RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	176792536	G	T	0.00211	LNPK	-	FALSE
chr1	3546269	C	A	0.00260	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr7	63808867	C	A	0.00556	ZNF736	+	FALSE
chr12	120899168	A	G	6.24570E-05	GATC	+	TRUE	AluJr	SINE,Alu
chr3	10302172	G	A	0.00202	TATDN2	+	FALSE
chr1	10517300	T	C	0.00011		.	FALSE	AluJr	SINE,Alu
chr15	72635903	C	T	0.00334	HEXA	-	FALSE
chr6	47501448	T	C	0.00017	CD2AP	+	FALSE
chr4	17804879	T	C	0.00863	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	143915747	G	A	0.00603		.	FALSE
chr5	37291508	T	C	0.00430		.	FALSE	AluSx3	SINE,Alu
chr1	28836872	A	G	0.00019	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr3	49051841	C	A	0.00132	WDR6	+	FALSE
chr1	9330740	G	C	0.00077	H6PD	+	FALSE
chr1	21100753	T	C	0.00624	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr16	10625437	T	C	0.00028	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	44818525	T	C	0.00235	ERI3	-	FALSE
chr1	40147856	T	C	0.00205	HPCAL4	-	TRUE
chr1	120163520	T	C	0.00017	ZNF697	-	FALSE
chr1	6582221	T	C	6.47537E-05	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	179042905	A	G	0.00034	FAM20B	+	TRUE
chr5	151041884	T	A	0.00101	SPARC	-	FALSE
chr1	179832748	G	C	7.50400E-12	TOR1AIP2	-	FALSE	FLAM_C	SINE,Alu
chr1	117532509	C	A	0.00521	PTGFRN	+	FALSE
chr1	16889004	C	T	0.00977	NBPF1	-	FALSE
chr1	118066724	A	T	0.00979	MAN1A2	+	FALSE
chr4	129795660	T	A	0.00454	JADE1	+	FALSE
chr1	185069687	C	T	0.00072	RNF2	+	FALSE
chr1	184675814	G	A	0.00730	EDEM3	-	FALSE
chr7	156763172	A	G	0.00874	NOM1	+	TRUE	AluSx	SINE,Alu
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr2	128951766	A	G	0.00050	UGGT1	+	TRUE	AluSp	SINE,Alu
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chrX	123046290	A	G	0.00524	XIAP	+	TRUE	AluJb	SINE,Alu
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	201842323	T	C	0.00390	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	10519200	T	C	0.00059		.	FALSE	AluSx3	SINE,Alu
chr2	203745105	T	C	0.00644		.	FALSE	AluSx	SINE,Alu
chr1	62627128	A	G	2.94675E-05	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	225683182	C	T	0.00056	ENAH	-	FALSE
chr6	42047553	A	G	0.00359	TAF8	+	TRUE	AluSz6	SINE,Alu
chr3	14986111	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr5	37288767	T	C	0.00928		.	FALSE	FLAM_C	SINE,Alu
chr1	145293012	G	A	0.00250	NBPF20	+	FALSE
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr1	20982216	T	A	0.00065	DDOST	-	FALSE
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	179326296	A	G	0.00171	SOAT1	+	TRUE
chr4	1205680	C	A	0.00247	CTBP1-AS,CTBP1	+,-	FALSE
chr3	196670092	C	G	0.00393	NCBP2-AS2	+	FALSE
chr6	17951005	G	C	0.00381	KIF13A	-	FALSE
chr1	53288897	A	G	0.00439	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	25890189	A	G	0.00072	LDLRAP1	+	FALSE
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chrX	3526613	C	T	0.00930	PRKX	-	FALSE
chr1	26755643	A	G	0.00068	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	22929376	A	G	0.00378	EPHA8	+	FALSE
chr1	26143725	A	T	0.00112	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	31905887	A	C	4.57629E-05	SERINC2	+	FALSE
chr1	19586458	A	G	2.46370E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	10517527	T	C	0.00430		.	FALSE	AluSx1	SINE,Alu
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr19	42376843	A	G	0.00221		.	FALSE	AluSp	SINE,Alu
chr2	10074384	G	A	0.00765	TAF1B	+	FALSE
chr2	109374952	A	G	0.00031	RANBP2	+	FALSE
chr7	144060286	A	G	0.00674	ARHGEF5	+	FALSE
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr3	172350135	A	T	9.93187E-07	NCEH1	-	FALSE
chr1	158065762	C	T	0.00310	KIRREL	+	FALSE
chr12	12796592	A	C	0.00801	CREBL2	+	FALSE
chr2	27001973	C	T	0.00327	SLC35F6	+	FALSE	AluSx	SINE,Alu
chr2	85132773	C	A	5.10736E-05	TMSB10	+	FALSE
chr2	86272758	G	A	0.00023	POLR1A	-	FALSE
chr15	102516512	G	A	0.00041	WASH3P	+	FALSE
chr1	28825337	A	G	0.00099	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr12	56510708	A	G	0.00050	RPL41	+	FALSE
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr4	103809324	A	C	0.00658	CISD2,SLC9B1	+,-	FALSE
chr1	144930940	T	C	0.00181	NBPF20,PDE4DIP	+,-	FALSE
chr6	109001947	A	G	0.00359	FOXO3	+	FALSE	(A)n	SINE,Alu
chr3	15113655	T	C	0.00025	RBSN	-	TRUE	AluSz6	SINE,Alu
chrX	77083982	T	C	0.00086	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	146033815	G	A	0.00307	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr11	82686151	T	C	0.00404	RAB30	-	FALSE
chr1	12677549	T	A	1.84464E-05	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	24296869	G	T	0.00505		.	FALSE	AluSg	SINE,Alu
chr1	204524357	A	G	0.00568	MDM4	+	TRUE	AluY	SINE,Alu
chr1	1252723	T	C	7.44553E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr9	130268408	T	C	0.00416	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr12	98942696	A	G	3.06836E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr4	39550977	T	C	3.35724E-05	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	73480136	T	A	0.00281	CCT7	+	FALSE
chr1	28825760	A	G	0.00802	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr1	110604747	G	A	0.00739	ALX3	-	FALSE
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr7	94060360	T	G	0.00014	COL1A2	+	FALSE
chr21	9909176	C	A	0.00850	TEKT4P2	-	FALSE
chr1	28939803	C	T	1.99823E-11	TAF12	-	FALSE
chr1	145512951	A	G	4.65248E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr16	2553869	A	T	0.00089	TBC1D24	+	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr19	42375624	A	G	0.00049		.	FALSE	AluSx	SINE,Alu
chr1	85787118	G	C	0.00104	DDAH1	-	FALSE
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr16	10625058	T	C	2.66942E-12	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	145512073	A	G	0.00505	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	11783001	A	G	0.00012		.	FALSE	AluSx	SINE,Alu
chr1	28826150	A	G	0.00052	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	47717189	A	G	0.00384	STIL	-	FALSE
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	11181327	C	T	0.00525	MTOR	-	FALSE
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr5	81571876	A	T	0.00013	RPS23	-	FALSE
chr12	133297904	A	G	8.99170E-13	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	19953130	T	A	0.00595	MINOS1,MINOS1-NBL1	+	FALSE
chr6	43582795	A	G	0.00087	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	1717439	T	A	0.00663	GNB1	-	FALSE
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	93617406	A	T	0.00275	TMED5	-	FALSE
chr4	123859284	C	T	0.00034	SPATA5	+	FALSE
chr3	45721891	A	G	0.00356	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	24786	G	A	0.00285	WASH7P	-	FALSE
chr1	95658358	T	C	0.00633	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	120839683	G	A	0.00875	FAM72B	+	FALSE
chr4	110635488	G	T	8.00508E-05	PLA2G12A	-	FALSE
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr4	56282224	A	G	0.00485	TMEM165	+	TRUE	AluJb	SINE,Alu
chr7	17384887	A	G	4.32861E-08	AHR	+	TRUE	AluSc	SINE,Alu
chr15	49419124	T	C	1.84263E-05	COPS2	-	TRUE	MARNA	SINE,Alu
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr19	3467751	C	A	0.00182	NFIC	+	FALSE	(TA)n	SINE,Alu
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr2	201253956	A	G	0.00071	SPATS2L	+	FALSE
chr1	9328213	A	G	0.00404	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	16889566	T	C	0.00305	NBPF1	-	TRUE
chr1	29519595	T	C	0.00208	MECR	-	TRUE	AluJb	SINE,Alu
chr1	89447856	A	G	0.00218	KYAT3,RBMXL1	-	FALSE
chr12	69159400	G	A	0.00173	SLC35E3	+	FALSE	(AT)n	SINE,Alu
chr2	30863651	A	T	0.00366	LCLAT1	+	FALSE
chr2	189877303	G	T	0.00824	COL3A1	+	FALSE
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chr2	37331525	T	C	0.00479		.	FALSE	AluJb	SINE,Alu
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr1	220231982	T	C	0.00328	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	24086807	T	C	0.00352	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	6282295	T	C	0.00060	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr15	83685469	T	C	0.00976	BTBD1	-	FALSE
chr1	10519910	T	C	7.27344E-07		.	FALSE	AluJr	SINE,Alu
chr14	74526154	T	C	0.00030	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr15	102516561	T	C	0.00805	WASH3P	+	FALSE
chr1	31905906	T	A	0.00092	SERINC2	+	FALSE
chr1	36602176	G	T	0.00017	TRAPPC3	-	FALSE
chr1	28825331	A	G	0.00563	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr19	54971229	T	C	0.00202	LENG8	+	FALSE
chr3	10192816	A	G	0.00010	VHL	+	TRUE	AluSx1	SINE,Alu
chr7	79848334	G	T	0.00158	GNAI1	+	FALSE
chr1	11119950	G	A	4.66412E-05	SRM	-	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr3	149459413	C	T	0.00097	COMMD2	-	FALSE
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr1	17298140	C	G	0.00584	CROCC	+	FALSE
chr1	45975740	C	G	0.00096	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	36534830	A	G	0.00470		.	FALSE	AluJo	SINE,Alu
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chrX	16781275	A	G	0.00417		.	FALSE	AluJo	SINE,Alu
chr17	57281034	A	G	0.00111	PRR11	+	TRUE	AluSz	SINE,Alu
chr8	100890423	C	A	0.00113	COX6C	-	FALSE
chr6	150047430	T	C	0.00568	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr2	238005476	C	T	0.00456	COPS8	+	FALSE
chr4	186081819	C	T	3.85218E-06	CFAP97	-	FALSE
chr11	118621699	T	C	0.00108	DDX6	-	FALSE
chr4	103715820	A	C	0.00652	LOC102723704,UBE2D3	+,-	FALSE	(A)n	SINE,Alu
chr1	10490539	G	C	0.00134	APITD1,APITD1-CORT	+	FALSE
chr1	36067817	T	C	0.00016	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr3	197611758	A	G	0.00958		.	FALSE	FLAM_C	SINE,Alu
chr1	44088112	G	T	0.00822	PTPRF	+	FALSE	(T)n	SINE,Alu
chr1	93299394	A	G	0.00655	FAM69A,RPL5	+,-	FALSE
chr3	32997308	A	G	0.00082		.	FALSE	AluY	SINE,Alu
chr2	132049915	A	G	0.00226	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr22	44890573	T	C	1.87764E-05	LDOC1L	-	FALSE
chr15	41590291	A	C	0.00032	OIP5-AS1	+	FALSE
chr1	28608338	A	G	0.00341	SESN2	+	FALSE
chr1	35648840	G	T	0.00543	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr6	53363500	G	T	0.00684	GCLC	-	FALSE
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr7	4809089	A	G	0.00552	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr8	22995145	T	C	3.53807E-06	TNFRSF10D	-	FALSE
chr5	79923843	T	C	0.00229	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	155851620	A	G	0.00066	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	35644503	T	A	0.00551	SFPQ	-	FALSE
chr3	195701388	G	A	0.00274	SDHAP1	-	FALSE
chr1	116243380	G	A	0.00426	CASQ2	-	FALSE
chr19	19793876	A	G	0.00080	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr5	37290416	T	C	0.00162		.	FALSE	AluSz	SINE,Alu
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr2	110373938	T	G	0.00413	SOWAHC	+	FALSE	(GAAT)n	SINE,Alu
chr2	114513901	C	T	0.00655	SLC35F5	-	FALSE
chr5	40832550	C	T	7.98859E-06	RPL37	-	FALSE
chr1	10518052	T	C	0.00831		.	FALSE	AluJr	SINE,Alu
chr1	1309464	C	T	3.88389E-12	AURKAIP1	-	FALSE
chr1	245017462	G	A	0.00255	HNRNPU,SNORA100	-	FALSE
chr1	220231484	T	C	0.00046	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	33148691	A	G	0.00207	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	48787219	A	G	0.00024	PRKAR2A	-	FALSE
chr1	569981	C	A	4.36771E-05		.	FALSE
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr6	42855256	A	G	0.00572	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	156259229	T	C	0.00225	SSR3	-	TRUE	AluSq2	SINE,Alu
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr1	114438951	A	G	0.00012	AP4B1-AS1,AP4B1	+,-	FALSE
chr6	8014786	T	C	0.00086	BLOC1S5-TXNDC5,BLOC1S5,EEF1E1-BLOC1S5	-	TRUE	AluSz	SINE,Alu
chr2	37328013	T	C	0.00364		.	FALSE
chr2	8996701	G	T	0.00063	MBOAT2	-	FALSE	AluSz	SINE,Alu
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chr1	10042987	A	G	0.00199	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	45244419	T	A	0.00027		.	FALSE
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr1	1419678	A	G	0.00558	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	1345006	A	G	0.00123		.	FALSE	AluSg	SINE,Alu
chr15	65442602	T	C	8.94083E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	1419743	A	G	0.00848	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	46075664	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	52375424	T	C	0.00109	RAB3B	-	FALSE
chr2	37327677	T	C	0.00016		.	FALSE
chr5	52388460	A	T	0.00034	ITGA2	+	FALSE
chr2	37334184	T	A	0.00202	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr3	24019976	C	A	0.00485	NR1D2	+	FALSE
chr1	10519932	T	C	0.00547		.	FALSE	AluJr	SINE,Alu
chr12	9098987	T	A	0.00180	M6PR	-	FALSE
chr1	205738843	C	T	0.00072	RAB29	-	FALSE	AluSz6	SINE,Alu
chr1	36068275	T	C	0.00098	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	53679610	G	A	0.00073	CPT2	+	FALSE	AluSz	SINE,Alu
chr2	74442550	A	T	0.00826		.	FALSE
chr1	19585772	G	A	0.00576	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr2	37328082	T	C	0.00530		.	FALSE
chr5	10435491	G	A	0.00606	MARCH6	+	FALSE
chr4	95586727	G	T	0.00996	PDLIM5	+	FALSE
chr1	45244053	A	G	0.00202	RPS8	+	FALSE
chr1	180013235	T	G	0.00319	CEP350	+	FALSE
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr12	125627187	C	T	0.00055	AACS	+	FALSE
chr1	53289852	A	G	0.00894	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr3	33185037	A	C	0.00144	CRTAP	+	FALSE	L2a	SINE,Alu
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr6	42857058	A	G	3.29248E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr12	133298019	A	G	2.77684E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	36067677	T	C	1.65353E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr19	9673005	T	C	0.00017		.	FALSE	AluSx3	SINE,Alu
chr5	41917695	C	T	0.00546	C5orf51	+	FALSE
chr1	19545145	A	T	0.00510	LOC101927895,EMC1	+,-	FALSE
chr1	1595538	T	C	0.00718	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	16890672	G	A	0.00142	NBPF1	-	FALSE
chr4	185309405	A	G	0.00035	IRF2	-	FALSE
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	130807905	G	T	0.00634	FAR2P1	-	FALSE
chr1	1594498	C	T	0.00024	CDK11B,SLC35E2B	-	FALSE
chr1	35648714	A	T	0.00841	SFPQ	-	FALSE
chr1	67874697	T	C	0.00642	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr4	103183510	C	T	0.00718	SLC39A8	-	FALSE
chr2	132481529	C	T	0.00028	C2orf27A	+	FALSE
chr1	46075604	A	G	0.00155	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	197475873	G	A	0.00844	DENND1B	-	FALSE
chr1	19543457	T	C	0.00718	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	107789927	T	C	0.00111	NRCAM	-	FALSE
chr2	8996326	C	T	0.00077	MBOAT2	-	FALSE
chr5	137842895	A	T	0.00038	ETF1	-	FALSE
chr10	88729314	C	T	8.29001E-05	ADIRF	+	FALSE
chr1	89447882	A	G	0.00103	KYAT3,RBMXL1	-	FALSE
chr10	77807027	T	C	0.00089	C10orf11	+	FALSE
chr2	173462230	G	T	0.00100	PDK1	+	FALSE	MIRc	SINE,Alu
chr1	1662754	T	C	0.00107	SLC35E2	-	TRUE	AluY	SINE,Alu
chr5	40832549	C	T	2.26031E-05	RPL37	-	FALSE
chr1	179042697	A	G	0.00092	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr5	108714298	T	C	0.00967	PJA2	-	FALSE
chr1	10042988	A	G	0.00359	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr1	149913731	T	C	0.00198	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	145689566	A	G	2.12475E-08	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr8	144357992	A	G	0.00780	GLI4	+	FALSE
chr1	3730400	T	C	0.00894	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr1	145209366	A	G	0.00499	NBPF20,NOTCH2NL	+	FALSE
chr1	27731933	C	A	1.77427E-09	WASF2	-	FALSE
chr4	153898316	A	G	0.00312	FHDC1	+	TRUE	AluJo	SINE,Alu
chr1	15991645	T	C	0.00361		.	FALSE	AluSp	SINE,Alu
chr1	12071680	A	G	0.00127	MFN2	+	FALSE
chr1	1421186	C	T	0.00834	ATAD3B	+	FALSE
chr11	68524809	T	C	0.00129	CPT1A	-	TRUE
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr15	41590999	A	G	0.00049	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr2	101623611	A	C	0.00826	RPL31	+	FALSE
chr1	22186113	T	G	0.00083	HSPG2	-	FALSE
chr2	85837797	T	C	0.00050	USP39,C2orf68	+,-	FALSE	AluSx	SINE,Alu
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	87379494	A	T	0.00364	SEP15	-	FALSE
chr1	55619569	C	T	0.00477	USP24	-	FALSE
chr3	141667149	T	C	0.00273	TFDP2	-	TRUE	AluSx	SINE,Alu
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr8	146200283	T	C	0.00082	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr9	86584220	G	A	0.00318	HNRNPK	-	FALSE
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr3	160154971	T	C	0.00820	TRIM59	-	FALSE	AluJb	SINE,Alu
chr1	19542310	T	C	9.10228E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr1	27202844	T	C	0.00076		.	FALSE	AluSq2	SINE,Alu
chr7	99006740	G	A	0.00269	BUD31	+	FALSE
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr1	16928737	C	T	0.00448	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr4	17802772	G	T	0.00328	DCAF16	-	FALSE	AluSz	SINE,Alu
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr1	1164179	G	A	0.00983	SDF4	-	FALSE	G-rich	SINE,Alu
chr14	53109677	T	C	5.62031E-05	ERO1A	-	FALSE
chr6	44417136	A	G	0.00274	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr6	160526548	C	A	0.00086	IGF2R	+	FALSE
chr1	6283332	T	C	0.00387	ICMT	-	TRUE	AluSx3	SINE,Alu
chr12	98943214	A	G	4.64520E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	74333231	C	T	0.00073	TET3	+	FALSE
chr4	190883001	C	G	0.00319	FRG1	+	FALSE
chr2	174090630	C	A	0.00025	ZAK,MLK7-AS1	+,-	FALSE
chr19	58375707	A	G	0.00156	ZNF587	+	TRUE	AluSg	SINE,Alu
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr4	3242100	G	A	0.00916	HTT	+	FALSE
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr14	53243394	T	C	0.00957	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	46269545	G	A	0.00378	MAST2	+	FALSE
chr1	142688506	T	C	0.00337		.	FALSE
chr1	25894466	A	C	0.00783	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr16	89623607	A	G	0.00915	SPG7	+	FALSE
chr1	16812082	A	G	0.00545	CROCCP3	-	FALSE
chr1	44088117	G	T	0.00584	PTPRF	+	FALSE	(T)n	SINE,Alu
chr1	33147928	A	G	9.58446E-05	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr3	101405564	G	A	0.00354		.	FALSE
chr1	116234313	A	G	0.00016	VANGL1	+	FALSE
chr2	54014303	A	G	0.00901	GPR75-ASB3,ERLEC1	+,-	FALSE
chr5	139931634	T	G	6.28154E-05	SRA1	-	FALSE
chr1	27202831	T	C	0.00392		.	FALSE	AluSq2	SINE,Alu
chr13	39598616	G	A	2.18804E-06	PROSER1	-	FALSE
chr1	95362514	G	T	7.06346E-05	CNN3	-	FALSE
chr3	47953733	C	A	0.00057	MAP4	-	FALSE
chr7	128142395	A	C	0.00300	METTL2B	+	FALSE
chr1	9162933	C	T	0.00088		.	FALSE
chr6	150045919	T	C	0.00206	NUP43	-	TRUE	AluSq	SINE,Alu
chr19	9672312	T	C	4.30163E-05		.	FALSE	AluJr	SINE,Alu
chr10	24873171	G	T	0.00329	ARHGAP21	-	FALSE
chr12	9464358	A	G	0.00056	LOC642846	+	FALSE
chr1	70833400	C	T	0.00224	HHLA3	+	FALSE	LTR7	SINE,Alu
chr5	70248478	G	A	0.00229	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	236721608	C	T	0.00286	HEATR1	-	FALSE
chr4	56295166	A	G	0.00988	CLOCK	-	FALSE
chr1	28836900	A	G	0.00018	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	20978294	T	A	0.00985	PINK1-AS,DDOST	-	FALSE
chr3	72426059	T	A	0.00417	RYBP	-	FALSE
chr3	101576175	T	C	0.00246	NFKBIZ	+	FALSE
chr2	37328012	T	C	6.47624E-05		.	FALSE
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr7	17384395	A	G	1.20082E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr1	3545185	C	A	0.00347	TPRG1L	+	FALSE
chr5	37290504	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr2	277314	G	A	0.00867	ACP1	+	FALSE
chr5	52388458	A	T	0.00152	ITGA2	+	FALSE
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr2	201774279	T	C	9.55391E-05		.	FALSE	AluSz	SINE,Alu
chr2	38522138	G	T	8.89010E-06	ATL2	-	FALSE
chr2	37230734	C	T	0.00192	HEATR5B	-	FALSE
chr1	16939857	C	T	0.00091	NBPF1	-	FALSE
chr1	168218504	T	C	0.00748		.	FALSE	AluSz	SINE,Alu
chr1	92148839	T	C	0.00259	TGFBR3	-	FALSE
chr3	150261002	C	T	0.00044	SERP1	-	FALSE
chr1	33149373	A	G	0.00239	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	113289701	T	G	0.00994	TTL	+	FALSE
chr1	67874849	T	C	7.36358E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	22400707	C	G	0.00232	CDC42	+	FALSE	AluSc8	SINE,Alu
chr9	7798518	G	C	0.00423	TMEM261	-	FALSE
chr1	92195511	C	T	0.00681	TGFBR3	-	FALSE
chr1	19542455	T	C	0.00506	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144596446	A	G	0.00124	NBPF20	+	TRUE	AluJb	SINE,Alu
chr5	290324	T	A	0.00729	PDCD6	+	FALSE
chr20	4680094	C	T	0.00438	PRNP	+	FALSE
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	114443609	A	G	0.00035	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	68167532	A	C	0.00916	GNG12	-	FALSE
chr1	16889624	T	C	0.00795	NBPF1	-	TRUE
chr1	16890598	T	A	0.00375	NBPF1	-	FALSE
chr1	87328403	A	T	0.00235	SEP15	-	FALSE
chr1	178887208	A	T	0.00239	RALGPS2	+	FALSE
chr1	20976589	C	T	0.00125	PINK1,PINK1-AS	+,-	FALSE
chr5	40832555	A	T	0.00347	RPL37	-	FALSE
chr1	121133392	T	C	0.00651	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	1431165	C	T	0.00392	ATAD3B	+	FALSE
chr3	10192747	A	G	0.00065	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	16918486	C	T	0.00415	NBPF1	-	FALSE
chr1	205687358	T	C	0.00692	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr5	110463616	G	T	0.00264	WDR36	+	FALSE	(T)n	SINE,Alu
chr5	118729619	A	G	0.00586	TNFAIP8	+	FALSE
chr7	66421684	T	G	0.00042	TMEM248	+	FALSE	AluJr	SINE,Alu
chr1	27202812	T	C	0.00388		.	FALSE	AluSq2	SINE,Alu
chr1	24289057	G	C	0.00044	PNRC2	+	FALSE
chr1	87573325	C	T	0.00121	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr14	50792787	A	G	0.00278	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	28835937	A	G	0.00181	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr6	52226984	G	A	0.00127	PAQR8	+	FALSE	(GCTCGG)n	SINE,Alu
chr1	109242607	G	A	0.00652	PRPF38B	+	FALSE
chr1	36067677	T	C	0.00017	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	217688165	C	A	0.00343	GPATCH2	-	FALSE
chr6	42856029	A	G	7.18756E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr5	170837892	C	A	0.00725		.	FALSE
chr1	117078729	A	G	0.00983	CD58	-	FALSE
chr2	217366911	A	G	0.00449		.	FALSE	AluSz6	SINE,Alu
chr1	16890639	C	T	5.60894E-05	NBPF1	-	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr2	99812289	A	G	0.00040	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	35817023	G	C	0.00030	ZMYM4	+	FALSE
chr2	24223256	A	G	0.00711	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr4	165996818	T	C	0.00804		.	FALSE	AluSg4	SINE,Alu
chr1	9328120	A	G	1.75282E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr6	52365328	T	G	0.00983	TRAM2	-	FALSE	(T)n	SINE,Alu
chr10	65382718	G	A	0.00984	REEP3	+	FALSE	AluSc	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr1	36388202	T	G	0.00707	AGO1	+	FALSE	(GCCT)n	SINE,Alu
chr1	120612194	C	G	0.00561	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	145284134	G	C	0.00203	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	161931167	A	G	0.00251	ATF6	+	FALSE
chr1	19934900	G	A	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	94351063	A	T	0.00188	GCLM	-	FALSE
chr4	177249593	T	G	0.00038	SPCS3	+	FALSE	(T)n	SINE,Alu
chr3	172351006	C	G	6.14326E-06	NCEH1	-	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr1	185069561	A	G	0.00675	RNF2	+	FALSE
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr2	3597974	T	C	1.93309E-05	RNASEH1	-	FALSE
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr1	10519982	T	C	6.11297E-05		.	FALSE	AluJr	SINE,Alu
chr6	150046603	T	C	0.00730	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	145273345	T	C	0.00133	NBPF20,NOTCH2NL	+	FALSE
chr1	16912014	A	C	0.00029	NBPF1	-	FALSE
chr12	56345408	T	G	0.00885	DGKA	+	FALSE
chr17	65334767	T	C	3.33546E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	6283264	T	C	0.00127	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr2	71214819	A	T	0.00346	TEX261	-	FALSE
chr12	125512444	A	G	4.63106E-05		.	FALSE	AluY	SINE,Alu
chr1	22109370	G	A	0.00371	USP48	-	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr19	53155625	T	C	0.00074	ZNF83	-	TRUE	AluSg	SINE,Alu
chr1	16889423	G	C	6.92544E-07	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr9	115446747	T	C	0.00648	INIP	-	TRUE	AluJr	SINE,Alu
chr4	1066073	T	A	0.00387	RNF212	-	FALSE	L1MC1	SINE,Alu
chr7	6501819	A	T	0.00037	KDELR2	-	FALSE
chr1	46076467	A	G	0.00475	NASP	+	TRUE	AluSx	SINE,Alu
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr7	300181	G	A	2.39021E-07	FAM20C	+	FALSE
chr1	87811249	T	A	0.00653	LMO4	+	FALSE
chr1	33147947	A	G	0.00345	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	184661942	T	G	0.00343	EDEM3	-	FALSE
chr1	10519946	T	C	0.00033		.	FALSE	AluJr	SINE,Alu
chr17	57279264	A	G	0.00793	PRR11	+	TRUE	AluSq2	SINE,Alu
chr16	89623619	A	G	0.00275	SPG7	+	FALSE
chr6	44222158	T	A	0.00781	SLC35B2	-	FALSE
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr1	27992825	G	A	0.00192	IFI6	-	FALSE
chr1	53290298	A	G	0.00063	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	120163518	C	T	0.00646	ZNF697	-	FALSE
chr1	138156	G	T	0.00048	LOC729737	-	FALSE
chr16	81744038	T	C	6.34278E-05	CMIP	+	FALSE	(CCGC)n	SINE,Alu
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr5	134236311	A	T	0.00025	TXNDC15	+	FALSE	AluSq	SINE,Alu
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr2	39010088	A	G	0.00192		.	FALSE	AluSp	SINE,Alu
chr1	16935130	C	T	0.00019	NBPF1	-	FALSE

RBP	EWSR1
Knock-Method	shRNA
RBP Family	zf-RanBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR532ZPP
Platform	HiSeq
Pubmed ID	32252787

EWSR1 - Target Gene Network