RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr7	64435678	T	A	0.00256	ZNF117	-	FALSE
chr7	65619292	A	G	0.00189	CRCP	+	TRUE	AluSz6	SINE,Alu
chr3	73115390	C	T	0.00462	PPP4R2	+	FALSE	(AT)n	SINE,Alu
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr5	147650355	A	C	0.00222	LOC102546294,SPINK13	+,-	FALSE	MLT1D	SINE,Alu
chr15	33064742	C	G	0.00215	FMN1	-	FALSE
chr5	32124827	G	T	0.00047	GOLPH3	-	FALSE
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr1	2115914	G	T	0.00970	PRKCZ,FAAP20	+,-	FALSE
chr2	109401259	C	T	0.00889	RANBP2	+	FALSE
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr3	169808354	G	A	0.00015	PHC3	-	FALSE
chr17	5288078	A	G	0.00081	RABEP1	+	FALSE
chr1	9160900	T	C	0.00542		.	FALSE	AluJb	SINE,Alu
chr1	23408939	T	A	1.04314E-06	KDM1A	+	FALSE
chr1	6282401	T	C	1.82955E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16890428	T	A	0.00233	NBPF1	-	FALSE
chr2	128601583	T	C	0.00550		.	FALSE	AluJr	SINE,Alu
chr1	78483452	C	T	0.00094	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr1	45120664	C	T	0.00437	TMEM53	-	FALSE
chr1	6282301	T	C	0.00290	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	144931392	G	A	0.00286	NBPF20,PDE4DIP	+,-	FALSE
chr2	209180073	C	A	0.00478	PIKFYVE	+	FALSE
chr1	144932151	G	T	0.00294	NBPF20,PDE4DIP	+,-	FALSE
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr5	256514	G	C	0.00198	SDHA	+	FALSE
chr1	40537944	C	A	0.00371	CAP1	+	FALSE
chr1	27204447	T	C	0.00513		.	FALSE	AluSg7	SINE,Alu
chr8	37613073	A	C	0.00394	ERLIN2	+	FALSE	(CCCCCAC)n	SINE,Alu
chr19	11256672	T	C	9.28647E-11	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	151668295	A	C	0.00576	SNX27	+	FALSE
chr3	40578843	A	G	0.00221	ZNF621	+	TRUE	AluJr	SINE,Alu
chr3	45267310	C	T	0.00038	TMEM158	-	FALSE
chr1	158057633	C	G	0.00031	KIRREL	+	FALSE
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	96429362	A	T	0.00907	LIX1	-	FALSE
chr1	120165040	T	C	0.00195	ZNF697	-	FALSE
chr7	77409288	A	G	7.47972E-05		.	FALSE	AluSc	SINE,Alu
chr1	19542679	T	C	0.00584	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr2	234775941	A	G	0.00161	MSL3P1	-	FALSE
chr1	36386884	C	T	0.00590	AGO1	+	FALSE
chr9	137534059	C	A	0.00626	COL5A1	+	FALSE
chr3	49397323	T	C	0.00000	RHOA	-	TRUE
chr1	10519064	T	C	0.00192		.	FALSE	AluSx3	SINE,Alu
chr18	212601	C	A	0.00189	USP14	+	FALSE	AluSz	SINE,Alu
chr12	64842925	A	G	0.00345		.	FALSE	AluSz	SINE,Alu
chr1	234561498	T	C	0.00092	TARBP1	-	FALSE
chr17	65334828	T	C	0.00160	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	19542401	T	C	0.00077	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	246829616	T	C	0.00139	CNST	+	FALSE
chr2	37331929	T	C	0.00518		.	FALSE	L1MC4	SINE,Alu
chr8	145159712	A	G	0.00402	MAF1	+	FALSE
chr1	36388197	C	T	0.00315	AGO1	+	FALSE
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr5	175816758	T	A	0.00528		.	FALSE
chr1	206635246	A	T	0.00283	SRGAP2	+	FALSE	(AC)n	SINE,Alu
chr1	193054574	G	T	0.00511	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr5	40832553	A	T	0.00121	RPL37	-	FALSE
chr2	3592602	T	C	0.00076	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr12	102517753	T	C	0.00022	PARPBP	+	FALSE
chr7	100860467	C	G	0.00267	PLOD3	-	FALSE
chr1	95362514	G	T	0.00658	CNN3	-	FALSE
chr1	89525966	T	C	0.00039	GBP1	-	FALSE
chr8	144940798	T	C	0.00255	EPPK1	-	FALSE
chr2	91805816	G	A	2.75786E-10		.	FALSE
chr1	168220489	A	G	0.00319		.	FALSE	AluSz6	SINE,Alu
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chr1	16890598	T	A	0.00375	NBPF1	-	FALSE
chr3	69038160	G	A	0.00557	EOGT	-	FALSE
chr2	202242616	G	A	0.00880	TRAK2	-	FALSE
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr1	93827764	A	G	0.00098	DR1	+	FALSE
chr19	35741552	C	T	0.00165	LSR	+	FALSE
chr3	148748339	G	T	0.00666	HLTF	-	FALSE
chr3	126755556	C	T	0.00303	PLXNA1	+	FALSE
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr1	228880098	T	A	4.07865E-05	RHOU	+	FALSE
chr1	32799435	A	T	0.00515	MARCKSL1	-	FALSE
chr1	200589813	C	A	1.20032E-05	KIF14	-	FALSE
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr1	179326847	A	G	0.00031	SOAT1	+	TRUE	AluJo	SINE,Alu
chr2	128950548	A	G	0.00589	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	10517276	T	C	0.00039		.	FALSE	AluJr	SINE,Alu
chr1	20978294	T	A	0.00985	PINK1-AS,DDOST	-	FALSE
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	39470979	C	A	0.00160	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	144595935	G	A	0.00061	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	205686523	G	T	0.00640	NUCKS1	-	FALSE
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr13	21547676	T	C	0.00403	LATS2	-	FALSE
chr1	32638906	C	T	4.63739E-10	KPNA6	+	FALSE
chr1	6475348	C	A	4.73725E-05	HES2	-	FALSE	Tigger1	SINE,Alu
chr5	139931628	A	C	0.00804	SRA1	-	FALSE
chr11	16771525	T	C	0.00014	C11orf58	+	FALSE
chr1	33148706	A	G	0.00050	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr6	52269046	C	G	0.00338	PAQR8	+	FALSE
chr1	28835937	A	G	0.00121	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	45226084	G	A	0.00970	KIF2C	+	FALSE
chr13	28240417	C	G	6.17934E-05	POLR1D	+	FALSE
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr2	242212177	C	T	2.31719E-05	HDLBP	-	FALSE
chr3	39449137	T	C	0.00000	RPSA	+	FALSE
chr1	145513090	A	G	0.00017	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	178978532	T	C	0.00061	KCNMB3	-	FALSE
chr1	1344893	A	G	0.00186		.	FALSE	AluSg	SINE,Alu
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	28800380	C	A	0.00709	PHACTR4	+	FALSE
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr2	128064423	C	T	0.00063	MAP3K2	-	FALSE
chr1	175129946	C	T	0.00466	KIAA0040	-	FALSE	(TCT)n	SINE,Alu
chr1	87211940	A	C	0.00164	SH3GLB1	+	FALSE
chr1	201846632	C	T	7.46598E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	202311040	A	C	0.00588	UBE2T	-	FALSE
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr4	26432834	G	A	0.00167	RBPJ	+	FALSE	(A)n	SINE,Alu
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr1	100731820	G	A	0.00771	RTCA	+	FALSE
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr5	14769103	G	A	0.00104	ANKH	-	FALSE
chr1	51873951	G	A	1.40484E-05	EPS15	-	FALSE
chr1	115313051	T	C	0.00853	SIKE1	-	FALSE
chr3	12628920	G	C	0.00036	RAF1	-	FALSE
chr7	22983890	T	C	0.00097	FAM126A	-	FALSE
chr7	128143512	A	G	0.00984		.	FALSE	AluJr4	SINE,Alu
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr1	65900357	G	T	0.00041	LEPR,LEPROT	+	FALSE
chr8	143352528	A	C	0.00312	TSNARE1	-	FALSE
chr1	226333560	A	T	0.00339	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr2	37331753	T	C	0.00026		.	FALSE	AluJb	SINE,Alu
chr4	170678993	T	C	3.15742E-05	HPF1	-	FALSE
chr15	38643574	T	C	0.00455	SPRED1	+	FALSE
chr5	139931622	T	A	0.00881	SRA1	-	FALSE
chr1	154438084	C	T	0.00561	IL6R	+	FALSE
chr1	6585331	T	C	0.00779	NOL9	-	TRUE	FAM	SINE,Alu
chr1	45474230	G	A	0.00012	HECTD3	-	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr1	3371371	C	G	0.00844	ARHGEF16	+	FALSE
chr2	232576431	T	C	0.00593	PTMA	+	FALSE
chr19	45406536	G	T	0.00518	TOMM40	+	FALSE
chr1	16945452	C	T	0.00184	CROCCP2	-	FALSE
chr7	65888510	T	C	0.00519		.	FALSE
chr1	26449336	A	G	0.00343	PDIK1L	+	FALSE
chrM	9988	T	C	0.00011		.	FALSE
chr1	52378211	T	C	0.00195	RAB3B	-	TRUE	FLAM_C	SINE,Alu
chr1	220231254	T	C	0.00376	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr12	1611799	A	G	0.00156	LINC00942	+	FALSE
chr19	23542157	T	C	0.00140	ZNF91	-	TRUE	AluY	SINE,Alu
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	203922075	A	G	0.00058	NBEAL1	+	FALSE
chr1	16932429	C	G	0.00106	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	73923605	T	C	0.00366	COX18	-	TRUE	AluSq2	SINE,Alu
chr2	10586899	G	A	0.00312	ODC1,SNORA80B	-	FALSE
chr17	8378932	A	G	0.00372	MYH10	-	FALSE
chr1	110173775	G	T	0.00015	AMPD2	+	FALSE
chr1	184663581	T	C	0.00265	EDEM3	-	FALSE
chr1	40537947	A	C	0.00295	CAP1	+	FALSE
chr1	110951224	A	G	0.00352	LAMTOR5-AS1	+	TRUE	AluJr	SINE,Alu
chr1	16945227	G	T	0.00090	CROCCP2	-	FALSE
chr1	36068237	T	C	0.00054	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	184675814	G	A	0.00730	EDEM3	-	FALSE
chr1	145285310	C	A	5.09397E-05	NBPF20,NOTCH2NL	+	FALSE
chr17	61502463	T	G	0.00370	TANC2	+	FALSE
chr1	56961756	A	G	0.00682	PLPP3	-	FALSE
chr11	65764470	T	C	0.00435	EIF1AD	-	TRUE	AluSz6	SINE,Alu
chr1	10517485	T	C	0.00260		.	FALSE	AluSx1	SINE,Alu
chr1	27434251	G	A	0.00504	SLC9A1	-	FALSE
chr1	87573348	C	A	0.00879	HS2ST1	+	FALSE
chr12	98943182	A	G	1.41026E-08	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	23833607	A	T	0.00831	E2F2	-	FALSE
chr1	144874815	T	C	0.00701	NBPF20,PDE4DIP	+,-	FALSE
chr3	194349178	C	T	0.00881	TMEM44	-	FALSE
chr4	39550085	T	C	3.55103E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr1	193054154	G	A	0.00757	TROVE2	+	FALSE
chr2	234386018	A	G	0.00299	USP40	-	FALSE
chr1	6283550	A	T	0.00225	ICMT	-	FALSE
chr15	83659311	C	T	0.00858	FAM103A1,C15orf40	+,-	FALSE
chr3	179506482	A	G	0.00017	USP13	+	FALSE	MER33	SINE,Alu
chr19	42375627	A	G	0.00058		.	FALSE	AluSx	SINE,Alu
chr1	16890130	A	C	0.00412	NBPF1	-	FALSE
chr1	151846854	T	G	0.00626	THEM4	-	FALSE	AluSx	SINE,Alu
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr17	65334726	T	C	7.47982E-07	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	45976723	T	C	0.00733	MMACHC,PRDX1	+,-	FALSE
chr2	128064422	C	T	0.00039	MAP3K2	-	FALSE
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr1	29519665	T	C	0.00680	MECR	-	TRUE	AluJb	SINE,Alu
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr1	36527402	A	T	0.00278		.	FALSE
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr3	196466874	G	T	0.00226	PAK2	+	FALSE
chr2	192555801	C	A	0.00628	LOC105747689	+	FALSE
chr17	62541203	G	A	0.00660	SMURF2	-	FALSE
chr12	124146077	A	G	1.08379E-05	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr2	69688917	T	C	0.00254	AAK1	-	TRUE	AluSq2	SINE,Alu
chr9	132268440	A	G	3.40625E-05	LINC00963	+	TRUE	AluJb	SINE,Alu
chr3	14986461	T	C	3.09385E-06	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	16933643	A	G	0.00279	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr3	10192827	A	G	1.26958E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	38423184	C	T	4.70100E-06	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	113213004	G	T	0.00206	CAPZA1	+	FALSE
chr14	103372464	C	A	0.00577	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr3	10192608	A	G	0.00030	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr12	66516911	A	T	0.00067	LLPH	-	FALSE
chr9	108152702	G	A	2.83018E-05	SLC44A1	+	FALSE
chr1	6694980	G	A	0.00240	THAP3,DNAJC11	+,-	FALSE
chr10	75010139	T	C	0.00323	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	207943385	A	G	0.00558	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	10517653	T	C	0.00776		.	FALSE	AluSx1	SINE,Alu
chr16	46614656	T	A	0.00565	SHCBP1	-	FALSE
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr9	116022896	T	C	9.26547E-05	SLC31A1	+	FALSE
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr17	5288082	A	G	0.00184	RABEP1	+	TRUE
chr17	49042242	T	C	0.00054	SPAG9	-	TRUE	AluJb	SINE,Alu
chr5	96366315	T	C	0.00319		.	FALSE	(TC)n	SINE,Alu
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr7	65618786	A	G	3.58027E-08	CRCP	+	TRUE	AluSx3	SINE,Alu
chr2	206983267	T	C	0.00133		.	FALSE	AluJb	SINE,Alu
chr19	49468569	G	T	0.00266	FTL	+	FALSE
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr6	11577085	C	T	1.34362E-05	TMEM170B	+	FALSE
chr15	41591417	A	G	2.88542E-07	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	28662057	A	G	3.94650E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr8	42043493	G	A	0.00045	PLAT	-	FALSE	MLT2C1	SINE,Alu
chr1	44402565	G	A	0.00010	ARTN	+	FALSE
chr1	224621934	G	C	0.00245	WDR26	-	FALSE	(GGA)n	SINE,Alu
chr1	168220363	A	G	0.00488		.	FALSE	AluSz6	SINE,Alu
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr17	61502459	T	A	0.00161	TANC2	+	FALSE
chr1	185069687	C	T	0.00072	RNF2	+	FALSE
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr1	27992824	G	A	0.00025	IFI6	-	FALSE
chr1	6282587	T	C	0.00221	ICMT	-	TRUE
chr10	75009921	T	C	5.40286E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr3	196079390	T	C	2.00948E-06		.	FALSE	AluSx	SINE,Alu
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	170037423	G	T	0.00802	SH3RF1	-	FALSE
chr5	43377330	T	C	0.00039	CCL28	-	TRUE	AluSz	SINE,Alu
chr7	80373463	A	C	0.00399	SEMA3C	-	FALSE
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	1534614	T	C	5.67045E-11	FNDC10	-	FALSE
chr1	11181327	C	T	0.00573	MTOR	-	FALSE
chr17	58156064	G	A	9.79781E-05	HEATR6	-	FALSE
chr17	60522243	C	G	0.00327	METTL2A	+	FALSE
chr11	118880839	A	G	0.00922	CCDC84	+	TRUE	AluJb	SINE,Alu
chr5	40832551	A	T	5.78892E-08	RPL37	-	FALSE
chr6	31324643	G	C	5.95617E-06		.	FALSE
chr19	46053393	T	C	0.00514	OPA3	-	TRUE	AluSx1	SINE,Alu
chr1	9163328	T	C	0.00287		.	FALSE	AluSp	SINE,Alu
chr6	143382538	A	T	0.00145	AIG1	+	FALSE
chr17	29578724	C	T	0.00514	NF1	+	FALSE
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr19	53155674	T	C	1.27993E-05	ZNF83	-	TRUE	AluSg	SINE,Alu
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr4	7764017	T	C	0.00028	AFAP1,AFAP1-AS1	+,-	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	225684742	T	C	0.00518	ENAH	-	FALSE
chr1	32638775	A	T	0.00949	KPNA6	+	FALSE	(A)n	SINE,Alu
chr5	96366326	G	C	0.00120		.	FALSE	(TG)n	SINE,Alu
chr1	204521512	A	G	7.69882E-05	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	89225976	T	C	0.00586	PKN2	+	FALSE
chr3	125248855	C	A	0.00071	OSBPL11	-	FALSE
chr1	1593750	A	G	0.00191	CDK11B,SLC35E2B	-	FALSE
chr1	25169634	A	G	0.00531	CLIC4	+	FALSE
chr3	195963398	A	G	0.00271		.	FALSE
chr2	128950497	A	G	4.96654E-06	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	95392593	C	T	0.00173	CNN3	-	FALSE	(GGCGCG)n	SINE,Alu
chrX	16782947	A	G	0.00225		.	FALSE	AluJb	SINE,Alu
chr1	108113839	T	C	1.78857E-05	VAV3	-	FALSE
chr1	16889217	G	C	0.00795	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	26131654	G	A	0.00149	SEPN1	+	FALSE
chr7	28860031	A	T	0.00017	CREB5	+	FALSE
chr2	174090339	A	C	2.67746E-05	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	8021778	T	C	0.00495	PARK7	+	FALSE
chr17	26672363	G	A	0.00599	TNFAIP1	+	FALSE
chr1	19586458	A	G	1.61978E-09	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	145688973	A	G	0.00283	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	53288870	A	G	0.00122	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	42592902	T	C	0.00934	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	20945264	A	C	0.00605	CDA	+	FALSE
chr1	26608012	C	A	0.00564	SH3BGRL3	+	FALSE
chr1	15736752	G	A	0.00170	EFHD2	+	FALSE
chr3	40353791	A	T	0.00419	EIF1B	+	FALSE
chr1	54692331	T	C	0.00549	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	118068558	G	A	0.00644		.	FALSE
chr3	14986471	T	C	3.70393E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr4	6676407	G	C	0.00178	LOC93622	+	FALSE
chr20	43707842	A	G	0.00100	STK4	+	TRUE	AluJb	SINE,Alu
chr1	20826781	C	T	1.74444E-05	MUL1	-	FALSE
chr19	7085418	A	G	6.02730E-06	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	32096265	A	G	0.00208	PEF1	-	FALSE
chr1	78201745	G	T	0.00140	USP33	-	FALSE
chr1	16254872	C	A	4.87895E-08	SPEN	+	FALSE
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr4	152020781	C	T	0.00925	RPS3A	+	FALSE
chr1	118502087	C	T	0.00585	WDR3,SPAG17	+,-	FALSE
chr2	86249840	T	C	0.00482	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	157094053	G	A	0.00740		.	FALSE	A-rich	SINE,Alu
chr17	57279323	A	G	0.00159	PRR11	+	TRUE	AluSq2	SINE,Alu
chr5	31553951	C	T	0.00240	C5orf22	+	FALSE
chr2	201774185	T	C	0.00932		.	FALSE	AluSz	SINE,Alu
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr2	183642652	G	A	0.00309	DNAJC10	+	FALSE
chr10	79552092	C	T	0.00159	DLG5	-	FALSE
chr1	10043363	A	G	0.00509	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	35886030	T	C	0.00606	ZMYM4	+	FALSE
chr11	82686151	T	C	0.00404	RAB30	-	FALSE
chr7	100957851	T	C	0.00028	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr2	75888160	A	C	0.00599	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr8	143739343	T	C	0.00999	JRK	-	FALSE
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr3	155658362	C	T	0.00807		.	FALSE	MIR3	SINE,Alu
chr1	6283292	T	C	0.00993	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	1686040	G	T	0.00543	NADK	-	FALSE
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr2	106510201	C	A	0.00638	NCK2	+	FALSE
chr9	115447531	T	C	0.00164	INIP	-	TRUE	AluJb	SINE,Alu
chr4	57326917	A	G	5.41162E-06	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	14526648	T	G	9.03719E-05	SLC6A6	+	FALSE
chr2	171850174	T	G	3.41223E-05	TLK1	-	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr4	248783	A	G	0.00901	ZNF876P	+	FALSE	L1MA3	SINE,Alu
chr4	25279508	G	A	3.42130E-11	PI4K2B	+	FALSE
chr4	84215880	T	C	4.10546E-05	HPSE	-	TRUE	AluJr	SINE,Alu
chr1	159946750	G	A	0.00105	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	16910172	G	A	0.00023	NBPF1	-	FALSE
chr1	206579798	T	C	0.00476	SRGAP2	+	FALSE
chr2	191799595	A	G	0.00162	GLS	+	FALSE
chr1	10521130	T	C	0.00807	DFFA	-	TRUE	AluY	SINE,Alu
chr1	148556753	G	A	0.00472		.	FALSE
chr1	148003752	T	C	0.00015	NBPF8	-	TRUE	L1MC4	SINE,Alu

RBP	UPF2
Knock-Method	shRNA
RBP Family	MIF4G
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR318OXM
Platform	HiSeq
Pubmed ID	32252787

UPF2 - Target Gene Network