| RBP | FKBP4 |
| Knock-Method | shRNA |
| RBP Family | Non-canonical_RBP |
| Biosample Name | K562 |
| Tissue Type | Haematopoietic_and_lymphoid_tissue |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR379VXW |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr8 | 61655619 | C | T | 0.00475 | CHD7 | + | FALSE | ||
| chr4 | 77997064 | A | G | 0.00283 | CCNI | - | FALSE | (A)n | SINE,Alu |
| chr4 | 52888026 | A | C | 0.00677 | SGCB | - | FALSE | ||
| chr1 | 148595665 | A | G | 0.00141 | NBPF15 | + | TRUE | L1MC4 | SINE,Alu |
| chr1 | 9163328 | T | C | 0.00287 | . | FALSE | AluSp | SINE,Alu | |
| chr1 | 11783889 | A | G | 0.00746 | . | FALSE | AluSq | SINE,Alu | |
| chr2 | 101893247 | C | A | 0.00237 | RNF149 | - | FALSE | (A)n | SINE,Alu |
| chr10 | 53456599 | A | G | 0.00339 | PRKG1,CSTF2T | +,- | FALSE | ||
| chr3 | 191116133 | C | T | 0.00032 | CCDC50 | + | FALSE | ||
| chr1 | 40537947 | A | C | 0.00295 | CAP1 | + | FALSE | ||
| chr1 | 9740896 | C | T | 0.00078 | PIK3CD,PIK3CD-AS2 | +,- | FALSE | MLT1F1 | SINE,Alu |
| chr14 | 23300642 | C | A | 0.00266 | MRPL52 | + | FALSE | MIRb | SINE,Alu |
| chr2 | 131129926 | G | T | 0.00034 | PTPN18 | + | FALSE | ||
| chr1 | 179326882 | A | G | 0.00020 | SOAT1 | + | TRUE | AluJo | SINE,Alu |
| chr1 | 1595539 | T | C | 0.00053 | CDK11B,SLC35E2B | - | TRUE | AluJr | SINE,Alu |
| chr7 | 17384887 | A | G | 4.32861E-08 | AHR | + | TRUE | AluSc | SINE,Alu |
| chr1 | 10520178 | T | C | 2.78615E-06 | . | FALSE | AluSx | SINE,Alu | |
| chr3 | 23962339 | T | A | 0.00925 | RPL15 | + | FALSE | ||
| chr1 | 36534934 | A | G | 0.00464 | . | FALSE | AluJo | SINE,Alu | |
| chr1 | 203711876 | G | A | 0.00444 | ATP2B4 | + | FALSE | ||
| chr1 | 28564252 | A | G | 0.00118 | ATPIF1 | + | FALSE | ||
| chr2 | 131906031 | C | T | 0.00374 | PLEKHB2 | + | FALSE | ||
| chr1 | 19543249 | T | C | 0.00559 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr1 | 10521172 | T | C | 0.00244 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr3 | 57612271 | T | C | 0.00831 | DENND6A,PDE12 | +,- | FALSE | AluSp | SINE,Alu |
| chr2 | 85772406 | G | A | 0.00278 | GGCX | - | FALSE | ||
| chr5 | 149823795 | A | T | 0.00722 | RPS14 | - | FALSE | ||
| chr10 | 13234356 | A | T | 3.19668E-07 | MCM10 | + | FALSE | ||
| chr1 | 16889414 | T | C | 0.00679 | NBPF1 | - | TRUE | L1MC4 | SINE,Alu |
| chr2 | 87821033 | C | A | 0.00474 | . | FALSE | |||
| chr1 | 179041705 | A | T | 0.00068 | FAM20B | + | FALSE | ||
| chr2 | 24223256 | A | G | 0.00711 | UBXN2A | + | TRUE | AluSc | SINE,Alu |
| chr1 | 40213628 | A | G | 0.00058 | PPIE | + | TRUE | FRAM | SINE,Alu |
| chr15 | 41590287 | A | G | 0.00319 | OIP5-AS1 | + | FALSE | ||
| chr10 | 70742774 | A | T | 0.00504 | DDX21 | + | FALSE | ||
| chr17 | 26955330 | A | C | 0.00291 | KIAA0100 | - | FALSE | ||
| chrX | 24095066 | G | T | 0.00603 | EIF2S3 | + | FALSE | ||
| chr1 | 6582353 | T | C | 0.00415 | NOL9 | - | TRUE | AluSx1 | SINE,Alu |
| chr3 | 15113042 | C | T | 4.09809E-05 | RBSN | - | FALSE | ||
| chr1 | 150783955 | T | C | 0.00077 | ARNT | - | FALSE | (CA)n | SINE,Alu |
| chr1 | 242012149 | C | T | 0.00510 | EXO1 | + | FALSE | ||
| chr1 | 10518875 | T | C | 0.00127 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 230979247 | G | A | 0.00137 | C1orf198 | - | FALSE | ||
| chr1 | 27533879 | G | A | 0.00877 | . | FALSE | |||
| chr3 | 112319504 | T | C | 0.00040 | LINC01279 | - | TRUE | AluJb | SINE,Alu |
| chr1 | 116947126 | C | A | 4.37114E-09 | ATP1A1,ATP1A1-AS1 | +,- | FALSE | ||
| chr1 | 16577794 | C | T | 0.00805 | FBXO42 | - | FALSE | ||
| chr1 | 67874270 | G | A | 0.00019 | SERBP1 | - | FALSE | ||
| chr1 | 45975669 | A | G | 0.00695 | MMACHC | + | TRUE | AluSx4 | SINE,Alu |
| chr5 | 96366330 | G | C | 0.00251 | . | FALSE | (TG)n | SINE,Alu | |
| chr5 | 64016339 | C | T | 6.96791E-06 | SREK1IP1 | - | FALSE | ||
| chr1 | 179042555 | A | G | 0.00922 | FAM20B | + | TRUE | AluSx1 | SINE,Alu |
| chr5 | 176863519 | G | C | 0.00567 | GRK6 | + | FALSE | ||
| chr8 | 38829839 | A | G | 0.00184 | PLEKHA2 | + | TRUE | AluJr4 | SINE,Alu |
| chr2 | 38522138 | G | T | 0.00769 | ATL2 | - | FALSE | ||
| chrM | 8859 | G | A | 0.00929 | . | FALSE | |||
| chr1 | 117530217 | C | T | 0.00048 | PTGFRN | + | FALSE | ||
| chr1 | 41487492 | C | G | 0.00221 | SLFNL1-AS1 | + | FALSE | ||
| chr1 | 92941357 | A | G | 0.00296 | GFI1 | - | FALSE | ||
| chr1 | 31532379 | A | G | 0.00092 | PUM1 | - | FALSE | ||
| chr1 | 156692049 | A | T | 6.25184E-05 | ISG20L2 | - | FALSE | ||
| chr1 | 67874697 | T | C | 0.00642 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 1255412 | C | A | 0.00751 | CPSF3L | - | FALSE | (GCAGG)n | SINE,Alu |
| chr3 | 10192811 | A | G | 0.00149 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr2 | 208619461 | A | G | 2.24939E-05 | CCNYL1 | + | TRUE | FAM | SINE,Alu |
| chr1 | 16889138 | T | C | 0.00356 | NBPF1 | - | FALSE | L1MC4 | SINE,Alu |
| chr3 | 183900836 | G | A | 2.54977E-05 | AP2M1 | + | FALSE | ||
| chr19 | 39981168 | A | G | 0.00446 | TIMM50 | + | TRUE | AluJr | SINE,Alu |
| chr19 | 4428790 | A | T | 0.00000 | CHAF1A | + | FALSE | ||
| chr1 | 220231484 | T | C | 0.00046 | RNU5F-1,BPNT1 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 24288535 | A | T | 0.00271 | PNRC2 | + | FALSE | ||
| chr1 | 100316589 | A | G | 0.00147 | AGL | + | FALSE | ||
| chr1 | 33149373 | A | G | 0.00918 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr1 | 21545088 | T | C | 0.00737 | ECE1 | - | FALSE | AluSx1 | SINE,Alu |
| chr1 | 9161245 | T | C | 0.00429 | . | FALSE | AluSx | SINE,Alu | |
| chr8 | 30643547 | T | A | 0.00748 | PPP2CB | - | FALSE | ||
| chr2 | 114220055 | T | C | 9.23000E-05 | CBWD2 | + | FALSE | ||
| chr5 | 31553968 | T | C | 0.00555 | C5orf22 | + | FALSE | ||
| chr2 | 38522643 | G | T | 0.00285 | ATL2 | - | FALSE | ||
| chr1 | 19542693 | T | C | 0.00024 | LOC101927895,EMC1 | +,- | FALSE | FRAM | SINE,Alu |
| chr1 | 230416414 | T | G | 0.00360 | GALNT2 | + | FALSE | ||
| chr3 | 100084432 | G | A | 0.00321 | TOMM70 | - | FALSE | ||
| chr6 | 42045563 | A | G | 4.21139E-05 | TAF8 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 1337733 | A | C | 0.00017 | MRPL20 | - | FALSE | ||
| chr2 | 37330435 | T | C | 3.14905E-06 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 28824360 | A | G | 0.00971 | PHACTR4 | + | TRUE | AluSx3 | SINE,Alu |
| chr2 | 101893244 | C | A | 0.00332 | RNF149 | - | FALSE | (A)n | SINE,Alu |
| chr4 | 17629934 | T | C | 0.00178 | . | FALSE | MER90 | SINE,Alu | |
| chr1 | 145282799 | G | A | 0.00915 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 10517567 | T | C | 9.16527E-06 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 26887592 | T | C | 0.00354 | RPS6KA1 | + | FALSE | ||
| chr9 | 128729384 | G | C | 0.00059 | PBX3 | + | FALSE | ||
| chr2 | 172178540 | T | C | 0.00040 | METTL8 | - | TRUE | AluSx3 | SINE,Alu |
| chr3 | 40578933 | A | G | 0.00947 | ZNF621 | + | TRUE | AluJr | SINE,Alu |
| chr2 | 47703548 | G | A | 5.05442E-05 | MSH2 | + | FALSE | ||
| chr1 | 94335333 | G | T | 0.00258 | DNTTIP2 | - | FALSE | ||
| chr2 | 70316299 | C | A | 0.00650 | PCBP1 | + | FALSE | ||
| chr1 | 52520864 | A | T | 0.00041 | TXNDC12 | - | FALSE | ||
| chr1 | 145513098 | A | G | 0.00514 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluSz6 | SINE,Alu |
| chr3 | 10192744 | A | G | 3.36147E-05 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 204524400 | A | G | 0.00029 | MDM4 | + | TRUE | AluY | SINE,Alu |
| chr1 | 77165735 | A | G | 0.00227 | . | FALSE | |||
| chr3 | 40353799 | G | T | 0.00906 | EIF1B | + | FALSE | ||
| chr17 | 8378932 | A | G | 0.00372 | MYH10 | - | FALSE | ||
| chr12 | 125512494 | A | G | 0.00427 | . | FALSE | AluY | SINE,Alu | |
| chr1 | 9643873 | A | G | 0.00064 | . | FALSE | AluY | SINE,Alu | |
| chr3 | 14986399 | T | C | 1.19850E-05 | FGD5-AS1 | - | TRUE | AluSq2 | SINE,Alu |
| chr1 | 33150598 | T | C | 4.12722E-05 | SYNC,RBBP4 | +,- | FALSE | ||
| chr6 | 42856954 | A | G | 0.00037 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 203713133 | G | A | 0.00984 | ATP2B4 | + | FALSE | ||
| chr1 | 145116149 | T | A | 0.00585 | NBPF20,SEC22B | + | FALSE | ||
| chr7 | 36447345 | A | T | 0.00553 | ANLN | + | FALSE | ||
| chr1 | 20224152 | G | A | 0.00581 | OTUD3 | + | FALSE | ||
| chr15 | 40955103 | A | G | 0.00372 | . | FALSE | AluJb | SINE,Alu | |
| chr4 | 57327092 | A | G | 0.00091 | PAICS | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 28836975 | A | G | 0.00782 | SNHG3,RCC1 | + | TRUE | AluSc | SINE,Alu |
| chr10 | 71647223 | A | C | 0.00114 | COL13A1 | + | FALSE | ||
| chr1 | 1650832 | A | G | 0.00407 | CDK11B,CDK11A | - | FALSE | ||
| chr1 | 244572645 | T | G | 0.00218 | ADSS | - | FALSE | ||
| chr14 | 20923558 | A | C | 0.00373 | APEX1 | + | FALSE | ||
| chr2 | 37327670 | T | C | 5.08697E-08 | . | FALSE | |||
| chr1 | 38279666 | C | T | 0.00521 | MTF1 | - | FALSE | (T)n | SINE,Alu |
| chr7 | 4810530 | G | A | 0.00236 | FOXK1 | + | FALSE | (GT)n | SINE,Alu |
| chr11 | 94863483 | C | T | 0.00501 | ENDOD1 | + | FALSE | ||
| chr2 | 3609064 | G | A | 0.00212 | RNASEH1-AS1 | + | FALSE | MER33 | SINE,Alu |
| chr1 | 26856462 | T | G | 0.00201 | RPS6KA1 | + | FALSE | ||
| chr3 | 88104072 | T | A | 0.00815 | CGGBP1 | - | FALSE | ||
| chr1 | 16945409 | T | A | 0.00105 | CROCCP2 | - | FALSE | ||
| chr3 | 99515750 | A | G | 2.61553E-11 | MIR548G | - | FALSE | ||
| chr1 | 16912099 | G | C | 0.00928 | NBPF1 | - | FALSE | ||
| chr1 | 16933650 | A | G | 0.00258 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr1 | 6259658 | G | C | 0.00012 | RPL22 | - | FALSE | ||
| chr1 | 145512014 | A | G | 0.00023 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 150199123 | G | T | 0.00625 | ANP32E | - | FALSE | ||
| chr2 | 37431521 | A | G | 0.00783 | CEBPZOS,CEBPZ | +,- | FALSE | AluSc | SINE,Alu |
| chr1 | 28661767 | A | G | 0.00242 | MED18 | + | TRUE | AluSg | SINE,Alu |
| chr2 | 86850798 | A | G | 0.00267 | RNF103-CHMP3,RNF103 | - | FALSE | ||
| chr1 | 118502757 | G | A | 0.00793 | WDR3,SPAG17 | +,- | FALSE | (GT)n | SINE,Alu |
| chr1 | 6282237 | T | C | 0.00771 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr1 | 16112795 | A | G | 0.00106 | FBLIM1 | + | FALSE | ||
| chr1 | 94342564 | C | A | 0.00098 | DNTTIP2 | - | FALSE | ||
| chr1 | 6582701 | T | C | 1.54245E-05 | NOL9 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 97543764 | C | T | 0.00353 | DPYD | - | FALSE | ||
| chr3 | 196670082 | A | T | 0.00261 | NCBP2-AS2 | + | FALSE | ||
| chr1 | 11982544 | T | C | 4.37710E-05 | KIAA2013 | - | FALSE | ||
| chr1 | 207942427 | A | G | 0.00822 | CD46 | + | TRUE | AluSg4 | SINE,Alu |
| chr2 | 37331025 | T | C | 0.00029 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 224573601 | C | T | 0.00587 | WDR26 | - | FALSE | ||
| chr2 | 217366194 | C | A | 0.00359 | . | FALSE | |||
| chr3 | 17202334 | A | C | 0.00770 | TBC1D5 | - | FALSE | ||
| chr1 | 10519947 | T | C | 0.00534 | . | FALSE | AluJr | SINE,Alu | |
| chr5 | 61683960 | A | G | 0.00491 | . | FALSE | |||
| chr3 | 88191456 | C | A | 0.00694 | CGGBP1,ZNF654 | +,- | FALSE | ||
| chr1 | 145689611 | C | A | 0.00104 | NBPF20,NBPF10 | + | FALSE | AluSg | SINE,Alu |
| chr14 | 70838324 | T | C | 0.00011 | SYNJ2BP-COX16,SYNJ2BP | - | TRUE | AluSg | SINE,Alu |
| chr1 | 52253793 | C | T | 0.00966 | OSBPL9 | + | FALSE | ||
| chr3 | 196557357 | G | T | 0.00615 | PAK2 | + | FALSE | ||
| chr1 | 16889004 | C | T | 0.00878 | NBPF1 | - | FALSE | ||
| chr1 | 193054485 | T | C | 0.00439 | TROVE2 | + | FALSE | ||
| chr1 | 89518120 | A | G | 0.00453 | GBP1 | - | FALSE | ||
| chr2 | 67630980 | G | A | 0.00225 | ETAA1 | + | FALSE | ||
| chr8 | 146280802 | C | T | 0.00492 | C8orf33 | + | FALSE | LTR13 | SINE,Alu |
| chr4 | 160280309 | G | T | 0.00770 | RAPGEF2 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 6282298 | T | C | 2.81673E-05 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr7 | 20177519 | T | C | 0.00885 | MACC1,LOC101927668 | - | TRUE | AluSx | SINE,Alu |
| chr2 | 201842323 | T | C | 0.00390 | FAM126B | - | TRUE | AluJb | SINE,Alu |
| chr1 | 76227022 | A | G | 0.00035 | ACADM | + | FALSE | ||
| chr8 | 30536143 | T | C | 0.00883 | GSR | - | TRUE | AluJr | SINE,Alu |
| chr1 | 21793735 | C | G | 0.00405 | NBPF3 | + | FALSE | ||
| chr3 | 10192747 | A | G | 0.00065 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr5 | 40835311 | A | T | 0.00632 | RPL37 | - | FALSE | ||
| chr5 | 14397238 | T | C | 0.00552 | TRIO | + | FALSE | ||
| chr1 | 40435513 | C | A | 0.00656 | MFSD2A | + | FALSE | ||
| chr3 | 72426071 | T | A | 0.00169 | RYBP | - | FALSE | (T)n | SINE,Alu |
| chr12 | 133298428 | A | G | 7.41792E-11 | PGAM5 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 144930940 | T | C | 0.00181 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr17 | 76117147 | G | A | 0.00606 | TMC6 | - | FALSE | ||
| chr2 | 203430456 | T | G | 0.00162 | BMPR2 | + | FALSE | ||
| chr10 | 79800443 | A | G | 0.00971 | RPS24 | + | FALSE | ||
| chr1 | 144917841 | T | C | 4.47769E-05 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 16892918 | T | C | 0.00590 | NBPF1 | - | FALSE | ||
| chr1 | 237064432 | C | G | 0.00019 | MTR | + | FALSE | ||
| chr1 | 10521238 | T | C | 0.00793 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr1 | 245008386 | G | C | 0.00041 | . | FALSE | MER2 | SINE,Alu | |
| chr1 | 24296874 | G | A | 0.00627 | . | FALSE | AluSg | SINE,Alu | |
| chr1 | 9328120 | A | G | 1.75282E-05 | H6PD | + | TRUE | AluJr | SINE,Alu |
| chr1 | 120163248 | G | A | 4.97770E-06 | ZNF697 | - | FALSE | ||
| chr5 | 442075 | C | A | 0.00962 | EXOC3-AS1 | - | FALSE | ||
| chr1 | 206579798 | T | C | 0.00476 | SRGAP2 | + | FALSE | ||
| chr4 | 39550564 | T | C | 0.00996 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr12 | 49075983 | C | G | 0.00321 | KANSL2 | - | FALSE | ||
| chr2 | 55516940 | A | C | 0.00389 | CCDC88A | - | FALSE | (GA)n | SINE,Alu |
| chr1 | 45280500 | A | G | 0.00857 | . | FALSE | AluSx | SINE,Alu | |
| chr2 | 110842200 | C | A | 0.00131 | MALL | - | FALSE | ||
| chr6 | 108364582 | T | C | 0.00577 | OSTM1 | - | FALSE | ||
| chr1 | 46828700 | A | G | 0.00095 | NSUN4 | + | FALSE | ||
| chr6 | 160526548 | C | A | 0.00086 | IGF2R | + | FALSE | ||
| chr2 | 239360542 | C | A | 0.00989 | ASB1 | + | FALSE | ||
| chr6 | 52868087 | T | C | 0.00594 | ICK | - | TRUE | MER135 | SINE,Alu |
| chr17 | 61502463 | T | G | 0.00370 | TANC2 | + | FALSE | ||
| chr1 | 67874854 | T | C | 0.00358 | SERBP1 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 68624878 | C | T | 0.00465 | GNG12-AS1,WLS | +,- | FALSE | ||
| chr3 | 99463810 | G | T | 0.00496 | MIR548G,COL8A1 | +,- | FALSE | ||
| chr7 | 79848333 | T | G | 0.00322 | GNAI1 | + | FALSE | ||
| chr7 | 100031498 | T | C | 0.00110 | MEPCE | + | FALSE | ||
| chr1 | 38326547 | C | T | 0.00212 | INPP5B | - | FALSE | AluJr | SINE,Alu |
| chr1 | 211921702 | T | C | 1.94235E-05 | LPGAT1 | - | FALSE | ||
| chr12 | 93192784 | C | T | 0.00423 | EEA1 | - | FALSE | ||
| chr9 | 116139063 | G | C | 0.00321 | HDHD3 | - | FALSE | ||
| chr1 | 10517513 | T | C | 0.00982 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 2333763 | G | A | 0.00867 | RER1 | + | FALSE | ||
| chr14 | 75202512 | A | G | 0.00053 | FCF1 | + | TRUE | AluSc | SINE,Alu |
| chr3 | 44791320 | T | C | 0.00059 | KIAA1143 | - | TRUE | AluJr | SINE,Alu |
| chr2 | 201774341 | T | C | 0.00010 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 16927379 | T | A | 0.00864 | NBPF1 | - | FALSE | ||
| chr6 | 31132911 | C | T | 0.00000 | . | FALSE | |||
| chr3 | 18427924 | G | T | 0.00312 | SATB1 | - | FALSE | ||
| chr17 | 42876398 | T | C | 0.00697 | GJC1 | - | FALSE | AluSz6 | SINE,Alu |
| chr5 | 149363218 | A | G | 0.00233 | SLC26A2 | + | TRUE | AluJr | SINE,Alu |
| chr1 | 16889820 | C | T | 0.00012 | NBPF1 | - | FALSE | ||
| chr12 | 90914 | C | T | 0.00539 | LOC100288778 | + | FALSE | ||
| chr17 | 57279234 | A | G | 0.00293 | PRR11 | + | TRUE | AluSq2 | SINE,Alu |
| chr2 | 37331134 | T | C | 0.00042 | . | FALSE | AluSx1 | SINE,Alu | |
| chr7 | 6501820 | A | T | 0.00531 | KDELR2 | - | FALSE | ||
| chr1 | 214524044 | T | C | 0.00242 | PTPN14 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 36067925 | T | C | 0.00397 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 201846630 | C | A | 0.00212 | IPO9 | + | FALSE | (CA)n | SINE,Alu |
| chr3 | 172365720 | C | T | 3.67728E-06 | NCEH1 | - | FALSE | ||
| chr1 | 36388202 | T | G | 0.00707 | AGO1 | + | FALSE | (GCCT)n | SINE,Alu |
| chr15 | 44751350 | C | T | 0.00260 | CTDSPL2 | + | FALSE | ||
| chr1 | 120163248 | G | A | 0.00711 | ZNF697 | - | FALSE | ||
| chr1 | 109817245 | C | T | 2.70011E-05 | CELSR2 | + | FALSE | ||
| chr11 | 68522907 | T | C | 0.00828 | CPT1A | - | TRUE | AluY | SINE,Alu |
| chr4 | 187647832 | C | G | 0.00592 | . | FALSE | |||
| chr1 | 120611964 | G | C | 0.00077 | NOTCH2 | - | FALSE | ||
| chr2 | 183643241 | C | A | 0.00108 | DNAJC10 | + | FALSE | ||
| chr7 | 22984967 | A | G | 0.00108 | FAM126A | - | FALSE | ||
| chr1 | 9163290 | T | C | 0.00016 | . | FALSE | AluSp | SINE,Alu | |
| chr1 | 41088377 | C | T | 8.47840E-10 | RIMS3 | - | FALSE | ||
| chr3 | 10192596 | A | G | 7.92003E-05 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr15 | 43767774 | G | C | 0.00057 | TP53BP1 | - | FALSE | ||
| chr1 | 54692358 | G | A | 0.00195 | SSBP3 | - | FALSE | ||
| chr4 | 9909923 | G | A | 0.00416 | SLC2A9 | - | FALSE | ||
| chr1 | 19543456 | T | C | 3.77297E-05 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr19 | 46214293 | C | T | 0.00137 | FBXO46 | - | FALSE | ||
| chr2 | 206981796 | T | C | 0.00137 | . | FALSE | AluJb | SINE,Alu | |
| chr14 | 70838268 | T | C | 0.00365 | SYNJ2BP-COX16,SYNJ2BP | - | TRUE | AluSg | SINE,Alu |
| chr1 | 31837516 | G | C | 5.10721E-05 | ZCCHC17 | + | FALSE | ||
| chr4 | 53732381 | C | T | 0.00433 | RASL11B | + | FALSE | (TTTCTTT)n | SINE,Alu |
| chr1 | 203766872 | G | A | 1.42518E-06 | ZC3H11A,ZBED6 | + | FALSE | ||
| chr14 | 70838264 | T | C | 0.00059 | SYNJ2BP-COX16,SYNJ2BP | - | TRUE | AluSg | SINE,Alu |
| chr5 | 122165512 | C | A | 0.00276 | SNX2 | + | FALSE | ||
| chr21 | 37789499 | A | G | 0.00889 | . | FALSE | AluJb | SINE,Alu | |
| chr3 | 58112440 | A | G | 8.00661E-07 | FLNB | + | FALSE | ||
| chr15 | 33064742 | C | G | 0.00215 | FMN1 | - | FALSE | ||
| chr1 | 148932848 | A | G | 0.00715 | LOC645166 | + | FALSE | ||
| chr3 | 24019987 | A | C | 0.00563 | NR1D2 | + | FALSE | ||
| chr1 | 150208462 | A | C | 9.89925E-05 | ANP32E | - | FALSE | ||
| chr14 | 67852067 | A | G | 2.77652E-05 | EIF2S1 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 100731820 | G | A | 0.00771 | RTCA | + | FALSE | ||
| chr1 | 109818160 | T | G | 0.00745 | CELSR2 | + | FALSE | ||
| chr1 | 145281543 | C | T | 0.00031 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 1594977 | T | C | 0.00487 | CDK11B,SLC35E2B | - | TRUE | AluSg | SINE,Alu |
| chr1 | 24798068 | C | A | 0.00381 | NIPAL3 | + | FALSE | AluJr | SINE,Alu |
| chr1 | 145689566 | A | G | 0.00331 | NBPF20,NBPF10 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 143399338 | G | A | 0.00966 | . | FALSE | L1MC4 | SINE,Alu | |
| chr1 | 11190646 | G | A | 0.00644 | MTOR | - | FALSE | ||
| chr1 | 54412181 | T | C | 0.00524 | LRRC42 | + | FALSE | ||
| chr1 | 42693597 | A | G | 0.00106 | FOXJ3 | - | FALSE | ||
| chr3 | 172115476 | A | G | 0.00892 | FNDC3B | + | FALSE | (A)n | SINE,Alu |
| chr1 | 16927039 | C | T | 0.00040 | NBPF1 | - | FALSE | ||
| chr2 | 55459820 | C | T | 0.00714 | RPS27A | + | FALSE | ||
| chr1 | 67874689 | T | C | 0.00896 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr15 | 31231255 | A | G | 0.00027 | FAN1,MTMR10 | +,- | FALSE | ||
| chr1 | 27202812 | T | C | 0.00353 | . | FALSE | AluSq2 | SINE,Alu | |
| chr19 | 18477337 | A | G | 0.00085 | PGPEP1 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 144595935 | G | A | 0.00837 | NBPF20 | + | FALSE | AluJb | SINE,Alu |
| chr1 | 100490067 | A | G | 0.00267 | SLC35A3 | + | TRUE | AluSg | SINE,Alu |
| chr12 | 133298355 | A | G | 0.00024 | PGAM5 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 179829425 | T | C | 1.55944E-05 | TOR1AIP2 | - | TRUE | AluJr | SINE,Alu |
| chr3 | 45960578 | G | A | 0.00632 | FYCO1 | - | FALSE | ||
| chr1 | 26138325 | G | A | 0.00245 | SEPN1 | + | FALSE | ||
| chr16 | 10623558 | T | C | 0.00103 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr3 | 155660833 | A | G | 0.00020 | . | FALSE | AluSz | SINE,Alu | |
| chr11 | 125525572 | A | C | 0.00016 | CHEK1 | + | FALSE | ||
| chr1 | 118071289 | A | G | 0.00023 | . | FALSE | |||
| chr1 | 3654747 | C | A | 0.00691 | TP73-AS1 | - | FALSE | ||
| chr8 | 12283473 | C | T | 0.00582 | FAM86B2 | - | FALSE |