RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr12	125511226	A	G	0.00205	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr12	56510697	G	A	0.00055	RPL41	+	FALSE
chr13	76378459	T	C	0.00239	LMO7	+	FALSE
chr1	10520532	T	C	0.00150		.	FALSE	AluSx1	SINE,Alu
chr2	217366534	A	G	0.00700		.	FALSE	AluSz	SINE,Alu
chr2	88327464	C	T	0.00046	KRCC1	-	FALSE
chr1	11814631	A	G	5.11326E-05		.	FALSE
chr14	64152516	T	C	0.00011	SGPP1	-	FALSE	(TA)n	SINE,Alu
chr1	151742798	T	C	0.00626	OAZ3	+	FALSE
chr1	145313405	C	T	0.00322	NBPF20,NBPF10	+	FALSE
chr1	100548868	T	C	0.00114	MFSD14A	+	FALSE
chr4	2516790	G	T	0.00141	RNF4	+	FALSE
chr1	16932968	G	A	0.00074	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr6	28873868	T	C	0.00041		.	FALSE	AluJo	SINE,Alu
chr10	79570873	G	T	0.00292	DLG5	-	FALSE
chr3	14985983	A	T	6.81677E-14	FGD5-AS1	-	FALSE
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr4	39550739	T	C	0.00231	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr1	20809386	T	G	0.00561	CAMK2N1	-	FALSE
chr1	145512074	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	142619487	A	G	0.00511		.	FALSE
chr19	4423352	G	A	0.00087	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr17	73886212	T	C	0.00724	TRIM65	-	TRUE	FRAM	SINE,Alu
chr19	53914411	A	G	8.16883E-05	ZNF765	+	TRUE	AluSx	SINE,Alu
chr3	119543179	C	A	0.00992	GSK3B	-	FALSE	(CA)n	SINE,Alu
chr1	154987526	C	T	0.00043	ZBTB7B	+	FALSE
chr1	2115914	G	T	0.00970	PRKCZ,FAAP20	+,-	FALSE
chr1	1647871	T	C	0.00906	CDK11B,CDK11A	-	FALSE
chr5	34906156	T	C	2.52494E-05	RAD1	-	TRUE	AluSx1	SINE,Alu
chr3	20195395	C	T	3.65176E-06	KAT2B	+	FALSE
chr11	63724398	T	C	0.00664	NAA40	+	FALSE	AluSx	SINE,Alu
chr14	53109732	T	C	0.00013	ERO1A	-	TRUE	MER53	SINE,Alu
chr3	195404649	A	G	0.00624	SDHAP2	+	FALSE
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	196046746	T	C	0.00513	TM4SF19-TCTEX1D2,TM4SF19-AS1	+,-	FALSE	AluSc5	SINE,Alu
chr1	24286327	G	A	0.00053	PNRC2	+	FALSE
chr1	16890639	C	T	8.47214E-05	NBPF1	-	FALSE
chr8	104312341	A	G	0.00692	FZD6	+	FALSE
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr3	150345451	A	G	2.37481E-05	SELT	+	TRUE
chr1	36068278	T	C	0.00068	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	19586520	A	G	0.00659	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	114443582	A	G	0.00137	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	115119377	A	T	0.00157	BCAS2	-	FALSE
chr1	1647814	T	C	7.10450E-06	CDK11B,CDK11A	-	FALSE
chr3	179042910	A	G	0.00061	ZNF639	+	TRUE	AluSp	SINE,Alu
chr5	44826677	G	T	0.00941		.	FALSE	(T)n	SINE,Alu
chr19	21131571	A	G	0.00120	ZNF85	+	FALSE
chr1	11084103	T	A	0.00162	TARDBP	+	FALSE
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr14	69708241	G	A	0.00748	EXD2	+	FALSE
chr9	115447535	T	C	3.15593E-07	INIP	-	TRUE	AluJb	SINE,Alu
chr19	9673005	T	C	0.00017		.	FALSE	AluSx3	SINE,Alu
chr7	29963082	G	A	0.00118	SCRN1	-	FALSE
chr1	179813613	T	C	7.15786E-05	TOR1AIP2	-	FALSE
chr1	26802401	T	G	4.43852E-05	HMGN2	+	FALSE
chr1	143231313	G	A	0.00137		.	FALSE
chr1	180854773	A	G	0.00800	XPR1	+	FALSE
chr4	95586727	G	T	0.00996	PDLIM5	+	FALSE
chr7	6064015	A	T	0.00746	EIF2AK1	-	FALSE
chr7	128829066	A	G	0.00816	SMO	+	FALSE
chr21	34728095	A	G	8.47848E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr19	53997266	A	G	0.00173	ZNF813	+	FALSE	L1M3	SINE,Alu
chr4	39550570	T	C	0.00203	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr3	45722253	A	G	0.00670	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	204521616	A	G	4.81420E-06	MDM4	+	TRUE	AluSg	SINE,Alu
chr5	125961649	A	G	3.29658E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr4	120982045	T	C	0.00293	MAD2L1	-	FALSE
chr3	48787640	T	C	0.00463	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr14	68117864	A	T	0.00744	ARG2	+	FALSE
chr6	24719384	A	C	0.00215	C6orf62	-	FALSE	(A)n	SINE,Alu
chr2	219100706	A	G	0.00874	ARPC2	+	TRUE	AluSx1	SINE,Alu
chr1	58999651	T	G	0.00980	OMA1	-	FALSE
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	20976023	T	C	0.00889	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr20	25427856	A	G	0.00094	GINS1	+	FALSE	AluSz	SINE,Alu
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr12	120898661	A	G	2.17580E-05	GATC	+	TRUE	AluY	SINE,Alu
chr1	47844500	T	G	0.00596	CMPK1	+	FALSE
chr1	95363042	C	G	0.00110	CNN3	-	FALSE
chr4	57327092	A	G	0.00091	PAICS	+	TRUE	AluSx1	SINE,Alu
chr7	44918736	T	C	4.05417E-05	PURB	-	TRUE	AluSg	SINE,Alu
chr3	178954055	T	C	0.00308	PIK3CA	+	FALSE
chr1	9163334	T	C	0.00074		.	FALSE	AluSp	SINE,Alu
chr2	61316542	A	G	0.00033	KIAA1841	+	TRUE	AluSx1	SINE,Alu
chr1	220231484	T	C	0.00954	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	160966434	T	C	0.00175	F11R	-	TRUE	AluSg	SINE,Alu
chr2	217366626	A	G	0.00057		.	FALSE	AluSz	SINE,Alu
chr1	40306898	T	C	0.00384	TRIT1	-	FALSE
chr1	45975345	A	G	0.00273	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr17	41133087	A	G	0.00141	RUNDC1	+	FALSE
chr1	1650797	A	G	0.00325	CDK11B,CDK11A	-	FALSE
chr5	52388460	A	T	0.00034	ITGA2	+	FALSE
chr2	99812864	A	G	0.00458	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	195964298	A	G	0.00263		.	FALSE
chr1	145375869	G	A	0.00480	NBPF20,NBPF10	+	FALSE
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr9	14921850	A	G	0.00112		.	FALSE
chrX	77083538	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr3	194124421	A	G	0.00024	ATP13A3	-	FALSE
chr8	48890109	A	G	8.88178E-16	MCM4	+	TRUE	AluJb	SINE,Alu
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	121133998	T	A	0.00171	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr2	91805938	A	G	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr1	161088583	T	G	0.00745	NIT1	+	FALSE
chr1	11783776	C	A	0.00039		.	FALSE	AluSq	SINE,Alu
chr2	201735790	G	C	0.00671	PPIL3	-	FALSE
chr2	46839477	T	C	0.00033	PIGF	-	FALSE
chr1	143135166	G	T	0.00325	LOC102723769	-	FALSE
chr1	1361641	C	T	0.00928	TMEM88B	+	FALSE
chr1	36642420	T	C	0.00188	MAP7D1	+	FALSE
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr12	26809316	G	A	0.00150	ITPR2	-	FALSE
chr19	57804719	A	C	0.00361	ZNF460	+	FALSE
chr1	33148623	A	G	4.79591E-07	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	214529742	T	C	6.22071E-05	PTPN14	-	TRUE
chr1	65692498	T	C	0.00356	AK4	+	FALSE	(T)n	SINE,Alu
chr1	95392593	C	T	0.00173	CNN3	-	FALSE	(GGCGCG)n	SINE,Alu
chr3	5026730	T	C	0.00488	BHLHE40	+	FALSE
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr2	11318235	G	C	0.00911	PQLC3	+	FALSE
chr10	13320129	A	G	0.00830	PHYH	-	FALSE
chr15	41590999	A	G	0.00049	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr11	31452788	A	G	0.00239	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr1	150548883	A	C	0.00255	MCL1	-	FALSE
chr1	120695749	A	G	0.00130		.	FALSE
chr3	86994021	T	C	0.00705	VGLL3	-	FALSE
chr1	10519932	T	C	5.00916E-05		.	FALSE	AluJr	SINE,Alu
chr1	53289940	A	G	7.75582E-06	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	99812978	A	G	0.00475	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	6283260	T	C	0.00402	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16958833	T	A	0.00765		.	FALSE
chr1	146215138	A	G	0.00038	NBPF20,NBPF10,NBPF25P	+	FALSE
chr1	19542455	T	C	0.00263	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	2520435	G	C	0.00041	FAM213B	+	FALSE
chr2	209180073	C	A	0.00478	PIKFYVE	+	FALSE
chr5	139931634	T	G	6.28154E-05	SRA1	-	FALSE
chr1	26755291	A	G	0.00044	LIN28A	+	TRUE	AluSx1	SINE,Alu
chr1	95362949	A	T	0.00114	CNN3	-	FALSE	(A)n	SINE,Alu
chr1	1647814	T	C	8.49337E-05	CDK11B,CDK11A	-	FALSE
chr2	71412707	G	A	0.00305	PAIP2B	-	FALSE	AluJr	SINE,Alu
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr8	48890288	A	G	0.00210	MCM4	+	TRUE	AluJb	SINE,Alu
chr2	55452459	G	T	5.59903E-07	CLHC1	-	FALSE
chr6	31324705	A	C	0.00179		.	FALSE
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	77557891	T	C	0.00557	PIGK	-	FALSE
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr14	75202402	A	G	0.00141	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	45244053	A	G	0.00562	RPS8	+	FALSE
chr1	28662057	A	G	3.94650E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr2	20401856	T	G	0.00265	SDC1	-	FALSE
chr1	25554719	G	A	0.00403	SYF2	-	FALSE
chr1	21795388	A	G	0.00790	NBPF3	+	FALSE
chr1	10516656	C	T	0.00808		.	FALSE
chr1	145512925	A	G	0.00230	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	171850174	T	G	3.41223E-05	TLK1	-	FALSE
chr1	201438096	G	T	1.87636E-05	PHLDA3	-	FALSE
chr2	217366499	A	G	0.00063		.	FALSE	AluSz	SINE,Alu
chr3	53220215	G	A	2.78975E-05	PRKCD	+	FALSE
chr5	96110979	A	T	0.00020	ERAP1	-	FALSE
chr4	3076659	A	C	0.00401	HTT	+	FALSE	(CAG)n	SINE,Alu
chr5	79923292	C	G	0.00305	DHFR	-	FALSE	AluJr	SINE,Alu
chr2	3592638	T	C	0.00941	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	46078630	A	G	0.00131	NASP	+	FALSE
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr2	216225584	G	T	0.00848	FN1	-	FALSE
chr1	155695968	A	G	0.00017	DAP3	+	TRUE	AluSp	SINE,Alu
chr9	115447534	T	C	0.00203	INIP	-	TRUE	AluJb	SINE,Alu
chr9	34088029	C	T	0.00501	DCAF12	-	FALSE
chr3	10976876	A	G	0.00343	SLC6A11	+	FALSE
chr1	3546269	C	A	0.00260	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr2	191745655	C	G	0.00163	GLS	+	FALSE
chr1	143186597	G	A	0.00644	LOC102723769	-	FALSE
chr9	138798859	C	A	0.00291	CAMSAP1	-	FALSE
chr2	7181560	G	A	0.00599	RNF144A	+	FALSE
chr4	2940397	T	C	0.00010	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	1650787	T	C	0.00590	CDK11B,CDK11A	-	FALSE
chr20	35467713	G	A	0.00373	SOGA1	-	FALSE
chr3	10065426	C	T	0.00776	CIDECP	-	FALSE
chr16	10625058	T	C	2.66942E-12	EMP2	-	TRUE	AluSx3	SINE,Alu
chr4	25278988	T	C	2.09007E-08	PI4K2B	+	FALSE
chr20	35520976	T	C	0.00254	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr4	2940164	T	C	2.22609E-06	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	27204516	T	C	0.00028		.	FALSE	AluSg7	SINE,Alu
chr2	56150864	C	T	0.00615	EFEMP1	-	FALSE
chr1	160967817	T	C	0.00478	F11R	-	TRUE	AluSp	SINE,Alu
chr1	28825331	A	G	0.00563	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr4	41956413	C	T	0.00543	TMEM33	+	FALSE
chr1	204524555	A	G	1.07581E-05	MDM4	+	TRUE	AluY	SINE,Alu
chr1	15899630	T	C	0.00082	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chr14	24661017	G	T	0.00771	TM9SF1	-	FALSE
chr1	120839683	G	A	0.00875	FAM72B	+	FALSE
chr3	48787052	T	C	0.00631	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr14	74526952	T	C	0.00019	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr6	42856118	A	G	0.00743	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	23834008	A	C	0.00374	E2F2	-	FALSE	AluSz	SINE,Alu
chr16	48386442	A	G	0.00824	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	206516261	C	T	0.00020	SRGAP2	+	FALSE
chr7	158590740	A	T	0.00211	ESYT2	-	FALSE
chr2	207027628	A	G	0.00022	EEF1B2	+	FALSE
chr4	56298300	G	A	7.51019E-06	CLOCK	-	FALSE
chr3	99517483	C	T	0.00070	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr3	9519219	C	T	0.00146	SETD5	+	FALSE
chr3	196558328	A	G	1.33227E-14	PAK2	+	FALSE
chr3	120114953	G	A	0.00373	FSTL1	-	FALSE
chr1	150548881	G	A	9.52924E-05	MCL1	-	FALSE
chr1	1595078	T	C	0.00714	CDK11B,SLC35E2B	-	FALSE	AluSg	SINE,Alu
chr3	45721874	A	G	0.00296	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	569874	C	T	0.00076		.	FALSE
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr1	6704652	C	T	0.00000	DNAJC11	-	FALSE
chr1	16889413	T	C	1.64789E-05	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	17739586	G	A	0.00093	RCC2	-	FALSE
chr6	114182986	T	A	0.00316	MARCKS	+	FALSE
chr19	42731991	A	G	0.00598		.	FALSE	AluJr	SINE,Alu
chr2	37328097	T	C	3.71887E-07		.	FALSE
chr19	11945631	A	G	0.00091	ZNF440	+	TRUE	AluSp	SINE,Alu
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	27202845	T	C	0.00034		.	FALSE	AluSq2	SINE,Alu
chr1	32479707	G	A	0.00000	KHDRBS1	+	FALSE
chr1	145693060	A	G	2.60299E-05	NBPF20,NBPF10	+	TRUE	AluSz6	SINE,Alu
chr1	236208773	C	T	0.00722	NID1	-	FALSE
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr5	96366326	G	C	0.00120		.	FALSE	(TG)n	SINE,Alu
chr19	46053393	T	C	0.00514	OPA3	-	TRUE	AluSx1	SINE,Alu
chr1	16889127	A	G	0.00213	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr1	10520154	T	C	0.00380		.	FALSE	AluSx	SINE,Alu
chr16	23682631	C	T	0.00960	DCTN5	+	FALSE
chr13	110407598	A	G	0.00222	IRS2	-	FALSE
chr2	47387306	G	T	0.00026	CALM2	-	FALSE
chr19	65489	C	A	0.00494	WASH5P	-	FALSE	L2b	SINE,Alu
chr1	16892277	G	T	0.00164	NBPF1	-	FALSE
chr1	118502767	G	A	0.00624	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr3	39438321	A	T	6.25124E-06	SLC25A38	+	FALSE
chr2	44114074	G	A	0.00246	LRPPRC	-	FALSE	AluSz6	SINE,Alu
chr1	44035352	C	T	0.00055	PTPRF	+	FALSE
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr1	179044206	A	G	0.00458	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	44818526	C	G	0.00326	ERI3	-	FALSE
chr4	177251328	C	T	9.41230E-05	SPCS3	+	FALSE
chr9	33039686	G	A	0.00542	DNAJA1	+	FALSE
chr17	49041692	T	C	2.35976E-05	SPAG9	-	TRUE	AluSx	SINE,Alu
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr1	28826250	A	G	0.00489	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr14	23795219	C	T	0.00201	BCL2L2-PABPN1,PABPN1	+	FALSE
chr5	174956494	T	A	2.51545E-05	SFXN1	+	FALSE
chr1	145689601	A	G	0.00517	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr3	196670094	G	C	5.91401E-08	NCBP2-AS2	+	FALSE
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr1	10519951	T	C	0.00378		.	FALSE	AluJr	SINE,Alu
chr2	171849612	T	C	0.00364	TLK1	-	FALSE
chr19	42375586	A	G	0.00404		.	FALSE	AluSx	SINE,Alu
chr2	191829133	G	A	0.00097	GLS	+	FALSE
chr4	95173779	T	C	0.00771	SMARCAD1	+	FALSE
chr1	894378	T	A	0.00068	NOC2L	-	FALSE
chr19	45406537	T	C	0.00278	TOMM40	+	FALSE
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr5	55235866	T	A	0.00073	IL6ST	-	FALSE
chr1	16889563	C	A	0.00037	NBPF1	-	FALSE
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr4	39552175	T	C	0.00010	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr10	1086810	T	A	0.00245	IDI2-AS1,IDI1	+,-	FALSE
chr1	54691906	C	G	0.00465	SSBP3	-	FALSE
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	144917841	T	C	4.47769E-05	NBPF20,PDE4DIP	+,-	FALSE
chr3	197682723	T	A	0.00686	IQCG	-	FALSE
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	1650797	A	G	3.70820E-05	CDK11B,CDK11A	-	FALSE
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	109475543	A	G	0.00325	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	111489903	A	C	0.00666	LRIF1	-	FALSE
chr17	31258352	G	A	0.00417	TMEM98	+	FALSE
chr2	173461888	A	G	0.00110	PDK1	+	TRUE	AluJr	SINE,Alu
chr6	42856019	A	G	0.00184	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	201489569	G	A	0.00145	RPS10P7	+	FALSE
chr13	107196415	C	T	0.00285	ARGLU1	-	FALSE	(TTG)n	SINE,Alu
chr2	85837797	T	C	0.00097	USP39,C2orf68	+,-	FALSE	AluSx	SINE,Alu
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr1	120612154	C	G	0.00803	NOTCH2	-	FALSE
chr1	6283348	T	C	0.00082	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	19542239	T	C	0.00032	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	15115284	G	A	0.00305	RBSN	-	FALSE
chr1	15909850	C	G	0.00660	AGMAT	-	FALSE
chr1	145281633	C	A	0.00022	NBPF20,NOTCH2NL	+	FALSE
chr1	66100980	A	T	0.00033	LEPR	+	FALSE
chr1	93828011	G	T	0.00464	DR1	+	FALSE
chr1	24746451	A	G	0.00683	NIPAL3	+	TRUE	AluSc	SINE,Alu
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr1	62516683	G	C	0.00966	PATJ	+	FALSE
chr1	36068281	T	C	0.00331	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	53359745	A	G	0.00129	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	72405098	C	A	0.00646	EXOC6B	-	FALSE
chr1	35648714	A	T	0.00841	SFPQ	-	FALSE
chr19	57816261	A	G	0.00156		.	FALSE	AluY	SINE,Alu
chr6	153292179	T	C	0.00755	FBXO5	-	FALSE
chr1	145694181	A	G	0.00052	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	32373837	G	T	0.00068	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	146629399	G	T	0.00611	PRKAB2	-	FALSE
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr2	206986949	T	C	0.00693		.	FALSE	AluJr	SINE,Alu
chr1	10520154	T	C	0.00018		.	FALSE	AluSx	SINE,Alu
chr12	98942621	A	G	4.05531E-12	TMPO	+	TRUE	AluSc	SINE,Alu
chr16	90037828	G	A	0.00029	CENPBD1	-	FALSE	Tigger12	SINE,Alu
chr1	201299882	T	G	0.00145	PKP1	+	FALSE
chr9	140286415	T	C	0.00254	EXD3	-	FALSE	AluSg	SINE,Alu
chr3	169490779	G	A	0.00147		.	FALSE
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr1	161930908	G	A	0.00664	ATF6	+	FALSE
chr1	168213597	A	G	0.00481		.	FALSE	AluSx1	SINE,Alu
chr16	56510329	T	G	0.00247	OGFOD1	+	FALSE
chr10	5499824	A	G	0.00070	NET1	+	FALSE
chr1	65147002	C	T	6.62669E-07	CACHD1	+	FALSE
chr9	85861582	T	A	0.00604	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr2	175711942	C	T	8.43847E-05	CHN1	-	FALSE
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr1	16574382	A	C	0.00704	FBXO42	-	FALSE
chr1	144868170	C	T	0.00415	NBPF20,PDE4DIP	+,-	FALSE
chr1	212114663	G	A	0.00858	INTS7	-	FALSE
chr19	58420152	C	A	0.00322	ZNF417	-	FALSE
chr9	137534059	C	A	0.00626	COL5A1	+	FALSE
chr2	102508658	T	A	0.00275	MAP4K4	+	FALSE
chr6	31379931	G	A	0.00093		.	FALSE
chr1	1593750	A	G	0.00191	CDK11B,SLC35E2B	-	FALSE
chr19	3467756	C	T	0.00485	NFIC	+	FALSE	(TA)n	SINE,Alu
chr6	26095454	A	G	0.00284	HFE	+	TRUE	AluY	SINE,Alu
chr1	214527252	G	A	0.00830	PTPN14	-	FALSE	MADE2	SINE,Alu
chr1	100676277	A	G	0.00135	DBT	-	FALSE
chr1	46075777	A	G	0.00268	NASP	+	TRUE	AluSx4	SINE,Alu
chr16	10623576	T	C	0.00013	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	53288897	A	G	0.00439	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	220323448	C	T	0.00986	RAB3GAP2	-	FALSE
chr5	132028864	G	A	0.00593	KIF3A	-	FALSE
chr1	19542458	T	C	0.00988	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr6	134492482	A	C	0.00108	SGK1	-	FALSE
chr1	35648842	G	A	0.00015	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr3	38566722	T	C	0.00426	EXOG	+	FALSE	MIRb	SINE,Alu
chr1	193058937	C	T	0.00195	TROVE2	+	FALSE	AluSc	SINE,Alu
chr1	200589813	C	A	1.20032E-05	KIF14	-	FALSE
chr3	57612973	T	C	0.00135	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr1	3545191	C	T	5.51731E-05	TPRG1L	+	FALSE
chr12	80168993	G	T	0.00513	PPP1R12A	-	FALSE
chr1	38423205	A	G	0.00923	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	24862649	A	G	0.00074	RCAN3	+	FALSE
chr1	179042719	A	G	2.68049E-06	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	120695202	C	A	0.00033		.	FALSE
chr1	212277584	G	C	0.00997	DTL	+	FALSE
chr4	17802824	T	C	0.00594	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	229762054	T	A	0.00084	URB2	+	FALSE
chr1	245017462	G	A	0.00255	HNRNPU,SNORA100	-	FALSE
chr7	56131098	T	A	0.00950	CCT6A	+	FALSE	L1M5	SINE,Alu
chr4	7060935	G	C	0.00543	GRPEL1	-	FALSE	Tigger4a	SINE,Alu
chr1	89522646	G	C	0.00027	GBP1	-	FALSE
chr2	191184475	A	G	0.00895	HIBCH	-	FALSE
chr1	36068231	T	C	0.00022	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	19586519	A	G	0.00239	MRTO4	+	TRUE	AluSz	SINE,Alu
chr3	53259329	G	C	0.00036	TKT	-	FALSE
chr5	122165512	C	A	0.00276	SNX2	+	FALSE
chr1	6704652	C	T	1.57063E-06	DNAJC11	-	FALSE
chr4	113108680	A	G	0.00109	C4orf32	+	FALSE
chr1	53289892	A	G	0.00505	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr21	44331206	A	G	0.00167		.	FALSE	AluSz	SINE,Alu
chr7	27237453	C	T	0.00421	HOXA13	-	FALSE
chr2	206983138	T	C	0.00669		.	FALSE	AluJb	SINE,Alu
chr1	28825418	A	G	0.00525	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr8	94744813	C	T	5.22032E-05	RBM12B	-	FALSE
chr1	24301900	G	A	2.65815E-05		.	FALSE
chr2	178482698	A	G	0.00408	TTC30A	-	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr5	176863519	G	C	0.00567	GRK6	+	FALSE
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr17	73886219	T	C	8.52474E-05	TRIM65	-	TRUE	FRAM	SINE,Alu
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr2	128620373	C	T	0.00553	AMMECR1L	-	FALSE
chr1	94343023	A	G	0.00363	DNTTIP2	-	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	109780743	C	A	0.00643	SARS	+	FALSE
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr1	114519351	T	G	0.00773	HIPK1	+	FALSE
chr12	33021934	A	G	0.00035	PKP2	-	FALSE
chr1	116947396	A	G	0.00226	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr1	36770602	T	G	0.00441	THRAP3	+	FALSE	(T)n	SINE,Alu
chr6	150046603	T	C	0.00730	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr1	54692358	G	A	0.00195	SSBP3	-	FALSE
chr1	37949224	C	T	7.78396E-10	ZC3H12A	+	FALSE
chr1	19542305	T	C	0.00085	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	320211	A	G	6.69717E-05		.	FALSE	AluJo	SINE,Alu
chr1	160966434	T	C	4.88498E-15	F11R	-	TRUE	AluSg	SINE,Alu
chr12	124069108	G	A	0.00635	TMED2	+	FALSE	(GCG)n	SINE,Alu
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr1	6683582	C	A	0.00152	PHF13	+	FALSE
chr9	115446668	T	C	1.81109E-05	INIP	-	TRUE	AluJr	SINE,Alu
chr1	28662053	G	A	0.00158	MED18	+	FALSE	AluSq2	SINE,Alu
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	29519712	T	C	0.00017	MECR	-	TRUE	AluJb	SINE,Alu
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr1	11721616	G	A	0.00243	FBXO44	+	FALSE
chr1	1419678	A	G	0.00558	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr1	145285310	C	A	5.09397E-05	NBPF20,NOTCH2NL	+	FALSE
chr2	74690039	G	A	0.00412	MOGS	-	FALSE
chr1	142804438	G	T	0.00618		.	FALSE
chr5	139931631	G	C	0.00138	SRA1	-	FALSE
chr1	163116048	G	T	3.38683E-05	RGS5	-	FALSE
chr3	40578935	A	G	0.00063	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	9328213	A	G	5.00055E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	16891365	G	A	1.42078E-05	NBPF1	-	FALSE
chr1	197475873	G	A	0.00844	DENND1B	-	FALSE
chr1	145329095	C	G	0.00261	NBPF20,NBPF10	+	FALSE
chr1	138266	C	T	0.00802	LOC729737	-	FALSE
chr17	28575454	A	C	0.00470	BLMH	-	FALSE
chr1	16944809	G	C	9.47535E-05	CROCCP2	-	FALSE
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr2	242512138	A	G	9.62871E-05	BOK	+	FALSE
chr5	112312528	T	C	0.00827	DCP2	+	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	33149486	A	G	0.00528	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	49745425	A	G	0.00489	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr1	16269737	C	T	0.00816	ZBTB17	-	FALSE
chr1	231377081	C	T	0.00895	GNPAT	+	FALSE
chr2	131129926	G	T	0.00034	PTPN18	+	FALSE
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr7	44841238	T	A	0.00108	PPIA	+	FALSE
chr17	29578724	C	T	0.00514	NF1	+	FALSE
chr1	90049040	A	G	0.00190	LRRC8B	+	FALSE
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr3	37031951	G	A	0.00914	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	6633042	C	T	0.00377	NSUN2	-	FALSE
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr1	3806074	G	A	0.00354	C1orf174	-	FALSE	AluSp	SINE,Alu
chr1	33148706	A	G	0.00087	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	25570563	A	T	0.00276	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	16889138	T	C	0.00356	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	76229120	T	C	0.00309	ACADM	+	FALSE
chr1	120455441	A	G	0.00872	NOTCH2	-	FALSE
chr1	11782935	A	G	0.00067		.	FALSE	AluSx	SINE,Alu
chr1	99164434	G	A	0.00911	SNX7	+	FALSE
chr1	36773405	T	G	0.00546	SH3D21	+	FALSE
chr1	100548868	T	C	8.06321E-05	MFSD14A	+	FALSE
chr7	44841239	T	A	0.00199	PPIA	+	FALSE
chr7	5107572	A	C	0.00563	RBAK-RBAKDN,RBAK	+	FALSE	L1ME3A	SINE,Alu
chr1	114940211	G	T	0.00925	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	132481526	C	A	0.00040	C2orf27A	+	FALSE
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr2	240954005	C	A	0.00021	NDUFA10	-	FALSE
chr7	197428	G	A	3.11254E-09	FAM20C	+	FALSE
chr5	140564263	C	T	0.00475	PCDHB16	+	FALSE
chr2	37329352	T	C	0.00403		.	FALSE	AluJr4	SINE,Alu
chr17	65334758	T	C	1.31160E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr6	42849746	A	G	0.00042	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	45975286	A	G	0.00200	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	19665310	C	T	0.00618	CAPZB	-	FALSE	(TTTCT)n	SINE,Alu
chr1	225707044	C	T	1.61826E-07	ENAH	-	FALSE
chr1	152186699	T	A	0.00891	HRNR	-	FALSE
chr1	44818529	T	C	0.00310	ERI3	-	FALSE
chr1	180013235	T	G	0.00319	CEP350	+	FALSE
chr6	44222158	T	A	0.00856	SLC35B2	-	FALSE
chr3	14986104	T	C	0.00307	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr2	44115183	T	A	0.00914	LRPPRC	-	FALSE
chr2	32235359	A	C	0.00664	MEMO1	-	FALSE
chr1	19934679	G	A	0.00354	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	107773064	T	C	0.00421	CD47	-	TRUE	FLAM_A	SINE,Alu

RBP	ILF2
Knock-Method	shRNA
RBP Family	DZF
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR366FFV
Platform	HiSeq
Pubmed ID	32252787

ILF2 - Target Gene Network