RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr7	6064015	A	T	0.00746	EIF2AK1	-	FALSE
chr3	195243002	C	A	0.00358	PPP1R2	-	FALSE
chrX	151140335	G	C	0.00136	GABRE	-	FALSE	(GT)n	SINE,Alu
chr2	101622883	T	A	0.00440	RPL31	+	FALSE
chr1	11181327	C	T	0.00573	MTOR	-	FALSE
chr1	5937327	C	T	0.00703	NPHP4	-	FALSE
chr5	149363414	A	G	0.00458	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr5	130537933	A	G	0.00084	LYRM7	+	TRUE	AluSp	SINE,Alu
chr16	75479377	T	C	0.00639	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr22	17129526	A	G	0.00485	TPTEP1	+	TRUE	AluSz	SINE,Alu
chr1	40213412	A	G	0.00235	PPIE	+	TRUE	AluSx3	SINE,Alu
chr2	99812414	A	G	9.82924E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	145513114	A	G	0.00033	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	35816903	C	T	0.00174	ZMYM4	+	FALSE
chr1	220231946	T	C	0.00439	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr5	37288767	T	C	0.00928		.	FALSE	FLAM_C	SINE,Alu
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr1	179044212	A	G	7.62870E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	143135057	G	A	0.00403	LOC102723769	-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr1	567783	T	C	0.00427	MIR6723	-	FALSE
chr1	119574537	G	A	0.00935	WARS2	-	FALSE
chr19	42375586	A	G	0.00404		.	FALSE	AluSx	SINE,Alu
chr15	33064148	T	C	1.59288E-05	FMN1	-	FALSE
chr1	20826781	C	T	9.86003E-06	MUL1	-	FALSE
chr3	122283287	T	C	8.96368E-06	DTX3L,PARP9	+,-	FALSE
chr21	40195059	A	G	0.00817	ETS2	+	FALSE
chr5	150827303	T	G	0.00718	SLC36A1	+	FALSE
chr3	86993604	G	T	0.00195	VGLL3	-	FALSE	AluJo	SINE,Alu
chr1	6282318	T	C	0.00418	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	118502767	G	A	0.00624	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr7	44917405	C	T	0.00024	PURB	-	FALSE	AluSz	SINE,Alu
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr1	20976023	T	C	1.28334E-05	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr1	19428086	G	T	0.00449	UBR4	-	FALSE
chr1	144874815	T	C	0.00701	NBPF20,PDE4DIP	+,-	FALSE
chr5	121362874	A	G	0.00607	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr1	33149414	A	G	0.00722	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr2	101622887	G	A	0.00711	RPL31	+	FALSE
chr12	98942643	A	G	3.59360E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	145284132	G	A	0.00338	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	168218522	A	G	0.00073		.	FALSE	AluSz	SINE,Alu
chr3	181430141	G	C	0.00086	SOX2-OT,SOX2	+	FALSE
chr3	42826041	T	G	5.78537E-12	HIGD1A	-	FALSE
chr7	130629624	T	C	0.00435	LINC-PINT	-	TRUE
chr1	54493197	T	C	0.00148	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr1	110207639	T	A	0.00080	GSTM4	+	FALSE
chr2	206986245	T	C	0.00979		.	FALSE	AluSz	SINE,Alu
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chr1	29443675	T	C	0.00190	EPB41	+	FALSE
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr11	118965479	G	A	0.00682	H2AFX	-	FALSE	G-rich	SINE,Alu
chr5	68850966	G	T	0.00134	OCLN	+	FALSE	AluSx4	SINE,Alu
chr1	21100856	A	C	0.00010	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	6282420	T	C	0.00133	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	10519975	T	C	5.61936E-05		.	FALSE	AluJr	SINE,Alu
chr3	4403260	C	T	0.00603	SUMF1	-	FALSE
chr5	75469427	G	A	0.00155	SV2C	+	FALSE
chr1	205583610	T	C	0.00070	ELK4	-	FALSE
chr1	3545186	T	G	0.00314	TPRG1L	+	FALSE
chr16	53525857	A	G	0.00093	AKTIP	-	FALSE
chr1	6282237	T	C	0.00395	ICMT	-	TRUE	AluSz	SINE,Alu
chr15	90819655	A	G	0.00174		.	FALSE	AluSx	SINE,Alu
chr1	31405707	G	T	0.00431	PUM1	-	FALSE
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr1	204521631	A	G	0.00024	MDM4	+	TRUE	AluSg	SINE,Alu
chr16	66765441	G	T	4.44089E-16	DYNC1LI2	-	FALSE	L2c	SINE,Alu
chr1	36534830	A	G	0.00470		.	FALSE	AluJo	SINE,Alu
chr3	45722253	A	G	0.00663	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	19543282	T	C	0.00228	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr15	63111739	T	C	0.00914	TLN2	+	FALSE
chr9	132266648	A	G	0.00230	LINC00963	+	TRUE	AluSx	SINE,Alu
chr1	148251952	C	A	0.00905	NBPF8,NBPF14,NBPF9	-	FALSE
chr7	4809333	A	G	0.00067	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr1	28261662	A	G	0.01000	SMPDL3B	+	FALSE
chr3	47386061	A	C	8.10198E-06	KLHL18	+	FALSE
chr1	28836900	A	G	0.00311	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	207942456	A	G	0.00322	CD46	+	TRUE	AluSg4	SINE,Alu
chr3	58306686	A	G	0.00970		.	FALSE	AluSz	SINE,Alu
chr5	118174733	T	C	0.00037	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	179045672	G	A	0.00411	FAM20B	+	FALSE
chr22	36677551	T	C	7.06365E-05	MYH9	-	FALSE
chr1	145689271	A	G	0.00250	NBPF20,NBPF10	+	FALSE
chr1	9161357	T	C	0.00739		.	FALSE	AluSx	SINE,Alu
chr12	51325349	C	G	0.00225	METTL7A	+	FALSE	AluSq2	SINE,Alu
chr3	47125385	G	A	0.00496	SETD2	-	FALSE
chr1	89649522	T	C	0.00358	GBP4	-	TRUE	AluJb	SINE,Alu
chr7	65618870	A	G	0.00097	CRCP	+	TRUE	AluSx3	SINE,Alu
chr4	17804879	T	C	0.00863	DCAF16	-	TRUE	AluSx	SINE,Alu
chr7	65619243	A	G	9.04168E-05	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	326500	A	G	0.00189		.	FALSE
chr7	29960211	C	A	0.00034	SCRN1	-	FALSE
chr1	16957414	C	T	0.00116		.	FALSE
chr3	179115697	T	C	3.71610E-05	GNB4	-	TRUE	AluSg7	SINE,Alu
chr1	33148196	A	G	0.00054	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr2	217123958	T	C	0.00012	MARCH4	-	FALSE
chr2	206987136	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr1	28825486	A	G	0.00049	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr1	43748051	A	G	0.00489	C1orf210	-	FALSE	L2c	SINE,Alu
chr1	23631625	A	G	0.00536	HNRNPR	-	FALSE	UCON44	SINE,Alu
chr16	15219677	A	G	0.00136	PDXDC1,PKD1P6-NPIPP1	+,-	FALSE
chr4	17803537	T	C	7.44979E-05	DCAF16	-	TRUE	AluY	SINE,Alu
chr16	48387296	A	G	0.00058	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr2	188330323	T	G	0.00162	TFPI	-	FALSE	L2	SINE,Alu
chr12	54634306	T	C	0.00616	CBX5	-	TRUE	AluJr	SINE,Alu
chr2	9629954	T	C	0.00802	ADAM17	-	FALSE
chr1	118167515	C	T	2.81283E-05	FAM46C	+	FALSE
chr7	79848337	G	A	0.00037	GNAI1	+	FALSE
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr4	153898334	A	G	0.00662	FHDC1	+	FALSE	AluJo	SINE,Alu
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr1	156565057	T	C	0.00423	GPATCH4	-	FALSE
chr1	51820588	G	A	0.00807	EPS15	-	FALSE
chr1	36752811	C	T	2.19602E-12	THRAP3	+	FALSE
chr1	28261658	T	G	0.00280	SMPDL3B	+	FALSE
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr2	72403387	C	A	0.00486	EXOC6B	-	FALSE
chr4	186081819	C	T	3.85218E-06	CFAP97	-	FALSE
chr3	45721891	A	G	0.00356	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr6	42857028	A	G	0.00064	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr2	55462747	T	A	0.00163	RPS27A	+	FALSE
chr6	107113953	C	G	0.00300	QRSL1	+	FALSE	AluSg	SINE,Alu
chr1	85647107	T	C	0.00255	SYDE2	-	TRUE	AluSx	SINE,Alu
chr1	209602381	G	A	0.00057	MIR205HG	+	FALSE	AluJb	SINE,Alu
chr6	132617374	C	G	0.00062	MOXD1	-	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr1	95362514	G	T	0.00658	CNN3	-	FALSE
chr6	52226984	G	A	0.00127	PAQR8	+	FALSE	(GCTCGG)n	SINE,Alu
chr1	204526727	A	G	0.00033	MDM4	+	TRUE	AluSx	SINE,Alu
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr15	40954864	A	G	0.00636	KNL1	+	TRUE
chr5	56177846	G	C	0.00952	MAP3K1	+	FALSE
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	32373838	T	G	0.00376	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr16	81744038	T	C	6.34278E-05	CMIP	+	FALSE	(CCGC)n	SINE,Alu
chr1	6259025	C	T	0.00700	RPL22	-	FALSE
chr5	37290496	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr1	214525603	A	G	0.00047	PTPN14	-	FALSE
chr1	117617705	A	G	0.00031	TTF2	+	FALSE
chr1	22186113	T	G	0.00083	HSPG2	-	FALSE
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr6	74133990	T	C	0.00201		.	FALSE	AluY	SINE,Alu
chr1	10093749	T	C	0.00521	UBE4B	+	FALSE
chr9	89627063	A	G	0.00614	LOC440173	-	FALSE
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr1	900719	T	A	0.00436	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	193222534	G	T	0.00504	CDC73	+	FALSE	(TGT)n	SINE,Alu
chr1	78184325	A	G	0.00150	USP33	-	FALSE
chr1	113672569	A	G	0.00742		.	FALSE	AluJb	SINE,Alu
chr1	67874859	T	C	0.00027	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	713710	G	C	0.00448	LOC100288069	-	FALSE	FRAM	SINE,Alu
chr1	3545204	C	G	0.00829	TPRG1L	+	FALSE
chr6	54805688	A	C	0.00220	FAM83B	+	FALSE
chr1	237065326	C	T	0.00376	MTR	+	FALSE
chr1	108742123	C	G	1.29742E-06	SLC25A24	-	FALSE
chr2	118854086	G	C	0.00066	INSIG2	+	FALSE
chr15	41597669	A	G	0.00087		.	FALSE	AluSz6	SINE,Alu
chr4	113198883	G	T	0.00905	TIFA	-	FALSE
chr3	196670086	T	G	1.91816E-05	NCBP2-AS2	+	FALSE
chr1	10521130	T	C	0.00807	DFFA	-	TRUE	AluY	SINE,Alu
chr1	11979809	A	C	0.00525	KIAA2013	-	FALSE
chr3	158547143	G	A	0.00178	MFSD1	+	FALSE
chr7	65618249	A	G	0.00785	CRCP	+	TRUE	AluSp	SINE,Alu
chr1	115119377	A	T	0.00157	BCAS2	-	FALSE
chr1	53290057	A	G	0.00142	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	11783106	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr7	5410425	G	C	0.00043	TNRC18	-	FALSE	(CACCGC)n	SINE,Alu
chr1	1650801	T	C	1.21097E-05	CDK11B,CDK11A	-	FALSE
chr1	144931101	G	A	0.00012	NBPF20,PDE4DIP	+,-	FALSE
chr9	125866242	T	G	0.00988	RABGAP1	+	FALSE	(TG)n	SINE,Alu
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr19	17535871	A	C	0.00948	MVB12A	+	FALSE
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr7	44841238	T	A	0.00108	PPIA	+	FALSE
chr1	36068184	T	C	0.00150	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	113370193	C	T	4.09251E-05	USF3	-	FALSE	UCON34	SINE,Alu
chr1	16952481	A	G	5.15865E-05	CROCCP2	-	FALSE
chr1	110136321	T	A	0.00721	GNAI3	+	FALSE
chr4	39552070	T	C	0.00068	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	161928771	G	A	0.00294	ATF6	+	FALSE
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chr3	120128940	A	G	0.00434	FSTL1	-	FALSE
chr1	225611661	C	T	0.00113	LBR	-	FALSE
chr7	99017241	C	A	0.00721	PTCD1,ATP5J2-PTCD1	-	FALSE
chr16	9200168	A	T	0.00908	C16orf72	+	FALSE	AluSx1	SINE,Alu
chr1	33149496	A	G	0.00469	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	218696215	A	G	0.00915	TNS1	-	FALSE
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr1	10520764	T	C	0.00542	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	26143725	A	T	0.00116	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	20977380	T	C	0.00695	PINK1,PINK1-AS	+,-	FALSE
chr7	6694922	G	C	0.00996	ZNF316	+	FALSE
chr5	205565	G	A	0.00593	CCDC127	-	FALSE
chr1	36534784	A	G	0.00369		.	FALSE	AluJo	SINE,Alu
chr7	6695426	G	T	0.00893	ZNF316	+	FALSE
chr18	47918818	A	G	3.50049E-05	SKA1	+	TRUE	AluJb	SINE,Alu
chr1	16918502	A	G	0.00098	NBPF1	-	FALSE
chr15	41590973	A	G	1.61675E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	10520174	T	C	0.00413		.	FALSE	AluSx	SINE,Alu
chr5	76372541	G	C	0.00498	ZBED3	-	FALSE
chr7	105162638	G	C	0.00155	PUS7	-	FALSE
chr10	126677249	A	T	0.00762	CTBP2	-	FALSE
chr1	115299508	A	T	0.00070	CSDE1	-	FALSE
chr2	37327670	T	C	0.00021		.	FALSE
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr3	128339057	A	T	0.00535	RPN1	-	FALSE	(A)n	SINE,Alu
chr2	206987629	T	C	0.00491		.	FALSE	AluJb	SINE,Alu
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr4	39551976	T	C	0.00041	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr21	34728175	A	G	6.62284E-07	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr2	27887286	G	A	0.00404	SLC4A1AP	+	FALSE
chr1	229762054	T	A	0.00084	URB2	+	FALSE
chr7	128607384	G	A	0.00925	TNPO3	-	FALSE
chr2	152334349	A	G	0.00171		.	FALSE	AluSq	SINE,Alu
chr2	174090321	C	A	0.00563	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	145688973	A	G	8.24717E-05	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr4	120979187	T	C	0.00046		.	FALSE	AluSg4	SINE,Alu
chr1	145513016	A	G	0.00400	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	28662186	A	G	8.22643E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	204301760	C	T	0.00313	RAPH1	-	FALSE
chr7	30634661	C	G	3.93145E-07	GARS	+	FALSE
chr1	145695329	A	G	0.00400	NBPF20,NBPF10	+	FALSE	AluSz	SINE,Alu
chr1	145284175	G	C	0.00562	NBPF20,NOTCH2NL	+	FALSE
chr1	56961756	A	G	0.00682	PLPP3	-	FALSE
chr1	100548868	T	C	8.06321E-05	MFSD14A	+	FALSE
chr1	87328403	A	T	0.00235	SEP15	-	FALSE
chr4	39550612	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr15	38643574	T	C	0.00455	SPRED1	+	FALSE
chr1	16889620	T	C	0.00884	NBPF1	-	FALSE
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	16889864	C	A	0.00063	NBPF1	-	FALSE
chr1	26608021	T	A	0.00069		.	FALSE
chr1	197070776	C	T	0.00698	ASPM	-	FALSE
chr3	156258230	T	C	0.00176	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	37331269	T	C	0.00781		.	FALSE	AluSx1	SINE,Alu
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr1	36067838	T	C	0.00081	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	93827764	A	G	0.00098	DR1	+	FALSE
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr6	31324643	G	C	5.95617E-06		.	FALSE
chr20	36147563	T	C	0.00313	BLCAP	-	TRUE
chr1	16889985	T	C	0.00583	NBPF1	-	FALSE
chr2	174090338	A	C	0.00250	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr17	78091513	G	A	0.00810	GAA	+	FALSE
chr1	10517513	T	C	0.00088		.	FALSE	AluSx1	SINE,Alu
chr1	9162456	T	C	0.00043		.	FALSE	AluSx	SINE,Alu
chr13	52327020	G	A	0.00019	WDFY2	+	FALSE
chr12	120898728	A	G	0.00566	GATC	+	TRUE	AluY	SINE,Alu
chr14	52906081	T	G	0.00602	TXNDC16	-	FALSE
chr4	103809328	G	T	0.00284	CISD2,SLC9B1	+,-	FALSE
chr2	61277775	A	G	0.00113	PEX13	+	TRUE	AluY	SINE,Alu
chr1	29446554	C	A	0.00682	EPB41,TMEM200B	+,-	FALSE
chr4	57326131	A	G	0.00164	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	8996326	C	T	0.00077	MBOAT2	-	FALSE
chr1	153914500	G	A	3.11507E-05	DENND4B	-	FALSE
chr9	131093336	T	C	0.00397	COQ4	+	FALSE	AluY	SINE,Alu
chr1	45976257	C	A	0.00015	MMACHC	+	FALSE
chr1	180169330	C	T	0.00374	FLJ23867	+	FALSE	MIR	SINE,Alu
chr5	130536797	A	G	0.00841	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr1	114940228	C	T	0.00127	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	14986104	T	C	0.00621	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	19542458	T	C	0.00988	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	44088547	C	A	0.00927	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	1663957	C	T	0.00345	SLC35E2	-	FALSE
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr4	99801986	C	A	0.00687	EIF4E	-	FALSE
chr18	2763697	C	T	8.35636E-08	SMCHD1	+	FALSE
chr2	216903620	T	C	0.00623	PECR	-	TRUE	AluSx3	SINE,Alu
chr20	25427865	A	G	0.00018	GINS1	+	FALSE	AluSz	SINE,Alu
chr7	17384437	A	G	0.00192	AHR	+	TRUE	AluSx	SINE,Alu
chr7	2274209	T	C	0.00578	MRM2	-	FALSE	AluJr	SINE,Alu
chr1	36068325	T	C	5.92205E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr12	133298938	A	G	0.00034	PGAM5	+	TRUE	AluSg	SINE,Alu
chr1	95363041	C	T	0.00105	CNN3	-	FALSE
chr5	96368471	G	T	3.92809E-06		.	FALSE
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	40219065	C	T	0.00232	PPIE	+	FALSE
chr1	16892279	C	A	0.00326	NBPF1	-	FALSE
chr19	53914819	A	G	5.13713E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	172580637	T	C	1.47330E-06	SUCO	+	FALSE
chr3	157161198	A	T	0.00486	VEPH1,PTX3	+,-	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr1	40537940	A	C	0.00155	CAP1	+	FALSE	(A)n	SINE,Alu
chr2	206987725	T	C	0.00625		.	FALSE	AluJb	SINE,Alu
chr3	49395692	G	A	0.00049	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr1	1344893	A	G	0.00186		.	FALSE	AluSg	SINE,Alu
chr1	155853219	A	G	0.00520	SYT11	+	TRUE	AluJb	SINE,Alu
chr1	181057918	C	G	0.00961	IER5	+	FALSE
chr6	4995431	C	T	0.00449	RPP40	-	FALSE
chr19	59095469	A	G	5.44182E-05	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr12	98942824	A	G	2.17067E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr6	29910557	T	A	0.00196		.	FALSE
chr1	27204447	T	C	0.00513		.	FALSE	AluSg7	SINE,Alu
chr1	19542679	T	C	0.00575	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	74672474	G	A	0.00441	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	144607387	G	C	0.00016	NBPF20	+	FALSE
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	19586455	A	G	0.00772	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	163116048	G	T	3.38683E-05	RGS5	-	FALSE
chr1	28836048	G	A	0.00035	SNHG3,RCC1	+	FALSE	AluSx4	SINE,Alu
chr1	236748403	G	C	0.00519	HEATR1	-	FALSE
chr2	37331525	T	C	0.00140		.	FALSE	AluJb	SINE,Alu
chr1	169768080	C	A	0.00857	C1orf112	+	FALSE
chr1	46075663	A	G	0.00068	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr19	21302045	A	G	0.00020	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr1	36770621	G	T	0.00424	THRAP3	+	FALSE	(T)n	SINE,Alu
chr14	50053316	T	C	0.00115		.	FALSE	7SLRNA	SINE,Alu
chr15	64657530	T	C	0.00580	KIAA0101	-	TRUE	FLAM_C	SINE,Alu
chr1	949608	G	A	0.00416	ISG15	+	FALSE
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr12	125513906	C	A	0.00464		.	FALSE	AluSx1	SINE,Alu
chr4	26432834	G	A	0.00167	RBPJ	+	FALSE	(A)n	SINE,Alu
chr21	34729931	A	G	0.00040	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	19934880	T	C	0.00456	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	19542679	T	C	0.00738	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr1	151027536	G	C	0.00518	CDC42SE1	-	FALSE
chr1	10044272	A	G	0.00737	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr7	44918772	T	C	0.00026	PURB	-	FALSE	AluSg	SINE,Alu
chr2	101622888	T	A	7.56266E-05	RPL31	+	FALSE
chr5	134236311	A	T	0.00025	TXNDC15	+	FALSE	AluSq	SINE,Alu
chr1	144931727	G	A	4.04936E-05	NBPF20,PDE4DIP	+,-	FALSE
chr8	94744813	C	T	5.22032E-05	RBM12B	-	FALSE
chr1	6662500	C	G	0.00235	KLHL21	-	FALSE
chr10	120801785	T	A	0.00665	EIF3A	-	FALSE
chr3	48787094	T	C	0.00518	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr12	125511226	A	G	0.00205	THRIL	-	FALSE	AluSx1	SINE,Alu
chr3	58292297	T	C	0.00950	RPP14	+	FALSE
chr1	46075715	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr10	99504630	G	T	0.00544	ZFYVE27	+	FALSE
chr6	41567394	T	A	0.00717	FOXP4	+	FALSE
chr18	29410068	C	T	0.00807	TRAPPC8	-	FALSE
chr1	144813815	A	G	2.28281E-05	NBPF20,NBPF9	+	FALSE
chr4	160279820	C	T	0.00354	RAPGEF2	+	FALSE
chr6	18264355	G	A	0.00872	DEK	-	FALSE
chr3	16301148	T	C	0.00050	DPH3	-	FALSE
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr1	145693061	A	G	0.00158	NBPF20,NBPF10	+	TRUE	AluSz6	SINE,Alu
chr1	145688961	A	G	0.00324	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	38174366	G	T	0.00879	CDCA8	+	FALSE
chr1	10518821	T	C	0.00913		.	FALSE	AluSx1	SINE,Alu
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr1	89271574	T	C	3.83690E-05	PKN2	+	FALSE
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	46075191	C	A	0.00457	NASP	+	FALSE	A-rich	SINE,Alu
chr4	3514695	A	G	1.35580E-12	LRPAP1	-	FALSE
chr3	49763338	T	C	2.41941E-06	IP6K1	-	FALSE
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr1	33145978	A	T	0.00288	SYNC,RBBP4	+,-	FALSE
chr1	145369706	T	C	0.00186	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr3	48786991	T	C	0.00584	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr8	30536606	T	C	9.30891E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr1	78414310	C	A	0.00131	FUBP1	-	FALSE
chr1	144606996	G	C	0.00107	NBPF20	+	FALSE
chr1	10521126	T	C	0.00560	DFFA	-	TRUE	AluY	SINE,Alu
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr1	31905889	A	G	0.00565	SERINC2	+	FALSE
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	43917637	G	A	0.00164	SZT2,HYI	+,-	FALSE
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr7	924639	A	G	0.00285	GET4	+	TRUE	AluJb	SINE,Alu
chr4	71682381	T	C	0.00037	GRSF1	-	TRUE	AluSz6	SINE,Alu
chr2	33812352	A	G	0.00223	FAM98A	-	FALSE
chr16	5134599	G	C	0.00355	ALG1,EEF2KMT	+,-	FALSE
chr1	146629399	G	T	0.00611	PRKAB2	-	FALSE
chr1	26143727	A	T	0.00917	SEPN1	+	FALSE	AluSx	SINE,Alu
chr8	26492397	C	T	0.00709	DPYSL2	+	FALSE
chr1	28662186	A	G	0.00403	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	86852362	C	A	0.00073	ODF2L	-	FALSE	AluSz	SINE,Alu
chr1	204524914	A	G	0.00766	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr6	44417835	A	G	8.27091E-07	CDC5L	+	TRUE	AluSx	SINE,Alu
chr5	203683	G	T	0.00399		.	FALSE	MIRb	SINE,Alu
chr1	33148214	A	G	0.00734	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	16889044	T	A	0.00256	NBPF1	-	FALSE
chr1	40537941	A	C	0.00627	CAP1	+	FALSE	(A)n	SINE,Alu
chr7	100278998	C	A	0.00022	GIGYF1	-	FALSE	(A)n	SINE,Alu
chr3	45721874	A	G	0.00296	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	36067811	T	C	0.00439	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	150783955	T	C	0.00077	ARNT	-	FALSE	(CA)n	SINE,Alu
chr1	54493443	C	A	0.00872	TMEM59	-	FALSE	AluSz6	SINE,Alu
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr10	15120179	T	C	3.12210E-06	ACBD7	-	FALSE	L1PA7	SINE,Alu
chr2	216300795	C	G	0.00641		.	FALSE
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr14	53243394	T	C	0.00957	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	10517486	T	C	0.00626		.	FALSE	AluSx1	SINE,Alu
chr1	121133770	A	G	0.00295	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	87209658	G	A	0.00219	SH3GLB1	+	FALSE
chr12	9395329	G	A	0.00814	LINC00987	+	FALSE
chr1	46049716	T	G	0.00761	NASP	+	FALSE
chr1	145281408	C	T	0.00220	NBPF20,NOTCH2NL	+	FALSE
chr6	42856924	A	G	2.08684E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	900721	T	C	0.00109	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr6	160211656	G	T	0.00339	MRPL18	+	FALSE
chr2	99812450	A	G	7.07141E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr2	11966317	T	C	0.00011	LPIN1	+	FALSE
chr1	31732603	A	C	0.00148	SNRNP40	-	FALSE
chr7	130629624	T	C	0.00568	LINC-PINT	-	TRUE
chr8	41399648	A	G	0.00037	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr1	10517276	T	C	0.00079		.	FALSE	AluJr	SINE,Alu
chr1	33149486	A	G	5.00374E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	120114128	A	C	6.21214E-12	FSTL1	-	FALSE
chr2	91805833	A	G	1.63980E-13		.	FALSE	MLT1H1	SINE,Alu
chr1	26774225	A	G	0.00614	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	15993514	C	T	6.34808E-08		.	FALSE	AluSx4	SINE,Alu
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr5	134061334	A	G	0.00721	SEC24A	+	FALSE
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr3	196558328	A	G	1.33227E-14	PAK2	+	FALSE
chr1	62380298	G	A	0.00025	PATJ	+	FALSE
chr19	21302035	A	G	5.57890E-05	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	201846618	C	A	0.00404	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	110466466	T	C	0.00135	CSF1	+	FALSE
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	61922437	G	T	0.00359	NFIA	+	FALSE
chr1	28835934	A	G	0.00566	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	93297595	G	T	0.00479	RPL5	+	FALSE
chr1	70611296	A	T	0.00061	LRRC40	-	FALSE
chr1	22159774	G	A	0.00257	HSPG2	-	FALSE
chr1	46159823	T	A	0.00461	TMEM69	+	FALSE
chr3	172351006	C	G	6.14326E-06	NCEH1	-	FALSE
chr5	56177872	A	G	0.00618	MAP3K1	+	TRUE	(CAA)n	SINE,Alu
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr16	48388258	A	G	8.02686E-05	MIR5095	+	TRUE	AluSz	SINE,Alu
chr20	43707842	A	G	0.00100	STK4	+	TRUE	AluJb	SINE,Alu
chr2	206981796	T	C	0.00137		.	FALSE	AluJb	SINE,Alu
chr2	61764920	C	A	0.00363	XPO1	-	FALSE
chr1	108113839	T	C	0.00027	VAV3	-	FALSE
chr4	190883001	C	G	0.00859	FRG1	+	FALSE
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr1	149818472	T	C	0.00131		.	FALSE	MLT1D	SINE,Alu
chr4	10447986	T	A	0.00077	ZNF518B	-	FALSE
chr2	37327666	T	C	0.00231		.	FALSE
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr3	195243007	A	C	3.91570E-06	PPP1R2	-	FALSE
chr2	217366919	A	G	0.00197		.	FALSE	AluSz6	SINE,Alu
chr2	70452144	T	G	0.00191	TIA1	-	FALSE
chr3	69104669	C	T	0.00113	UBA3	-	FALSE
chr14	74526945	T	C	2.53258E-07	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	93827990	C	A	0.00517	DR1	+	FALSE
chr1	32801745	A	G	0.00357	MARCKSL1	-	FALSE
chr1	100440553	A	G	0.00179	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr2	24227417	A	G	0.00831		.	FALSE	AluSc	SINE,Alu
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	207942527	A	T	0.00107	KLF7	-	FALSE
chr5	40832557	G	T	0.00024	RPL37	-	FALSE
chr15	41593269	A	G	0.00196		.	FALSE	AluSz6	SINE,Alu
chr8	95804469	A	G	0.00133	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr15	91044385	G	T	0.00440	IQGAP1	+	FALSE
chr2	239360542	C	A	0.00989	ASB1	+	FALSE
chr1	120164252	G	A	0.00139	ZNF697	-	FALSE
chr1	36068276	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr20	35520935	T	C	0.00120	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr2	132049924	A	G	0.00338	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr4	248713	A	G	0.00367	ZNF876P	+	FALSE
chr1	113001409	C	T	2.24539E-06	CTTNBP2NL	+	FALSE	AluJr	SINE,Alu

RBP	FXR2
Knock-Method	shRNA
RBP Family	FXMRP1_C_core
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR139BIJ
Platform	HiSeq
Pubmed ID	32252787

FXR2 - Target Gene Network