RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr6	42048128	G	T	0.00604	TAF8	+	FALSE	AluSq2	SINE,Alu
chr1	10520153	T	C	0.00907		.	FALSE	AluSx	SINE,Alu
chr7	2274209	T	C	0.00578	MRM2	-	FALSE	AluJr	SINE,Alu
chr1	10517653	T	C	0.00038		.	FALSE	AluSx1	SINE,Alu
chr9	19373161	A	G	0.00647	DENND4C	+	TRUE	MADE1	SINE,Alu
chr1	42886523	T	C	0.00649	RIMKLA	+	FALSE	MIRc	SINE,Alu
chr9	131872860	C	T	0.00141	CRAT	-	FALSE
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr11	45827050	G	C	0.00045	SLC35C1	+	FALSE
chr9	124094999	G	T	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr9	86584220	G	A	0.00318	HNRNPK	-	FALSE
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr1	120163247	T	C	0.00680	ZNF697	-	FALSE
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr15	102516561	T	C	0.00805	WASH3P	+	FALSE
chr1	19586520	A	G	6.58771E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr5	37290416	T	C	0.00162		.	FALSE	AluSz	SINE,Alu
chr1	33148118	A	G	0.00374	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	17394775	G	A	0.00103	PADI2	-	FALSE
chr1	161929879	A	T	0.00680	ATF6	+	FALSE
chr10	101992425	T	C	0.00406	CWF19L1	-	TRUE	AluSq2	SINE,Alu
chr1	145376020	G	A	0.00478	NBPF20,NBPF10	+	FALSE
chr3	113370193	C	T	4.09251E-05	USF3	-	FALSE	UCON34	SINE,Alu
chr10	95163809	G	T	0.00453	MYOF	-	FALSE
chr1	100490000	A	G	0.00066	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr16	10625300	T	C	0.00178	EMP2	-	TRUE	AluSx	SINE,Alu
chr12	96661613	A	G	0.00183	ELK3	+	FALSE
chr1	162354204	C	A	0.00193	C1orf226	+	FALSE
chr2	11966317	T	C	0.00011	LPIN1	+	FALSE
chr1	16912099	G	C	0.00928	NBPF1	-	FALSE
chr1	53288862	A	G	0.00503	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	81539382	C	T	1.63276E-05	GBE1	-	FALSE
chr7	127947979	T	C	0.00257		.	FALSE	AluJr	SINE,Alu
chr5	125961647	A	G	1.53189E-07	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	154128835	G	T	0.00032	TPM3	-	FALSE
chr2	96573123	C	T	0.00413	ANKRD36C	-	FALSE
chr1	40539213	A	G	0.00693	PPT1	-	FALSE
chr15	41597559	A	G	0.00127		.	FALSE	AluSz6	SINE,Alu
chr1	990806	G	A	0.00432	AGRN	+	FALSE
chr2	204162597	A	G	0.00296	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	10520902	A	T	0.00032	DFFA	-	FALSE
chr1	155868177	G	A	7.38851E-05	RIT1	-	FALSE
chr12	98942621	A	G	4.05531E-12	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	120166681	G	A	0.00879	ZNF697	-	FALSE
chr5	93018884	A	C	0.00030	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr4	248783	A	G	0.00901	ZNF876P	+	FALSE	L1MA3	SINE,Alu
chr1	45244421	G	A	0.00925		.	FALSE
chr1	201489569	G	A	0.00145	RPS10P7	+	FALSE
chr1	16890607	G	A	0.00869	NBPF1	-	FALSE
chr4	139980667	G	T	0.00396	ELF2	-	FALSE
chr1	10519064	T	C	0.00192		.	FALSE	AluSx3	SINE,Alu
chr1	36067886	T	C	0.00150	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	37407770	G	T	0.00530	GOLGA4	+	FALSE
chr15	42550349	A	C	0.00120	TMEM87A	-	FALSE
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr4	39116911	T	C	0.00303	KLHL5	+	FALSE
chr1	78201745	G	T	0.00140	USP33	-	FALSE
chr2	75883878	T	C	0.00838	MRPL19	+	FALSE	HAL1	SINE,Alu
chr4	17804785	T	C	0.00083	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	10519912	T	C	0.00613		.	FALSE	AluJr	SINE,Alu
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr12	6572048	A	G	0.00410	VAMP1	-	FALSE
chr1	11783009	A	G	7.55078E-05		.	FALSE	AluSx	SINE,Alu
chr1	28835937	A	G	0.00061	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr10	75008815	T	C	5.77576E-09	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	120839681	C	A	0.00077	FAM72B	+	FALSE
chr1	10521172	T	C	0.00244	DFFA	-	TRUE	AluY	SINE,Alu
chr1	6583066	T	C	0.00173	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	183209052	T	C	0.00041	KLHL6	-	TRUE	AluSq	SINE,Alu
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr1	28607959	C	A	0.00230	SESN2	+	FALSE
chr1	9165685	G	A	7.66901E-05	GPR157	-	FALSE
chr3	98307696	T	G	3.25383E-09	CPOX	-	FALSE
chr1	47133835	C	A	1.43471E-05	ATPAF1	-	FALSE
chr19	3540006	T	C	3.25622E-05	C19orf71	+	FALSE	AluJo	SINE,Alu
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr15	39879717	G	A	0.00162	THBS1	+	FALSE
chr17	65335459	T	C	5.16289E-08	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	144932199	C	A	0.00584	NBPF20,PDE4DIP	+,-	FALSE
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr12	121772025	T	C	0.00562	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	109818270	C	T	0.00996	CELSR2	+	FALSE
chr4	2940026	T	C	0.00046	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr2	171850174	T	G	3.41223E-05	TLK1	-	FALSE
chr3	44791343	T	C	0.00539	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	161160460	T	A	0.00298	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr3	172351006	C	G	6.14326E-06	NCEH1	-	FALSE
chr2	242512138	A	G	9.62871E-05	BOK	+	FALSE
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr1	46076533	A	G	1.88265E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr7	11148863	T	A	0.00455	PHF14	+	FALSE
chr1	10520532	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr1	93617406	A	T	0.00275	TMED5	-	FALSE
chr1	3545200	G	A	0.00676	TPRG1L	+	FALSE
chr2	75120158	A	T	0.00222	HK2	+	FALSE
chr4	114135223	A	T	5.22810E-05	ANK2	+	FALSE
chr1	225683184	G	T	0.00741	ENAH	-	FALSE
chr1	100489996	A	G	0.00069	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr2	38975954	A	C	0.00381	SRSF7	-	FALSE
chr1	33148721	A	G	0.00359	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	109535120	G	A	6.51608E-07	WDR47	-	FALSE
chr3	15114306	T	C	0.00036	RBSN	-	TRUE	AluY	SINE,Alu
chr1	1662754	T	C	0.00107	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	10517688	T	C	0.00630		.	FALSE	AluSx1	SINE,Alu
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	168220340	A	G	0.00960		.	FALSE	AluSz6	SINE,Alu
chr3	121351287	A	G	0.00656	HCLS1	-	FALSE
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr1	1595048	T	C	0.00399	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	86251114	T	C	0.00709		.	FALSE	AluSx	SINE,Alu
chr19	45406538	C	G	0.00119	TOMM40	+	FALSE
chr1	1650657	C	G	0.00379	CDK11B,CDK11A	-	FALSE
chr1	36067752	T	C	0.00031	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	32404176	C	T	0.00342	ZFR	-	FALSE
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr4	40631476	C	A	5.49937E-05	RBM47	-	FALSE
chr1	10520331	C	T	0.00065		.	FALSE	AluSx1	SINE,Alu
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr1	10517635	T	C	0.00553		.	FALSE	AluSx1	SINE,Alu
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr1	45241587	G	A	0.00248	RPS8,SNORD55	+	FALSE
chr19	11945685	A	G	0.00016	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	40219280	T	C	0.00025	PPIE	+	FALSE
chr1	153507176	C	T	0.00957	S100A6	-	FALSE
chr4	39552175	T	C	0.00010	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr3	50150360	A	G	0.00651	RBM5	+	TRUE	AluSx	SINE,Alu
chr4	123859284	C	T	0.00034	SPATA5	+	FALSE
chr1	145511958	A	G	0.00038	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr1	59120961	G	A	0.00383	MYSM1	-	FALSE
chr1	160967754	T	C	0.00563	F11R	-	TRUE	(T)n	SINE,Alu
chr2	132481245	T	G	0.00382	C2orf27A	+	FALSE
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr1	182358196	C	G	0.00929	GLUL	-	FALSE
chr1	145688944	A	G	0.00359	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr8	146200271	T	C	0.00182	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr7	29960211	C	A	0.00034	SCRN1	-	FALSE
chr1	19543457	T	C	4.71011E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	141879810	T	C	0.00784	GK5	-	FALSE	AluJr	SINE,Alu
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr9	21863618	T	C	0.00148	MTAP	+	FALSE	AluY	SINE,Alu
chrX	77083846	T	C	0.00668	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	27202789	T	C	0.00026		.	FALSE	AluSq2	SINE,Alu
chr1	38327586	C	T	0.00198	INPP5B	-	FALSE	AluSx3	SINE,Alu
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr1	145441838	C	G	0.00790	NBPF20,NBPF10,TXNIP	+	FALSE
chr5	149823786	C	T	0.00327		.	FALSE
chr1	28826150	A	G	0.00052	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	144595935	G	A	0.00061	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	10440643	A	G	0.00055	KIF1B	+	TRUE	AluSx	SINE,Alu
chr2	99812864	A	G	0.00810	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	79356400	C	T	0.00714	ADGRL4	-	FALSE
chr1	179326295	A	G	0.00035	SOAT1	+	TRUE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr7	19736460	A	G	6.53378E-05	TWISTNB	-	FALSE	MER33	SINE,Alu
chr2	191067764	A	T	0.00165	C2orf88	+	FALSE
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr1	109795026	T	C	0.00355	CELSR2	+	FALSE
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr3	15114395	T	C	0.00333	RBSN	-	TRUE	AluY	SINE,Alu
chr1	121133733	G	A	0.00552	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	145369589	T	C	0.00696	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	151742798	T	C	0.00626	OAZ3	+	FALSE
chrX	123046741	A	G	0.00169	XIAP	+	TRUE	AluSz	SINE,Alu
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr2	37331125	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr1	6582689	T	C	4.44823E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr7	2290522	C	T	0.00517	NUDT1	+	FALSE
chr3	181430143	G	T	0.00126	SOX2-OT,SOX2	+	FALSE
chr2	86249930	T	C	0.00269	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr5	37291617	T	C	0.00022		.	FALSE	AluSx3	SINE,Alu
chrX	2824343	T	C	0.00108	ARSD	-	TRUE	AluJb	SINE,Alu
chr1	217804325	G	A	0.00229	GPATCH2	-	FALSE
chr8	133859871	T	A	0.00027	PHF20L1	+	FALSE
chr1	9328102	A	G	7.16435E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr3	24163645	C	G	1.00972E-05	THRB	-	FALSE
chr1	59124223	G	A	0.00327	MYSM1	-	FALSE	MIR3	SINE,Alu
chr1	6282301	T	C	0.00290	ICMT	-	TRUE	AluSz	SINE,Alu
chr6	109786003	T	C	0.00245	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr2	217366674	A	G	0.00889		.	FALSE	AluSz	SINE,Alu
chr1	220231946	T	C	0.00439	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr17	53470462	C	T	0.00230	MMD	-	FALSE
chr7	131241052	A	G	0.00663	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr9	125609938	A	T	0.00904		.	FALSE
chr1	144930596	C	A	0.00103	NBPF20,PDE4DIP	+,-	FALSE
chr1	35646125	C	T	0.00027	SFPQ	-	FALSE
chr2	37429627	A	G	0.00330	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr9	14764	C	T	0.00491	WASH1	-	FALSE
chr1	28826118	A	G	0.00039	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	33149486	A	G	5.00374E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr16	81064629	A	G	6.04166E-07	CENPN	+	TRUE	AluSg	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr1	19543465	T	C	0.00638	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10367058	G	A	0.00328	KIF1B	+	FALSE
chr1	3546136	A	G	2.71404E-05	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	144931101	G	A	0.00358	NBPF20,PDE4DIP	+,-	FALSE
chr1	145281543	C	T	0.00028	NBPF20,NOTCH2NL	+	FALSE
chr2	208620129	A	G	0.00167	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr2	11323106	G	T	0.00860	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr4	95586224	A	G	0.00053	PDLIM5	+	FALSE
chr3	10192717	A	G	3.16601E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr19	57802824	G	A	0.00924	ZNF460	+	FALSE
chr1	26802457	C	A	0.00962	HMGN2	+	FALSE
chr1	45244432	T	A	0.00154		.	FALSE
chr1	93308168	T	A	0.00314	FAM69A	-	FALSE
chr1	15993699	C	A	0.00011		.	FALSE	AluSx4	SINE,Alu
chr2	176792531	C	T	0.00779	LNPK	-	FALSE
chr1	229762054	T	A	0.00535	URB2	+	FALSE
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr1	26755643	A	G	0.00728	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	28662186	A	G	8.22643E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr22	22050366	T	C	0.00449	PPIL2	+	FALSE	MER5A	SINE,Alu
chr1	6283264	T	C	0.00378	ICMT	-	TRUE	AluSx3	SINE,Alu
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr2	206987636	T	C	0.00093		.	FALSE	AluJb	SINE,Alu
chr2	206986380	T	C	0.00053		.	FALSE	AluSz	SINE,Alu
chr7	6442892	C	A	0.00675	RAC1	+	FALSE
chr1	1550392	C	T	0.00617		.	FALSE	AluSg	SINE,Alu
chr1	144595935	G	A	0.00860	NBPF20	+	FALSE	AluJb	SINE,Alu
chr3	14986098	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	180013235	T	G	0.00319	CEP350	+	FALSE
chr1	222802926	C	T	0.00035	MIA3	+	FALSE
chr1	59120961	G	A	9.55369E-05	MYSM1	-	FALSE
chr1	204526727	A	G	0.00033	MDM4	+	TRUE	AluSx	SINE,Alu
chr5	96366315	T	C	0.00319		.	FALSE	(TC)n	SINE,Alu
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr17	66264542	A	T	0.00110	ARSG,SLC16A6	+,-	FALSE
chr13	111111173	G	A	0.00224	COL4A2,COL4A2-AS2	+,-	FALSE
chr1	31732602	C	A	0.00148	SNRNP40	-	FALSE
chr6	74134869	T	C	0.00024	MB21D1	-	TRUE	AluSz	SINE,Alu
chr8	101269589	A	T	0.00281	RNF19A	-	FALSE
chr1	148241604	G	T	0.00756	NBPF8	-	FALSE	U1	SINE,Alu
chr2	242164677	A	G	0.00117	ANO7	+	TRUE	AluSg	SINE,Alu
chr2	88895123	T	C	0.00706	EIF2AK3	-	FALSE
chr1	32687473	T	G	0.00892	TMEM234,EIF3I	+,-	FALSE
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr2	61278030	A	G	0.00218	PEX13	+	TRUE	AluY	SINE,Alu
chr1	10521103	T	C	0.00788	DFFA	-	TRUE	AluY	SINE,Alu
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	43272842	A	T	5.86577E-06	SVBP	-	FALSE
chr7	44917316	T	C	0.00564	PURB	-	FALSE	AluSz	SINE,Alu
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	36067760	T	C	1.59237E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	36806071	G	A	0.00126	STK40	-	FALSE
chr5	172396725	T	A	0.00014	RPL26L1	+	FALSE
chr1	214531079	A	G	0.00124	PTPN14	-	FALSE
chr2	128952015	A	G	0.00908	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr3	122283289	C	A	0.00072	DTX3L,PARP9	+,-	FALSE
chr1	24798068	C	A	0.00686	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr2	1636938	C	T	0.00072	PXDN	-	FALSE	(T)n	SINE,Alu
chr1	21101368	T	C	0.00031	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr1	120163248	G	A	0.00711	ZNF697	-	FALSE
chr3	195243023	A	C	0.00729	PPP1R2	-	FALSE
chr16	48387238	A	G	0.00013	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	227071525	C	T	0.00085	PSEN2	+	FALSE
chr1	53289686	A	G	0.00265	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr3	10142949	C	T	0.00612	FANCD2,FANCD2OS	+,-	FALSE
chr11	9602076	T	C	7.58058E-05	WEE1	+	FALSE	AluSg	SINE,Alu
chr1	20976023	T	C	6.30669E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	8996878	A	T	9.26766E-05	MBOAT2	-	FALSE	AluSz	SINE,Alu
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr3	150261569	T	G	0.00173	SERP1	-	FALSE
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	28661576	A	G	0.00625	MED18	+	TRUE	AluSg	SINE,Alu
chr17	1486543	G	C	0.00452	SLC43A2	-	FALSE
chr2	36706788	C	G	0.00481	CRIM1	+	FALSE
chr1	143399383	T	A	0.00198		.	FALSE	L1MC4	SINE,Alu
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr2	1652354	G	A	0.00114	PXDN	-	FALSE
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr7	20178460	T	C	6.50978E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	53289686	A	G	0.00063	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	158066834	A	G	0.00609	KIRREL	+	FALSE
chr19	16663345	T	C	0.00304	SLC35E1	-	TRUE	AluSg	SINE,Alu
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr5	17276080	A	C	0.00298	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	148004475	C	G	7.81276E-06	NBPF8	-	FALSE
chr1	6282371	T	C	0.00054	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	32799508	A	C	8.53764E-05	MARCKSL1	-	FALSE
chr1	10517485	T	C	0.00260		.	FALSE	AluSx1	SINE,Alu
chr1	112266790	C	T	0.00892	FAM212B	-	FALSE
chr3	10192652	A	G	0.00155	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr1	36031860	G	T	0.00564	NCDN	+	FALSE
chr1	145513051	A	G	0.00269	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chrX	3526616	G	A	0.00971	PRKX	-	FALSE
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr8	144940798	T	C	0.00255	EPPK1	-	FALSE
chr1	16945409	T	A	0.00105	CROCCP2	-	FALSE
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE
chr2	85621889	C	T	0.00366	CAPG	-	FALSE
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr1	211921702	T	C	0.00014	LPGAT1	-	FALSE
chr1	177976440	C	T	0.00148	LOC730102	-	FALSE
chr2	99772827	A	G	0.00377	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr12	124146100	A	G	4.66106E-08	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr2	210885022	C	T	0.00325	RPE	+	FALSE
chr2	3609064	G	A	0.00194	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr1	13942885	C	A	0.00038	PDPN	+	FALSE
chr1	148752615	C	A	0.00042		.	FALSE
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	45120664	C	T	0.00437	TMEM53	-	FALSE
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr3	33909024	A	T	0.00134	PDCD6IP	+	FALSE
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	200375005	A	T	0.00202	ZNF281	-	FALSE
chr6	42047404	A	G	0.00182	TAF8	+	TRUE	AluSz6	SINE,Alu
chr8	17503270	G	C	0.00410	MTUS1	-	FALSE
chr2	208619699	A	G	0.00741	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr2	37429532	A	G	0.00014	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr19	12742509	A	G	0.00717		.	FALSE	AluSx	SINE,Alu
chr2	203745105	T	C	0.00644		.	FALSE	AluSx	SINE,Alu
chr1	42693597	A	G	0.00106	FOXJ3	-	FALSE
chr6	42856158	A	G	0.00118	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	38296817	G	A	3.46922E-11	OXSR1	+	FALSE
chr1	31905889	A	G	0.00565	SERINC2	+	FALSE
chr1	26143725	A	T	0.00920	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	10194192	T	C	0.00715	KLF11	+	FALSE
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr2	99813003	A	G	2.46688E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr4	156273768	T	C	0.00058	MAP9	-	FALSE
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr5	95130804	C	T	0.00792	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr16	9200168	A	T	0.00908	C16orf72	+	FALSE	AluSx1	SINE,Alu
chr1	53291425	A	G	0.00034	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	205057482	A	T	0.00907	RBBP5	-	FALSE
chr17	47007752	A	T	0.00029	SNF8	-	FALSE
chr3	121382204	C	T	0.00309	GOLGB1	-	FALSE
chr2	143638994	G	A	0.00075	KYNU	+	FALSE
chr9	116812614	A	G	0.00674	ZNF618	+	FALSE
chr1	32697071	C	A	0.00134	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	78483452	C	T	0.00094	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr2	61316542	A	G	0.00033	KIAA1841	+	TRUE	AluSx1	SINE,Alu
chr1	33071043	A	G	4.49838E-05	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr3	197611125	A	G	0.00948		.	FALSE	AluSx1	SINE,Alu
chr3	50296330	G	A	0.00645	GNAI2	+	FALSE
chr1	15991645	T	C	0.00361		.	FALSE	AluSp	SINE,Alu
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chrX	16781156	A	G	0.00061		.	FALSE	AluJo	SINE,Alu
chrX	123045342	A	G	0.00381	XIAP	+	FALSE	(ATAA)n	SINE,Alu
chr1	28825331	A	G	0.00563	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	116237496	T	A	0.00934	VANGL1	+	FALSE
chr2	37327677	T	C	0.00019		.	FALSE
chr2	85548074	T	C	0.00724	TGOLN2	-	FALSE
chr2	172178540	T	C	0.00040	METTL8	-	TRUE	AluSx3	SINE,Alu
chr1	214524576	T	C	0.00408	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	47905554	C	G	0.00297	FOXD2	+	FALSE
chr1	569983	G	A	0.00076		.	FALSE
chr1	145689843	A	G	4.95254E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr3	139086995	C	A	0.00743	COPB2	-	FALSE
chr2	37330435	T	C	0.00401		.	FALSE	AluSq2	SINE,Alu
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr3	48787046	T	C	0.00699	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	6582161	T	C	0.00697	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	20980225	G	T	0.00055	DDOST	-	FALSE
chr8	146200283	T	C	0.00082	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr14	75202512	A	G	0.00053	FCF1	+	TRUE	AluSc	SINE,Alu
chr6	109784327	T	C	0.00854	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr2	91805816	G	A	2.75786E-10		.	FALSE
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr1	87328397	A	T	0.00252	SEP15	-	FALSE
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr1	46078630	A	G	0.00131	NASP	+	FALSE
chr1	44685732	T	C	8.08877E-10	DMAP1	+	FALSE
chr3	10192785	A	G	0.00741	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	98518158	A	T	0.00960	DCBLD2	-	FALSE
chr2	101186088	C	T	0.00817	PDCL3	+	FALSE
chr1	10517538	T	C	0.00840		.	FALSE	AluSx1	SINE,Alu
chr1	118066459	A	G	0.00360	MAN1A2	+	FALSE
chr1	99164434	G	A	0.00911	SNX7	+	FALSE
chr1	36068281	T	C	0.00331	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	8045340	C	A	0.00059	PARK7	+	FALSE
chr5	154194476	T	A	0.00611	LARP1	+	FALSE
chrX	54587249	A	G	0.00769	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr3	10192784	A	G	1.73909E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	144922523	C	T	0.00566	NBPF20,PDE4DIP	+,-	FALSE
chr1	40147856	T	C	0.00205	HPCAL4	-	TRUE
chr1	10517623	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr1	200375837	T	G	0.00490	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	8412989	A	G	0.00190	RERE	-	FALSE
chr4	76568479	T	A	0.00825	G3BP2	-	FALSE
chr2	46852033	A	G	0.00543	CRIPT	+	FALSE
chr1	92147985	C	A	0.00370	TGFBR3	-	FALSE
chr1	21545088	T	C	0.00737	ECE1	-	FALSE	AluSx1	SINE,Alu
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr1	26143725	A	T	0.00112	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	19670869	A	G	0.00568	CAPZB	-	FALSE
chr1	65692499	C	T	0.00235	AK4	+	FALSE	(T)n	SINE,Alu
chr1	9161199	T	C	0.00468		.	FALSE	AluSx	SINE,Alu
chr1	6583109	T	C	6.65543E-05	NOL9	-	TRUE	AluSx4	SINE,Alu
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr1	120164545	T	G	0.00058	ZNF697	-	FALSE
chr2	74442407	A	G	0.00384	MTHFD2	+	FALSE
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr4	1205668	C	A	0.00132	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr3	15113893	T	C	0.00042	RBSN	-	TRUE	AluSz6	SINE,Alu
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	21779925	T	G	0.00860	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr1	16576836	A	G	0.00885	FBXO42	-	FALSE
chr19	37073373	T	C	0.00492	ZNF529,ZNF529-AS1	+,-	FALSE	AluY	SINE,Alu
chr1	230416038	G	A	0.00626	GALNT2	+	FALSE
chr2	102484488	A	G	0.00192	MAP4K4	+	FALSE
chr3	48787674	T	C	0.00240	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr5	130540369	C	A	0.00196	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	10518733	T	C	0.00952		.	FALSE	AluSx1	SINE,Alu
chr2	20648961	T	C	0.00304	RHOB	+	FALSE
chr17	73885248	T	C	0.00017	TRIM65	-	TRUE	AluSg	SINE,Alu
chrX	2824979	T	C	0.00049	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	116239841	A	T	0.00069	VANGL1	+	FALSE
chr1	10520702	T	C	0.00883	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	91486839	T	C	0.00514	ZNF644	-	FALSE
chr5	125962086	A	G	0.00231	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr1	101444065	T	C	0.00927	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr2	206986988	T	C	0.00957		.	FALSE	AluJr	SINE,Alu
chr1	53291382	A	G	0.00114	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr6	29910604	C	A	0.00144		.	FALSE
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr17	65334726	T	C	7.47982E-07	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	145512925	A	G	0.00230	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	195701388	G	A	0.00274	SDHAP1	-	FALSE

RBP	TARDBP
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR134JRE
Platform	HiSeq
Pubmed ID	32252787

TARDBP - Target Gene Network