Dataset Overview
RBP
SLBP
Knock-Method
shRNA
RBP Family
SLBP_RNA_bind
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR519KXM
Platform
HiSeq
Pubmed ID
32252787
SLBP - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of SLBP
Show
10
25
50
100
entries
Search:
Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
15.89
18.89
0.58224
1.54737E-05
0.00010
A1CF
30.66
35.04
0.40053
6.68184E-08
7.25543E-07
A2M
2149.68
2491.76
0.47377
1.82551E-09
2.64950E-08
AACS
15.28
17.11
0.30669
0.00019
0.00091
AAED1
6.5
4.22
-0.36684
0.00077
0.00318
AAGAB
8.9
6.35
-0.38239
0.00048
0.00208
AARS
64.38
40.38
-0.51663
2.14370E-09
3.06744E-08
AARS2
4.86
6.13
0.43379
4.25273E-06
3.14321E-05
AASDH
5.26
4.02
-0.20215
0.04876
0.10429
AASS
8.55
11.1
0.52010
5.06768E-09
6.80142E-08
Showing 1 to 10 of 6,190 entries
Previous
1
2
3
4
5
…
619
Next
Function Analysis of Target Genes of SLBP
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCC6
16314129_16314245_16313678_16313804_16315505_16315688
0.00490
-0.051
DataSet_01_326
View details
ABLIM1
116213137_116213242_116211382_116211430_116225456_116225586
0.00077
0.041
DataSet_01_326
View details
ABLIM3
148622053_148622101_148619321_148619451_148624443_148624578
0.00012
-0.146
DataSet_01_326
View details
ACAD11
132297798_132297900_132297676_132297725_132298335_132298402
0.00003
0.448
DataSet_01_326
View details
ACOT9
23752448_23752484_23751288_23751334_23754035_23754133
0.00000
-0.366
DataSet_01_326
View details
ACOT9
23752457_23752484_23751288_23751334_23754035_23754133
0.00000
-0.302
DataSet_01_326
View details
ADD1
2928368_2928402_2927740_2927839_2929897_2931789
0.00149
0.061
DataSet_01_326
View details
ADD1
2928365_2928402_2927740_2927839_2929897_2931054
0.00503
0.049
DataSet_01_326
View details
AHSA2
61413114_61413216_61412636_61412753_61413580_61413632
0.00259
0.158
DataSet_01_326
View details
AKAP9
91671359_91671500_91669987_91670212_91671981_91672085
0.00623
-0.209
DataSet_01_326
View details
Showing 1 to 10 of 234 entries
Previous
1
2
3
4
5
…
24
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCC6P1
18585641_18585757_18586082_18586208_18584198_18584382
0.00257
-0.15
DataSet_01_326
View details
ABI2
204244930_204245107_204255768_204255866_204231599_204231767
0.00002
0.296
DataSet_01_326
View details
ACLY
40054001_40054092_40057948_40058066_40049285_40049427
0.00805
0.086
DataSet_01_326
View details
ACTN4
39200896_39200982_39201915_39202001_39200034_39200116
0.00003
-0.129
DataSet_01_326
View details
AFMID
76187050_76187141_76198575_76198684_76183397_76183514
0.00576
-0.07
DataSet_01_326
View details
AHSA2
61408454_61408540_61410681_61410797_61406115_61406306
0.00046
0.037
DataSet_01_326
View details
AHSG
186334975_186335139_186336394_186336426_186334231_186334316
0.00000
0.023
DataSet_01_326
View details
AHSG
186336079_186336280_186336324_186336426_186334975_186335139
0.00018
-0.01
DataSet_01_326
View details
AHSG
186334975_186335139_186336394_186336426_186334231_186334316
0.00131
0.083
DataSet_01_326
View details
AHSG
186334972_186335139_186336394_186336426_186334231_186334316
0.00165
0.133
DataSet_01_326
View details
Showing 1 to 10 of 129 entries
Previous
1
2
3
4
5
…
13
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACP1
271892_272065_271892_271939_272191_272305
0.00090
-0.102
DataSet_01_326
View details
ALB
74275092_74275183_74275092_74275140_74276028_74276126
0.00000
-0.868
DataSet_01_326
View details
C17orf76-AS1
16342640_16343017_16342640_16342728_16343498_16343567
0.00844
0.1
DataSet_01_326
View details
CALD1
134617738_134618828_134617738_134618141_134625842_134625988
0.00911
0.04
DataSet_01_326
View details
CCDC84
118869720_118869876_118869720_118869819_118881473_118881540
0.00777
0.611
DataSet_01_326
View details
CTTN
70253623_70253751_70253623_70253697_70255936_70256066
0.00741
0.147
DataSet_01_326
View details
ENO2
7025817_7025998_7025817_7025893_7026201_7026423
0.00048
-0.046
DataSet_01_326
View details
FGFR4
176514419_176514636_176514419_176514543_176516550_176516694
0.00840
0.228
DataSet_01_326
View details
HEXA
72646031_72647965_72647899_72647965_72645408_72645519
0.00938
-0.091
DataSet_01_326
View details
KANK1
731157_731404_731157_731266_732377_734835
0.00306
0.053
DataSet_01_326
View details
Showing 1 to 10 of 19 entries
Previous
1
2
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACAD11
132297639_132297900_132297639_132297725_132298335_132298402
0.00013
0.205
DataSet_01_326
View details
ACIN1
23533563_23533697_23533563_23533694_23535174_23535217
0.00576
-0.078
DataSet_01_326
View details
ACOT9
23724744_23724974_23724744_23724856_23725993_23726061
0.00000
0.786
DataSet_01_326
View details
AHSG
186338374_186339107_186338883_186339107_186336285_186336426
0.00793
0.026
DataSet_01_326
View details
ATP6V1G2-DDX39B
31508190_31508354_31508190_31508311_31509726_31509925
0.00000
0.487
DataSet_01_326
View details
ATP6V1G2-DDX39B
31508190_31508343_31508190_31508311_31509726_31509925
0.00009
0.192
DataSet_01_326
View details
CAPN12
39224958_39225176_39224958_39225029_39225452_39225510
0.00026
-0.289
DataSet_01_326
View details
DDX39A
14520553_14520793_14520553_14520685_14521027_14521146
0.00016
0.26
DataSet_01_326
View details
DEK
18256603_18256686_18256603_18256671_18258183_18258293
0.00558
-0.026
DataSet_01_326
View details
FANCI
89819925_89820122_89819941_89820122_89817398_89817535
0.00797
0.233
DataSet_01_326
View details
Showing 1 to 10 of 44 entries
Previous
1
2
3
4
5
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACAD11
132297639_132298402_132297639_132297725_132298335_132298402
0.00027
0.19
DataSet_01_326
View details
ACADVL
7123782_7123995_7123782_7123848_7123922_7123995
0.00772
0.059
DataSet_01_326
View details
ACTR1B
98274889_98275466_98274889_98275106_98275341_98275466
0.00002
0.203
DataSet_01_326
View details
ADD1
2910241_2911158_2910241_2910331_2911065_2911158
0.00937
0.567
DataSet_01_326
View details
AHSA2
61412636_61413632_61412636_61412753_61413580_61413632
0.00835
0.123
DataSet_01_326
View details
AKT1
105237081_105238789_105237081_105237184_105238701_105238789
0.00000
0.101
DataSet_01_326
View details
AP1G2
24035024_24035369_24035024_24035101_24035272_24035369
0.00367
0.114
DataSet_01_326
View details
ARPC3
110873914_110874488_110873914_110874009_110874361_110874488
0.00960
-0.01
DataSet_01_326
View details
ATXN2L
28847253_28848558_28847253_28847806_28848048_28848558
0.00724
-0.136
DataSet_01_326
View details
BAX
49464066_49465055_49464066_49464171_49464788_49465055
0.00003
0.178
DataSet_01_326
View details
Showing 1 to 10 of 47 entries
Previous
1
2
3
4
5
Next
Differential Variants in RNA (DVRs)
Show
10
25
50
100
entries
Search:
Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
145509493
A
G
0.00264
NBPF20,NBPF10,RBM8A
+
TRUE
AluJr
SINE,Alu
chr1
10517659
T
C
0.00012
.
FALSE
AluSx1
SINE,Alu
chr1
21810575
T
C
0.00827
NBPF3
+
FALSE
chr1
19585553
A
G
0.00039
MRTO4
+
TRUE
AluSc8
SINE,Alu
chr1
179044110
A
G
0.00885
FAM20B
+
TRUE
AluSx
SINE,Alu
chr1
32833541
T
C
0.00903
BSDC1
-
TRUE
chr1
3731965
G
A
0.00209
CEP104
-
FALSE
chr1
24865333
A
G
0.00087
.
FALSE
FLAM_A
SINE,Alu
chr1
145512073
A
G
0.00056
NBPF20,NBPF10,RBM8A,GNRHR2
+,-
FALSE
AluY
SINE,Alu
chr1
16724270
A
G
0.00914
SZRD1
+
FALSE
Showing 1 to 10 of 453 entries
Previous
1
2
3
4
5
…
46
Next
Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression