| RBP | PUF60 |
| Knock-Method | shRNA |
| RBP Family | RRM_1 |
| Biosample Name | HepG2 |
| Tissue Type | Liver |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR648BSC |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr1 | 206557430 | C | T | 0.00011 | SRGAP2 | + | FALSE | ||
| chr1 | 46751578 | T | G | 0.00380 | LRRC41 | - | FALSE | ||
| chrX | 3526659 | C | G | 0.00188 | PRKX | - | FALSE | (AC)n | SINE,Alu |
| chr2 | 102484489 | A | C | 0.00281 | MAP4K4 | + | FALSE | ||
| chr2 | 219146868 | T | C | 0.00764 | PNKD,TMBIM1 | +,- | FALSE | ||
| chr1 | 21806710 | T | G | 0.00194 | NBPF3 | + | FALSE | ||
| chr1 | 26801731 | G | T | 0.00325 | HMGN2 | + | FALSE | (T)n | SINE,Alu |
| chr2 | 85776648 | T | C | 0.00765 | GGCX | - | TRUE | AluSz6 | SINE,Alu |
| chr5 | 25415881 | T | C | 0.00911 | . | FALSE | |||
| chr1 | 205686522 | G | T | 0.00427 | NUCKS1 | - | FALSE | ||
| chr1 | 204095687 | C | A | 5.97770E-05 | SOX13 | + | FALSE | ||
| chr4 | 17802955 | T | C | 0.00071 | DCAF16 | - | FALSE | AluSz | SINE,Alu |
| chr1 | 45976220 | A | G | 0.00031 | MMACHC | + | TRUE | ||
| chr19 | 53914411 | A | G | 8.16883E-05 | ZNF765 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 1647871 | T | C | 7.46571E-06 | CDK11B,CDK11A | - | FALSE | ||
| chr3 | 191114266 | T | C | 0.00258 | CCDC50 | + | FALSE | ||
| chr1 | 36642420 | T | C | 0.00358 | MAP7D1 | + | FALSE | ||
| chr4 | 17802890 | T | C | 0.00303 | DCAF16 | - | TRUE | AluSz | SINE,Alu |
| chr16 | 3207362 | A | T | 1.09222E-05 | . | FALSE | |||
| chr1 | 36067886 | T | C | 0.00786 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr4 | 7762356 | G | A | 3.36293E-10 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr1 | 1252510 | T | C | 1.62601E-05 | CPSF3L | - | TRUE | AluSp | SINE,Alu |
| chr1 | 32373831 | T | G | 0.00252 | PTP4A2 | - | FALSE | (T)n | SINE,Alu |
| chr16 | 10624953 | T | C | 0.00056 | EMP2 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 23884661 | G | A | 0.00205 | ID3 | - | FALSE | ||
| chr19 | 58374130 | C | T | 0.00124 | ZNF587 | + | FALSE | ||
| chr2 | 74332840 | G | C | 4.77205E-06 | TET3 | + | FALSE | ||
| chr16 | 10623553 | T | C | 0.00024 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr7 | 152343700 | T | C | 0.00061 | XRCC2 | - | TRUE | AluSx3 | SINE,Alu |
| chr6 | 31321883 | G | A | 0.00000 | . | FALSE | |||
| chr6 | 31322980 | C | T | 0.00091 | . | FALSE | |||
| chr4 | 120979190 | T | C | 0.00970 | . | FALSE | AluSg4 | SINE,Alu | |
| chr1 | 1534826 | C | T | 0.00382 | FNDC10 | - | FALSE | ||
| chr3 | 183900729 | T | C | 0.00074 | AP2M1 | + | FALSE | MIR3 | SINE,Alu |
| chr3 | 30733403 | A | T | 0.00110 | TGFBR2 | + | FALSE | (TA)n | SINE,Alu |
| chr1 | 36068237 | T | C | 0.00150 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 16576836 | A | G | 0.00885 | FBXO42 | - | FALSE | ||
| chr1 | 36522615 | A | G | 0.00658 | . | FALSE | AluSc | SINE,Alu | |
| chr1 | 38327700 | T | C | 0.00510 | INPP5B | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 116943511 | T | C | 0.00236 | ATP1A1,ATP1A1-AS1 | +,- | FALSE | ||
| chr2 | 8823941 | G | A | 0.00053 | ID2 | + | FALSE | ||
| chr1 | 65898873 | G | C | 0.00530 | LEPR,LEPROT | + | FALSE | ||
| chr1 | 179829425 | T | C | 1.55944E-05 | TOR1AIP2 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 10517486 | T | C | 0.00626 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 1252662 | T | C | 0.00235 | CPSF3L | - | TRUE | AluSp | SINE,Alu |
| chr17 | 53239140 | C | T | 0.00954 | STXBP4 | + | FALSE | MIR | SINE,Alu |
| chr17 | 78921108 | G | A | 0.00065 | RPTOR | + | FALSE | ||
| chr5 | 41919747 | C | T | 0.00814 | C5orf51 | + | FALSE | L2c | SINE,Alu |
| chr1 | 120572572 | C | T | 0.00084 | NOTCH2 | - | FALSE | ||
| chr1 | 145284175 | G | C | 0.00481 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 59148136 | T | C | 0.00244 | MYSM1 | - | FALSE | ||
| chr5 | 68738649 | A | T | 0.00716 | . | FALSE | |||
| chr8 | 143352528 | A | C | 0.00312 | TSNARE1 | - | FALSE | ||
| chr1 | 36067858 | G | A | 0.00293 | PSMB2 | - | FALSE | AluSz | SINE,Alu |
| chr1 | 10520588 | T | C | 0.00341 | . | FALSE | AluSc8 | SINE,Alu | |
| chr1 | 19543457 | T | C | 0.00718 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr1 | 224380757 | A | G | 0.00618 | DEGS1 | + | FALSE | AluSx | SINE,Alu |
| chr14 | 23300663 | G | A | 0.00120 | MRPL52 | + | FALSE | MIRb | SINE,Alu |
| chr3 | 179117266 | T | C | 0.00111 | GNB4 | - | TRUE | AluSz | SINE,Alu |
| chr3 | 17202334 | A | C | 0.00770 | TBC1D5 | - | FALSE | ||
| chr5 | 49692633 | T | G | 0.00808 | EMB | - | FALSE | ||
| chr12 | 69158881 | A | G | 0.00219 | SLC35E3 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 179044181 | A | G | 0.00790 | FAM20B | + | TRUE | AluSx | SINE,Alu |
| chr2 | 191745643 | A | C | 0.00011 | GLS | + | FALSE | (GCA)n | SINE,Alu |
| chr22 | 18572729 | A | G | 0.00228 | PEX26 | + | TRUE | AluYf1 | SINE,Alu |
| chr14 | 103372465 | C | A | 0.00600 | TRAF3 | + | FALSE | (AC)n | SINE,Alu |
| chr11 | 74551853 | A | C | 0.00079 | RNF169 | + | FALSE | ||
| chr3 | 196729939 | C | T | 0.00862 | MELTF,MFI2-AS1 | +,- | FALSE | G-rich | SINE,Alu |
| chr2 | 176792536 | G | T | 0.00211 | LNPK | - | FALSE | ||
| chr1 | 10517992 | T | C | 0.00417 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 16893691 | C | A | 0.00371 | NBPF1 | - | FALSE | ||
| chr1 | 2115914 | G | T | 0.00970 | PRKCZ,FAAP20 | +,- | FALSE | ||
| chr6 | 42856156 | A | G | 0.00190 | RPL7L1 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 2161135 | A | G | 0.00028 | SKI | + | FALSE | ||
| chr1 | 35658211 | G | T | 1.28982E-07 | SFPQ | - | FALSE | ||
| chr1 | 197073932 | T | C | 0.00032 | ASPM | - | FALSE | ||
| chr1 | 145281613 | C | A | 0.00979 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr12 | 56215103 | A | T | 0.00353 | DNAJC14 | - | FALSE | ||
| chr3 | 160213317 | T | A | 0.00208 | KPNA4 | - | FALSE | ||
| chr1 | 36068370 | T | C | 0.00067 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr5 | 79279310 | T | A | 0.00173 | MTX3 | - | FALSE | ||
| chr17 | 60522252 | G | A | 0.00187 | METTL2A | + | FALSE | ||
| chr4 | 39550549 | T | C | 0.00014 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr1 | 33148736 | A | G | 4.97736E-05 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr1 | 21793735 | C | G | 0.00099 | NBPF3 | + | FALSE | ||
| chr8 | 133859871 | T | A | 0.00027 | PHF20L1 | + | FALSE | ||
| chr1 | 10517623 | T | C | 0.00348 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 36068369 | T | C | 0.00012 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 6259025 | C | T | 0.00700 | RPL22 | - | FALSE | ||
| chr1 | 33148740 | A | G | 0.00210 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr2 | 25962253 | A | T | 0.00784 | ASXL2 | - | FALSE | ||
| chr1 | 93827995 | C | T | 0.00714 | DR1 | + | FALSE | ||
| chr7 | 128607384 | G | A | 0.00925 | TNPO3 | - | FALSE | ||
| chr1 | 44088547 | C | A | 0.00927 | PTPRF | + | FALSE | A-rich | SINE,Alu |
| chr1 | 12071680 | A | G | 5.54475E-07 | MFN2 | + | FALSE | ||
| chr1 | 144931392 | G | A | 0.00172 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr9 | 131872862 | C | G | 0.00131 | CRAT | - | FALSE | ||
| chr6 | 74493432 | A | C | 0.00611 | CD109 | + | FALSE | ||
| chr3 | 39452123 | G | A | 0.00093 | RPSA | + | FALSE | ||
| chr1 | 36770065 | C | T | 0.00131 | THRAP3 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 36529419 | A | G | 0.00842 | . | FALSE | AluJr | SINE,Alu | |
| chr3 | 93780109 | G | C | 8.09346E-05 | DHFR2 | - | FALSE | ||
| chr1 | 156565049 | A | C | 0.00169 | GPATCH4 | - | FALSE | ||
| chr1 | 1650797 | A | G | 0.00276 | CDK11B,CDK11A | - | FALSE | ||
| chr5 | 72801321 | T | A | 0.00212 | BTF3 | + | FALSE | ||
| chr1 | 24798068 | C | A | 0.00686 | NIPAL3 | + | FALSE | AluJr | SINE,Alu |
| chr7 | 131241052 | A | G | 0.00663 | PODXL | - | FALSE | (GGCGAC)n | SINE,Alu |
| chr1 | 10517672 | T | C | 0.00070 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 204525667 | A | G | 3.94227E-05 | MDM4 | + | TRUE | AluSz | SINE,Alu |
| chr10 | 11912065 | C | G | 0.00191 | PROSER2-AS1,PROSER2 | +,- | FALSE | ||
| chr16 | 10623576 | T | C | 0.00013 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 85786957 | T | G | 0.00959 | DDAH1 | - | FALSE | ||
| chr1 | 40537944 | C | A | 2.58277E-05 | CAP1 | + | FALSE | ||
| chr6 | 150047376 | T | C | 0.00102 | NUP43 | - | TRUE | AluSc | SINE,Alu |
| chr3 | 14985983 | A | T | 6.81677E-14 | FGD5-AS1 | - | FALSE | ||
| chr5 | 74063154 | C | G | 0.00255 | GFM2,NSA2 | +,- | FALSE | ||
| chr2 | 50147867 | T | A | 0.00896 | NRXN1 | - | FALSE | (GT)n | SINE,Alu |
| chr4 | 119555142 | A | G | 4.95460E-05 | LOC729218 | + | FALSE | ||
| chr1 | 201488170 | A | G | 0.00997 | . | FALSE | AluSz | SINE,Alu | |
| chr3 | 5257975 | A | T | 9.78592E-05 | EDEM1 | + | FALSE | ||
| chr8 | 95805071 | A | G | 1.12730E-06 | DPY19L4 | + | TRUE | AluYf1 | SINE,Alu |
| chrM | 5265 | C | A | 0.00026 | . | FALSE | |||
| chr12 | 124146094 | A | G | 2.86040E-06 | GTF2H3 | + | TRUE | AluSx4 | SINE,Alu |
| chr1 | 229730452 | G | A | 0.00236 | TAF5L | - | FALSE | ||
| chr1 | 33148691 | A | G | 0.00032 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr1 | 179852074 | T | C | 0.00033 | TOR1AIP1 | + | FALSE | ||
| chr1 | 45279903 | C | T | 0.00052 | . | FALSE | (TCTT)n | SINE,Alu | |
| chr6 | 114182271 | G | A | 0.00011 | MARCKS | + | FALSE | ||
| chr1 | 93617406 | A | T | 0.00275 | TMED5 | - | FALSE | ||
| chr1 | 23636028 | T | A | 0.00029 | HNRNPR | - | FALSE | ||
| chr1 | 16893822 | C | T | 0.00808 | NBPF1 | - | FALSE | ||
| chr1 | 46075191 | C | A | 0.00457 | NASP | + | FALSE | A-rich | SINE,Alu |
| chr1 | 179326418 | A | G | 0.00626 | SOAT1 | + | TRUE | AluSg | SINE,Alu |
| chr9 | 68413593 | C | A | 0.00342 | . | FALSE | |||
| chr1 | 10520331 | C | T | 2.36721E-05 | . | FALSE | AluSx1 | SINE,Alu | |
| chr3 | 44791343 | T | C | 0.00220 | KIAA1143 | - | FALSE | AluJr | SINE,Alu |
| chr12 | 64842974 | C | A | 0.00925 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 1345051 | A | G | 0.00362 | . | FALSE | AluSg | SINE,Alu | |
| chr2 | 61277443 | A | G | 0.00362 | PEX13 | + | TRUE | AluSx | SINE,Alu |
| chr4 | 7762313 | C | G | 5.86540E-10 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr5 | 151041886 | T | G | 0.00176 | SPARC | - | FALSE | ||
| chr1 | 67518534 | C | T | 0.00682 | SLC35D1 | - | FALSE | ||
| chr3 | 155658362 | C | T | 0.00807 | . | FALSE | MIR3 | SINE,Alu | |
| chr1 | 6282255 | T | C | 0.00954 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr3 | 99517466 | G | A | 0.00088 | MIR548G | - | FALSE | (TG)n | SINE,Alu |
| chr1 | 91990450 | A | T | 0.00091 | CDC7 | + | FALSE | LFSINE_Vert | SINE,Alu |
| chr16 | 66765441 | G | T | 4.44089E-16 | DYNC1LI2 | - | FALSE | L2c | SINE,Alu |
| chr3 | 186505900 | T | G | 1.87786E-07 | EIF4A2 | + | FALSE | ||
| chr1 | 16958047 | C | T | 0.00193 | . | FALSE | |||
| chr4 | 2940486 | T | C | 7.87098E-05 | NOP14-AS1,NOP14 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 15993013 | G | A | 1.16652E-10 | . | FALSE | |||
| chr1 | 120162635 | A | T | 0.00203 | ZNF697 | - | FALSE | ||
| chr3 | 195243023 | A | C | 0.00729 | PPP1R2 | - | FALSE | ||
| chr2 | 73460310 | G | C | 0.00091 | PRADC1 | - | FALSE | (CGGCGC)n | SINE,Alu |
| chr1 | 184663581 | T | C | 0.00265 | EDEM3 | - | FALSE | ||
| chr1 | 155030557 | A | C | 0.00883 | LOC100505666,ADAM15 | +,- | FALSE | ||
| chr1 | 45975345 | A | G | 0.00357 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr1 | 157963369 | C | G | 0.00667 | KIRREL | + | FALSE | ||
| chr1 | 151095753 | A | G | 0.00256 | GABPB2 | + | TRUE | AluSz | SINE,Alu |
| chr17 | 65334886 | T | C | 8.05380E-09 | PSMD12 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 156256064 | C | T | 0.00619 | SMG5,TMEM79 | +,- | FALSE | ||
| chr1 | 220232144 | T | C | 1.06602E-07 | RNU5F-1,BPNT1 | +,- | FALSE | AluSz | SINE,Alu |
| chr4 | 5710647 | A | G | 5.78692E-06 | EVC2 | - | FALSE | ||
| chr1 | 9161550 | G | A | 0.00043 | . | FALSE | |||
| chr1 | 1419130 | A | G | 0.00107 | ATAD3B | + | FALSE | AluSz | SINE,Alu |
| chr1 | 149581854 | C | A | 0.00175 | LINC00623,LINC00869,LOC103091866 | + | FALSE | L2b | SINE,Alu |
| chr1 | 1469787 | C | T | 0.00010 | ATAD3A | + | FALSE | ||
| chr1 | 145688682 | A | C | 0.00468 | NBPF20,NBPF10,RNF115 | + | FALSE | ||
| chr3 | 37366459 | C | A | 2.94197E-05 | GOLGA4 | + | FALSE | ||
| chr2 | 120021785 | T | C | 0.00751 | STEAP3 | + | FALSE | ||
| chr2 | 176791181 | T | C | 0.00063 | LNPK | - | TRUE | MSTD | SINE,Alu |
| chr1 | 179326295 | A | G | 0.00035 | SOAT1 | + | TRUE | ||
| chr15 | 90819619 | A | G | 5.14004E-06 | . | FALSE | AluSx | SINE,Alu | |
| chr4 | 54244053 | G | C | 0.00726 | FIP1L1 | + | FALSE | (CGGAG)n | SINE,Alu |
| chr11 | 69480680 | T | C | 0.00252 | ORAOV1 | - | FALSE | AluSx1 | SINE,Alu |
| chr2 | 86249930 | T | C | 6.06022E-05 | LOC90784 | - | TRUE | AluJr | SINE,Alu |
| chr12 | 56215102 | T | A | 0.00405 | DNAJC14 | - | FALSE | ||
| chr2 | 70677439 | A | G | 0.00498 | TGFA | - | FALSE | ||
| chr17 | 41133089 | C | T | 0.00179 | RUNDC1 | + | FALSE | ||
| chr1 | 146740502 | C | G | 0.00692 | CHD1L | + | FALSE | ||
| chr17 | 74555106 | T | C | 0.00164 | SNHG16 | + | FALSE | ||
| chr2 | 175711942 | C | T | 8.43847E-05 | CHN1 | - | FALSE | ||
| chr7 | 131241049 | G | A | 0.00145 | PODXL | - | FALSE | (GGCGAC)n | SINE,Alu |
| chr1 | 121134169 | A | T | 0.00660 | SRGAP2-AS1,SRGAP2B,SRGAP2C | +,- | FALSE | (TTTCCT)n | SINE,Alu |
| chr6 | 97592897 | A | C | 0.00144 | MMS22L | - | FALSE | ||
| chr2 | 32535836 | A | G | 0.00163 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 86817074 | G | T | 9.65311E-06 | ODF2L | - | FALSE | L1PA7 | SINE,Alu |
| chr16 | 89630630 | C | T | 0.00296 | RPL13 | + | FALSE | ||
| chr2 | 64069566 | A | G | 0.00075 | UGP2 | + | FALSE | ||
| chr11 | 6478619 | G | A | 0.00656 | TRIM3 | - | FALSE | ||
| chr3 | 50686350 | T | G | 2.12445E-05 | MAPKAPK3 | + | FALSE | ||
| chr2 | 174086940 | C | A | 0.00047 | ZAK,MLK7-AS1 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 1595388 | A | G | 0.00135 | CDK11B,SLC35E2B | - | FALSE | AluJr | SINE,Alu |
| chr1 | 148251079 | T | C | 0.00880 | NBPF8,NBPF14,NBPF9 | - | FALSE | L1MC4 | SINE,Alu |
| chr1 | 176132119 | G | C | 0.00134 | RFWD2 | - | FALSE | L3b | SINE,Alu |
| chr1 | 10521238 | T | C | 0.00173 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr1 | 200375837 | T | G | 0.00490 | ZNF281 | - | FALSE | (T)n | SINE,Alu |
| chr1 | 62164735 | C | T | 0.00016 | TM2D1 | - | FALSE | AluJb | SINE,Alu |
| chr2 | 37330611 | T | C | 0.00835 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 160966352 | T | C | 1.19601E-07 | F11R | - | TRUE | AluSg | SINE,Alu |
| chr4 | 178256913 | C | G | 4.41796E-05 | NEIL3 | + | FALSE | ||
| chr1 | 46075777 | A | G | 0.00268 | NASP | + | TRUE | AluSx4 | SINE,Alu |
| chr1 | 156613632 | G | A | 0.00187 | BCAN | + | FALSE | ||
| chr10 | 71993094 | T | G | 0.00078 | PPA1 | - | FALSE | ||
| chr2 | 196600548 | G | T | 0.00036 | SLC39A10 | + | FALSE | ||
| chr7 | 44841237 | T | A | 0.00599 | PPIA | + | FALSE | ||
| chr2 | 172178588 | T | C | 0.00369 | METTL8 | - | TRUE | AluSx3 | SINE,Alu |
| chr2 | 85132772 | G | C | 5.10736E-05 | TMSB10 | + | FALSE | ||
| chr12 | 125512540 | A | G | 7.43833E-09 | . | FALSE | |||
| chr15 | 74319733 | A | G | 0.00524 | PML | + | TRUE | AluJr | SINE,Alu |
| chr5 | 151041876 | G | T | 5.29152E-05 | SPARC | - | FALSE | ||
| chr6 | 52860422 | G | C | 0.00024 | . | FALSE | 7SK | SINE,Alu | |
| chr1 | 205737659 | C | T | 0.00024 | RAB29 | - | FALSE | AluSq2 | SINE,Alu |
| chr1 | 9161142 | T | C | 8.95302E-05 | . | FALSE | AluSx | SINE,Alu | |
| chr3 | 194789330 | G | T | 0.00699 | XXYLT1 | - | FALSE | AluJr | SINE,Alu |
| chr1 | 145689271 | A | G | 0.00250 | NBPF20,NBPF10 | + | FALSE | ||
| chr5 | 56177872 | A | G | 0.00618 | MAP3K1 | + | TRUE | (CAA)n | SINE,Alu |
| chr1 | 32661578 | C | T | 0.00623 | TXLNA | + | FALSE | (T)n | SINE,Alu |
| chr2 | 29135468 | C | G | 0.00262 | WDR43 | + | FALSE | ||
| chr5 | 79276281 | A | G | 0.00026 | MTX3 | - | FALSE | ||
| chr1 | 45975358 | A | G | 0.00020 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr20 | 25428588 | A | G | 0.00068 | GINS1 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 156564754 | A | G | 0.00562 | GPATCH4 | - | FALSE | ||
| chr1 | 179829401 | T | C | 0.00118 | TOR1AIP2 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 53291408 | A | G | 0.00931 | ZYG11B | + | TRUE | AluJr | SINE,Alu |
| chr1 | 53716416 | G | A | 0.00967 | LRP8 | - | FALSE | ||
| chr1 | 16889639 | T | C | 0.00350 | NBPF1 | - | TRUE | ||
| chr1 | 161931167 | A | G | 0.00251 | ATF6 | + | FALSE | ||
| chr14 | 105270483 | G | T | 7.92193E-06 | ZBTB42 | + | FALSE | ||
| chr1 | 19543352 | T | C | 0.00279 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr12 | 27848051 | C | A | 0.00245 | PPFIBP1 | + | FALSE | ||
| chr1 | 1152309 | A | T | 0.00035 | SDF4 | - | FALSE | ||
| chr6 | 150046603 | T | C | 0.00730 | NUP43 | - | TRUE | AluSq2 | SINE,Alu |
| chr2 | 206987738 | T | C | 0.00859 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 16893686 | G | C | 0.00171 | NBPF1 | - | FALSE | ||
| chr9 | 124094999 | G | T | 0.00764 | GSN | + | FALSE | (TG)n | SINE,Alu |
| chr4 | 39549693 | T | C | 0.00170 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSp | SINE,Alu |
| chr1 | 16935130 | C | T | 0.00155 | NBPF1 | - | FALSE | ||
| chr1 | 10042987 | A | G | 0.00149 | NMNAT1 | + | TRUE | AluSc | SINE,Alu |
| chr16 | 75479484 | T | C | 1.12347E-07 | TMEM170A | - | TRUE | AluJb | SINE,Alu |
| chr1 | 24286327 | G | A | 0.00053 | PNRC2 | + | FALSE | ||
| chr1 | 113672640 | A | G | 0.00629 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 211918115 | C | T | 7.42155E-06 | LPGAT1 | - | FALSE | MER63D | SINE,Alu |
| chr16 | 81744038 | T | C | 6.34278E-05 | CMIP | + | FALSE | (CCGC)n | SINE,Alu |
| chr20 | 29631557 | A | G | 0.00159 | FRG1BP | + | FALSE | ||
| chr1 | 8931947 | T | C | 0.00059 | ENO1 | - | FALSE | ||
| chr1 | 33148698 | A | G | 0.00736 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr12 | 133298339 | A | G | 1.45756E-07 | PGAM5 | + | TRUE | AluSp | SINE,Alu |
| chr6 | 90344605 | T | C | 0.00013 | LYRM2 | - | TRUE | AluSz6 | SINE,Alu |
| chr2 | 10580506 | A | T | 0.00294 | ODC1 | - | FALSE | ||
| chr2 | 136541072 | T | C | 0.00496 | UBXN4 | + | FALSE | ||
| chr1 | 36067677 | T | C | 1.65353E-05 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr3 | 183861243 | A | G | 0.00049 | EIF2B5 | + | FALSE | ||
| chr3 | 197611291 | A | G | 0.00095 | . | FALSE | AluSx1 | SINE,Alu | |
| chr4 | 22404391 | G | A | 0.00338 | ADGRA3 | - | FALSE | ||
| chr4 | 129795661 | A | T | 0.00165 | JADE1 | + | FALSE | ||
| chr7 | 29961939 | G | T | 1.47033E-05 | SCRN1 | - | FALSE | ||
| chr1 | 16889413 | T | C | 8.21040E-06 | NBPF1 | - | TRUE | L1MC4 | SINE,Alu |
| chr1 | 59121768 | G | C | 0.00196 | MYSM1 | - | FALSE | ||
| chr1 | 26673076 | G | A | 0.00465 | AIM1L | - | FALSE | ||
| chr1 | 19585493 | A | G | 3.52757E-05 | MRTO4 | + | TRUE | AluSc8 | SINE,Alu |
| chr19 | 9672346 | T | C | 0.00222 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 46075604 | A | G | 0.00155 | NASP | + | TRUE | AluSx4 | SINE,Alu |
| chr1 | 10044367 | A | G | 5.42058E-05 | NMNAT1 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 206566948 | G | A | 0.00228 | SRGAP2 | + | FALSE | ||
| chr5 | 130538076 | A | G | 0.00045 | LYRM7 | + | TRUE | AluSp | SINE,Alu |
| chr12 | 54526562 | A | T | 0.00119 | LOC400043 | + | FALSE | L2a | SINE,Alu |
| chr17 | 4929000 | A | G | 0.00214 | KIF1C | + | TRUE | AluY | SINE,Alu |
| chr4 | 2940098 | T | C | 0.00034 | NOP14-AS1,NOP14 | +,- | FALSE | AluSp | SINE,Alu |
| chr3 | 122447574 | A | C | 0.00224 | PARP14 | + | FALSE | ||
| chr8 | 10689212 | C | T | 3.39921E-05 | PINX1 | - | FALSE |