RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	27992799	T	A	0.00017	IFI6	-	FALSE	FAM	SINE,Alu
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr1	145511988	A	G	0.00965	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	144828795	C	G	0.00887	NBPF20,NBPF9	+	FALSE
chr1	93297590	C	A	0.00325		.	FALSE
chr16	1727060	G	A	0.00922	CRAMP1	+	FALSE
chr1	10518821	T	C	0.00277		.	FALSE	AluSx1	SINE,Alu
chr14	93712365	A	G	0.00210	BTBD7	-	FALSE
chr1	10517352	T	C	0.00050		.	FALSE	AluJr	SINE,Alu
chr19	19745479	C	T	0.00175	GMIP	-	FALSE
chr1	109856085	G	A	0.00684	SORT1	-	FALSE
chr14	68117864	A	T	0.00744	ARG2	+	FALSE
chr1	92946618	A	G	0.00062	GFI1	-	FALSE
chr1	2282776	G	C	0.00011	MORN1,LOC100129534	-	FALSE
chr5	175811094	C	T	0.00700	NOP16	-	FALSE
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr1	46075715	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr16	15198598	C	T	0.00494	PDXDC1,PKD1P6-NPIPP1,LOC100505915	+,-	FALSE
chr1	19542455	T	C	0.00506	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr16	81064611	A	G	0.00075	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	114306374	G	A	5.13313E-06	RSBN1	-	FALSE
chr2	37328034	T	C	0.00380		.	FALSE
chr1	16912014	A	C	0.00704	NBPF1	-	FALSE
chr3	33138549	G	A	0.00612	GLB1	-	FALSE
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr1	33149400	A	G	0.00258	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr1	55060362	G	A	0.00246	ACOT11	+	FALSE
chr3	10976876	A	G	0.00343	SLC6A11	+	FALSE
chr7	65618876	A	G	0.00817	CRCP	+	TRUE	AluSx3	SINE,Alu
chr6	134492482	A	C	0.00108	SGK1	-	FALSE
chr2	55459824	C	T	0.00763	RPS27A	+	FALSE
chr2	54887287	C	T	7.50624E-05	SPTBN1	+	FALSE
chrX	77083845	T	C	0.00102	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr3	5026729	C	T	0.00539	BHLHE40	+	FALSE
chr6	31110789	T	C	0.00798		.	FALSE
chr3	56703746	A	C	0.00017	FAM208A	-	FALSE
chr1	19585772	G	A	2.66054E-05	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr1	160990878	C	T	9.31086E-06	F11R	-	FALSE
chr1	116609833	G	A	0.00773	SLC22A15	+	FALSE
chr1	16893691	C	A	0.00764	NBPF1	-	FALSE
chr1	46076481	A	G	0.00144	NASP	+	TRUE	AluSx	SINE,Alu
chr8	61693942	G	A	0.00350	CHD7	+	FALSE
chr2	206981832	T	C	0.00251		.	FALSE	AluJb	SINE,Alu
chr1	150704633	T	C	0.00080	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	19585917	T	A	0.00308	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	16910172	G	A	0.00958	NBPF1	-	FALSE
chr9	125609941	G	A	0.00043		.	FALSE
chr1	66100980	A	T	0.00033	LEPR	+	FALSE
chr1	45976723	T	C	0.00340	MMACHC,PRDX1	+,-	FALSE
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr1	3545192	C	G	0.00332	TPRG1L	+	FALSE
chr2	9629954	T	C	0.00802	ADAM17	-	FALSE
chr20	25428724	A	G	0.00789	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	1594196	T	C	0.00097	CDK11B,SLC35E2B	-	FALSE
chr5	149829071	T	C	0.00360	RPS14	-	FALSE
chr1	10517485	T	C	0.00040		.	FALSE	AluSx1	SINE,Alu
chr2	73460299	G	C	0.00180	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr3	10193358	A	G	0.00317	VHL	+	TRUE	L1ME4a	SINE,Alu
chr2	113287424	T	A	0.00361	TTL	+	FALSE
chr1	86817074	G	T	9.65311E-06	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr12	125512494	A	G	0.00427		.	FALSE	AluY	SINE,Alu
chr5	115428334	G	T	0.00265	COMMD10	+	FALSE
chr1	24935337	A	G	0.00773	NCMAP	+	TRUE	AluJb	SINE,Alu
chr2	62095534	T	C	0.00021	CCT4	-	FALSE
chr3	38566722	T	C	0.00426	EXOG	+	FALSE	MIRb	SINE,Alu
chr2	202029999	T	G	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr2	37331627	T	C	0.00030		.	FALSE	AluJb	SINE,Alu
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr1	115313028	T	A	0.00448	SIKE1	-	FALSE	AluSx1	SINE,Alu
chr17	57279284	A	G	0.00149	PRR11	+	TRUE	AluSq2	SINE,Alu
chr12	98943033	A	G	0.00346	TMPO	+	TRUE	AluSz	SINE,Alu
chr10	24873171	G	T	0.00329	ARHGAP21	-	FALSE
chr1	45244411	C	A	0.00149	RPS8	+	FALSE
chr12	120898554	A	G	0.00124	GATC	+	TRUE	AluY	SINE,Alu
chr4	17629933	A	G	0.00504		.	FALSE	MER90	SINE,Alu
chr2	20449605	C	T	0.00871	PUM2	-	FALSE
chr1	42693597	A	G	0.00106	FOXJ3	-	FALSE
chr1	46075663	A	G	0.00061	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	164473	T	C	0.00152		.	FALSE	AluSq2	SINE,Alu
chr7	102006488	A	T	0.00168	LOC100289561,LOC100630923	+	FALSE
chr2	198368112	G	A	0.00127	HSPE1,HSPE1-MOB4	+	FALSE
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr1	226259212	C	A	0.00167	H3F3AP4,H3F3A	+	FALSE
chr12	98943192	A	G	0.00011	TMPO	+	FALSE	AluSz	SINE,Alu
chr19	53914448	A	G	0.00583	ZNF765	+	TRUE	AluSx	SINE,Alu
chr5	175816759	T	A	0.00018		.	FALSE
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr2	242512138	A	G	7.67847E-06	BOK	+	FALSE
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr3	44791320	T	C	0.00059	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	15114395	T	C	0.00333	RBSN	-	TRUE	AluY	SINE,Alu
chr2	99812465	A	G	2.16984E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	156692054	A	T	0.00471	ISG20L2	-	FALSE	AluY	SINE,Alu
chr14	74526155	T	C	0.00054	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr17	5289028	G	A	0.00849	RABEP1,NUP88	+,-	FALSE
chr1	28930023	G	A	5.17411E-07	TAF12	-	FALSE
chr2	85546474	T	C	0.00051	TGOLN2	-	TRUE	AluSc	SINE,Alu
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	6314171	G	A	0.00855	GPR153	-	FALSE
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr7	64441632	A	T	0.00038	ZNF117	-	FALSE
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	173869111	C	G	0.00221		.	FALSE
chr1	1677253	T	C	0.00145	SLC35E2	-	FALSE
chr1	33149495	A	G	0.00652	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	35886030	T	C	0.00606	ZMYM4	+	FALSE
chr6	24720271	T	G	0.00839		.	FALSE
chr3	160969268	C	T	0.00835	NMD3	+	FALSE
chr1	204525649	A	G	0.00191	MDM4	+	TRUE	AluSz	SINE,Alu
chr4	169299528	T	C	0.00745	DDX60L	-	FALSE
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr1	45975358	A	G	0.00020	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	145513017	A	G	0.00142	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	213069783	A	G	0.00600	FLVCR1	+	FALSE
chr8	30536143	T	C	0.00883	GSR	-	TRUE	AluJr	SINE,Alu
chr3	99516962	C	A	2.05391E-14	MIR548G	-	FALSE
chr2	37331125	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr14	21928999	T	C	2.57107E-05	RAB2B	-	TRUE	AluSp	SINE,Alu
chr12	9098987	T	A	0.00180	M6PR	-	FALSE
chr2	206987229	T	C	0.00743		.	FALSE	AluSx	SINE,Alu
chr4	248996	A	G	0.00123	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr5	79277952	A	C	0.00041	MTX3	-	FALSE	(AC)n	SINE,Alu
chr1	931935	T	C	0.00913		.	FALSE
chr1	27202812	T	C	0.00356		.	FALSE	AluSq2	SINE,Alu
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr2	29023121	G	T	0.00077	PPP1CB	+	FALSE
chr1	115313051	T	C	0.00853	SIKE1	-	FALSE
chr17	8286136	T	A	0.00706	RPL26	-	FALSE
chr3	195776630	T	A	7.10429E-08	TFRC	-	FALSE
chr2	65496187	G	A	0.00266	ACTR2	+	FALSE
chr1	155230131	C	T	0.00829	SCAMP3	-	FALSE
chr17	61502459	T	A	0.00161	TANC2	+	FALSE
chr15	90820104	A	G	4.84304E-05		.	FALSE	AluY	SINE,Alu
chr3	5260057	A	T	0.00117	EDEM1	+	FALSE
chr1	32681795	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr1	1572530	A	C	0.00425	CDK11B	-	FALSE
chr10	75009781	T	C	9.15447E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	36752811	C	T	0.00000	THRAP3	+	FALSE
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE
chr6	160526905	C	A	0.00268	IGF2R	+	FALSE
chr10	99504630	G	T	0.00544	ZFYVE27	+	FALSE
chr3	15094061	G	A	0.00188	MRPS25	-	FALSE
chr1	3697486	C	G	0.00110	LRRC47	-	FALSE	AluSc	SINE,Alu
chr1	31405694	G	A	0.00986	PUM1	-	FALSE
chr1	207942427	A	G	0.00822	CD46	+	TRUE	AluSg4	SINE,Alu
chr2	11053740	C	T	0.00402	KCNF1	+	FALSE
chr4	39550558	T	C	0.00441	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr1	46075715	A	G	0.00058	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	16927369	C	T	0.00943	NBPF1	-	FALSE
chr1	6314822	T	C	0.00300	GPR153	-	FALSE
chr1	1234095	C	A	0.00039	ACAP3	-	FALSE
chr3	14526649	T	G	0.00260	SLC6A6	+	FALSE
chr16	75479377	T	C	0.00639	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	220231946	T	C	0.00705	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr4	68483804	A	T	0.00720	UBA6	-	FALSE
chr1	67874270	G	A	0.00019	SERBP1	-	FALSE
chr2	3592638	T	C	0.00941	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr5	37290492	T	C	8.25709E-07		.	FALSE	AluSz	SINE,Alu
chr14	90509587	G	T	0.00203	TDP1	+	FALSE
chr1	68167935	A	G	0.00390	GNG12	-	FALSE
chr1	110912873	T	C	0.00116	SLC16A4	-	FALSE
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr1	109818159	G	T	0.00036	CELSR2	+	FALSE
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr17	38512480	C	T	0.00725	RARA	+	FALSE
chr1	150548881	G	A	9.52924E-05	MCL1	-	FALSE
chr1	6282420	T	C	0.00133	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	128143945	A	G	0.00607		.	FALSE	AluSq2	SINE,Alu
chr1	145513112	A	G	0.00080	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr1	36067925	T	C	2.33961E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr1	180897569	C	T	0.00960	KIAA1614	+	FALSE
chr1	10517527	T	C	0.00430		.	FALSE	AluSx1	SINE,Alu
chr1	16933740	T	A	0.00286	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	54691922	T	A	0.00219	SSBP3	-	FALSE
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr1	11783105	A	G	4.69824E-05		.	FALSE	AluSx	SINE,Alu
chr12	56510710	A	C	0.00050	RPL41	+	FALSE
chr1	47133835	C	A	1.43471E-05	ATPAF1	-	FALSE
chr4	53463566	C	T	5.12751E-05	USP46	-	FALSE
chr2	55462744	C	A	0.00033	RPS27A	+	FALSE
chr1	45975358	A	G	0.00089	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr12	109887765	T	G	0.00091	KCTD10	-	FALSE
chr1	142804471	C	G	0.00555		.	FALSE	MIRb	SINE,Alu
chr3	44791512	T	C	1.32337E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	20025662	T	G	0.00028	RAB5A,PP2D1	+,-	FALSE
chr6	114182271	G	A	0.00011	MARCKS	+	FALSE
chr1	157043632	C	T	0.00085		.	FALSE
chr2	86249961	T	C	0.00262	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	113511341	A	G	0.00283		.	FALSE	AluY	SINE,Alu
chrX	77083982	T	C	0.00086	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	145689566	A	G	0.00918	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	114438951	A	G	0.00012	AP4B1-AS1,AP4B1	+,-	FALSE
chr1	33149375	A	G	0.00840	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr17	78921108	G	A	0.00065	RPTOR	+	FALSE
chr10	112596282	C	T	0.00885	RBM20	+	FALSE
chr1	327441	A	G	1.08612E-09		.	FALSE
chr3	105271344	A	G	0.00460	ALCAM	+	FALSE
chr4	17802819	T	C	0.00112	DCAF16	-	TRUE	AluSz	SINE,Alu
chr6	42856029	A	G	7.18756E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr1	1650807	T	C	0.00096	CDK11B,CDK11A	-	FALSE
chr1	45244053	A	G	0.00562	RPS8	+	FALSE
chr5	40832557	G	T	5.89786E-05	RPL37	-	FALSE
chr1	145511929	A	G	0.00028	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	113672616	A	G	0.00940		.	FALSE	AluJb	SINE,Alu
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr1	25894468	C	G	0.00357	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	16576291	A	G	0.00842	FBXO42	-	FALSE	A-rich	SINE,Alu
chr11	18552273	C	T	0.00243		.	FALSE
chr1	205739266	C	T	0.00125	RAB29	-	FALSE
chr2	47387306	G	T	0.00026	CALM2	-	FALSE
chr1	53708528	T	C	0.00057	LRP8	-	FALSE	(TA)n	SINE,Alu
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chrX	119572534	C	A	0.00387	LAMP2	-	FALSE
chr1	179310439	C	T	0.00907	SOAT1	+	FALSE
chr1	27190857	C	T	0.00160	SFN	+	FALSE
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr8	11700231	T	C	1.53992E-05	CTSB	-	TRUE	AluSq2	SINE,Alu
chr1	10519982	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	43309548	G	A	0.00764	ERMAP	+	FALSE
chr19	53571306	T	C	0.00481	ZNF160	-	FALSE
chr1	145512141	A	G	0.00215	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	21545089	C	T	0.00010	ECE1	-	FALSE	AluSx1	SINE,Alu
chr8	140475147	C	T	0.00719		.	FALSE
chr1	24862649	A	G	0.00299	RCAN3	+	FALSE
chr20	35467713	G	A	0.00373	SOGA1	-	FALSE
chr3	10193797	A	G	0.00261	VHL	+	TRUE	AluSx	SINE,Alu
chr3	196079293	T	C	0.00308		.	FALSE	AluSx	SINE,Alu
chr12	133298349	A	G	0.00000	PGAM5	+	TRUE	AluSp	SINE,Alu
chr17	42876791	T	C	0.00461	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr2	128063523	G	C	0.00174	MAP3K2	-	FALSE
chrX	77083723	T	C	0.00163	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr4	38945689	C	T	1.01800E-05	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr7	100957852	T	C	1.09184E-06	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr4	39551140	T	C	1.44695E-08	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	45722396	A	G	0.00231	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr2	37327670	T	C	0.00297		.	FALSE
chr1	28261657	C	T	0.00327	SMPDL3B	+	FALSE
chrX	2824343	T	C	0.00108	ARSD	-	TRUE	AluJb	SINE,Alu
chr1	85733095	G	A	0.00651	BCL10	-	FALSE
chr1	182809019	G	A	0.00274	DHX9	+	FALSE
chr1	16576290	G	A	0.00104	FBXO42	-	FALSE	A-rich	SINE,Alu
chr1	66838733	A	C	0.00086	PDE4B	+	FALSE
chr19	9673275	T	C	0.00081		.	FALSE	Tigger1	SINE,Alu
chr8	95804490	A	G	0.00219	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr1	225683182	C	T	0.00056	ENAH	-	FALSE
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr4	39550564	T	C	0.00996	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr3	101579158	A	G	0.00022	NFKBIZ	+	FALSE	AluJo	SINE,Alu
chr1	26755643	A	G	0.00428	LIN28A	+	FALSE	AluSc	SINE,Alu
chr19	2426238	T	G	0.00129	TIMM13,TMPRSS9	+,-	FALSE
chr1	1252309	A	T	0.00403	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr3	196670094	G	C	0.00017	NCBP2-AS2	+	FALSE
chr1	26755536	A	G	0.00515	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	40214313	A	G	0.00330	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	110170896	T	C	5.12229E-06	AMPD2	+	FALSE
chr1	16932144	A	C	0.00559	NBPF1	-	FALSE
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr1	145688943	A	G	0.00492	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr4	2931174	T	C	0.00211	ADD1	+	FALSE
chr7	30544360	G	A	0.00170	GGCT	-	FALSE
chr8	25272446	A	T	0.00405	DOCK5	+	FALSE
chr19	39669600	A	G	0.00619	PAK4	+	FALSE	(TG)n	SINE,Alu
chr1	144606963	G	T	0.00337	NBPF20	+	FALSE
chr1	16929327	C	T	5.08143E-05	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	8045340	C	A	0.00242	PARK7	+	FALSE
chr1	6583109	T	C	6.65543E-05	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	81539382	C	T	1.63276E-05	GBE1	-	FALSE
chr1	2125114	C	T	8.70493E-12	FAAP20	-	FALSE
chr2	54858511	C	T	0.00124	SPTBN1	+	FALSE
chr20	18468512	T	C	0.00072	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	91486838	G	C	0.00370	ZNF644	-	FALSE
chr1	27434251	G	A	0.00504	SLC9A1	-	FALSE
chr1	26603883	G	A	0.00660	CEP85	+	FALSE
chr1	900505	G	C	0.00388	KLHL17	+	FALSE
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr1	78414308	T	C	0.00024	FUBP1	-	FALSE
chr17	45761109	T	G	0.00018		.	FALSE
chr15	65442678	T	C	2.30704E-07	CLPX	-	TRUE	AluSg4	SINE,Alu
chr7	79848333	T	G	0.00322	GNAI1	+	FALSE
chr8	145159706	C	G	0.00561	MAF1	+	FALSE
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr1	27212513	T	C	0.00260	GPN2	-	FALSE
chr1	19585545	G	A	0.00696	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr4	113152490	G	A	0.00221		.	FALSE
chr1	207221096	G	A	0.00452	YOD1	-	FALSE
chr4	2516791	T	G	4.75740E-05	RNF4	+	FALSE
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr2	234438139	A	G	0.00220	USP40	-	FALSE
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr1	109818161	C	T	6.45247E-05	CELSR2	+	FALSE
chr1	59142713	T	C	0.00246	MYSM1	-	FALSE
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr1	3546137	A	C	0.00778	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr1	28662254	A	G	0.00505	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	3609064	G	A	0.00194	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr2	37331275	T	C	0.00884		.	FALSE	AluSx1	SINE,Alu
chr1	223945582	G	T	0.00304	CAPN2	+	FALSE	AluSx	SINE,Alu
chr2	206983093	T	C	0.00118		.	FALSE	AluJb	SINE,Alu
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr1	15896984	A	G	0.00297	DNAJC16	+	FALSE	FLAM_C	SINE,Alu
chr3	52288945	T	C	3.51556E-07	WDR82	-	FALSE
chr6	42855957	A	G	0.00107	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr12	10761846	A	G	0.00224	MAGOHB	-	FALSE
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr1	89299658	G	A	0.00779	PKN2	+	FALSE
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr1	36024788	C	T	2.88658E-15	NCDN	+	FALSE
chr2	217366901	A	G	0.00143		.	FALSE	AluSz6	SINE,Alu
chr1	20826790	T	C	0.00208	MUL1	-	FALSE
chr1	179852074	T	C	0.00309	TOR1AIP1	+	FALSE
chr1	52383255	T	C	0.00708	RAB3B	-	FALSE	AluJr	SINE,Alu
chr1	10520532	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr3	14986111	T	C	0.00999	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	117532372	G	T	0.00678	PTGFRN	+	FALSE
chr1	24798520	A	C	0.00110	NIPAL3	+	FALSE
chr6	32121594	T	C	0.00104		.	FALSE
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr8	56985609	G	T	0.00134	RPS20	-	FALSE
chr3	172365720	C	T	3.67728E-06	NCEH1	-	FALSE
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	156692049	A	T	6.25184E-05	ISG20L2	-	FALSE
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr5	37291617	T	C	0.00022		.	FALSE	AluSx3	SINE,Alu
chr1	10518831	T	C	0.00213		.	FALSE	AluSx1	SINE,Alu
chr1	16112795	A	G	1.78234E-05	FBLIM1	+	FALSE
chr1	161160459	T	C	0.00270	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr19	65489	C	A	0.00494	WASH5P	-	FALSE	L2b	SINE,Alu
chr2	206983797	T	C	0.00145		.	FALSE	AluSx	SINE,Alu
chr1	9740894	C	T	0.00097	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr2	100019496	A	G	0.00789	REV1	-	FALSE
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr1	1252349	A	G	0.00798	CPSF3L	-	FALSE	AluJr	SINE,Alu
chr4	25279508	G	A	3.42130E-11	PI4K2B	+	FALSE
chr5	177019196	G	C	0.00509	TMED9	+	FALSE	(GCG)n	SINE,Alu
chr1	148004475	C	G	7.81276E-06	NBPF8	-	FALSE
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr10	89623858	G	C	0.00086	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr1	28662186	A	G	0.00774	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr1	1245100	C	T	0.00656	PUSL1	+	FALSE
chr6	31324643	G	C	5.95617E-06		.	FALSE
chr1	16933629	A	G	0.00299	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr2	88895123	T	C	0.00706	EIF2AK3	-	FALSE
chr1	206579936	A	G	0.00747	SRGAP2	+	FALSE
chr1	205687344	C	T	0.00633	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr2	192555178	C	T	0.00112	LOC105747689	+	FALSE
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr1	95363041	C	T	0.00105	CNN3	-	FALSE
chr1	108113839	T	C	0.00027	VAV3	-	FALSE
chr2	128601556	T	C	3.22117E-06		.	FALSE	AluJr	SINE,Alu
chr1	54871874	C	T	2.61533E-07	SSBP3	-	FALSE
chr1	33148225	A	G	0.00031	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr6	42855979	A	G	8.12389E-06	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	234561498	T	C	2.33971E-05	TARBP1	-	FALSE
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr12	56815652	C	T	1.92663E-05	TIMELESS	-	FALSE
chr3	15113656	T	C	1.73787E-06	RBSN	-	TRUE	AluSz6	SINE,Alu
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr1	1344757	A	G	0.00024		.	FALSE	AluSx1	SINE,Alu
chr2	47137976	T	C	0.00398	MCFD2	-	TRUE	AluJr	SINE,Alu
chr14	103372469	A	C	0.00683	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr4	165998152	T	C	0.00288	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	19670869	A	G	0.00568	CAPZB	-	FALSE
chr3	40503561	A	T	0.00012	RPL14	+	FALSE
chr12	98942644	A	G	0.00133	TMPO	+	TRUE	AluSc	SINE,Alu
chr6	53363497	A	G	0.00106	GCLC	-	FALSE
chr1	28826085	A	G	0.00212	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	196079700	T	C	0.00518		.	FALSE	AluSc	SINE,Alu
chr6	74134804	T	C	0.00386		.	FALSE	AluSz	SINE,Alu
chr1	15990929	C	A	0.00202		.	FALSE	AluSx3	SINE,Alu
chr1	36068364	T	C	0.00195	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	205687213	T	A	0.00950	NUCKS1	-	FALSE
chr1	204520409	A	G	0.00504	MDM4	+	TRUE	AluJb	SINE,Alu
chr4	57194712	A	C	0.00399	KIAA1211	+	FALSE
chr16	48388382	A	G	0.00301	MIR5095	+	TRUE	AluSz	SINE,Alu
chr1	16060892	C	T	0.00946	PLEKHM2	+	FALSE
chr14	24661020	C	T	0.00504	TM9SF1	-	FALSE	AluJb	SINE,Alu
chr1	20826083	G	A	0.00289	MUL1	-	FALSE
chr1	40539203	A	T	0.00179	PPT1	-	FALSE
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr1	173457017	C	T	0.00036	PRDX6	+	FALSE
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr1	12058878	T	C	0.00110	MFN2	+	FALSE
chr1	6283296	T	C	0.00225	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	98518160	T	A	0.00197	DCBLD2	-	FALSE
chr1	179989742	G	C	0.00019	CEP350	+	FALSE
chr1	245017464	T	A	0.00314	HNRNPU,SNORA100	-	FALSE
chr1	16889596	T	C	0.00640	NBPF1	-	TRUE
chr2	198368113	T	A	1.78788E-05	HSPE1,HSPE1-MOB4	+	FALSE
chr1	67874689	T	C	0.00053	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	168220489	A	G	0.00126		.	FALSE	AluSz6	SINE,Alu
chr8	62626962	C	T	0.00823	ASPH	-	FALSE
chr2	155555207	A	C	0.00073	KCNJ3	+	FALSE
chr2	1652354	G	A	0.00114	PXDN	-	FALSE
chr1	19499560	T	C	0.00100	UBR4	-	FALSE
chr1	109479978	G	T	0.00057	CLCC1	-	FALSE
chr2	128620437	T	A	0.00388	AMMECR1L	-	FALSE
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	182569291	A	T	0.00979	RGS16	-	FALSE
chr3	195243023	A	C	0.00729	PPP1R2	-	FALSE
chr1	28825427	A	G	0.00484	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	36386905	G	T	0.00065	AGO1	+	FALSE
chr2	206987634	T	C	0.00281		.	FALSE	AluJb	SINE,Alu
chr4	7761567	C	G	1.89283E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr16	3207362	A	T	1.09222E-05		.	FALSE
chr1	16892938	T	C	0.00569	NBPF1	-	FALSE
chr17	4928967	T	G	0.00921	KIF1C	+	FALSE	AluY	SINE,Alu
chr2	217366626	A	G	0.00057		.	FALSE	AluSz	SINE,Alu
chr1	204521159	A	G	0.00158	MDM4	+	TRUE	AluSp	SINE,Alu
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr3	10192704	A	G	0.00091	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	21795388	A	G	0.00732	NBPF3	+	FALSE
chr7	128143797	A	G	4.50405E-06		.	FALSE	AluSq2	SINE,Alu
chr6	96054540	G	T	0.00358	MANEA	+	FALSE
chr1	44171143	C	A	0.00118	KDM4A-AS1,KDM4A	+,-	FALSE
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr1	47716046	A	T	0.00696	STIL	-	FALSE
chr7	137561076	A	G	0.00488	CREB3L2	-	FALSE
chr1	100657416	C	T	0.00102	DBT	-	FALSE	AluJb	SINE,Alu
chr1	16576295	G	A	0.00231	FBXO42	-	FALSE	A-rich	SINE,Alu
chr5	205565	G	A	0.00593	CCDC127	-	FALSE
chr1	3545198	T	C	0.00013	TPRG1L	+	FALSE
chr1	51434560	G	A	6.87938E-05	CDKN2C	+	FALSE
chr4	39550978	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chrX	3523048	A	T	0.00055	PRKX	-	FALSE
chr3	17199207	T	A	0.00075	TBC1D5	-	FALSE	A-rich	SINE,Alu
chr3	15113655	T	C	6.08503E-07	RBSN	-	TRUE	AluSz6	SINE,Alu
chr4	17488286	T	G	0.00027	QDPR	-	FALSE
chr7	100031511	C	T	0.00490	MEPCE	+	FALSE
chr1	100489992	A	G	0.00297	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr2	171850175	G	T	0.00054	TLK1	-	FALSE
chr6	17951005	G	C	0.00381	KIF13A	-	FALSE
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr1	173457945	G	A	0.00287	PRDX6	+	FALSE
chr1	65898263	A	G	0.00767	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr3	12942852	C	A	0.00458	IQSEC1	-	FALSE
chr6	42094498	T	C	0.00931	C6orf132	-	TRUE	AluSq2	SINE,Alu
chr1	10596341	C	T	0.00552	PEX14	+	FALSE
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr1	145513114	A	G	0.00026	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	224621934	G	C	0.00245	WDR26	-	FALSE	(GGA)n	SINE,Alu
chr3	88191456	C	A	0.00694	CGGBP1,ZNF654	+,-	FALSE
chr1	6257826	T	C	0.00560	RPL22	-	FALSE
chr1	145513051	A	G	0.00269	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	55462747	T	A	0.00163	RPS27A	+	FALSE
chr1	145323656	A	T	3.43611E-06	NBPF20,NBPF10	+	FALSE
chr5	81571669	C	T	0.00143	RPS23	-	FALSE
chr6	52365328	T	G	0.00983	TRAM2	-	FALSE	(T)n	SINE,Alu
chr2	272203	C	T	1.58440E-08	ACP1	+	FALSE
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr5	177658896	A	C	0.00642	PHYKPL	-	FALSE
chr15	66791657	G	T	0.00422	RPL4	-	FALSE
chr12	51325280	A	G	0.00370	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr2	37328008	T	C	1.98312E-07		.	FALSE
chr1	31405707	G	T	0.00431	PUM1	-	FALSE
chr1	207943188	A	G	0.00263	CD46	+	TRUE	AluSx1	SINE,Alu
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr9	96438974	C	G	0.00303	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr1	245006499	C	G	0.00238	COX20	+	FALSE

RBP	G3BP2
Knock-Method	shRNA
RBP Family	NTF2
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR945UYL
Platform	HiSeq
Pubmed ID	32252787

G3BP2 - Target Gene Network