RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	144931330	C	T	0.00194	NBPF20,PDE4DIP	+,-	FALSE
chr1	148556726	G	T	0.00976		.	FALSE
chr3	182637840	C	T	1.61172E-05	ATP11B	+	FALSE
chr7	197428	G	A	3.11254E-09	FAM20C	+	FALSE
chr1	33148362	A	T	0.00870	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	33066859	A	G	0.00403	ZBTB8A	+	TRUE	AluSq4	SINE,Alu
chr19	39220786	C	A	0.00303	ACTN4	+	FALSE	A-rich	SINE,Alu
chr1	104097685	C	T	0.00028	RNPC3,AMY2B	+	FALSE
chr1	16959698	G	A	0.00086		.	FALSE
chr1	161088583	T	G	0.00822	NIT1	+	FALSE
chr1	85785548	C	T	0.00353	DDAH1	-	FALSE
chr1	211918115	C	T	0.00979	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr1	16933135	G	T	0.00937	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	38326643	T	C	0.00458	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	46269545	G	A	0.00378	MAST2	+	FALSE
chr1	6583592	T	C	0.00939	NOL9	-	TRUE	AluSq	SINE,Alu
chr7	128142691	A	G	0.00017	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr1	28662199	A	G	0.00138	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr4	17803681	T	C	3.85233E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	16891340	T	A	0.00229	NBPF1	-	FALSE
chr1	100388748	T	C	0.00445	AGL	+	FALSE
chr3	72426059	T	A	0.00417	RYBP	-	FALSE
chr8	27661035	T	A	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr19	41097276	C	G	0.00188	SHKBP1	+	FALSE
chr8	12286573	G	A	0.00052	FAM86B2	-	FALSE
chr9	19373161	A	G	0.00647	DENND4C	+	TRUE	MADE1	SINE,Alu
chr5	68936027	G	A	0.00868		.	FALSE
chr3	141879040	T	C	0.00101	GK5	-	TRUE	FLAM_C	SINE,Alu
chr1	44415424	A	G	0.00213	IPO13	+	FALSE
chr10	117823569	G	A	0.00391	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr17	42876808	T	C	0.00147	GJC1	-	TRUE	AluSz6	SINE,Alu
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr1	10042955	A	G	0.00131	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr1	36068275	T	C	0.00098	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	1498747	T	C	0.00847	SSU72	-	TRUE	AluSg7	SINE,Alu
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr5	43377390	T	C	0.00062	CCL28	-	TRUE	AluSz	SINE,Alu
chr1	9162932	A	T	0.00635		.	FALSE
chr1	112170157	C	G	0.00335	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr3	56763316	G	A	0.00830	ARHGEF3	-	FALSE
chr1	109535128	G	A	0.00063	WDR47	-	FALSE
chr5	180001389	G	A	0.00138	CNOT6	+	FALSE
chr1	54637167	T	C	0.00027		.	FALSE
chr2	206987725	T	C	0.00625		.	FALSE	AluJb	SINE,Alu
chr1	76255228	G	A	0.00073	RABGGTB,SNORD45B	+	FALSE
chr19	39981168	A	G	0.00446	TIMM50	+	TRUE	AluJr	SINE,Alu
chr1	145689271	A	G	0.00250	NBPF20,NBPF10	+	FALSE
chr17	78294253	A	G	0.00031	RNF213	+	TRUE	AluSp	SINE,Alu
chr16	88789703	C	G	0.00498	PIEZO1	-	FALSE
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr1	224380757	A	G	0.00618	DEGS1	+	FALSE	AluSx	SINE,Alu
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr2	120980896	T	G	0.00132	TMEM185B	-	FALSE
chr9	136209397	G	C	0.00709	MED22	-	FALSE
chr1	36770621	G	T	0.00424	THRAP3	+	FALSE	(T)n	SINE,Alu
chr3	14528004	T	C	0.00091	SLC6A6	+	FALSE
chr1	207943385	A	G	0.00751	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	16890639	C	T	8.47214E-05	NBPF1	-	FALSE
chr1	53289860	A	G	0.00119	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr19	19792345	A	G	0.00272	ZNF101	+	TRUE	AluJb	SINE,Alu
chr2	86731654	G	A	0.00931	CHMP3,RNF103-CHMP3	-	FALSE	AluJr	SINE,Alu
chr1	16842064	A	C	0.00079		.	FALSE	MER41E	SINE,Alu
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	1251631	T	C	0.00256	CPSF3L	-	TRUE	AluSz	SINE,Alu
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr4	53732381	C	T	0.00433	RASL11B	+	FALSE	(TTTCTTT)n	SINE,Alu
chr10	73994158	A	G	0.00110	ANAPC16	+	TRUE	AluJr	SINE,Alu
chr3	180694862	C	T	0.00638	FXR1	+	FALSE	(T)n	SINE,Alu
chr1	220231959	T	C	0.00464	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	155695998	A	G	0.00574	DAP3	+	TRUE	AluSp	SINE,Alu
chr19	42376711	A	G	0.00223		.	FALSE	AluSp	SINE,Alu
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	22400707	C	G	0.00232	CDC42	+	FALSE	AluSc8	SINE,Alu
chr4	42089177	G	A	0.00447	SLC30A9	+	FALSE
chr4	71682341	T	C	0.00584	GRSF1	-	TRUE	AluSz6	SINE,Alu
chr17	58156064	G	A	9.79781E-05	HEATR6	-	FALSE
chr1	64125439	A	C	3.63698E-07	PGM1	+	FALSE
chr16	87864349	C	A	0.00981	SLC7A5	-	FALSE
chr1	32661615	A	T	0.00225	TXLNA	+	FALSE
chr2	101638888	A	G	0.00127	TBC1D8	-	FALSE
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr5	157185192	A	G	0.00835	LSM11	+	TRUE	AluSq	SINE,Alu
chr4	120979673	T	C	0.00074		.	FALSE	AluSg	SINE,Alu
chr4	57326313	A	G	0.00132	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	172115474	A	G	0.00012	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr4	17804785	T	C	0.00083	DCAF16	-	TRUE	AluSx	SINE,Alu
chr16	89627988	G	T	5.83717E-06	RPL13	+	FALSE
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr9	131872852	G	C	0.00064	CRAT	-	FALSE
chr3	15483019	G	T	0.00751	EAF1	+	FALSE
chr12	1085978	T	A	0.00421	RAD52	-	FALSE	L2	SINE,Alu
chr1	75171751	T	C	0.00161	CRYZ	-	FALSE
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr1	114443574	A	G	0.00162	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	24022910	G	A	0.00036	RPL11	+	FALSE
chr1	3545198	T	C	0.00013	TPRG1L	+	FALSE
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chr5	68463014	G	T	0.00011	CCNB1	+	FALSE
chr2	128060859	T	A	0.00016	MAP3K2	-	FALSE
chr6	33281842	G	T	0.00514		.	FALSE
chr3	62282907	C	T	9.50704E-05	PTPRG-AS1	-	FALSE
chr19	3540006	T	C	3.25622E-05	C19orf71	+	FALSE	AluJo	SINE,Alu
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr1	45976723	T	C	5.68535E-05	MMACHC,PRDX1	+,-	FALSE
chr1	16921146	T	C	0.00835	NBPF1	-	FALSE
chr2	3605906	C	A	0.00982	RNASEH1	-	FALSE
chr11	65544342	T	C	3.74920E-05	AP5B1	-	TRUE	AluJb	SINE,Alu
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr1	10520751	T	C	0.00495	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	27763674	T	G	0.00617	EOMES	-	FALSE
chr3	179117280	T	C	0.00624	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	179829505	T	C	0.00592	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	53289873	A	G	0.00013	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr6	3266908	G	A	0.00974	PSMG4	+	FALSE
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr14	53243434	T	C	0.00421	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr2	174090321	C	A	0.00563	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr2	202030311	T	A	0.00732	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	36642420	T	C	0.00358	MAP7D1	+	FALSE
chr12	27848053	A	T	0.00090	PPFIBP1	+	FALSE
chr3	176742501	G	A	0.00707	TBL1XR1	-	FALSE	(A)n	SINE,Alu
chr1	28939803	C	T	1.99823E-11	TAF12	-	FALSE
chr1	10518756	T	C	0.00600		.	FALSE	AluSx1	SINE,Alu
chr12	125512218	A	G	0.00392		.	FALSE	AluSx1	SINE,Alu
chr3	10192798	A	G	0.00722	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	3545184	G	T	0.00347	TPRG1L	+	FALSE
chr1	38326661	T	C	0.00023	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr2	121749583	T	C	0.00120	GLI2	+	FALSE
chr1	229439639	T	A	0.00276	RAB4A	+	FALSE
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr4	17803604	T	C	0.00414	DCAF16	-	TRUE	AluY	SINE,Alu
chr17	67538540	T	C	0.00295		.	FALSE
chr1	36068237	T	C	0.00075	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	9815354	T	G	0.00212	CLSTN1	-	FALSE
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr1	10519048	T	C	0.00728		.	FALSE	AluSx3	SINE,Alu
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr1	28836900	A	G	0.00018	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr5	41917696	T	A	0.00045	C5orf51	+	FALSE
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr2	112874290	A	T	0.00455	TMEM87B	+	FALSE
chr7	137561078	G	A	0.00558	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr1	1344893	A	G	7.94078E-08		.	FALSE	AluSg	SINE,Alu
chr1	33149496	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr10	1086810	T	A	0.00245	IDI2-AS1,IDI1	+,-	FALSE
chr1	25570692	C	T	0.00095	RSRP1	-	FALSE
chr5	14510067	G	T	0.00130	TRIO	+	FALSE
chrX	152916235	G	A	0.00015	DUSP9	+	FALSE
chr1	77759578	A	G	0.00492	AK5	+	FALSE
chr15	74319733	A	G	0.00524	PML	+	TRUE	AluJr	SINE,Alu
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr2	24225006	A	G	0.00277		.	FALSE	AluSx	SINE,Alu
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	3545185	C	A	0.00347	TPRG1L	+	FALSE
chr1	93827995	C	T	0.00714	DR1	+	FALSE
chr4	2940147	T	C	0.00036	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	100654765	T	C	0.00254	DBT	-	TRUE	AluSz	SINE,Alu
chr1	23409538	G	A	0.00464	KDM1A	+	FALSE
chr1	206566195	C	T	0.00462	SRGAP2	+	FALSE
chr1	200558363	T	C	1.35174E-05	KIF14	-	FALSE
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr11	62299945	A	C	0.00314	AHNAK	-	FALSE
chr1	180991776	C	A	0.00664	STX6	-	FALSE
chr3	195965115	A	T	0.00098	PCYT1A	-	FALSE
chr1	33087433	C	T	0.00687	ZBTB8OS	-	FALSE
chr3	172117458	A	C	0.00011	FNDC3B	+	FALSE
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr1	155161737	G	C	0.00482	MUC1	-	FALSE
chr6	42857179	C	A	0.00492	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr5	180262080	A	G	0.00259	LINC00847	+	TRUE	MLT2B3	SINE,Alu
chr1	10521238	T	C	0.00793	DFFA	-	TRUE	AluY	SINE,Alu
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr3	50150389	A	G	0.00046	RBM5	+	TRUE	AluSx	SINE,Alu
chr1	145513125	A	G	0.00274	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr17	3512398	T	C	0.00709	SHPK,TRPV1	-	TRUE	AluSx	SINE,Alu
chr8	145159713	G	C	0.00137	MAF1	+	FALSE
chr6	27327349	C	G	0.00359	ZNF204P	-	FALSE
chr1	15992470	G	A	0.00605		.	FALSE
chr1	144931330	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr2	174090320	T	A	0.00174	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr1	567557	A	G	0.00649		.	FALSE
chr12	27953264	A	T	0.00688	KLHL42	+	FALSE
chr1	110170896	T	C	5.12229E-06	AMPD2	+	FALSE
chr1	244572643	C	A	0.00681	ADSS	-	FALSE
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr1	79126336	C	G	1.94494E-06	IFI44	+	FALSE
chr1	121133998	T	A	0.00171	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	45975266	A	G	0.00188	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	20648140	A	C	6.93182E-06	RHOB	+	FALSE
chr2	128952006	A	G	0.00076	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE
chr1	204524357	A	G	0.00568	MDM4	+	TRUE	AluY	SINE,Alu
chr1	36068281	T	C	0.00026	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	89237556	C	T	0.00840	PKN2	+	FALSE
chr4	128756738	A	G	0.00408		.	FALSE	AluSx	SINE,Alu
chr1	20978457	T	C	0.00036	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr2	201774264	T	C	0.00099		.	FALSE	AluSz	SINE,Alu
chr1	29095757	G	T	0.00739	YTHDF2	+	FALSE
chr1	77166017	G	A	0.00146		.	FALSE
chr1	28836048	G	A	0.00035	SNHG3,RCC1	+	FALSE	AluSx4	SINE,Alu
chr1	109475635	T	C	0.00458	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	10520331	C	T	0.00043		.	FALSE	AluSx1	SINE,Alu
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr6	114181223	A	G	0.00365	MARCKS	+	FALSE
chr5	149781426	A	G	0.00977	CD74	-	FALSE
chr1	10520888	C	T	0.00960	DFFA	-	FALSE
chr1	19586501	A	G	0.00055	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	87379498	T	G	0.00784	SEP15	-	FALSE
chr1	145281408	C	T	9.69497E-05	NBPF20,NOTCH2NL	+	FALSE
chr7	29961659	C	G	7.23387E-07	SCRN1	-	FALSE
chr14	75202856	A	G	3.12821E-09	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	171558516	C	T	4.87297E-05	PRRC2C	+	FALSE
chr1	109181308	T	A	0.00756	FAM102B	+	FALSE
chr5	170837890	C	A	0.00030		.	FALSE
chr1	120164552	G	A	0.00023	ZNF697	-	FALSE
chr1	109816293	G	C	0.00759	CELSR2	+	FALSE
chr10	70277096	T	C	0.00229	SLC25A16	-	FALSE	L2c	SINE,Alu
chr7	66038472	G	A	0.00964	GS1-124K5.11	-	FALSE
chr9	137330713	T	G	0.00021	RXRA	+	FALSE
chr1	16933110	T	C	0.00821	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	16935130	C	T	0.00288	NBPF1	-	FALSE
chr3	10192816	A	G	0.00010	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	69746296	C	T	0.00620	AAK1	-	FALSE
chr2	128620437	T	A	0.00388	AMMECR1L	-	FALSE
chrX	77084017	T	C	0.00179	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	10421878	A	G	7.26627E-05	KIF1B	+	FALSE
chr1	1252662	T	C	0.00136	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr3	141879765	T	C	0.00212	GK5	-	TRUE	AluJr	SINE,Alu
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	211921723	A	G	4.36683E-06	LPGAT1	-	FALSE
chr4	1305799	C	T	0.00730	MAEA	+	FALSE
chr19	33470874	A	G	0.00119	RHPN2	-	FALSE
chr1	20976078	T	C	0.00064	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	26755494	A	G	0.00874	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	32641383	C	A	0.00112	KPNA6	+	FALSE	AluSx3	SINE,Alu
chr4	169911126	C	A	0.00122	CBR4	-	FALSE
chr3	33038222	A	T	0.00379	GLB1	-	FALSE
chr2	3607238	C	T	0.00222	RNASEH1-AS1	+	FALSE
chr1	15993514	C	T	6.34808E-08		.	FALSE	AluSx4	SINE,Alu
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chr1	156613632	G	A	0.00187	BCAN	+	FALSE
chr1	206581246	T	C	0.00210	SRGAP2	+	FALSE
chr1	160967854	T	C	0.00150	F11R	-	TRUE	AluSp	SINE,Alu
chr3	141668922	T	C	0.00937	TFDP2	-	TRUE	AluSz	SINE,Alu
chr1	53289686	A	G	0.00460	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	46093161	C	T	0.00628	GPBP1L1	-	FALSE
chr12	54745612	A	G	0.00070	COPZ1	+	FALSE
chr1	179843725	T	C	0.00028	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr1	26901090	C	T	0.00952	RPS6KA1	+	FALSE
chr1	218617066	A	T	0.00211	TGFB2-OT1,TGFB2	+	FALSE
chr2	232319615	A	T	8.19218E-06	NCL	-	FALSE
chr13	39598616	G	A	2.18804E-06	PROSER1	-	FALSE
chr21	46353985	A	G	0.00985	LINC01547	-	FALSE	MER5A	SINE,Alu
chr1	9329289	C	T	0.00303	H6PD	+	FALSE
chrX	123045381	A	G	0.00893	XIAP	+	TRUE	AluJo	SINE,Alu
chr2	37431639	T	C	0.00160	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	16160968	C	T	0.00524	FLJ37453	-	FALSE	(T)n	SINE,Alu
chr9	102977295	C	T	3.70755E-05	INVS	+	FALSE	HERVL40-int	SINE,Alu
chr1	145311900	C	T	0.00011	NBPF20,NBPF10	+	FALSE
chr1	179042616	A	G	1.60543E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	201774244	T	C	0.00332		.	FALSE	AluSz	SINE,Alu
chr6	43582895	A	G	0.00983	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	16933642	G	A	0.00679	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr2	24223142	A	G	0.00524	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	92975262	C	A	0.00238	EVI5	-	FALSE
chr17	421034	T	C	0.00998	VPS53	-	TRUE	AluSx1	SINE,Alu
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr18	24127008	T	G	0.00800	KCTD1	-	FALSE	(TGG)n	SINE,Alu
chr4	165998149	T	C	0.00057	TMEM192	-	TRUE	AluSx	SINE,Alu
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr3	98518156	T	A	7.17121E-05	DCBLD2	-	FALSE
chr19	11256703	T	C	2.95254E-05	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	146650289	C	T	0.00736	PDIA3P1	+	FALSE
chr1	179042482	A	G	0.00301	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr1	28920823	A	G	0.00850	RAB42	+	FALSE	AluSx	SINE,Alu
chr5	151041876	G	T	5.29152E-05	SPARC	-	FALSE
chr1	220231959	T	C	1.45735E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	17998	C	T	0.00194	WASH7P	-	FALSE
chr1	33149414	A	G	5.81443E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	196670094	G	C	5.91401E-08	NCBP2-AS2	+	FALSE
chr7	6501828	C	A	0.00114	KDELR2	-	FALSE
chr7	128607384	G	A	0.00925	TNPO3	-	FALSE
chr20	25427856	A	G	0.00094	GINS1	+	FALSE	AluSz	SINE,Alu
chr1	6160958	A	G	0.00967	KCNAB2	+	FALSE
chr1	6282400	T	C	0.00809	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	160967833	T	C	0.00717	F11R	-	TRUE	AluSp	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr16	75479470	T	C	3.73920E-07	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr12	56510559	A	G	0.00137	RPL41	+	FALSE
chr1	1246978	A	T	0.00760	PUSL1,CPSF3L	+,-	FALSE
chr4	7761211	C	T	8.70555E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	155851620	A	G	6.99218E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr2	183642652	G	A	0.00309	DNAJC10	+	FALSE
chr1	53288924	A	G	0.00099	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr7	29961437	T	G	6.91541E-06	SCRN1	-	FALSE
chr12	12967264	C	G	0.00781	DDX47	+	FALSE
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr5	139876355	G	A	0.00815	ANKHD1,ANKHD1-EIF4EBP3	+	FALSE	GA-rich	SINE,Alu
chr3	45960556	C	T	0.00500	FYCO1	-	FALSE
chr11	769459	T	C	0.00082	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr1	226333558	A	C	0.00722	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	55316322	A	G	0.00172	DHCR24	-	FALSE
chr1	1419888	A	G	0.00630	ATAD3B	+	TRUE	AluSp	SINE,Alu
chr1	212911836	T	C	0.00675	NSL1	-	FALSE
chr1	152186699	T	A	0.00891	HRNR	-	FALSE
chr12	90914	C	T	0.00539	LOC100288778	+	FALSE
chr10	81114959	C	T	0.00048	PPIF	+	FALSE	MSTA	SINE,Alu
chr3	28390351	A	G	0.00200	AZI2	-	FALSE
chr3	42592902	T	C	5.80731E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	29631909	A	G	0.00029	PTPRU	+	FALSE
chr1	120163248	G	A	0.00204	ZNF697	-	FALSE
chr1	36534024	A	G	0.00635		.	FALSE	FLAM_A	SINE,Alu
chr6	42849746	A	G	0.00042	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr15	41591021	A	G	0.00427	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr6	150046603	T	C	0.00763	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	1344749	A	G	0.00307		.	FALSE	AluSx1	SINE,Alu
chr12	80168993	G	T	0.00513	PPP1R12A	-	FALSE
chr5	85916592	G	A	0.00018		.	FALSE
chr10	94414146	A	G	0.00911	KIF11	+	FALSE
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr1	45280500	A	G	0.00857		.	FALSE	AluSx	SINE,Alu
chr1	149819554	T	C	0.00137		.	FALSE	MLT1C2	SINE,Alu
chr2	8823956	A	G	2.51922E-06	ID2	+	FALSE
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr1	6283558	A	T	0.00624	ICMT	-	FALSE
chr1	64114301	T	C	0.00955	PGM1	+	FALSE
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr7	128143945	A	G	0.00607		.	FALSE	AluSq2	SINE,Alu
chr1	119574587	C	T	0.00901	WARS2	-	FALSE
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr8	25222165	A	G	0.00019	DOCK5	+	FALSE
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr1	40229368	A	G	0.00154	BMP8B,PPIE	+,-	FALSE
chr1	179077613	T	C	0.00731	ABL2	-	FALSE
chr2	128601556	T	C	3.22117E-06		.	FALSE	AluJr	SINE,Alu
chr1	145512024	A	G	0.00041	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	37331614	T	C	0.00876		.	FALSE	AluJb	SINE,Alu
chr19	11256702	T	C	6.98885E-06	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	9331101	A	G	0.00026	H6PD	+	FALSE	AluSx	SINE,Alu
chr5	125961463	A	G	0.00323	PHAX	+	TRUE	AluSz6	SINE,Alu
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	46159823	T	A	0.00461	TMEM69	+	FALSE
chr1	28835934	A	G	0.00566	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	16889864	C	A	6.58858E-05	NBPF1	-	FALSE
chr1	145586403	G	T	0.00075	NBPF20,NBPF10,PIAS3	+	FALSE
chr20	18468512	T	C	0.00072	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr14	24760808	C	T	0.00203	DHRS1	-	FALSE
chr5	43290210	A	G	0.00565	HMGCS1	-	FALSE	A-rich	SINE,Alu
chr1	116237496	T	A	0.00934	VANGL1	+	FALSE
chr1	26774224	A	G	0.00295	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	10517512	T	C	0.00646		.	FALSE	AluSx1	SINE,Alu
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr14	50053316	T	C	0.00115		.	FALSE	7SLRNA	SINE,Alu
chr1	220231276	T	C	0.00545	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr3	10192704	A	G	0.00091	VHL	+	TRUE	AluSx1	SINE,Alu
chr6	34231288	A	G	0.00143		.	FALSE
chr1	89271574	T	C	0.00074	PKN2	+	FALSE
chr4	42091668	A	G	0.00430		.	FALSE	AluSp	SINE,Alu
chr1	36067838	T	C	1.55029E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	38463218	G	A	1.86271E-07	FHL3	-	FALSE
chr2	99812988	A	G	0.00474	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	29644328	C	T	0.00014	PTPRU	+	FALSE
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	153920564	A	G	0.00323	CRTC2	-	FALSE
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr1	11298093	C	T	7.93954E-12	MTOR	-	FALSE
chr1	173863209	G	A	0.00156		.	FALSE
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr4	165998039	T	C	0.00199	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	2434523	T	C	9.26798E-05	PLCH2	+	FALSE
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr7	158719106	G	A	0.00048	WDR60	+	FALSE
chr3	189712010	G	A	1.42873E-07	P3H2	-	FALSE
chr1	93827764	A	G	0.00056	DR1	+	FALSE
chr5	56177849	C	G	0.00921	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr16	53525857	A	G	0.00093	AKTIP	-	FALSE
chr7	65619242	A	G	0.00545	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	207943285	A	G	0.00011	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	33149338	A	G	0.00367	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	47844403	C	A	0.00511	CMPK1	+	FALSE
chr5	167898510	C	G	0.00013	WWC1	+	FALSE
chr12	3150859	C	T	0.00317		.	FALSE	(CCTCCCTG)n	SINE,Alu
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr3	71005566	C	T	0.00209	FOXP1	-	FALSE	(T)n	SINE,Alu
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chr1	144014068	T	C	0.00118		.	FALSE
chr20	25428348	A	G	0.00121	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	201350983	C	T	0.00768	LAD1	-	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr5	125961011	A	G	0.00075	PHAX	+	TRUE	AluSz	SINE,Alu
chr6	31379931	G	A	0.00093		.	FALSE
chr1	19981865	A	G	0.00213	MINOS1-NBL1,NBL1	+	FALSE
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr1	100547854	T	G	0.00080	MFSD14A	+	FALSE
chr7	16899197	C	T	0.00926	AGR3	-	FALSE
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr1	118167515	C	T	0.00018	FAM46C	+	FALSE
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	50148477	C	T	0.00741	NRXN1	-	FALSE
chr1	143189473	C	A	0.00572	LOC102723769	-	FALSE
chr1	204521631	A	G	0.00024	MDM4	+	TRUE	AluSg	SINE,Alu

RBP	BCCIP
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR570CWH
Platform	HiSeq
Pubmed ID	32252787

BCCIP - Target Gene Network