RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr6	3021492	A	G	0.00613	HTATSF1P2	-	FALSE	Tigger3a	SINE,Alu
chr15	92715131	A	T	0.00306	SLCO3A1	+	FALSE
chr3	48787684	T	C	0.00494	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	87328403	A	T	0.00235	SEP15	-	FALSE
chr2	98090925	T	C	0.00056	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	53716416	G	A	0.00967	LRP8	-	FALSE
chr1	10519912	T	C	5.10285E-06		.	FALSE	AluJr	SINE,Alu
chr1	1571802	G	A	0.00067	CDK11B	-	FALSE
chr6	42856158	A	G	0.00118	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	998582	G	C	0.00073		.	FALSE
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr1	46165437	T	C	0.00090	IPP	-	TRUE	FRAM	SINE,Alu
chr1	160967857	T	C	0.00032	F11R	-	TRUE	AluSp	SINE,Alu
chr1	26608012	C	A	0.00564	SH3BGRL3	+	FALSE
chr3	15113519	C	T	0.00108	RBSN	-	FALSE
chr1	19543349	T	C	0.00090	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr3	40577745	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr12	133635613	T	C	0.00805		.	FALSE
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr1	60340527	G	A	0.00027	HOOK1	+	FALSE
chr1	179077613	T	C	0.00731	ABL2	-	FALSE
chr2	238005476	C	T	0.00456	COPS8	+	FALSE
chr4	190878580	A	G	0.00097	FRG1	+	FALSE
chr6	74134781	T	C	0.00789		.	FALSE	AluSz	SINE,Alu
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr1	155032752	A	G	0.00347	LOC100505666,ADAM15	+,-	FALSE
chr6	134492481	A	C	0.00340	SGK1	-	FALSE
chr1	161930908	G	A	0.00083	ATF6	+	FALSE
chr3	49396751	T	C	0.00000	RHOA	-	FALSE
chr3	86994021	T	C	0.00596	VGLL3	-	FALSE
chr1	31905886	C	A	0.00273	SERINC2	+	FALSE
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr1	145290818	C	G	0.00287	NBPF20	+	FALSE
chr17	7482018	C	A	9.29146E-05	SENP3-EIF4A1,EIF4A1	+	FALSE
chr11	65764470	T	C	0.00435	EIF1AD	-	TRUE	AluSz6	SINE,Alu
chr3	107526033	T	A	0.00056	BBX	+	FALSE
chr1	154989595	T	C	0.00264	ZBTB7B	+	FALSE
chr4	4291832	A	T	6.49020E-08	LYAR	-	FALSE
chr22	18572728	A	G	0.00050	PEX26	+	TRUE	AluYf1	SINE,Alu
chr3	158320703	C	A	0.00841	MLF1	+	FALSE
chr12	98942885	A	G	1.31269E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr19	42375584	A	G	0.00021		.	FALSE	AluSx	SINE,Alu
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	54692341	T	C	0.00045	SSBP3	-	FALSE	(T)n	SINE,Alu
chr2	217366191	T	A	0.00306		.	FALSE
chr2	31491075	A	G	0.00061	EHD3	+	FALSE
chr5	131715011	A	G	0.00761	SLC22A5	+	FALSE
chr2	33623905	G	T	0.00262	LTBP1	+	FALSE
chr17	49042242	T	C	0.00054	SPAG9	-	TRUE	AluJb	SINE,Alu
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr1	53289852	A	G	0.00020	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr1	1607574	C	T	0.00187	CDK11B,SLC35E2B	-	FALSE
chr1	19984104	A	C	0.00402	MINOS1-NBL1,NBL1	+	FALSE
chr14	75202698	A	G	6.15110E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	10521254	T	C	0.00522	DFFA	-	TRUE	AluY	SINE,Alu
chr1	45975358	A	G	0.00089	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	28824041	T	A	0.00872	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	110040310	A	G	2.45230E-05	CYB561D1	+	FALSE
chr1	35817023	G	C	0.00030	ZMYM4	+	FALSE
chr21	44331718	A	G	0.00410		.	FALSE	AluJb	SINE,Alu
chr2	206862015	G	A	0.00368	INO80D	-	FALSE
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr3	196044972	C	T	0.00258	TCTEX1D2,TM4SF19-TCTEX1D2	-	FALSE
chr2	97020049	T	C	0.00070	NCAPH	+	FALSE
chr2	112252464	G	A	2.95640E-06	MIR4435-2HG	-	FALSE
chrX	123046302	A	G	0.00649	XIAP	+	TRUE	AluJb	SINE,Alu
chr3	196556843	G	A	4.00732E-06	PAK2	+	FALSE
chr1	38182333	G	T	0.00063	EPHA10	-	FALSE	L2d2	SINE,Alu
chr2	75120159	C	T	0.00180	HK2	+	FALSE
chr1	145324363	G	C	0.00895	NBPF20,NBPF10	+	FALSE
chr1	205129319	G	A	0.00177	DSTYK	-	FALSE
chr9	136209397	G	C	0.00709	MED22	-	FALSE
chr1	145116149	T	A	0.00585	NBPF20,SEC22B	+	FALSE
chr2	160084473	A	C	0.00101	TANC1	+	FALSE
chr1	16889004	C	T	0.00977	NBPF1	-	FALSE
chr1	144053567	C	T	0.00037		.	FALSE
chr14	69704553	G	T	7.62587E-05	EXD2	+	FALSE
chr1	19542250	T	C	9.94571E-09	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr17	65334867	T	C	1.03096E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	202031806	A	T	0.00543	CFLAR	+	FALSE
chr1	118069696	T	C	0.00170		.	FALSE
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	149913733	T	C	0.00143	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr6	114178851	T	C	0.00056	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr1	17345245	C	T	0.00812	SDHB	-	FALSE
chr2	170488325	A	G	0.00698	PPIG	+	FALSE
chr3	45722396	A	G	0.00337	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr2	219134117	C	T	0.00357	AAMP	-	FALSE
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr1	85786957	T	G	0.00959	DDAH1	-	FALSE
chr3	12624321	A	G	2.86985E-06	MKRN2	+	FALSE
chr3	42591956	G	A	0.00030	SEC22C	-	FALSE
chr3	155572129	C	T	0.00082	SLC33A1	-	FALSE
chrX	3526615	G	T	0.00820	PRKX	-	FALSE
chr5	171533782	T	C	0.00039	STK10	-	FALSE
chr2	37331531	T	C	0.00389		.	FALSE	AluJb	SINE,Alu
chr9	21863618	T	C	0.00148	MTAP	+	FALSE	AluY	SINE,Alu
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	78414310	C	A	0.00067	FUBP1	-	FALSE
chr4	128756656	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	36386884	C	T	0.00590	AGO1	+	FALSE
chr1	160990875	T	C	9.42851E-06	F11R	-	FALSE
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	10520153	T	C	0.00907		.	FALSE	AluSx	SINE,Alu
chr1	109856391	G	C	0.00569	SORT1	-	FALSE
chr1	36789546	A	G	0.00623	EVA1B	-	FALSE	MIRb	SINE,Alu
chr1	145512081	A	G	0.00579	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr20	42933642	T	C	0.00275	FITM2	-	TRUE	AluJo	SINE,Alu
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	19586532	A	G	0.00188	MRTO4	+	TRUE	AluSz	SINE,Alu
chr3	5258431	G	A	3.44849E-09	EDEM1	+	FALSE
chr1	33149376	A	G	0.00284	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	152020782	C	T	0.00989	RPS3A	+	FALSE
chr2	99812978	A	G	0.00167	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	37230734	C	T	0.00025	HEATR5B	-	FALSE
chr5	122165512	C	A	0.00276	SNX2	+	FALSE
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr11	118947634	C	T	0.00276	VPS11	+	FALSE
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr14	50320630	G	C	0.00316		.	FALSE	7SLRNA	SINE,Alu
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr1	26608009	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	10519946	T	C	0.00080		.	FALSE	AluJr	SINE,Alu
chr1	9328255	A	G	0.00729	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	19981886	T	G	0.00082	MINOS1-NBL1,NBL1	+	FALSE
chr1	46075663	A	G	0.00240	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	45280109	A	G	0.00591		.	FALSE	AluYk3	SINE,Alu
chr2	200792052	G	A	0.00378	C2orf69	+	FALSE
chr2	85773689	T	C	0.00104	GGCX	-	TRUE	AluSx1	SINE,Alu
chr1	70718273	A	T	0.00256		.	FALSE
chr1	118502757	G	A	0.00793	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	204526611	A	G	0.00402	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	5937327	C	T	0.00703	NPHP4	-	FALSE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	160967848	T	C	0.00200	F11R	-	TRUE	AluSp	SINE,Alu
chr1	151862656	T	C	0.00933	THEM4	-	TRUE	AluSp	SINE,Alu
chr17	60522250	A	G	0.00267	METTL2A	+	FALSE
chr4	7762848	G	A	4.98180E-08	AFAP1,AFAP1-AS1	+,-	FALSE
chr6	17557416	G	T	0.00885	CAP2	+	FALSE
chr3	24019977	A	C	0.00281	NR1D2	+	FALSE
chr19	11945632	A	G	2.87422E-05	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	19543249	T	C	1.15194E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr19	9673276	C	A	0.00085		.	FALSE	Tigger1	SINE,Alu
chr1	144596446	A	G	0.00124	NBPF20	+	TRUE	AluJb	SINE,Alu
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr1	153909069	G	C	5.11201E-05	DENND4B	-	FALSE
chr1	117618067	C	T	0.00118	TTF2	+	FALSE
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr1	27992823	A	C	0.00087	IFI6	-	FALSE	FAM	SINE,Alu
chr1	988503	A	T	8.91206E-06	AGRN	+	FALSE
chr2	234438139	A	G	0.00220	USP40	-	FALSE
chr1	16932144	A	C	7.50683E-06	NBPF1	-	FALSE
chr6	33384325	G	T	0.00456		.	FALSE
chr1	65692499	C	T	0.00516	AK4	+	FALSE	(T)n	SINE,Alu
chr2	217366590	A	G	0.00013		.	FALSE	AluSz	SINE,Alu
chr16	31469051	T	C	0.00278		.	FALSE	AluSz	SINE,Alu
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	120612006	G	A	0.00930	NOTCH2	-	FALSE
chr1	53291435	A	G	0.00790	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	1595078	T	C	0.00714	CDK11B,SLC35E2B	-	FALSE	AluSg	SINE,Alu
chr19	7116734	A	T	0.00981	INSR	-	FALSE	(A)n	SINE,Alu
chr6	42094498	T	C	0.00931	C6orf132	-	TRUE	AluSq2	SINE,Alu
chr1	16918734	G	C	0.00083	NBPF1	-	FALSE
chr12	98943103	A	G	0.00306	TMPO	+	TRUE	AluSz	SINE,Alu
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr11	119533726	A	G	0.00169	NECTIN1	-	FALSE
chr4	39550967	T	C	2.19217E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr7	29961939	G	T	1.47033E-05	SCRN1	-	FALSE
chr1	10517998	T	C	0.00821		.	FALSE	AluJr	SINE,Alu
chr1	226333560	A	T	0.00339	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	100654773	T	C	0.00810	DBT	-	TRUE	AluSz	SINE,Alu
chr1	9161245	T	C	0.00480		.	FALSE	AluSx	SINE,Alu
chr2	37075013	T	A	0.00754	STRN	-	FALSE
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr1	26604691	G	C	0.00043	CEP85	+	FALSE
chr15	30781885	C	T	0.00380		.	FALSE
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr3	197399402	T	C	0.00840	RUBCN	-	FALSE
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr16	427820	C	T	0.00240	TMEM8A	-	FALSE
chr1	27202844	T	C	0.00076		.	FALSE	AluSq2	SINE,Alu
chr1	1344893	A	G	0.00186		.	FALSE	AluSg	SINE,Alu
chr1	16889217	G	C	0.00696	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	28835934	A	G	0.00069	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr2	217366499	A	G	0.00183		.	FALSE	AluSz	SINE,Alu
chr1	145688973	A	G	0.00017	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr2	238499528	T	G	0.00332	RAB17	-	FALSE
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr7	12250939	G	A	0.00537	TMEM106B	+	FALSE
chr1	10520984	G	T	0.00305	DFFA	-	FALSE	AluY	SINE,Alu
chr1	68943486	C	T	0.00079	DEPDC1	-	FALSE	(TTCTCTT)n	SINE,Alu
chr11	20101744	C	A	0.00540	NAV2	+	FALSE
chr4	17802890	T	C	0.00303	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	28824065	C	T	0.00345	PHACTR4	+	FALSE
chr2	172412008	C	G	0.00982	CYBRD1	+	FALSE
chr10	75008965	T	C	0.00017	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	92862879	A	G	3.90108E-09		.	FALSE	AluJr	SINE,Alu
chr5	139680027	A	G	0.00155	PFDN1	-	FALSE
chr2	61276750	A	G	0.00231	PEX13	+	TRUE	AluSp	SINE,Alu
chr2	36776054	C	T	0.00028	CRIM1	+	FALSE
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr1	149913513	T	C	0.00495	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr2	86249961	T	C	0.00067	LOC90784	-	TRUE	AluJr	SINE,Alu
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr1	45244413	T	A	0.00748		.	FALSE
chr12	123253723	A	G	0.00371	DENR	+	TRUE	(AT)n	SINE,Alu
chr1	40538317	C	A	0.00178	CAP1	+	FALSE
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr17	27872313	T	C	0.00226	TAOK1	+	FALSE
chr22	29904354	G	A	0.00072	THOC5	-	FALSE
chr4	88059194	C	T	0.00681	AFF1	+	FALSE
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr3	10192826	A	G	0.00037	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	24225006	A	G	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	179044110	A	G	0.00176	FAM20B	+	TRUE	AluSx	SINE,Alu
chr19	21273765	A	G	0.00253	ZNF714	+	FALSE	AluSc	SINE,Alu
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr16	75479474	T	C	2.06057E-06	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr3	15483830	A	G	3.44106E-05	EAF1	+	FALSE
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr4	101947014	G	C	0.00140	PPP3CA	-	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr3	30733690	C	A	0.00353	TGFBR2	+	FALSE
chr1	1656557	T	C	0.00061	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr1	33149414	A	G	0.00722	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr17	25640295	T	A	0.00154	WSB1	+	FALSE
chr1	152187183	C	A	0.00373	HRNR	-	FALSE
chr1	19543349	T	C	2.12419E-08	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	74090064	A	T	0.00197	STAMBP	+	FALSE
chr1	145513017	A	G	0.00037	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	32827843	G	C	0.00275	FAM229A	-	FALSE
chr1	47905553	G	A	0.00098	FOXD2	+	FALSE
chr1	53684924	A	G	0.00347	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr1	203711876	G	A	0.00444	ATP2B4	+	FALSE
chr1	144931101	G	A	0.00358	NBPF20,PDE4DIP	+,-	FALSE
chr2	37429626	A	G	0.00028	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr17	8286136	T	A	0.00706	RPL26	-	FALSE
chr5	38478065	T	A	0.00049	LIFR	-	FALSE
chr1	109535116	G	A	0.00013	WDR47	-	FALSE
chr1	205737659	C	T	0.00024	RAB29	-	FALSE	AluSq2	SINE,Alu
chr3	160219829	C	T	0.00654	KPNA4	-	FALSE	(TA)n	SINE,Alu
chr1	201975173	G	T	0.00356	RNPEP	+	FALSE
chr7	6501836	A	C	0.00081	KDELR2	-	FALSE
chr7	44841646	A	C	0.00316	PPIA	+	FALSE	AluJr	SINE,Alu
chr1	569782	T	C	0.00010		.	FALSE
chr1	11119935	G	T	2.46542E-05	SRM	-	FALSE
chr1	101444071	G	A	0.00963	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr3	196230564	G	C	0.00842	RNF168	-	FALSE
chr10	75009720	T	C	0.00016	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	53289873	A	G	0.00013	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	326539	A	G	0.00450		.	FALSE
chr1	148003749	T	C	0.00050	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	78483452	C	T	0.00094	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr1	87211940	A	C	0.00164	SH3GLB1	+	FALSE
chr5	149823791	G	T	0.00480		.	FALSE
chr1	150937771	T	A	0.00026	CERS2	-	FALSE	(ATTTTTT)n	SINE,Alu
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	36067752	T	C	1.27861E-08	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr13	52952575	G	A	0.00030	THSD1	-	FALSE
chr1	10518733	T	C	0.00541		.	FALSE	AluSx1	SINE,Alu
chr1	1595540	T	C	0.00830	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr2	109401284	G	C	0.00059	RANBP2	+	FALSE
chr1	567489	T	C	0.00119		.	FALSE
chr2	47562597	A	G	0.00016	LOC101927043	-	FALSE	BC200	SINE,Alu
chr1	36068275	T	C	0.00048	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	31732603	A	C	0.00164	SNRNP40	-	FALSE
chr10	61548856	T	C	0.00067	CCDC6	-	FALSE
chr1	52306075	T	C	0.00135	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	9161668	T	C	0.00456		.	FALSE
chr15	44751350	C	T	0.00260	CTDSPL2	+	FALSE
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr1	65900357	G	T	0.00851	LEPR,LEPROT	+	FALSE
chr4	39551008	T	C	0.00106	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	28836975	A	G	0.00782	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr5	37290571	T	C	0.00097		.	FALSE	AluSz	SINE,Alu
chr7	100958270	T	C	0.00087	LOC101927746,IFT22	+,-	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	16933623	G	A	0.00789	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	1337735	T	G	3.46713E-05	MRPL20	-	FALSE
chr10	75010139	T	C	0.00323	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr15	42861741	A	G	0.00200	HAUS2	+	TRUE	AluJb	SINE,Alu
chr1	17298140	C	G	0.00584	CROCC	+	FALSE
chr1	1534676	C	T	4.01953E-10	FNDC10	-	FALSE
chr1	3371371	C	G	0.00844	ARHGEF16	+	FALSE
chr9	111779229	T	C	0.00269	TMEM245	-	FALSE
chr19	46214293	C	T	0.00137	FBXO46	-	FALSE
chr2	202032184	A	G	0.00954	CFLAR	+	FALSE	AluJo	SINE,Alu
chr1	10517992	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr1	51434560	G	A	6.87938E-05	CDKN2C	+	FALSE
chr12	98942665	A	G	1.31028E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr11	3716835	C	T	0.00828	NUP98	-	FALSE
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr9	131872860	C	T	0.00141	CRAT	-	FALSE
chr1	1018144	T	C	0.00019	C1orf159	-	FALSE
chr1	1650787	T	C	0.00590	CDK11B,CDK11A	-	FALSE
chr5	74669972	C	T	0.00711	COL4A3BP	-	FALSE
chr1	151778899	T	C	0.00475	RORC	-	FALSE
chr1	28662213	A	G	0.00013	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	120612163	C	A	0.00812	NOTCH2	-	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr12	56510698	C	G	0.00944	RPL41	+	FALSE
chr2	201774185	T	C	0.00921		.	FALSE	AluSz	SINE,Alu
chr2	114356360	G	A	0.00520	WASH2P	+	FALSE
chr1	28834154	G	T	0.00012	SNHG3,RCC1	+	FALSE	AluSg	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr20	35520976	T	C	0.00254	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr2	201749994	T	C	0.00496	PPIL3	-	TRUE	AluSx	SINE,Alu
chr1	93617546	T	C	0.00026	TMED5	-	FALSE
chr1	151092875	A	G	0.00154	GABPB2	+	TRUE	AluSp	SINE,Alu
chr1	94351062	T	A	0.00189	GCLM	-	FALSE
chr4	73957426	G	T	0.00434	ANKRD17	-	FALSE
chr5	138705183	T	A	9.01084E-05	PAIP2,SLC23A1	+,-	FALSE
chr6	27860480	G	A	0.00908	HIST1H2AM	-	FALSE
chr1	100316589	A	G	0.00147	AGL	+	FALSE
chr12	133298423	A	G	2.89213E-13	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	145512014	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr1	180063334	G	A	2.71425E-05	CEP350	+	FALSE
chr19	41220529	C	T	0.00175	COQ8B	-	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr1	28661653	A	G	9.75782E-05	MED18	+	TRUE	AluSg	SINE,Alu
chr1	10517290	T	C	0.00437		.	FALSE	AluJr	SINE,Alu
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr2	61277486	A	G	0.00355	PEX13	+	TRUE	AluSx	SINE,Alu
chr3	101399939	G	T	1.18387E-05	RPL24	-	FALSE
chr12	120898661	A	G	2.17580E-05	GATC	+	TRUE	AluY	SINE,Alu
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chr10	75009591	T	C	8.39163E-08	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr2	20097874	T	C	0.00769	TTC32	-	FALSE
chr1	10043053	A	G	0.00318	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	168212509	A	G	0.00765		.	FALSE
chr1	31905886	C	A	0.00335	SERINC2	+	FALSE
chr2	131104524	G	A	0.00912	IMP4	+	FALSE	L1MA9	SINE,Alu
chr6	29910583	C	T	4.95604E-05		.	FALSE
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr14	75202950	A	G	0.00307	FCF1	+	TRUE	AluSx	SINE,Alu
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr2	48605828	T	A	0.00650	FOXN2	+	FALSE	(T)n	SINE,Alu
chr4	109551183	T	A	0.00270	RPL34	+	FALSE
chr4	57801150	A	T	0.00462	REST	+	FALSE
chr1	53359182	A	G	0.00321	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr3	195694465	T	C	0.00300	SDHAP1	-	FALSE
chr1	179829200	T	C	0.00497	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr7	20177664	T	C	0.00089	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr2	20192696	G	A	0.00400	MATN3,LOC101928222	+,-	FALSE
chr1	6282334	T	C	0.00408	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	37331116	T	C	0.00481		.	FALSE	AluSx1	SINE,Alu
chr3	194124624	C	T	0.00502	ATP13A3	-	FALSE
chr1	154454628	T	C	0.00099	SHE	-	TRUE	AluSq2	SINE,Alu
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr11	8707396	C	A	0.00081	RPL27A	+	FALSE
chr5	56177851	A	T	0.00796	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr3	44791512	T	C	1.32337E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	56763328	T	C	0.00546	ARHGEF3	-	FALSE
chr1	163288931	G	A	0.00284	RGS5	-	FALSE	MamRep1527	SINE,Alu
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr3	184429155	A	T	0.00056	MAGEF1	-	FALSE
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr1	173457945	G	A	0.00287	PRDX6	+	FALSE
chr1	932618	C	G	0.00569		.	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr15	42859922	A	G	0.00731	HAUS2	+	TRUE	AluSx1	SINE,Alu
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr6	74134869	T	C	0.00024	MB21D1	-	TRUE	AluSz	SINE,Alu
chr1	10519112	T	C	0.00333		.	FALSE	AluSx3	SINE,Alu
chr1	142688511	T	C	0.00089		.	FALSE
chr6	42856157	A	G	0.00081	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	15993699	C	A	0.00011		.	FALSE	AluSx4	SINE,Alu
chr1	158057633	C	G	0.00031	KIRREL	+	FALSE
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr10	72187740	C	A	0.00668	EIF4EBP2	+	FALSE
chr2	238244963	A	G	0.00124	COL6A3	-	FALSE
chr2	37331019	T	C	0.00033		.	FALSE	AluSx1	SINE,Alu
chr3	169492101	C	T	0.00402	MYNN	+	FALSE
chr1	1419888	A	G	0.00630	ATAD3B	+	TRUE	AluSp	SINE,Alu
chr3	119545349	T	C	0.00805	GSK3B	-	FALSE
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	15114398	T	C	0.00758	RBSN	-	TRUE	AluY	SINE,Alu
chr1	28825337	A	G	0.00313	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	16957414	C	T	0.00708		.	FALSE
chr1	39500293	T	A	0.00552	NDUFS5	+	FALSE
chr2	86252080	T	C	0.00017	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	1666834	G	A	0.00037	SLC35E2	-	FALSE	L1MEg	SINE,Alu
chr2	39212567	T	G	0.00546	SOS1	-	FALSE
chr10	71993094	T	G	0.00078	PPA1	-	FALSE
chr1	11722350	C	A	0.00355	FBXO44	+	FALSE	OldhAT1	SINE,Alu
chr4	88059664	T	G	0.00178	AFF1	+	FALSE	(GT)n	SINE,Alu
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr12	133298019	A	G	2.77684E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chrX	77083641	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	173864944	G	T	0.00415		.	FALSE
chr1	179830012	A	C	0.00303	TOR1AIP2	-	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr1	176176230	G	A	0.00168	RFWD2	-	FALSE
chr1	40539211	A	T	0.00105	PPT1	-	FALSE
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr1	145284175	G	C	0.00562	NBPF20,NOTCH2NL	+	FALSE
chr1	20945055	C	T	0.00269	CDA	+	FALSE

RBP	DDX27
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR210RWL
Platform	HiSeq
Pubmed ID	32252787

DDX27 - Target Gene Network