RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr3	148748198	G	A	3.62985E-05	HLTF	-	FALSE
chr1	10518733	T	C	0.00399		.	FALSE	AluSx1	SINE,Alu
chr8	25272425	C	T	0.00605	DOCK5	+	FALSE
chr2	64687665	C	A	0.00976	LGALSL	+	FALSE
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr1	10043043	A	G	0.00529	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	156044213	G	T	7.72130E-05	MEX3A	-	FALSE	(T)n	SINE,Alu
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr4	107246251	G	T	3.16074E-09	AIMP1	+	FALSE
chr1	6283296	T	C	0.00122	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	59122056	G	C	1.57132E-06	MYSM1	-	FALSE
chr5	40835311	A	T	0.00632	RPL37	-	FALSE
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	1344757	A	G	0.00024		.	FALSE	AluSx1	SINE,Alu
chr4	57327092	A	G	0.00091	PAICS	+	TRUE	AluSx1	SINE,Alu
chr12	27574433	A	G	0.00473	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	53289892	A	G	0.00178	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	25894460	T	A	0.00520	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	20977533	G	C	0.00234	PINK1,PINK1-AS	+,-	FALSE
chr2	112252629	A	C	0.00107	MIR4435-2HG	-	FALSE
chr6	149915565	A	G	0.00198	RPS18P9	+	FALSE
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr1	151778899	T	C	0.00475	RORC	-	FALSE
chr1	22929376	A	G	0.00378	EPHA8	+	FALSE
chr11	769889	T	C	0.00211	PDDC1	-	TRUE	AluY	SINE,Alu
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr4	128757415	A	G	0.00367		.	FALSE	AluY	SINE,Alu
chr16	88789700	C	T	0.00703	PIEZO1	-	FALSE
chr11	490771	C	T	0.00600	PTDSS2	+	FALSE
chr1	77166017	G	A	0.00627		.	FALSE
chr12	133298254	A	G	1.64181E-10	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr2	61278017	A	G	8.96590E-05	PEX13	+	TRUE	AluY	SINE,Alu
chr19	16661483	T	C	0.00824	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr19	46053393	T	C	0.00514	OPA3	-	TRUE	AluSx1	SINE,Alu
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr2	37330435	T	C	3.14905E-06		.	FALSE	AluSq2	SINE,Alu
chr1	26887592	T	C	0.00354	RPS6KA1	+	FALSE
chr2	85548074	T	C	0.00428	TGOLN2	-	FALSE
chr2	86364710	T	C	0.00273	PTCD3	+	FALSE
chr2	64859679	T	C	0.00824	SERTAD2	-	FALSE
chr1	1662764	T	C	0.00505	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	19585772	G	A	2.66054E-05	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	244572644	G	C	0.00033	ADSS	-	FALSE
chr1	16932912	T	C	0.00525	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr7	6064011	T	A	0.00246	EIF2AK1	-	FALSE
chr2	73480136	T	A	0.00281	CCT7	+	FALSE
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	91990445	A	G	5.21972E-05	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr1	247319707	C	T	3.10675E-05	ZNF124	-	FALSE
chr15	41591039	A	G	0.00214	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	16112795	A	G	0.00499	FBLIM1	+	FALSE
chr6	160100882	T	C	0.00494	SOD2	-	TRUE	AluSz	SINE,Alu
chr10	75010139	T	C	0.00323	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr1	54493197	T	C	0.00064	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr22	41252612	G	A	0.00561	ST13	-	FALSE
chr4	5830393	C	T	0.00220	CRMP1	-	FALSE
chr1	145512074	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr4	89181431	T	C	5.21801E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	25169201	G	T	0.00341	CLIC4	+	FALSE
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr1	213244381	G	A	0.00345	RPS6KC1	+	FALSE
chr1	150937961	A	C	0.00060	CERS2	-	FALSE	G-rich	SINE,Alu
chr5	96366330	G	C	0.00251		.	FALSE	(TG)n	SINE,Alu
chr16	81744038	T	C	6.34278E-05	CMIP	+	FALSE	(CCGC)n	SINE,Alu
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr2	55199563	G	T	0.00172	RTN4	-	FALSE
chr11	119533723	A	G	0.00169	NECTIN1	-	FALSE
chr1	161488017	T	C	5.55712E-05	FCGR2A	+	FALSE	MER57F	SINE,Alu
chr2	48605828	T	A	0.00650	FOXN2	+	FALSE	(T)n	SINE,Alu
chr3	40560101	A	G	0.00322		.	FALSE	AluSc8	SINE,Alu
chr1	47184569	G	C	0.00027	EFCAB14	-	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr11	67782827	G	A	0.00163	ALDH3B1	+	FALSE
chr10	101992810	T	C	0.00456	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	70717293	G	A	0.00716	SRSF11	+	FALSE
chr4	39550978	T	C	0.00558	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr17	42876791	T	C	0.00461	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	108113839	T	C	0.00062	VAV3	-	FALSE
chr6	31236900	G	A	0.00167		.	FALSE
chr4	128756632	A	G	0.00602		.	FALSE	AluSx	SINE,Alu
chr7	138764145	T	C	0.00399	ZC3HAV1	-	FALSE
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr3	195962244	G	T	0.00083		.	FALSE
chr2	176792536	G	T	0.00211	LNPK	-	FALSE
chr2	189877305	T	C	0.00612	COL3A1	+	FALSE
chr1	145500917	G	C	0.00930	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	145284883	A	G	0.00062	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr5	172461896	T	A	0.00335	ATP6V0E1	+	FALSE
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr3	122293773	A	T	0.00852	DTX3L	+	FALSE
chr1	78414310	C	A	0.00131	FUBP1	-	FALSE
chr1	46159823	T	A	0.00461	TMEM69	+	FALSE
chr3	49067809	T	A	0.00022	QRICH1	-	FALSE
chr1	228520973	C	G	0.00875	OBSCN	+	FALSE
chr12	96661613	A	G	0.00183	ELK3	+	FALSE
chr1	1309885	A	G	0.00010	AURKAIP1	-	FALSE
chr1	45975286	A	G	0.00200	MMACHC	+	TRUE	AluSg7	SINE,Alu
chrX	3526658	A	T	0.00152	PRKX	-	FALSE	(AC)n	SINE,Alu
chr2	204055625	G	A	0.00426	NBEAL1	+	FALSE
chr6	150046601	T	C	0.00073	NUP43	-	TRUE	AluSq2	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr1	16894514	C	T	0.00270	NBPF1	-	FALSE
chr1	201846630	C	A	0.00212	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	36067760	T	C	0.00213	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	226923938	A	C	0.00160	ITPKB	-	FALSE
chr1	28662057	A	G	3.94650E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	54382632	T	C	0.00219		.	FALSE	AluSq2	SINE,Alu
chr1	6582353	T	C	0.00415	NOL9	-	TRUE	AluSx1	SINE,Alu
chr3	179115635	T	C	0.00453	GNB4	-	TRUE	AluSg7	SINE,Alu
chr3	122283294	G	C	0.00066	DTX3L,PARP9	+,-	FALSE
chr1	89447715	T	G	0.00021	KYAT3,RBMXL1	-	FALSE
chr1	16932428	C	G	0.00197	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr1	36067760	T	C	0.00044	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	61922501	A	C	0.00231	NFIA	+	FALSE	A-rich	SINE,Alu
chr1	95123291	G	C	0.00040	LINC01057	-	FALSE	LTR7Y	SINE,Alu
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	46075777	A	G	0.00268	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr3	10976876	A	G	0.00343	SLC6A11	+	FALSE
chrX	54587254	A	G	0.00019	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr4	6718775	G	T	3.33433E-09	BLOC1S4	+	FALSE
chr2	85546474	T	C	0.00051	TGOLN2	-	TRUE	AluSc	SINE,Alu
chr2	113962806	A	G	0.00309		.	FALSE	AluSz	SINE,Alu
chr2	204162597	A	G	0.00296	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr3	10193797	A	G	0.00261	VHL	+	TRUE	AluSx	SINE,Alu
chr1	1252184	A	G	0.00778	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr1	148558269	A	G	0.00744	NBPF15	+	FALSE	AluJb	SINE,Alu
chr3	185009713	G	T	0.00106	MAP3K13	+	FALSE
chr1	44035352	C	T	0.00170	PTPRF	+	FALSE
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr1	1344998	A	G	0.00461		.	FALSE	AluSg	SINE,Alu
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr1	145689537	A	G	0.00028	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr1	146627405	C	G	0.00074	PRKAB2	-	FALSE
chr2	73460315	C	T	0.00315	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	44818526	C	G	0.00326	ERI3	-	FALSE
chr12	7074517	C	T	0.00369	PHB2	-	FALSE
chr12	98942665	A	G	1.31028E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr10	70742774	A	T	0.00504	DDX21	+	FALSE
chr1	150548881	G	A	9.52924E-05	MCL1	-	FALSE
chr6	42855954	A	G	3.50340E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	118472382	G	T	0.00029	WDR3	+	FALSE
chr2	128952699	A	G	0.00497	UGGT1	+	TRUE	AluSp	SINE,Alu
chr1	16641899	C	T	0.00213	FBXO42	-	FALSE
chr7	30616247	T	C	0.00887	LOC401320	-	FALSE	THE1B	SINE,Alu
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chr1	10519947	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr2	99813015	A	G	0.00235	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	53289892	A	G	0.00505	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	144931330	C	T	0.00479	NBPF20,PDE4DIP	+,-	FALSE
chr1	179042300	C	A	0.00491	FAM20B	+	FALSE
chr1	52306079	T	A	0.00606	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr8	133859871	T	A	0.00027	PHF20L1	+	FALSE
chr1	1634860	G	T	0.00103	CDK11B,CDK11A	-	FALSE
chr1	201845903	A	G	0.00041	IPO9	+	FALSE
chr5	10435491	G	A	0.00606	MARCH6	+	FALSE
chr19	53914806	A	G	0.00221	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	100658578	G	A	0.00382	DBT	-	FALSE
chr1	10596341	C	T	0.00552	PEX14	+	FALSE
chr1	180082720	G	A	0.00577	CEP350	+	FALSE
chr3	40578935	A	G	0.00063	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	118502087	C	T	0.00585	WDR3,SPAG17	+,-	FALSE
chr1	1650832	A	G	0.00407	CDK11B,CDK11A	-	FALSE
chr1	10520099	T	C	6.30717E-05		.	FALSE	AluSx	SINE,Alu
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr1	36531781	G	A	0.00288		.	FALSE
chr6	31378387	T	C	0.00207		.	FALSE
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	31554465	A	T	1.69098E-06	C5orf22	+	FALSE
chr1	16932495	A	C	0.00199	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	11181327	C	T	0.00573	MTOR	-	FALSE
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr1	10521238	T	C	0.00173	DFFA	-	TRUE	AluY	SINE,Alu
chr5	112350098	C	T	7.36383E-05	DCP2	+	FALSE
chr2	191067764	A	T	0.00165	C2orf88	+	FALSE
chr1	145112414	T	C	0.00079	NBPF20,SEC22B	+	FALSE
chr2	75887834	T	C	0.00024	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr19	583145	G	A	0.00227	BSG	+	FALSE
chr1	36068369	T	C	0.00404	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	148004475	C	G	7.81276E-06	NBPF8	-	FALSE
chr1	16932968	G	A	0.00074	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr12	80014907	A	T	0.00737	PAWR	-	FALSE
chr1	6681544	T	C	0.00031	PHF13	+	FALSE
chr1	112170151	A	G	0.00137	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr3	150345451	A	G	2.37481E-05	SELT	+	TRUE
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr1	28835847	A	G	5.60567E-05	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr17	5377119	A	T	0.00043	DERL2	-	FALSE	FLAM_C	SINE,Alu
chr1	8045341	T	A	0.00750	PARK7	+	FALSE
chr1	28825418	A	G	0.00046	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	77759578	A	G	0.00031	AK5	+	FALSE
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	924639	A	G	0.00285	GET4	+	TRUE	AluJb	SINE,Alu
chr10	71647223	A	C	0.00114	COL13A1	+	FALSE
chr1	36067752	T	C	0.00031	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	36068237	T	C	0.00974	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	150704413	T	C	0.00236	CTSS	-	TRUE	AluJo	SINE,Alu
chr22	18572728	A	G	0.00050	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	6582221	T	C	0.00879	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	16893721	A	C	0.00043	NBPF1	-	FALSE
chr1	93617406	A	T	0.00275	TMED5	-	FALSE
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	154554950	G	T	0.00599	ADAR	-	FALSE
chr16	57505656	T	G	0.00107	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr2	234749258	T	C	0.00710	HJURP	-	FALSE
chr1	19543457	T	C	0.00059	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr1	36923643	G	C	0.00409	MRPS15	-	FALSE
chr3	183900680	G	C	0.00294	AP2M1	+	FALSE	MIR3	SINE,Alu
chr5	53841241	T	A	0.00372	SNX18	+	FALSE
chr6	34254565	A	T	0.00617		.	FALSE	(A)n	SINE,Alu
chr1	115313039	A	G	0.00895	SIKE1	-	FALSE
chr4	17802824	T	C	0.00594	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	87573325	C	T	0.00121	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr2	20449068	A	G	0.00014	PUM2	-	FALSE
chr2	75888160	A	C	0.00188	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr1	23381596	T	C	0.00762	KDM1A	+	FALSE
chr9	128729384	G	C	0.00059	PBX3	+	FALSE
chr3	196670094	G	C	5.91401E-08	NCBP2-AS2	+	FALSE
chr1	27204516	T	C	0.00028		.	FALSE	AluSg7	SINE,Alu
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10521200	T	C	3.54723E-07	DFFA	-	TRUE	AluY	SINE,Alu
chr5	64023977	C	T	0.00340	SREK1IP1	-	FALSE	(TTTTTTT)n	SINE,Alu
chr2	55459824	C	T	0.00763	RPS27A	+	FALSE
chr20	35520935	T	C	0.00120	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr1	148594563	G	T	0.00169	NBPF15	+	FALSE
chr2	99812464	A	G	1.88485E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	140798639	G	C	3.89156E-05	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7	+	FALSE
chr1	200375847	T	G	0.00027	ZNF281	-	FALSE	(T)n	SINE,Alu
chr14	53243434	T	C	0.00421	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr3	8922054	T	C	0.00300	RAD18	-	FALSE
chr3	49395695	A	C	0.00159	GPX1	-	FALSE
chr4	68483804	A	T	0.00720	UBA6	-	FALSE
chr3	15113655	T	C	6.08503E-07	RBSN	-	TRUE	AluSz6	SINE,Alu
chr2	61154325	T	C	0.00706	REL	+	FALSE	L2b	SINE,Alu
chr1	27992799	T	A	0.00014	IFI6	-	FALSE	FAM	SINE,Alu
chr1	16889820	C	T	0.00709	NBPF1	-	FALSE
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr1	31732599	T	G	0.00827	SNRNP40	-	FALSE
chr7	137561084	G	A	0.00194	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr3	12624321	A	G	2.86985E-06	MKRN2	+	FALSE
chr5	79923430	T	C	0.00817	DHFR	-	TRUE	AluJr	SINE,Alu
chr15	39880822	A	G	0.00281	THBS1	+	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr1	55207983	T	A	0.00018	MROH7-TTC4,TTC4	+	FALSE
chr2	113494520	T	C	0.00267	CKAP2L	-	FALSE	AluSx1	SINE,Alu
chr1	26755209	A	G	0.00745	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr2	68402360	A	G	0.00309	PNO1	+	FALSE
chr1	1595538	T	C	0.00586	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr2	17962998	T	A	0.01000	GEN1	+	FALSE
chr13	79188534	T	A	0.00698	RNF219-AS1,RNF219	+,-	FALSE
chr3	141668758	T	C	2.84489E-05	TFDP2	-	TRUE	AluSz	SINE,Alu
chr1	70718276	G	T	0.00493		.	FALSE
chr18	2763697	C	T	8.35636E-08	SMCHD1	+	FALSE
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr3	14526653	G	T	0.00936	SLC6A6	+	FALSE
chr14	68117864	A	T	0.00744	ARG2	+	FALSE
chr1	19586455	A	G	0.00296	MRTO4	+	TRUE	AluSz	SINE,Alu
chr12	64844149	A	G	0.00456		.	FALSE	AluJr4	SINE,Alu
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr5	130537006	C	A	0.00020	LYRM7	+	FALSE	AluSx4	SINE,Alu
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr1	6583036	T	C	0.00296	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	115249843	G	A	0.00218	NRAS	-	FALSE
chr2	189459785	C	T	0.00262	GULP1	+	FALSE
chr1	206635244	T	A	0.00195	SRGAP2	+	FALSE
chr1	233514975	G	T	0.00584	MLK4	+	FALSE
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr19	46214293	C	T	0.00137	FBXO46	-	FALSE
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr19	21367098	A	G	0.00147	ZNF431	+	TRUE	AluSc	SINE,Alu
chr1	19981865	A	G	0.00213	MINOS1-NBL1,NBL1	+	FALSE
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr3	195694465	T	C	0.00300	SDHAP1	-	FALSE
chr1	19543353	T	C	0.00081	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr8	30536544	T	C	5.33169E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr1	92975244	T	A	0.00220	EVI5	-	FALSE
chr3	196315260	T	C	0.00102	FBXO45	+	FALSE
chr3	49067308	G	A	0.00278	QRICH1	-	FALSE
chr8	12879062	T	C	0.00035	KIAA1456	+	FALSE
chr6	116600810	G	A	0.00028	DSE,TSPYL1	+,-	FALSE
chr1	28825331	A	G	0.00051	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	12677549	T	A	1.84464E-05	DHRS3	-	FALSE	(A)n	SINE,Alu
chr10	101563815	G	A	0.00218	ABCC2	+	FALSE
chr1	10519912	T	C	0.00942		.	FALSE	AluJr	SINE,Alu
chr1	200375404	T	G	0.00030	ZNF281	-	FALSE
chr1	32373858	A	T	0.00100	PTP4A2	-	FALSE
chr1	27202835	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr1	19934838	C	T	2.17786E-05	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr4	113152490	G	A	0.00221		.	FALSE
chr1	28906337	A	G	0.00810	SNHG12,SNORA61	-	FALSE
chr3	195436334	A	G	0.00017	LINC00969	+	TRUE	AluJr	SINE,Alu
chr3	149683506	G	C	0.00147	PFN2	-	FALSE
chr7	75115154	C	T	0.00405	POM121C	-	FALSE
chr5	149829068	C	T	0.00038	RPS14	-	FALSE
chr2	24223256	A	G	0.00711	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	33149414	A	G	5.81443E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	144833382	C	T	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr1	19543457	T	C	0.00143	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	177658896	A	C	0.00642	PHYKPL	-	FALSE
chr1	89479063	G	A	0.00151	GBP3	-	FALSE
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	3459371	G	A	0.00091	TRAPPC12	+	FALSE	L1MA2	SINE,Alu
chr2	217366196	T	A	0.00207		.	FALSE
chr3	197400501	C	G	0.00270	RUBCN	-	FALSE
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr2	74686329	C	T	0.00640	INO80B-WBP1,WBP1	+	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	20976032	T	C	9.95086E-05	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr2	68402152	T	C	0.00794	PNO1	+	FALSE
chrM	10307	A	C	0.00046		.	FALSE
chr17	61502458	T	A	0.00317	TANC2	+	FALSE
chr1	153782011	C	T	0.00913	GATAD2B	-	FALSE
chr1	45671430	A	T	0.00041	ZSWIM5	-	FALSE
chr3	14986104	T	C	0.00307	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr14	50361197	G	T	1.76251E-06	ARF6	+	FALSE
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr1	19542310	T	C	9.10228E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	16889044	T	A	0.00256	NBPF1	-	FALSE
chr3	120114914	G	A	1.07649E-06	FSTL1	-	FALSE
chr10	61548852	G	A	0.00693	CCDC6	-	FALSE
chr1	16944809	G	C	9.47535E-05	CROCCP2	-	FALSE
chr19	23926877	A	T	0.00896	ZNF681	-	FALSE
chr10	79570873	G	T	0.00292	DLG5	-	FALSE
chr1	6684050	G	A	2.21294E-05	PHF13	+	FALSE
chr7	100804140	C	T	0.00377	AP1S1	+	FALSE
chr1	36602202	T	C	0.00122	TRAPPC3	-	FALSE
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr1	19984104	A	C	0.00402	MINOS1-NBL1,NBL1	+	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr14	93712365	A	G	0.00210	BTBD7	-	FALSE
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr19	35741552	C	T	0.00165	LSR	+	FALSE
chr15	23282589	A	G	0.00291	HERC2P2	-	FALSE
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr1	67874697	T	C	0.00163	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	27732103	C	T	0.00786	WASF2	-	FALSE
chr2	201842391	T	C	0.00081	FAM126B	-	TRUE	AluJb	SINE,Alu
chr19	51305797	T	C	0.00397	C19orf48	-	TRUE	AluSg	SINE,Alu
chr16	3207363	C	T	0.00104		.	FALSE
chr11	94801632	C	A	0.00194	SRSF8	+	FALSE
chr2	24224134	A	G	9.70565E-06		.	FALSE	AluSp	SINE,Alu
chr11	111930765	T	C	0.00764	DLAT	+	FALSE
chr1	184761312	T	C	0.00077	FAM129A	-	TRUE	AluJo	SINE,Alu
chr4	57326262	A	G	2.33397E-05	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	155572129	C	T	0.00082	SLC33A1	-	FALSE
chr2	174086940	C	A	0.00047	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr3	48787052	T	C	0.00631	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	79279310	T	A	0.00173	MTX3	-	FALSE
chr2	202031806	A	T	0.00543	CFLAR	+	FALSE
chr1	3545192	C	G	0.00600	TPRG1L	+	FALSE
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr4	165996818	T	C	0.00804		.	FALSE	AluSg4	SINE,Alu
chr1	153591278	G	T	0.00119	S100A13	-	FALSE
chr1	16890639	C	T	8.47214E-05	NBPF1	-	FALSE
chr1	9644558	A	G	0.00451		.	FALSE	AluSx	SINE,Alu
chr1	10459165	G	A	2.83145E-06	PGD	+	FALSE
chr2	128601464	T	C	0.00161		.	FALSE	AluJr	SINE,Alu
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	109818158	C	T	0.00212	CELSR2	+	FALSE
chr1	28785729	G	A	0.00181	PHACTR4	+	FALSE
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr1	20224152	G	A	0.00581	OTUD3	+	FALSE
chr1	6283305	T	C	0.00554	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	40982394	C	T	0.00037	C7	+	FALSE	AluSx1	SINE,Alu
chr1	27204447	T	C	0.00513		.	FALSE	AluSg7	SINE,Alu
chr2	128064422	C	T	0.00039	MAP3K2	-	FALSE
chr1	94982784	T	A	0.00179	ABCD3	+	FALSE
chr1	207943385	A	G	0.00751	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	146740502	C	G	0.00692	CHD1L	+	FALSE
chr1	28826223	A	G	0.00990	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	206580084	C	G	0.00104	SRGAP2	+	FALSE
chr7	24731065	C	T	0.00414	MPP6	+	FALSE	(TGTATG)n	SINE,Alu
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr12	1611799	A	G	0.00156	LINC00942	+	FALSE
chr5	43609343	C	T	0.00556	NNT	+	FALSE
chr1	11982580	G	A	2.06927E-05	KIAA2013	-	FALSE
chr1	65299558	C	T	0.00161	JAK1	-	FALSE
chr3	14986453	T	C	1.05842E-07	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr5	177576458	A	T	0.00427		.	FALSE
chr2	220406239	T	G	0.00014	CHPF	-	FALSE	MIRb	SINE,Alu
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr2	27279013	A	G	6.08626E-07	AGBL5	+	FALSE
chr1	1152631	C	A	0.00439	SDF4	-	FALSE
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	10192642	A	G	0.00217	VHL	+	TRUE	AluSx1	SINE,Alu
chr12	56510708	A	G	0.00050	RPL41	+	FALSE
chr1	143135166	G	T	0.00325	LOC102723769	-	FALSE
chr1	36067817	T	C	0.00938	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	158067060	T	A	0.00114	KIRREL	+	FALSE
chr1	24296871	G	C	0.00733		.	FALSE	AluSg	SINE,Alu
chr1	179044181	A	G	0.00083	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	44791406	T	C	0.00598	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	19199221	C	T	0.00392	ALDH4A1	-	FALSE
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr2	61764922	G	C	0.00679	XPO1	-	FALSE
chr12	92537721	A	T	0.00057	BTG1	-	FALSE
chr2	208619675	A	G	0.00012	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	37328087	T	C	0.00335		.	FALSE
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr1	10518756	T	C	0.00600		.	FALSE	AluSx1	SINE,Alu
chr12	77438436	T	C	0.00187	E2F7	-	FALSE
chr6	109001952	A	G	0.00978	FOXO3	+	FALSE	(A)n	SINE,Alu
chr1	116243380	G	A	0.00426	CASQ2	-	FALSE
chr1	20978516	T	C	0.00774	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr1	85785550	C	A	0.00134	DDAH1	-	FALSE
chr1	70833400	C	T	0.00224	HHLA3	+	FALSE	LTR7	SINE,Alu
chr3	196044972	C	T	0.00258	TCTEX1D2,TM4SF19-TCTEX1D2	-	FALSE
chr2	32535746	A	G	0.00085		.	FALSE	AluJb	SINE,Alu
chr1	120612006	G	A	0.00602	NOTCH2	-	FALSE
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr3	172117458	A	C	0.00011	FNDC3B	+	FALSE
chr3	12942852	C	A	0.00458	IQSEC1	-	FALSE
chr12	10311410	A	G	0.00909	OLR1	-	FALSE
chr3	53259329	G	C	0.00036	TKT	-	FALSE
chr1	38423183	C	T	0.00210	SF3A3	-	FALSE	AluJo	SINE,Alu
chr7	128294489	G	T	0.00354	LINC01000	+	FALSE
chr1	154128838	G	T	0.00062	TPM3	-	FALSE
chr5	61683960	A	G	0.00491		.	FALSE
chr1	242251696	C	T	0.00335	PLD5	-	FALSE
chr3	49395692	G	A	0.00049	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr17	42225547	A	C	0.00240	C17orf53	+	FALSE
chr2	61764922	G	A	0.00268	XPO1	-	FALSE

RBP	FUBP3
Knock-Method	shRNA
RBP Family	KH_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR755KOM
Platform	HiSeq
Pubmed ID	32252787

FUBP3 - Target Gene Network