Dataset Overview
RBP
DNAJC21
Knock-Method
shRNA
RBP Family
zf-C2H2_jaz
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR385KOY
Platform
HiSeq
Pubmed ID
32252787
DNAJC21 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of DNAJC21
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
15.89
8.95
-0.59846
0.00018
0.00075
AADAC
0.57
1.42
1.16090
0.00045
0.00166
AADAT
4.81
3.76
-0.36374
0.02458
0.05282
AAED1
6.5
5.3
-0.25440
0.04393
0.08609
AAK1
2.42
3.27
0.51206
0.00044
0.00162
AAR2
19.98
14.56
-0.41796
8.52249E-06
4.80755E-05
AARS
64.38
67.54
0.20400
0.03621
0.07315
AATF
16.24
18.81
0.21212
0.02829
0.05952
AATK
1.82
2.04
0.39047
0.03654
0.07370
ABAT
21.04
27.59
0.39209
4.05398E-06
2.45614E-05
Showing 1 to 10 of 6,957 entries
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Function Analysis of Target Genes of DNAJC21
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
A1CF
52623792_52623840_52619601_52619745_52645340_52645435
0.00413
0.105
DataSet_01_360
View details
ABI1
27044583_27044670_27040526_27040712_27047990_27048167
0.00000
-0.357
DataSet_01_360
View details
ABLIM1
116213137_116213242_116211382_116211430_116225456_116225586
0.00891
0.024
DataSet_01_360
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ACADM
76194085_76194173_76190451_76190502_76198328_76198426
0.00492
0.059
DataSet_01_360
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ACADM
76194073_76194173_76190464_76190502_76198328_76198426
0.00612
0.103
DataSet_01_360
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ACSL3
223765391_223765498_223725651_223725976_223773450_223773754
0.00751
-0.063
DataSet_01_360
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ACSL4
108934231_108934360_108926364_108926601_108939372_108939425
0.00458
0.046
DataSet_01_360
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ADD1
2928365_2928402_2927740_2927839_2929897_2931054
0.00465
0.058
DataSet_01_360
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ADD1
2928368_2928402_2927740_2927839_2929897_2931789
0.00913
0.06
DataSet_01_360
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AFMID
76202026_76202131_76187050_76187141_76202991_76203782
0.00015
0.077
DataSet_01_360
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Showing 1 to 10 of 309 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
A2M
9251202_9251352_9252061_9252119_9248134_9248296
0.00000
-0.227
DataSet_01_360
View details
ABCC1
16103632_16103758_16110352_16110478_16101672_16101849
0.00296
0.247
DataSet_01_360
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ABI1
27044583_27044670_27047990_27048164_27040526_27040712
0.00000
0.268
DataSet_01_360
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ABI1
27044583_27044670_27047990_27048167_27040526_27040712
0.00000
0.209
DataSet_01_360
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ABLIM1
116207638_116207779_116211382_116211430_116205070_116205162
0.00475
-0.151
DataSet_01_360
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ACTN4
39200896_39200982_39201915_39202001_39200034_39200116
0.00654
-0.041
DataSet_01_360
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ADH4
100060211_100060299_100062691_100062833_100057616_100057848
0.00695
-0.118
DataSet_01_360
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AGAP1
236839408_236839567_236877105_236877267_236817381_236817550
0.00042
0.198
DataSet_01_360
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AHSG
186336079_186336280_186336358_186336426_186335088_186335139
0.00121
-0.006
DataSet_01_360
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AHSG
186336079_186336284_186336300_186336426_186335088_186335139
0.00844
-0.007
DataSet_01_360
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Showing 1 to 10 of 136 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AL136419.6
24682614_24683357_24683199_24683357_24680885_24681035
0.00020
0.069
DataSet_01_360
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ALCAM
105268970_105269201_105268970_105269103_105270987_105271026
0.00489
0.08
DataSet_01_360
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ATG16L1
234181611_234182423_234181611_234181698_234183321_234183424
0.00215
0.366
DataSet_01_360
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ATXN2L
28847253_28847806_28847253_28847443_28848048_28848558
0.00675
0.133
DataSet_01_360
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BPTF
65941524_65942441_65941524_65942012_65943841_65943924
0.00093
-0.164
DataSet_01_360
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BTAF1
93718821_93719039_93718821_93718911_93719541_93719637
0.00710
0.118
DataSet_01_360
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C17orf76-AS1
16342640_16343017_16342640_16342728_16343498_16343567
0.00740
0.051
DataSet_01_360
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CANX
179125906_179126103_179125906_179126050_179132679_179132853
0.00432
-0.078
DataSet_01_360
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CCDC66
56600621_56600787_56600621_56600768_56600977_56601081
0.00914
-0.329
DataSet_01_360
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COL27A1
117014832_117014933_117014832_117014926_117015158_117015212
0.00279
0.071
DataSet_01_360
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Showing 1 to 10 of 41 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCC1
16110352_16110478_16110418_16110478_16108347_16108485
0.00001
-0.884
DataSet_01_360
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ACIN1
23533313_23533466_23533313_23533430_23533563_23533694
0.00120
-0.096
DataSet_01_360
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ACSL4
108926364_108926895_108926364_108926781_108939372_108939425
0.00606
0.217
DataSet_01_360
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AHSG
186338374_186339089_186338883_186339089_186336358_186336426
0.00720
0.027
DataSet_01_360
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ANKRD13D
67058062_67058992_67058946_67058992_67057763_67057917
0.00094
-0.235
DataSet_01_360
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APOB
21265232_21265410_21265232_21265348_21266384_21266423
0.00389
-0.009
DataSet_01_360
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ARHGEF40
21556114_21556257_21556126_21556257_21555478_21555622
0.00431
-0.036
DataSet_01_360
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ATP6V1G2-DDX39B
31508258_31508354_31508258_31508311_31509726_31509925
0.00079
0.436
DataSet_01_360
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ATXN7L3
42273401_42273468_42273401_42273447_42273763_42273786
0.00046
-0.092
DataSet_01_360
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AUP1
74754067_74754279_74754067_74754186_74754374_74754490
0.00146
0.04
DataSet_01_360
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACADVL
7124084_7124377_7124084_7124149_7124242_7124377
0.00171
-0.035
DataSet_01_360
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AKR1B1
134132049_134132813_134132049_134132133_134132731_134132813
0.00030
0.143
DataSet_01_360
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AUP1
74755379_74755616_74755379_74755448_74755543_74755616
0.00042
0.03
DataSet_01_360
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BAP1
52436794_52437314_52436794_52436887_52437153_52437314
0.00025
0.088
DataSet_01_360
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BRAT1
2577514_2578985_2577514_2578398_2578812_2578985
0.00978
-0.168
DataSet_01_360
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C17orf76-AS1
16342350_16342728_16342350_16342374_16342640_16342728
0.00028
-0.016
DataSet_01_360
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CAD
27456179_27456676_27456179_27456404_27456493_27456676
0.00315
-0.093
DataSet_01_360
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CC2D1B
52823452_52824133_52823452_52823570_52824002_52824133
0.00981
-0.176
DataSet_01_360
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CD55
207510037_207510754_207510037_207510163_207510673_207510754
0.00833
-0.022
DataSet_01_360
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CERS2
150939231_150939678_150939231_150939338_150939549_150939678
0.00101
0.041
DataSet_01_360
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
27733305
A
C
0.00374
WASF2
-
FALSE
chr1
93826775
T
C
0.00172
DR1
+
FALSE
chr1
36067821
T
C
1.12344E-05
PSMB2
-
TRUE
AluSz
SINE,Alu
chr1
160231910
A
T
0.00051
DCAF8
-
FALSE
chr1
10520202
T
C
0.00529
.
FALSE
AluSx
SINE,Alu
chr1
1656557
T
C
0.00061
SLC35E2
-
TRUE
AluSz
SINE,Alu
chr1
222907790
C
T
0.00253
BROX
+
FALSE
chr1
144821888
C
G
0.00093
NBPF20,NBPF9
+
FALSE
chr1
155851620
A
G
0.00066
SYT11
+
TRUE
AluSq2
SINE,Alu
chr1
204524866
A
G
0.00369
MDM4
+
TRUE
AluSx
SINE,Alu
Showing 1 to 10 of 220 entries
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression