RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	44791569	T	C	0.00685	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	113672569	A	G	0.00742		.	FALSE	AluJb	SINE,Alu
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr14	70838264	T	C	0.00059	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr1	27202959	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr2	37331753	T	C	0.00026		.	FALSE	AluJb	SINE,Alu
chr1	145290818	C	G	0.00931	NBPF20	+	FALSE
chr1	31905889	A	G	0.00483	SERINC2	+	FALSE
chr4	2940462	T	C	6.45116E-07	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	145282600	A	C	0.00391	NBPF20,NOTCH2NL	+	FALSE	MER126	SINE,Alu
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	26755209	A	G	0.00745	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	20978457	T	C	0.00036	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr19	42375586	A	G	0.00404		.	FALSE	AluSx	SINE,Alu
chr1	28835937	A	G	0.00025	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr2	10074384	G	A	0.00765	TAF1B	+	FALSE
chr1	36535560	A	G	0.00059		.	FALSE	AluSx1	SINE,Alu
chr17	42225547	A	C	0.00240	C17orf53	+	FALSE
chr1	90048248	C	T	3.54659E-05	LRRC8B	+	FALSE
chr1	110207639	T	A	0.00080	GSTM4	+	FALSE
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr3	14986080	T	C	4.44089E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	39989926	T	C	0.00354	BMP8A,PPIEL	+,-	FALSE
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr5	125961573	A	G	0.00217	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	161559407	A	G	0.00237	FCGR2C	+	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr1	67874689	T	C	0.00146	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr6	42981525	G	C	0.00041	MEA1	-	FALSE
chr1	10521238	T	C	0.00232	DFFA	-	TRUE	AluY	SINE,Alu
chr2	113287424	T	A	0.00616	TTL	+	FALSE
chr1	203821865	C	T	0.00222	ZC3H11A	+	FALSE
chr1	8930561	T	G	0.00913	ENO1	-	FALSE
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr1	76252687	T	C	0.00021	RABGGTB	+	FALSE
chr2	85132779	T	G	1.13350E-06	TMSB10	+	FALSE
chr4	17803545	T	C	0.00710	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	100203693	G	A	0.00142	FRRS1	-	FALSE
chr1	95658346	T	A	0.00961	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	209605640	A	C	0.00581	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	16892275	C	T	0.00230	NBPF1	-	FALSE
chr1	76255228	G	A	0.00073	RABGGTB,SNORD45B	+	FALSE
chr1	1252468	T	C	0.00096	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr3	15114486	T	C	0.00342	RBSN	-	TRUE	AluY	SINE,Alu
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr6	75797290	T	A	0.00147	COL12A1	-	FALSE
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr1	2335871	G	A	0.00298	RER1	+	FALSE
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr3	73431830	A	G	0.00157	PDZRN3	-	FALSE
chr3	14986104	T	C	0.00992	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr2	27466552	G	C	0.00396	CAD	+	FALSE
chr1	36851360	G	A	0.00578	STK40	-	FALSE
chr2	48025764	C	T	0.00722	MSH6	+	FALSE
chr16	747230	C	G	0.00269	FBXL16	-	FALSE
chr3	15113736	T	C	0.00081	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	149818508	T	C	7.96693E-05		.	FALSE	MLT1D	SINE,Alu
chr2	47387305	G	T	0.00322	CALM2	-	FALSE
chr2	98090610	T	C	0.00832	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	203822584	T	C	5.41257E-07	ZC3H11A	+	FALSE
chr1	1650797	A	G	0.00325	CDK11B,CDK11A	-	FALSE
chr3	179117270	T	C	0.00478	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	19543352	T	C	0.00098	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	22109952	G	A	0.00889		.	FALSE
chr1	150937960	G	C	0.00014	CERS2	-	FALSE	G-rich	SINE,Alu
chr5	170837892	C	A	0.00725		.	FALSE
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10519932	T	C	0.00547		.	FALSE	AluJr	SINE,Alu
chr4	155457049	T	A	0.00434	PLRG1	-	FALSE	L2d2	SINE,Alu
chr3	48787094	T	C	0.00518	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	33148789	A	G	0.00568	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr16	8902411	A	G	0.00357	PMM2	+	FALSE
chr1	89479063	G	A	0.00076	GBP3	-	FALSE
chr2	3622912	G	T	0.00000	RPS7	+	FALSE
chr11	19245854	T	C	0.00078	E2F8	-	FALSE
chr1	179326315	A	G	0.00187	SOAT1	+	TRUE
chr1	85785549	T	C	0.00320	DDAH1	-	FALSE
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	53292607	T	A	0.00680	ZYG11B	+	FALSE
chr1	41088377	C	T	2.57179E-08	RIMS3	-	FALSE
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	47562582	G	A	0.00484	LOC101927043	-	FALSE	BC200	SINE,Alu
chr5	134062605	C	T	0.00019	SEC24A	+	FALSE
chr1	180991776	C	A	0.00664	STX6	-	FALSE
chr1	28662199	A	G	0.00138	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	28826223	A	G	0.00990	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	85776508	A	T	0.00747	GGCX	-	FALSE	AluSz6	SINE,Alu
chr1	65898269	C	T	0.00399	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr1	1252309	A	T	0.00403	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr1	160966353	T	C	0.00011	F11R	-	TRUE	AluSg	SINE,Alu
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	77166017	G	A	0.00627		.	FALSE
chr1	38326643	T	C	0.00458	INPP5B	-	TRUE	AluJr	SINE,Alu
chr3	15113847	T	C	0.00026	RBSN	-	TRUE	AluSz6	SINE,Alu
chr6	42855200	A	G	2.13337E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr19	13884096	A	G	1.54361E-06	MRI1	+	TRUE	AluSz	SINE,Alu
chr5	151041873	A	G	0.00136	SPARC	-	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr1	3395039	G	A	0.00027	ARHGEF16	+	FALSE
chr5	122359498	A	C	0.00038	PPIC	-	FALSE	(AC)n	SINE,Alu
chr19	11945632	A	G	2.87422E-05	ZNF440	+	TRUE	AluSp	SINE,Alu
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr6	42045545	A	G	0.00440	TAF8	+	TRUE	AluSz	SINE,Alu
chr1	179326847	A	G	0.00846	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	16973198	G	A	0.00514	MST1P2	+	FALSE
chr4	39549703	T	C	0.00150	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr2	210885022	C	T	0.00325	RPE	+	FALSE
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr1	16893691	C	A	0.00141	NBPF1	-	FALSE
chr1	162497738	G	C	0.00390	UHMK1	+	FALSE
chr1	23636875	T	A	0.00686	HNRNPR	-	FALSE
chr4	95588274	G	A	0.00095	PDLIM5	+	FALSE
chr1	9663444	C	T	0.00140	TMEM201	+	FALSE
chr2	128601583	T	C	0.00550		.	FALSE	AluJr	SINE,Alu
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr3	191111160	A	G	4.43846E-07	CCDC50	+	FALSE
chr1	167973198	A	G	0.00061	DCAF6	+	FALSE
chr1	144912233	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr1	36282608	G	T	0.00886	AGO4	+	FALSE
chr2	110373919	G	A	0.00240	SOWAHC	+	FALSE
chr1	46093407	C	A	0.00700	GPBP1L1	-	FALSE	A-rich	SINE,Alu
chr1	109967951	A	C	0.00095	PSMA5	-	FALSE
chr4	119956116	G	T	0.00442	SYNPO2	+	FALSE
chr1	148004440	C	A	0.00082	NBPF8	-	FALSE
chr1	95363041	C	T	0.00105	CNN3	-	FALSE
chr1	110173775	G	T	0.00038	AMPD2	+	FALSE
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr1	52816691	T	C	0.00353	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr1	26161129	A	C	0.00607	AUNIP	-	FALSE
chr4	17803604	T	C	0.00172	DCAF16	-	TRUE	AluY	SINE,Alu
chr4	1193026	A	G	0.00471	SPON2,LOC100130872	-	FALSE	AluSp	SINE,Alu
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr1	100489835	A	G	0.00043	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr3	196662641	T	C	0.00059	NCBP2	-	FALSE
chr12	104186946	G	T	0.00523	NT5DC3	-	FALSE
chr21	34731077	A	G	0.00926	IFNAR1	+	TRUE	AluJr	SINE,Alu
chr8	6263057	A	C	0.00419	LOC100287015	-	FALSE
chr1	145311900	C	T	0.00286	NBPF20,NBPF10	+	FALSE
chr2	128602913	G	A	0.00230		.	FALSE
chr2	219134117	C	T	0.00357	AAMP	-	FALSE
chr1	35649803	A	C	0.00659	SFPQ	-	FALSE
chr2	113962806	A	G	0.00309		.	FALSE	AluSz	SINE,Alu
chr3	124948045	G	C	0.00784	ZNF148	-	FALSE
chr1	762109	C	T	0.00026	LINC00115	-	FALSE
chr1	28662057	A	G	3.94650E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	3806074	G	A	0.00809	C1orf174	-	FALSE	AluSp	SINE,Alu
chr3	197682718	T	C	0.00163	IQCG,RPL35A	+,-	FALSE
chr1	16889864	C	A	0.00020	NBPF1	-	FALSE
chr6	149912555	G	A	0.00551		.	FALSE
chr5	149013844	T	A	0.00366	ARHGEF37	+	FALSE
chr1	569803	G	A	0.00166		.	FALSE
chr3	179117646	G	A	0.00812	GNB4	-	FALSE
chr1	40213412	A	G	0.00235	PPIE	+	TRUE	AluSx3	SINE,Alu
chr1	114940211	G	T	0.00925	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	6683581	A	C	0.00126	PHF13	+	FALSE
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	36067925	T	C	1.59250E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr6	42855954	A	G	0.00190	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	16892276	T	C	0.00209	NBPF1	-	FALSE
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr1	25570565	G	A	0.00094	RSRP1	-	FALSE	Alu	SINE,Alu
chr3	44790781	T	C	0.00289	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	44818528	T	G	0.00486	ERI3	-	FALSE
chr4	9909923	G	A	0.00416	SLC2A9	-	FALSE
chr9	140729536	C	A	0.00699	EHMT1	+	FALSE
chr2	201774341	T	C	0.00073		.	FALSE	AluSz	SINE,Alu
chr1	28826085	A	G	0.00281	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	10586903	A	C	0.00041	ODC1,SNORA80B	-	FALSE
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr5	25415881	T	C	0.00911		.	FALSE
chr1	10520725	T	C	0.00234	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	39305021	G	T	0.00046	RRAGC	-	FALSE
chr1	23833607	A	T	0.00818	E2F2	-	FALSE
chr4	13606576	A	T	0.00737	BOD1L1	-	FALSE
chr1	10043053	A	G	0.00318	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr19	10431799	G	T	0.00145	RAVER1	-	FALSE
chr15	91044387	T	G	0.00077	IQGAP1	+	FALSE
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	61764916	A	C	0.00189	XPO1	-	FALSE	(AC)n	SINE,Alu
chr2	37328034	T	C	0.00047		.	FALSE
chr4	47514685	C	T	2.65771E-05	ATP10D	+	FALSE
chr1	145368837	C	A	4.93702E-07	NBPF20,NBPF10	+	FALSE
chr1	36392543	G	T	0.00971		.	FALSE	(T)n	SINE,Alu
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr1	6283558	A	T	0.00624	ICMT	-	FALSE
chr7	75958129	T	A	0.00162	YWHAG	-	FALSE
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr1	55619569	C	T	0.00477	USP24	-	FALSE
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	167759573	T	C	0.00895	MPZL1	+	FALSE
chr9	89627063	A	G	0.00614	LOC440173	-	FALSE
chr1	70718269	A	G	0.00234		.	FALSE
chr10	89623865	A	C	0.00348	PTEN	+	FALSE
chr2	37328034	T	C	0.00046		.	FALSE
chr2	198368110	C	A	0.00053	HSPE1,HSPE1-MOB4	+	FALSE
chr1	45975345	A	G	0.00273	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	170607000	T	A	0.00590	PHOSPHO2-KLHL23,KLHL23	+	FALSE
chr1	9163328	T	C	0.00287		.	FALSE	AluSp	SINE,Alu
chr1	20826784	T	C	0.00204	MUL1	-	FALSE
chr3	141667149	T	C	0.00273	TFDP2	-	TRUE	AluSx	SINE,Alu
chr3	10142949	C	T	0.00721	FANCD2,FANCD2OS	+,-	FALSE
chr1	179829595	T	C	0.00115	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr2	102484489	A	C	0.00281	MAP4K4	+	FALSE
chr1	6662500	C	G	0.00235	KLHL21	-	FALSE
chr1	16893721	A	C	0.00043	NBPF1	-	FALSE
chr1	145209366	A	G	0.00019	NBPF20,NOTCH2NL	+	FALSE
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr2	1636938	C	T	0.00072	PXDN	-	FALSE	(T)n	SINE,Alu
chr12	25358943	T	C	0.00310	KRAS	-	FALSE
chr3	45748599	T	A	0.00470	SACM1L	+	FALSE
chr6	53363500	G	T	0.00684	GCLC	-	FALSE
chr1	109240642	A	C	0.00373	PRPF38B	+	FALSE
chr1	93603196	G	A	0.00627	MTF2	+	FALSE
chr7	129251289	C	T	0.00808		.	FALSE
chr2	61416403	T	G	0.00350	USP34	-	FALSE	AluSc8	SINE,Alu
chr1	24296874	G	A	0.00627		.	FALSE	AluSg	SINE,Alu
chr1	9163839	A	G	0.00237		.	FALSE
chr8	30643553	A	G	0.00968	PPP2CB	-	FALSE
chr7	143003525	T	A	0.00064	CASP2	+	FALSE	AluY	SINE,Alu
chr1	155214017	C	A	0.00261	GBA	-	FALSE	AluSx3	SINE,Alu
chr1	28825418	A	G	0.00525	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr6	31379931	G	A	0.00093		.	FALSE
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr1	11901592	T	C	0.00076	CLCN6,NPPA-AS1	+	FALSE
chr1	24288535	A	T	0.00271	PNRC2	+	FALSE
chr1	28836975	A	G	0.00782	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	11782984	A	G	0.00542		.	FALSE	AluSx	SINE,Alu
chr2	114356336	C	T	0.00680	WASH2P	+	FALSE
chr11	94801633	A	T	0.00808	SRSF8	+	FALSE
chr1	19542305	T	C	0.00085	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	149363414	A	G	0.00458	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr3	14986200	G	T	0.00346	FGD5-AS1	-	FALSE	AluSq2	SINE,Alu
chr1	171486912	G	A	0.00866	PRRC2C	+	FALSE
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr2	55255314	A	C	0.00638	RTN4	-	FALSE
chr1	889183	C	T	3.20836E-06	NOC2L	-	FALSE
chr1	89649462	T	C	2.70922E-05	GBP4	-	TRUE	AluJb	SINE,Alu
chr1	19585519	A	G	3.44907E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr4	17629926	C	T	0.00319		.	FALSE	MER90	SINE,Alu
chr2	37331269	T	C	0.00781		.	FALSE	AluSx1	SINE,Alu
chr1	87379493	G	A	0.00353	SEP15	-	FALSE
chr1	145273345	T	C	0.00190	NBPF20,NOTCH2NL	+	FALSE
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr1	144833386	A	G	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr1	151372040	A	T	0.00825		.	FALSE
chr7	137561078	G	A	0.00558	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr1	224380757	A	G	0.00618	DEGS1	+	FALSE	AluSx	SINE,Alu
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr3	178954055	T	C	0.00308	PIK3CA	+	FALSE
chr2	206983093	T	C	0.00118		.	FALSE	AluJb	SINE,Alu
chr1	19953124	G	A	0.00137	MINOS1,MINOS1-NBL1	+	FALSE
chr1	19543457	T	C	0.00718	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	96318078	A	T	0.00790		.	FALSE
chr4	57326159	A	G	0.00019	PAICS	+	TRUE	AluJr	SINE,Alu
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr4	54244053	G	C	0.00726	FIP1L1	+	FALSE	(CGGAG)n	SINE,Alu
chr2	20401859	A	T	0.00023	SDC1	-	FALSE	(A)n	SINE,Alu
chr2	3502625	T	C	0.00800	ADI1	-	FALSE
chr1	59123655	C	T	0.00655	MYSM1	-	FALSE
chr1	200941185	T	G	0.00729	KIF21B	-	FALSE
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr1	31532379	A	G	0.00092	PUM1	-	FALSE
chr1	6283548	A	G	0.00286	ICMT	-	FALSE
chr1	145511993	A	G	0.00088	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	67874849	T	C	7.36358E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	202311040	A	C	0.00588	UBE2T	-	FALSE
chr1	17735266	G	A	0.00471	RCC2	-	FALSE
chr10	98278593	A	T	0.00792	TM9SF3	-	FALSE
chr3	9829171	G	A	0.00730	TADA3	-	FALSE
chr1	148556726	G	T	0.00758		.	FALSE
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr1	145511797	T	G	0.00894	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	(T)n	SINE,Alu
chr16	75479910	T	C	0.00026	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr2	36776053	T	C	0.00029	CRIM1	+	FALSE
chr1	32661578	C	T	0.00694	TXLNA	+	FALSE	(T)n	SINE,Alu
chr3	156258227	T	C	0.00094	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	85548076	A	T	0.00682	TGOLN2	-	FALSE
chr2	37330503	T	C	0.00177		.	FALSE	AluSq2	SINE,Alu
chr1	154438880	T	C	0.00170	IL6R	+	FALSE
chr1	53291395	A	G	0.00017	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	26161107	A	T	0.00022	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr1	145513098	A	G	0.00067	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr7	6063468	G	A	0.00451	EIF2AK1	-	FALSE
chr1	9328243	A	G	0.00616	H6PD	+	TRUE	AluJr	SINE,Alu
chr12	133298349	A	G	0.00000	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr1	8921471	C	T	6.67995E-05	ENO1	-	FALSE
chr1	36770599	G	T	0.00123	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	120611964	G	C	0.00130	NOTCH2	-	FALSE
chr3	183547227	T	C	7.80232E-05	PARL	-	FALSE
chr12	69237509	A	G	1.55617E-05	MDM2	+	TRUE
chr1	32661578	C	T	0.00623	TXLNA	+	FALSE	(T)n	SINE,Alu
chr9	125887703	A	C	0.00067	STRBP	-	FALSE
chr19	45406538	C	G	0.00119	TOMM40	+	FALSE
chr3	47036756	C	G	0.00091	NBEAL2	+	FALSE
chr1	46164678	T	C	0.00773	IPP	-	TRUE	AluJb	SINE,Alu
chr1	179829584	T	C	0.00204	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr5	93018883	A	T	0.00393	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	184661942	T	G	0.00343	EDEM3	-	FALSE
chr1	205683408	C	T	0.00082	NUCKS1	-	FALSE
chr1	229586611	T	C	0.00794	NUP133	-	TRUE	AluSz	SINE,Alu
chr3	14986110	T	C	0.00051	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	85718132	C	A	0.00738	C1orf52	-	FALSE
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr2	74375276	A	C	0.00328	BOLA3-AS1	+	FALSE
chr1	197070442	G	T	0.00468	ASPM	-	FALSE
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr1	115249239	G	A	1.76451E-06	NRAS	-	FALSE
chr1	20977856	T	C	0.00232	PINK1,PINK1-AS	+,-	FALSE
chr1	184663581	T	C	0.00265	EDEM3	-	FALSE
chr1	46827871	G	A	0.00860	NSUN4	+	FALSE
chr20	309186	A	G	0.00665	SOX12	+	FALSE	A-rich	SINE,Alu
chr1	6282315	T	C	0.00508	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	49395691	C	T	0.00037	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr8	95804469	A	G	0.00133	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr1	234542410	C	A	0.00832	TARBP1	-	FALSE
chr1	1650787	T	C	0.00590	CDK11B,CDK11A	-	FALSE
chr1	6314171	G	A	0.00855	GPR153	-	FALSE
chr19	58372320	A	G	0.00510	ZNF587	+	TRUE	AluSz	SINE,Alu
chr1	155829140	C	G	0.00889	GON4L	-	FALSE
chr1	39470978	T	A	0.00378	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr4	22404391	G	A	0.00338	ADGRA3	-	FALSE
chr2	113494520	T	C	0.00267	CKAP2L	-	FALSE	AluSx1	SINE,Alu
chrX	118673382	T	C	0.00021	CXorf56	-	TRUE	AluSz	SINE,Alu
chr1	145369709	A	G	0.00073	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	200375418	C	T	0.00425	ZNF281	-	FALSE
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr1	207219603	T	C	0.00341	YOD1	-	FALSE
chr3	120114128	A	C	6.21214E-12	FSTL1	-	FALSE
chr7	157129834	C	G	1.26796E-05	DNAJB6	+	FALSE
chr2	189877304	A	T	0.00612	COL3A1	+	FALSE
chr2	178406765	T	A	0.00325	AGPS	+	FALSE
chr1	16575726	T	C	0.00916	FBXO42	-	FALSE
chr1	108742130	T	C	1.29742E-06	SLC25A24	-	FALSE
chr1	145688663	T	G	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr1	110300588	C	T	0.00232	EPS8L3	-	FALSE
chr1	77165735	A	G	0.00227		.	FALSE
chr3	183901281	G	A	4.84515E-09	AP2M1	+	FALSE
chr8	22995145	T	C	3.53807E-06	TNFRSF10D	-	FALSE
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	40214148	A	G	0.00426	PPIE	+	TRUE	AluSq2	SINE,Alu
chrX	123046695	A	G	0.00054	XIAP	+	TRUE	AluSz	SINE,Alu
chr2	202901910	G	A	0.00963	FZD7	+	FALSE
chr3	148748257	C	G	0.00989	HLTF	-	FALSE
chr2	174090336	A	C	0.00331	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr4	17629434	A	G	0.00661		.	FALSE	AluSx3	SINE,Alu
chr1	322711	A	G	0.00149		.	FALSE
chr1	28864435	A	G	0.00088	RCC1	+	FALSE
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr3	156259229	T	C	1.62025E-06	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	179327008	A	G	0.00168	SOAT1	+	TRUE
chr1	6682037	G	A	0.00302	PHF13	+	FALSE
chr4	129795659	A	T	0.00459	JADE1	+	FALSE
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE

RBP	HNRNPL
Knock-Method	shRNA
RBP Family	RRM_5
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR155BMF
Platform	HiSeq
Pubmed ID	32252787

HNRNPL - Target Gene Network