RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	110136321	T	A	0.00721	GNAI3	+	FALSE
chr6	42856019	A	G	0.00184	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr12	69237020	A	G	0.00378	MDM2	+	TRUE
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr8	144940792	G	C	9.20360E-05	EPPK1	-	FALSE
chr11	6411935	T	C	0.00905	SMPD1	+	FALSE	(CTGGCG)n	SINE,Alu
chr1	148928344	A	G	0.00608	LOC645166	+	FALSE	TAR1	SINE,Alu
chr1	45671434	G	C	0.00819	ZSWIM5	-	FALSE
chr19	7116734	A	T	0.00981	INSR	-	FALSE	(A)n	SINE,Alu
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	17522430	A	G	0.00684		.	FALSE
chr7	63808867	C	A	0.00556	ZNF736	+	FALSE
chr16	87440117	C	T	1.93168E-06	ZCCHC14	-	FALSE
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr1	23631625	A	G	0.00536	HNRNPR	-	FALSE	UCON44	SINE,Alu
chr1	40229368	A	G	0.00154	BMP8B,PPIE	+,-	FALSE
chr4	190878580	A	G	0.00097	FRG1	+	FALSE
chr1	160967817	T	C	0.00478	F11R	-	TRUE	AluSp	SINE,Alu
chr4	2940462	T	C	6.45116E-07	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr7	299940	G	A	8.49279E-08	FAM20C	+	FALSE
chr1	145509569	A	G	0.00777	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	10517688	T	C	0.00020		.	FALSE	AluSx1	SINE,Alu
chr1	117644949	C	G	0.00862	TTF2	+	FALSE
chr11	93466866	G	T	0.00559	MIR1304	-	FALSE	AluJr	SINE,Alu
chr11	8707396	C	A	0.00081	RPL27A	+	FALSE
chr5	118729619	A	G	0.00586	TNFAIP8	+	FALSE
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr1	214527252	G	A	0.00830	PTPN14	-	FALSE	MADE2	SINE,Alu
chr1	109240643	A	C	0.00608	PRPF38B	+	FALSE
chr1	36642420	T	C	0.00188	MAP7D1	+	FALSE
chr1	109795026	T	C	0.00355	CELSR2	+	FALSE
chr2	203743821	T	C	0.00880		.	FALSE	AluSx3	SINE,Alu
chr1	160967755	C	T	0.00563	F11R	-	FALSE	(T)n	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr1	113212974	A	T	0.00424	CAPZA1	+	FALSE
chr3	188602081	A	C	7.06828E-05	LPP	+	FALSE	MIRc	SINE,Alu
chr1	11979807	C	A	0.00574	KIAA2013	-	FALSE
chr1	25570565	G	A	0.00244	RSRP1	-	FALSE	Alu	SINE,Alu
chr6	150046601	T	C	0.00073	NUP43	-	TRUE	AluSq2	SINE,Alu
chr19	39433143	C	T	0.00235	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr1	3545184	G	T	0.00347	TPRG1L	+	FALSE
chr1	987670	T	G	0.00148	AGRN	+	FALSE
chr2	36706788	C	G	0.00481	CRIM1	+	FALSE
chr1	9160989	T	C	0.00495		.	FALSE	AluJb	SINE,Alu
chr5	122165482	C	T	0.00367	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	23833607	A	T	0.00831	E2F2	-	FALSE
chr1	90496700	A	G	0.00486	ZNF326	+	FALSE
chr1	16935130	C	T	0.00288	NBPF1	-	FALSE
chr9	91724517	C	T	0.00289	SHC3	-	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chr1	155695998	A	G	0.00574	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	46076468	A	G	3.83065E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr2	102484482	G	A	0.00213	MAP4K4	+	FALSE
chr3	189713205	T	C	4.97145E-05	P3H2	-	FALSE
chr14	75202645	A	G	3.73418E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr1	19543456	T	C	3.77297E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	31732677	G	A	0.00030	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr1	11150682	C	T	3.65592E-05	EXOSC10	-	FALSE
chr22	18571477	A	G	4.57932E-05	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr2	220406239	T	G	0.00035	CHPF	-	FALSE	MIRb	SINE,Alu
chr1	949608	G	A	0.00416	ISG15	+	FALSE
chr1	33148006	A	G	0.00110	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr7	299843	G	A	6.16222E-05	FAM20C	+	FALSE
chr1	28662157	A	G	0.00159	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr19	59095449	A	G	6.25071E-06	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr4	57326291	A	G	0.00424	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	153920564	A	G	0.00323	CRTC2	-	FALSE
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr2	206987634	T	C	0.00281		.	FALSE	AluJb	SINE,Alu
chr5	37291482	T	C	0.00146		.	FALSE	AluSx3	SINE,Alu
chr1	149913733	T	C	0.00143	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	36032276	A	T	0.00012	NCDN	+	FALSE	(CA)n	SINE,Alu
chr3	195243023	A	C	0.00729	PPP1R2	-	FALSE
chr3	172115902	G	A	9.15134E-06	FNDC3B	+	FALSE
chr5	118175329	T	C	2.47285E-05	DTWD2	-	TRUE	AluJr	SINE,Alu
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10519947	T	C	0.00328		.	FALSE	AluJr	SINE,Alu
chr7	66038472	G	A	0.00964	GS1-124K5.11	-	FALSE
chr4	10443060	T	G	0.00167	ZNF518B	-	FALSE
chr1	155144757	T	C	0.00758	KRTCAP2	-	FALSE	Tigger19b	SINE,Alu
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr1	41972198	A	T	0.00276	HIVEP3	-	FALSE
chr19	19792403	A	G	1.20818E-05	ZNF101	+	TRUE	AluJb	SINE,Alu
chr2	85776832	C	T	0.00514	GGCX	-	FALSE
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr7	102090451	A	G	0.00360	ORAI2	+	TRUE	AluSz	SINE,Alu
chr12	121772025	T	C	0.00562	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr8	6263057	A	C	0.00419	LOC100287015	-	FALSE
chr1	160967855	T	C	0.00548	F11R	-	TRUE	AluSp	SINE,Alu
chr2	70452141	C	A	0.00191	TIA1	-	FALSE
chr1	20976023	T	C	0.00889	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr4	187628395	T	A	0.00000	FAT1	-	FALSE
chr1	20978304	T	A	0.00018	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr1	1419678	A	G	0.00558	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr9	14810	C	G	0.00709	WASH1	-	FALSE
chr1	16952481	A	G	0.00093	CROCCP2	-	FALSE
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr2	32535568	A	G	0.00192		.	FALSE	MER8	SINE,Alu
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	6583270	C	G	0.00026	NOL9	-	FALSE
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr1	160112340	A	G	0.00374	ATP1A2	+	TRUE	AluSx3	SINE,Alu
chr2	1637648	T	C	9.03854E-11	PXDN	-	FALSE
chr14	102547384	A	T	0.00403	HSP90AA1	-	FALSE
chr22	18572597	A	G	0.00322	PEX26	+	TRUE	AluYf1	SINE,Alu
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr1	16889513	T	C	0.00777	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	172410967	G	A	1.85684E-05	C1orf105,PIGC	+,-	FALSE
chr1	93827764	A	G	0.00098	DR1	+	FALSE
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr1	1594940	T	C	0.00115	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	28607959	C	A	0.00230	SESN2	+	FALSE
chr4	103731698	T	C	0.00029	UBE2D3	-	TRUE	AluYk2	SINE,Alu
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr1	242048674	C	T	0.00093	EXO1	+	FALSE
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr1	94352646	G	T	0.00645	GCLM	-	FALSE	AluSx1	SINE,Alu
chr2	200813126	T	C	0.00713	TYW5	-	FALSE
chr1	78142911	T	C	0.00925	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chr1	31405707	G	T	0.00431	PUM1	-	FALSE
chr1	19585519	A	G	6.02134E-06	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	145209366	A	G	0.00499	NBPF20,NOTCH2NL	+	FALSE
chr5	177311217	T	C	0.00840	LOC728554	+	FALSE	A-rich	SINE,Alu
chr3	86994021	T	C	0.00596	VGLL3	-	FALSE
chr1	16889502	T	C	0.00516	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr1	9161365	T	C	4.68504E-05		.	FALSE	AluSx	SINE,Alu
chr1	157043632	C	T	0.00085		.	FALSE
chr9	136209400	A	G	0.00328	MED22	-	FALSE
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	63924020	C	T	0.00139	ITGB3BP	-	FALSE
chr1	26673076	G	A	0.00465	AIM1L	-	FALSE
chr12	131356731	T	C	2.96756E-07	RAN	+	FALSE	(GGCCGG)n	SINE,Alu
chr1	145689568	A	G	8.25649E-05	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr9	37503490	A	G	0.00612	POLR1E	+	TRUE	AluJb	SINE,Alu
chr1	36068276	T	C	5.36857E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	26143727	A	T	0.00917	SEPN1	+	FALSE	AluSx	SINE,Alu
chr3	10320968	T	A	0.00237	TATDN2	+	FALSE
chr2	185802243	C	A	0.00172	ZNF804A	+	FALSE
chr12	123253723	A	G	0.00371	DENR	+	TRUE	(AT)n	SINE,Alu
chr1	19232017	T	G	0.00723	IFFO2	-	FALSE
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr16	81064649	A	G	0.00019	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	23636277	A	T	0.00295	HNRNPR	-	FALSE
chr1	21810587	A	G	0.00563	NBPF3	+	FALSE
chr1	28087457	G	T	0.00178	FAM76A	+	FALSE	(T)n	SINE,Alu
chr3	183534913	A	G	0.00367	MAP6D1	-	FALSE
chr9	89626918	A	G	0.00048	LOC440173	-	FALSE
chr1	19543356	T	C	0.00110	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	146649884	T	A	0.00338	PDIA3P1	+	FALSE
chr16	90037828	G	A	0.00029	CENPBD1	-	FALSE	Tigger12	SINE,Alu
chr1	31905886	C	A	0.00273	SERINC2	+	FALSE
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr1	38174665	G	A	0.00339	CDCA8	+	FALSE
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	14986111	T	C	0.00653	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr1	160967856	T	C	0.00491	F11R	-	TRUE	AluSp	SINE,Alu
chr1	95362953	T	C	0.00072	CNN3	-	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr15	41593268	A	G	0.00084		.	FALSE	AluSz6	SINE,Alu
chr4	25749191	T	C	0.00301	SEL1L3	-	FALSE
chr1	214524531	T	C	0.00753	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	894375	G	A	0.00052	NOC2L	-	FALSE
chr1	144595935	G	A	0.00837	NBPF20	+	FALSE	AluJb	SINE,Alu
chr3	24019989	C	T	0.00339	NR1D2	+	FALSE
chr1	1595527	T	C	0.00139	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr11	111930765	T	C	0.00764	DLAT	+	FALSE
chr1	27992798	C	A	0.00690	IFI6	-	FALSE	FAM	SINE,Alu
chr1	10517998	T	C	0.00821		.	FALSE	AluJr	SINE,Alu
chr2	46839477	T	C	0.00033	PIGF	-	FALSE
chr1	146643580	G	A	0.00113	PRKAB2	-	FALSE
chr3	24019977	A	C	0.00281	NR1D2	+	FALSE
chr5	79923793	T	C	0.00664	DHFR	-	TRUE	AluSp	SINE,Alu
chr2	242384368	G	A	0.00031	FARP2	+	FALSE	AluJr	SINE,Alu
chr1	212254067	G	A	0.00714	DTL	+	FALSE
chr1	26755303	A	G	0.00129	LIN28A	+	TRUE	AluSx1	SINE,Alu
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr10	117823568	T	A	0.00483	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr2	33623905	G	T	0.00262	LTBP1	+	FALSE
chr2	203742126	T	C	0.00451		.	FALSE	AluJb	SINE,Alu
chr1	53679610	G	A	0.00217	CPT2	+	FALSE	AluSz	SINE,Alu
chr2	75887834	T	C	0.00024	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr11	48189152	A	C	0.00050	PTPRJ	+	FALSE
chr1	144868170	C	T	0.00750	NBPF20,PDE4DIP	+,-	FALSE
chr1	1344893	A	G	7.94078E-08		.	FALSE	AluSg	SINE,Alu
chr1	29519736	T	C	0.00610	MECR	-	TRUE	AluJb	SINE,Alu
chr2	179973026	T	C	0.00210	SESTD1	-	FALSE
chr1	179044180	A	G	0.00416	FAM20B	+	TRUE	AluSx	SINE,Alu
chr6	114181223	A	G	0.00365	MARCKS	+	FALSE
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr2	128951094	A	G	0.00415	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	33148118	A	G	0.00374	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr4	89625427	G	C	0.00025	HERC3	+	FALSE
chr3	124948049	T	C	0.00709	ZNF148	-	TRUE
chr6	97592897	A	C	0.00144	MMS22L	-	FALSE
chr3	15113042	C	T	4.09809E-05	RBSN	-	FALSE
chr19	19793168	A	G	0.00481	ZNF101	+	TRUE	AluSz	SINE,Alu
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr2	37331025	T	C	0.00029		.	FALSE	AluSx1	SINE,Alu
chr20	25428646	A	G	9.98122E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr15	85185502	T	C	0.00058	WDR73,SCAND2P	+,-	FALSE	AluSc	SINE,Alu
chr1	6582221	T	C	0.00879	NOL9	-	TRUE	AluSq4	SINE,Alu
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr4	56298300	G	A	7.51019E-06	CLOCK	-	FALSE
chr12	52631385	G	C	0.00777	KRT7	+	FALSE
chr3	10192744	A	G	3.36147E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr13	24823699	G	A	0.00472	SPATA13	+	FALSE
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr4	17488286	T	G	0.00027	QDPR	-	FALSE
chr3	88104072	T	A	0.00815	CGGBP1	-	FALSE
chr1	26143725	A	T	0.00920	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	19542463	T	C	0.00111	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	178406764	C	T	0.00416	AGPS	+	FALSE
chr1	148251083	T	C	0.00041	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr1	139233	C	A	0.00653	LOC729737	-	FALSE
chr1	10519912	T	C	0.00185		.	FALSE	AluJr	SINE,Alu
chr3	137787047	C	T	0.00735	DZIP1L	-	FALSE
chr9	14921850	A	G	0.00112		.	FALSE
chr12	98942820	A	G	0.00568	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	113212976	C	T	0.00332	CAPZA1	+	FALSE
chr12	125512173	A	G	0.00285		.	FALSE	AluSx1	SINE,Alu
chr1	6282401	T	C	0.00026	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	145689843	A	G	4.95254E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr2	109401284	G	C	0.00059	RANBP2	+	FALSE
chr11	63394016	T	C	0.00106	ATL3	-	FALSE
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	21810903	A	G	0.00498	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr1	1571802	G	A	0.00067	CDK11B	-	FALSE
chr1	244219905	G	T	0.00772	ZBTB18	+	FALSE
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	40759231	A	G	0.00168	ZMPSTE24	+	FALSE
chr1	53289686	A	G	0.00029	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	53292875	G	T	8.43181E-07	ZYG11B	+	FALSE
chr1	145329095	C	G	0.00261	NBPF20,NBPF10	+	FALSE
chr2	242122440	C	A	0.00354	PPP1R7	+	FALSE
chr17	4929000	A	G	0.00214	KIF1C	+	TRUE	AluY	SINE,Alu
chr1	11347155	C	T	0.00273	UBIAD1	+	FALSE
chr7	131241049	G	A	0.00145	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr1	38279987	T	C	0.00980	MTF1	-	FALSE
chrX	102613351	A	G	0.00969	TCEAL9	+	FALSE	L1ME4a	SINE,Alu
chr1	120612154	C	G	0.00054	NOTCH2	-	FALSE
chr6	17557412	C	T	0.00986	CAP2	+	FALSE
chr1	1647902	A	T	0.00191	CDK11B,CDK11A	-	FALSE
chr10	101992425	T	C	0.00406	CWF19L1	-	TRUE	AluSq2	SINE,Alu
chr4	42088291	C	A	0.00000	SLC30A9	+	FALSE
chr22	29904354	G	A	0.00072	THOC5	-	FALSE
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr6	3114457	C	T	0.00320	RIPK1	+	FALSE
chr11	769393	T	C	0.00186	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr17	7123232	C	G	0.00250	DLG4,ACADVL	+,-	FALSE
chr1	246829742	T	C	0.00960	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr17	38798073	T	G	0.00692	SMARCE1	-	FALSE
chr17	36936846	C	T	0.00277	PIP4K2B	-	FALSE
chr1	155851645	A	G	4.46102E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr3	15112501	T	C	2.98131E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr12	56510698	C	G	0.00944	RPL41	+	FALSE
chr1	118066459	A	G	1.18472E-05	MAN1A2	+	FALSE
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr1	26582091	G	A	0.00172	CEP85	+	FALSE
chr1	117945040	G	A	0.00181	MAN1A2	+	FALSE
chr1	100654765	T	C	0.00254	DBT	-	TRUE	AluSz	SINE,Alu
chr1	236208773	C	T	0.00722	NID1	-	FALSE
chr1	114940210	T	G	0.00028	TRIM33	-	FALSE	(T)n	SINE,Alu
chr5	135392426	T	C	8.62804E-07	TGFBI	+	FALSE
chr14	50792787	A	G	0.00278	ATP5S	+	TRUE	AluSx	SINE,Alu
chr2	170497651	C	T	0.00195		.	FALSE
chr1	182360930	A	G	0.00506	GLUL	-	FALSE
chr15	42503335	T	C	0.00023	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr3	14986110	T	C	1.11022E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	226333558	A	C	0.00722	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	204524842	A	G	0.00044	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	225678910	T	C	2.51322E-05	ENAH	-	TRUE	AluSx1	SINE,Alu
chr3	160283126	A	C	0.00564	KPNA4	-	FALSE
chr1	24796069	A	C	0.00403	NIPAL3	+	FALSE
chr1	16889414	T	C	0.00858	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr17	65335430	T	C	0.00019	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	152884246	G	T	0.00536	IVL	+	FALSE
chr5	442075	C	A	0.00962	EXOC3-AS1	-	FALSE
chr1	113213004	G	T	0.00206	CAPZA1	+	FALSE
chr15	90820171	A	G	0.00185		.	FALSE
chr1	100489835	A	G	0.00043	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr3	122283292	C	G	0.00047	DTX3L,PARP9	+,-	FALSE
chr12	7045885	A	C	0.00473	ATN1	+	FALSE	(CAG)n	SINE,Alu
chr2	39050141	A	C	0.00924	DHX57	-	FALSE
chrX	123046290	A	G	0.00524	XIAP	+	TRUE	AluJb	SINE,Alu
chr2	24225006	A	G	0.00141		.	FALSE	AluSx	SINE,Alu
chr1	1421531	C	A	0.00467	ATAD3B	+	FALSE
chr9	46687845	G	C	0.00389	FGF7P6,LOC554249,LOC102724238	+,-	FALSE
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr10	75009585	T	C	2.45347E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	1650807	T	C	0.00104	CDK11B,CDK11A	-	FALSE
chr2	206986926	T	C	0.00913		.	FALSE	AluJr	SINE,Alu
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	161559407	A	G	0.00376	FCGR2C	+	FALSE
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr20	25428384	A	G	0.00195	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	208619699	A	G	0.00741	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	46075663	A	G	0.00240	NASP	+	TRUE	AluSx4	SINE,Alu
chr11	8709315	A	G	0.00307	RPL27A	+	TRUE	AluYk2	SINE,Alu
chr7	128142833	A	G	6.82570E-05	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr1	3697486	C	G	0.00110	LRRC47	-	FALSE	AluSc	SINE,Alu
chr1	10520331	C	T	0.00060		.	FALSE	AluSx1	SINE,Alu
chr9	136209402	A	G	0.00431	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr3	73116345	T	A	5.66390E-05	PPP4R2	+	FALSE
chr1	45244433	G	A	0.00060		.	FALSE
chrX	133930368	T	G	0.00126	FAM122B	-	FALSE	G-rich	SINE,Alu
chr3	156259308	T	C	0.00013	SSR3	-	TRUE	AluSq2	SINE,Alu
chr9	132268442	A	G	0.00642	LINC00963	+	TRUE	AluJb	SINE,Alu
chr7	99006740	G	A	0.00269	BUD31	+	FALSE
chr1	19543282	T	C	0.00228	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	144607285	A	C	0.00208	NBPF20	+	FALSE
chr1	67874689	T	C	0.00338	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	36068237	T	C	0.00054	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	26158906	C	A	0.00362	MTFR1L,AUNIP	+,-	FALSE
chr10	117823569	G	A	0.00391	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr19	59093999	A	G	0.00018	CENPBD1P1	+	TRUE	AluY	SINE,Alu
chr15	42860107	A	G	0.00194	HAUS2	+	TRUE	AluSg	SINE,Alu
chr14	50792966	A	T	0.00852		.	FALSE	AluSx	SINE,Alu
chr2	75787917	G	C	0.00766	EVA1A	-	FALSE
chr1	53288974	A	T	0.00265	ZYG11B	+	FALSE	AluJo	SINE,Alu
chr1	148753329	A	G	7.42327E-05		.	FALSE
chr1	47184539	C	T	0.00425	EFCAB14	-	FALSE
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr1	109419841	C	T	0.00057	GPSM2	+	FALSE
chr7	154796233	A	G	0.00545	PAXIP1-AS1	+	TRUE	AluSx3	SINE,Alu
chr2	242512138	A	G	9.62871E-05	BOK	+	FALSE
chr1	6651456	A	G	0.00614	KLHL21	-	FALSE
chr1	153720690	G	A	0.00550	INTS3	+	FALSE
chr2	74334790	A	G	0.00870	TET3	+	FALSE
chr1	2522392	G	A	0.00227	FAM213B,MMEL1	+,-	FALSE
chr7	17384354	A	G	0.00908	AHR	+	TRUE	AluSx	SINE,Alu
chr10	126677250	G	T	0.00762	CTBP2	-	FALSE
chr2	99813003	A	G	2.46688E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	788840	T	C	0.00415	LINC01128	+	FALSE
chr2	128060040	T	C	0.00494	MAP3K2	-	FALSE	(CA)n	SINE,Alu
chr14	53242639	T	C	1.43651E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	10519932	T	C	0.00547		.	FALSE	AluJr	SINE,Alu
chr3	45721989	A	G	0.00713	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr10	88951001	G	A	0.00033	FAM35A	+	FALSE
chr7	6063466	T	A	0.00153	EIF2AK1	-	FALSE
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr2	99812414	A	G	9.82924E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	36024788	C	T	5.60663E-14	NCDN	+	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr6	42855957	A	G	0.00107	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	28662186	A	G	0.00403	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	16890176	A	C	0.00753	NBPF1	-	FALSE
chr1	22854931	C	A	7.08508E-09	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr1	178444613	T	G	0.00630	RASAL2	+	FALSE
chr1	148577409	C	A	0.00897	NBPF15	+	FALSE
chr1	3371368	C	G	0.00689	ARHGEF16	+	FALSE
chr4	7764017	T	C	0.00028	AFAP1,AFAP1-AS1	+,-	FALSE
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr1	16939857	C	T	0.00542	NBPF1	-	FALSE
chr7	48146088	A	G	0.00825	UPP1	+	TRUE	AluSq	SINE,Alu
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	932005	A	G	0.00110		.	FALSE
chr9	125609938	A	T	0.00904		.	FALSE
chr12	993930	C	T	0.00163	WNK1	+	FALSE
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	205687354	T	C	0.00012	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	206566195	C	T	0.00052	SRGAP2	+	FALSE
chr9	128729384	G	C	0.00059	PBX3	+	FALSE
chr6	42857179	C	A	0.00492	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr16	58195430	G	C	0.00325	CSNK2A2	-	FALSE	(AC)n	SINE,Alu
chr7	44841791	C	T	0.00182	PPIA	+	FALSE
chr2	143638992	T	A	0.00089	KYNU	+	FALSE

RBP	SMARCA4
Knock-Method	CRISPRi
RBP Family	BRK
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR126GEQ
Platform	HiSeq
Pubmed ID	32252787

SMARCA4 - Target Gene Network