1B | SINE,Alu |
| chr1 | 206566948 | G | A | 0.00568 | SRGAP2 | + | FALSE | ||
| chr4 | 39550549 | T | C | 0.00014 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr2 | 47130527 | G | A | 0.00462 | MCFD2 | - | FALSE | ||
| chr1 | 11734730 | C | T | 4.90909E-09 | MAD2L2 | - | FALSE | ||
| chr1 | 233514975 | G | T | 0.00584 | MLK4 | + | FALSE | ||
| chr1 | 11084103 | T | A | 0.00968 | TARDBP | + | FALSE | ||
| chr9 | 137330709 | G | T | 0.00965 | RXRA | + | FALSE | (GCTG)n | SINE,Alu |
| chr2 | 39212565 | T | G | 0.00662 | SOS1 | - | FALSE | ||
| chr1 | 16529004 | A | C | 3.00007E-07 | ARHGEF19 | - | FALSE | ||
| chr1 | 100548868 | T | C | 0.00114 | MFSD14A | + | FALSE | ||
| chr1 | 23636274 | G | T | 0.00165 | HNRNPR | - | FALSE | ||
| chr1 | 6583066 | T | C | 0.00209 | NOL9 | - | TRUE | AluSx4 | SINE,Alu |
| chr6 | 38140505 | A | G | 0.00109 | BTBD9 | - | FALSE | ||
| chr1 | 53291420 | A | G | 6.80791E-05 | ZYG11B | + | TRUE | AluJr | SINE,Alu |
| chr3 | 40577810 | A | G | 0.00896 | ZNF621 | + | TRUE | AluSz | SINE,Alu |
| chr4 | 2940265 | T | C | 4.71601E-06 | NOP14-AS1,NOP14 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 204524950 | A | G | 4.72439E-07 | MDM4 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 112003958 | T | A | 0.00557 | ATP5F1 | + | FALSE | Helitron2Na_Mam | SINE,Alu |
| chr1 | 10520202 | T | C | 0.00529 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 87170493 | T | G | 0.00345 | SH3GLB1 | + | FALSE | ||
| chr1 | 19542456 | T | C | 0.00193 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 214529740 | T | C | 0.00356 | PTPN14 | - | TRUE | ||
| chr17 | 73885248 | T | C | 0.00017 | TRIM65 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 230416410 | G | T | 0.00516 | GALNT2 | + | FALSE | ||
| chr1 | 11346336 | A | G | 0.00288 | UBIAD1 | + | FALSE | ||
| chr1 | 10520669 | T | C | 0.00022 | DFFA | - | FALSE | AluSc8 | SINE,Alu |
| chr3 | 32496328 | C | A | 0.00013 | CMTM7 | + | FALSE | ||
| chr2 | 102793246 | A | G | 0.00904 | IL1R1 | + | FALSE | ||
| chr6 | 27860480 | G | A | 0.00908 | HIST1H2AM | - | FALSE | ||
| chr1 | 10093371 | C | T | 0.00264 | UBE4B | + | FALSE | ||
| chr1 | 24296849 | T | C | 0.00125 | . | FALSE | |||
| chr3 | 49396751 | T | C | 0.00000 | RHOA | - | FALSE | ||
| chr1 | 64114301 | T | C | 0.00955 | PGM1 | + | FALSE | ||
| chr6 | 42854681 | A | G | 0.00011 | RPL7L1 | + | TRUE | AluSc | SINE,Alu |
| chr7 | 35840866 | A | G | 0.00947 | SEPT7 | + | FALSE | ||
| chr2 | 172178540 | T | C | 0.00040 | METTL8 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 110136458 | A | G | 0.00136 | GNAI3 | + | FALSE | ||
| chr1 | 240255561 | G | A | 0.00224 | FMN2 | + | FALSE | (GGC)n | SINE,Alu |
| chr2 | 233446265 | T | C | 0.00177 | EIF4E2 | + | FALSE | ||
| chr5 | 92956173 | C | T | 0.00646 | FAM172A | - | FALSE | ||
| chr1 | 145281656 | A | T | 0.00768 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 100489297 | G | C | 0.00669 | SLC35A3 | + | FALSE | AluSc | SINE,Alu |
| chr2 | 153512503 | C | T | 0.00082 | PRPF40A | - | FALSE | ||
| chr19 | 46053172 | T | C | 0.00098 | OPA3 | - | TRUE | AluSx1 | SINE,Alu |
| chr12 | 123253711 | A | G | 0.00066 | DENR | + | TRUE | (AT)n | SINE,Alu |
| chr1 | 36068276 | T | C | 5.36857E-05 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr3 | 107765249 | T | C | 0.00156 | CD47 | - | FALSE | ||
| chr1 | 6283550 | A | T | 0.00225 | ICMT | - | FALSE | ||
| chr3 | 156259317 | T | C | 0.00189 | SSR3 | - | TRUE | AluSq2 | SINE,Alu |
| chr5 | 40852810 | G | T | 0.00276 | CARD6 | + | FALSE | ||
| chr13 | 32973012 | A | C | 0.00231 | BRCA2 | + | FALSE | ||
| chr1 | 113240711 | G | A | 0.00454 | MOV10 | + | FALSE | ||
| chr1 | 65901227 | A | T | 0.00914 | LEPR,LEPROT | + | FALSE | AluYh3 | SINE,Alu |
| chr5 | 125961210 | A | G | 0.00966 | PHAX | + | TRUE | AluSz | SINE,Alu |
| chr1 | 16892275 | C | T | 0.00087 | NBPF1 | - | FALSE | ||
| chr7 | 20178434 | T | C | 0.00178 | MACC1,LOC101927668 | - | TRUE | AluY | SINE,Alu |
| chr1 | 35648710 | G | C | 0.00377 | SFPQ | - | FALSE | ||
| chrX | 77083116 | T | C | 0.00658 | MAGT1 | - | TRUE | AluSg | SINE,Alu |
| chr2 | 183622547 | T | G | 0.00346 | DNAJC10 | + | FALSE | ||
| chr12 | 98942808 | A | G | 0.00019 | TMPO | + | TRUE | AluSc | SINE,Alu |
| chr6 | 160101733 | T | C | 0.00784 | SOD2 | - | TRUE | AluSz | SINE,Alu |
| chr5 | 175816759 | T | A | 0.00018 | . | FALSE | |||
| chr1 | 26755536 | A | G | 0.00515 | LIN28A | + | TRUE | AluSc | SINE,Alu |
| chr2 | 91847987 | C | G | 0.00083 | . | FALSE | TAR1 | SINE,Alu | |
| chr1 | 93308168 | T | A | 0.00314 | FAM69A | - | FALSE | ||
| chr1 | 36068325 | T | C | 0.00049 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 149816373 | G | A | 0.00364 | . | FALSE | (A)n | SINE,Alu | |
| chr1 | 1421531 | C | A | 0.00409 | ATAD3B | + | FALSE | ||
| chr1 | 89271574 | T | C | 0.00074 | PKN2 | + | FALSE | ||
| chr1 | 3545196 | T | C | 0.00035 | TPRG1L | + | FALSE | ||
| chr9 | 130268408 | T | C | 0.00416 | FAM129B | - | FALSE | (CTCA)n | SINE,Alu |
| chr3 | 53220215 | G | A | 2.78975E-05 | PRKCD | + | FALSE | ||
| chr8 | 145159706 | C | G | 0.00561 | MAF1 | + | FALSE | ||
| chr6 | 31601344 | T | C | 0.00569 | . | FALSE | |||
| chr1 | 40537941 | A | C | 0.00489 | CAP1 | + | FALSE | (A)n | SINE,Alu |
| chr6 | 26095462 | A | G | 0.00113 | HFE | + | TRUE | AluY | SINE,Alu |
| chr1 | 59122871 | C | T | 0.00863 | MYSM1 | - | FALSE | ||
| chr1 | 179326847 | A | G | 0.00577 | SOAT1 | + | TRUE | AluJo | SINE,Alu |
| chr12 | 125512541 | A | G | 6.52088E-06 | . | FALSE | |||
| chr2 | 113287424 | T | A | 0.00616 | TTL | + | FALSE | ||
| chr2 | 128620437 | T | A | 0.00388 | AMMECR1L | - | FALSE | ||
| chr3 | 81539382 | C | T | 1.63276E-05 | GBE1 | - | FALSE | ||
| chr2 | 128952006 | A | G | 0.00076 | UGGT1 | + | TRUE | AluSx1 | SINE,Alu |
| chr13 | 111111173 | G | A | 0.00224 | COL4A2,COL4A2-AS2 | +,- | FALSE | ||
| chr3 | 197611758 | A | G | 0.00958 | . | FALSE | FLAM_C | SINE,Alu | |
| chr1 | 3731655 | G | T | 0.00985 | CEP104 | - | FALSE | ||
| chr5 | 122359494 | G | C | 0.00043 | PPIC | - | FALSE | ||
| chr1 | 151966348 | C | T | 0.00511 | S100A10 | - | FALSE | ||
| chr1 | 10519951 | T | C | 0.00499 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 148252785 | T | C | 0.00314 | NBPF8,NBPF14,NBPF9 | - | FALSE | ||
| chr1 | 1252309 | A | T | 0.00403 | CPSF3L | - | FALSE | AluSx | SINE,Alu |
| chr11 | 65404868 | T | G | 0.00022 | PCNX3 | + | FALSE | ||
| chr1 | 1662764 | T | C | 0.00505 | SLC35E2 | - | TRUE | AluY | SINE,Alu |
| chr1 | 6582353 | T | C | 0.00121 | NOL9 | - | TRUE | AluSx1 | SINE,Alu |
| chr1 | 155181396 | A | G | 0.00209 | MTX1 | + | FALSE | ||
| chr1 | 54571491 | A | G | 0.00538 | TCEANC2 | + | TRUE | AluSc | SINE,Alu |
| chr3 | 88104162 | T | C | 0.00106 | CGGBP1 | - | FALSE | ||
| chr4 | 2940135 | T | C | 5.42423E-07 | NOP14-AS1,NOP14 | +,- | FALSE | AluSp | SINE,Alu |
| chr1 | 10518616 | G | A | 0.00379 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 16933643 | A | G | 0.00279 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr1 | 148251009 | T | C | 0.00065 | NBPF8,NBPF14,NBPF9 | - | TRUE | ||
| chr17 | 4929861 | A | G | 0.00705 | KIF1C | + | TRUE | AluJb | SINE,Alu |
| chr6 | 7289958 | C | G | 0.00893 | SSR1 | - | FALSE | ||
| chr1 | 205272926 | C | T | 0.00690 | NUAK2 | - | FALSE | ||
| chr11 | 94801636 | C | G | 0.00522 | SRSF8 | + | FALSE | ||
| chr4 | 177252327 | A | G | 3.52508E-05 | SPCS3 | + | TRUE | ||
| chr1 | 36642420 | T | C | 0.00162 | MAP7D1 | + | FALSE | ||
| chr1 | 21810575 | T | C | 0.00827 | NBPF3 | + | FALSE | ||
| chr3 | 105294534 | A | G | 1.10929E-06 | ALCAM | + | FALSE | ||
| chr1 | 54563156 | A | G | 3.59804E-06 | TCEANC2 | + | FALSE | ||
| chr1 | 143189473 | C | A | 0.00626 | LOC102723769 | - | FALSE | ||
| chr4 | 128756579 | A | G | 0.00501 | . | FALSE | AluSx | SINE,Alu | |
| chr5 | 52388460 | A | T | 0.00034 | ITGA2 | + | FALSE | ||
| chr8 | 41399648 | A | G | 0.00037 | LOC102723729,GINS4 | +,- | FALSE | AluSx3 | SINE,Alu |
| chr7 | 65844563 | G | A | 0.00581 | LINC00174 | - | FALSE | ||
| chr12 | 133298465 | A | G | 5.98085E-08 | PGAM5 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 86852621 | A | G | 0.00930 | ODF2L | - | FALSE | ||
| chr2 | 28002602 | C | A | 0.00037 | MRPL33 | + | FALSE | ||
| chr1 | 225974581 | A | G | 0.00732 | SRP9 | + | TRUE | AluJr | SINE,Alu |
| chr21 | 33974094 | C | T | 0.00880 | C21orf59 | - | FALSE | ||
| chr1 | 204189357 | C | T | 0.00835 | PLEKHA6 | - | FALSE | ||
| chr3 | 124948045 | G | C | 0.00784 | ZNF148 | - | FALSE | ||
| chr1 | 45975498 | A | G | 9.09033E-05 | MMACHC | + | TRUE | AluSx4 | SINE,Alu |
| chr16 | 10625414 | T | C | 0.00015 | EMP2 | - | TRUE | AluSx | SINE,Alu |
| chr9 | 115448785 | C | T | 0.00195 | INIP | - | FALSE | AluSz | SINE,Alu |
| chr1 | 10519200 | T | C | 0.00059 | . | FALSE | AluSx3 | SINE,Alu | |
| chr1 | 245017462 | G | A | 0.00255 | HNRNPU,SNORA100 | - | FALSE | ||
| chr4 | 17488244 | G | A | 0.00030 | QDPR | - | FALSE | ||
| chr3 | 9848222 | A | T | 0.00083 | ARPC4,ARPC4-TTLL3 | + | FALSE | ||
| chr1 | 92862836 | A | G | 0.00430 | . | FALSE | AluJr | SINE,Alu | |
| chrX | 2825119 | T | C | 0.00670 | ARSD | - | TRUE | AluSx1 | SINE,Alu |
| chr1 | 160967857 | T | C | 0.00806 | F11R | - | TRUE | AluSp | SINE,Alu |
| chr1 | 569803 | G | A | 0.00166 | . | FALSE | |||
| chr3 | 10193796 | A | G | 2.82806E-06 | VHL | + | TRUE | AluSx | SINE,Alu |
| chr1 | 27338911 | C | T | 0.00455 | FAM46B | - | FALSE | ||
| chr1 | 150704486 | T | C | 0.00947 | CTSS | - | TRUE | AluJo | SINE,Alu |
| chr2 | 217366933 | C | T | 2.15691E-05 | . | FALSE | AluSz6 | SINE,Alu | |
| chr6 | 31379931 | G | A | 0.00093 | . | FALSE | |||
| chr1 | 145324364 | C | G | 0.00157 | NBPF20,NBPF10 | + | FALSE | ||
| chr16 | 19715588 | T | C | 0.00063 | . | FALSE | AluSg | SINE,Alu | |
| chr7 | 75958149 | A | C | 0.00050 | YWHAG | - | FALSE | ||
| chr3 | 197400501 | C | G | 0.00270 | RUBCN | - | FALSE | ||
| chr3 | 196769982 | C | G | 0.00131 | DLG1 | - | FALSE | ||
| chr1 | 16933135 | G | T | 0.00937 | NBPF1 | - | FALSE | L1MC2 | SINE,Alu |
| chr6 | 42856905 | A | G | 4.80826E-12 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 16889624 | T | C | 3.50465E-05 | NBPF1 | - | TRUE | ||
| chr8 | 117858600 | T | A | 0.00015 | RAD21 | - | FALSE | ||
| chr5 | 159492103 | T | G | 0.00332 | TTC1 | + | FALSE | ||
| chr2 | 20648140 | A | C | 6.93182E-06 | RHOB | + | FALSE | ||
| chr2 | 1637648 | T | C | 9.03854E-11 | PXDN | - | FALSE | ||
| chr1 | 36282608 | G | T | 0.00886 | AGO4 | + | FALSE | ||
| chr10 | 99504630 | G | T | 0.00544 | ZFYVE27 | + | FALSE | ||
| chr1 | 148251083 | T | C | 0.00041 | NBPF8,NBPF14,NBPF9 | - | FALSE | L1MC4 | SINE,Alu |
| chr1 | 19542455 | T | C | 0.00506 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr4 | 10442610 | T | C | 0.00174 | ZNF518B | - | FALSE | ||
| chr4 | 4291832 | A | T | 6.49020E-08 | LYAR | - | FALSE | ||
| chr6 | 52860746 | T | G | 0.00011 | . | FALSE | 7SK | SINE,Alu | |
| chr1 | 9161231 | T | C | 5.02708E-05 | . | FALSE | AluSx | SINE,Alu | |
| chr6 | 74346347 | A | G | 4.16931E-07 | SLC17A5 | - | FALSE | ||
| chr19 | 42375586 | A | G | 0.00016 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 100440553 | A | G | 0.00553 | SLC35A3 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 120163007 | G | A | 0.00573 | ZNF697 | - | FALSE | ||
| chr9 | 7798518 | G | C | 0.00423 | TMEM261 | - | FALSE | ||
| chrX | 9686187 | T | C | 0.00420 | TBL1X | + | FALSE | ||
| chr4 | 17629934 | T | C | 0.00178 | . | FALSE | MER90 | SINE,Alu | |
| chr1 | 33149376 | A | G | 0.00284 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr17 | 65334766 | T | C | 4.45484E-05 | PSMD12 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 59142713 | T | C | 0.00246 | MYSM1 | - | FALSE | ||
| chr1 | 162497738 | G | C | 0.00390 | UHMK1 | + | FALSE | ||
| chr1 | 183486859 | G | A | 0.00831 | SMG7 | + | FALSE | ||
| chr2 | 234385276 | T | C | 0.00951 | USP40 | - | FALSE | ||
| chr1 | 10438014 | A | C | 0.00046 | KIF1B | + | FALSE | ||
| chrX | 77084017 | T | C | 0.00179 | MAGT1 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 45976723 | T | C | 5.68535E-05 | MMACHC,PRDX1 | +,- | FALSE |