RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	10520767	T	C	5.51501E-05	DFFA	-	TRUE	AluSc8	SINE,Alu
chr17	56049829	T	C	5.66836E-08	VEZF1	-	TRUE
chr1	28826085	A	G	0.00153	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr16	81064543	A	G	0.00066	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	217366196	T	A	0.00207		.	FALSE
chr10	17275583	T	C	0.00374	VIM	+	FALSE
chr7	55433880	G	C	0.00778	LANCL2	+	FALSE
chr1	184762676	T	C	0.00548	FAM129A	-	TRUE	AluSz	SINE,Alu
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr1	179042512	A	G	4.06106E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	206983797	T	C	0.00145		.	FALSE	AluSx	SINE,Alu
chr1	10042988	A	G	0.00359	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	3193040	G	A	0.00650	TSSC1	-	FALSE
chr2	75118737	C	T	0.00154	HK2	+	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr1	160231113	C	T	0.00204	DCAF8	-	FALSE
chr2	128950548	A	G	0.00589	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	144931101	G	A	0.00012	NBPF20,PDE4DIP	+,-	FALSE
chr1	144873887	C	T	0.00088	NBPF20,PDE4DIP	+,-	FALSE
chr17	41133089	C	T	0.00179	RUNDC1	+	FALSE
chr1	16892256	T	C	0.00370	NBPF1	-	FALSE
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr3	44791569	T	C	0.00685	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	100388748	T	C	0.00445	AGL	+	FALSE
chr12	133298417	A	G	0.00084	PGAM5	+	TRUE	AluSp	SINE,Alu
chr15	63111739	T	C	0.00914	TLN2	+	FALSE
chr2	75888160	A	C	0.00188	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	15989141	C	G	0.00364		.	FALSE
chr3	183861243	A	G	0.00049	EIF2B5	+	FALSE
chr1	6283306	T	C	0.00609	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	121133733	G	A	0.00467	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	93826775	T	C	0.00172	DR1	+	FALSE
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr1	46075783	A	G	0.00755	NASP	+	TRUE	AluSx4	SINE,Alu
chr14	77787088	C	T	0.00076	POMT2	-	FALSE
chr2	112252628	G	T	7.26456E-05	MIR4435-2HG	-	FALSE
chr2	128620438	C	A	0.00230	AMMECR1L	-	FALSE
chr1	40435513	C	A	0.00656	MFSD2A	+	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr15	42861705	A	G	0.00518	HAUS2	+	TRUE	AluJb	SINE,Alu
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chr1	10042955	A	G	0.00430	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	10520487	T	C	0.00559		.	FALSE	AluSx1	SINE,Alu
chr3	156259229	T	C	1.62025E-06	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	23833608	G	A	0.00890	E2F2	-	FALSE
chr2	88895123	T	C	0.00706	EIF2AK3	-	FALSE
chr4	101946459	C	T	0.00245	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	22929376	A	G	0.00378	EPHA8	+	FALSE
chrX	9686187	T	C	0.00420	TBL1X	+	FALSE
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr12	52710715	G	A	0.00729	KRT83	-	FALSE
chr1	10518037	T	C	0.00285		.	FALSE	AluJr	SINE,Alu
chr1	87379493	G	A	0.00353	SEP15	-	FALSE
chr1	16889423	G	C	6.92544E-07	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	19578576	G	A	0.00347	MRTO4	+	FALSE
chr20	18469054	T	C	0.00522	RBBP9	-	TRUE	AluJr	SINE,Alu
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr1	179326588	A	G	0.00563	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	11782984	A	G	0.00542		.	FALSE	AluSx	SINE,Alu
chr12	98942679	A	G	2.08991E-07	TMPO	+	FALSE	AluSc	SINE,Alu
chr19	46053667	A	G	0.00995	OPA3	-	FALSE
chr1	10519888	T	C	0.00666		.	FALSE	AluJr	SINE,Alu
chr5	130494984	A	T	0.00018	HINT1	-	FALSE
chr8	48889823	C	A	0.00770	MCM4	+	FALSE	AluSx3	SINE,Alu
chr1	153617973	A	G	4.00129E-07	CHTOP	+	FALSE
chr1	67874689	T	C	0.00053	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr6	31324202	T	A	0.00300		.	FALSE
chr1	46829013	A	G	0.00360	NSUN4	+	FALSE
chr3	14986111	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	41281413	T	A	0.00047	CTNNB1	+	FALSE	(T)n	SINE,Alu
chr1	120163831	A	G	0.00706	ZNF697	-	FALSE
chr4	89181451	T	C	8.32748E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr3	4403394	A	G	0.00388	SUMF1	-	FALSE
chr5	177576458	A	T	0.00427		.	FALSE
chr1	40537937	A	C	0.00091	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr1	32372358	C	T	0.00303	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr1	145500918	T	C	0.00127	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr1	149581866	C	G	0.00774	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr1	46093409	A	C	0.00383	GPBP1L1	-	FALSE	A-rich	SINE,Alu
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	38522138	G	T	0.00769	ATL2	-	FALSE
chr3	156258255	T	C	0.00059	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	77759578	A	G	0.00955	AK5	+	FALSE
chr1	28836872	A	G	0.00019	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr12	88454641	A	T	0.00753	CEP290	-	FALSE
chr7	138730361	T	C	0.00316	ZC3HAV1	-	FALSE	L2-1_AMi	SINE,Alu
chr1	245008386	G	C	0.00041		.	FALSE	MER2	SINE,Alu
chr2	37330476	T	C	0.00269		.	FALSE	AluSq2	SINE,Alu
chr11	67782827	G	A	0.00163	ALDH3B1	+	FALSE
chr2	128644574	A	G	0.00163		.	FALSE
chr5	79923424	T	C	0.00054	DHFR	-	TRUE	AluJr	SINE,Alu
chr3	183901281	G	A	4.84515E-09	AP2M1	+	FALSE
chr1	9161199	T	C	0.00468		.	FALSE	AluSx	SINE,Alu
chr17	31258352	G	A	0.00417	TMEM98	+	FALSE
chr7	2767939	T	C	0.00028	AMZ1,GNA12	+,-	FALSE
chr2	70452146	T	G	0.00192	TIA1	-	FALSE
chr5	65453894	T	A	0.00211	SREK1	+	FALSE
chr2	86249930	T	C	6.06022E-05	LOC90784	-	TRUE	AluJr	SINE,Alu
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr1	45975574	A	G	0.00890	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr6	42045545	A	G	0.00440	TAF8	+	TRUE	AluSz	SINE,Alu
chr1	22109370	G	A	0.00371	USP48	-	FALSE
chr1	145512024	A	G	0.00392	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	55207985	G	A	0.00156	MROH7-TTC4,TTC4	+	FALSE
chr19	51305797	T	C	0.00397	C19orf48	-	TRUE	AluSg	SINE,Alu
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr1	19684006	G	C	0.00396	CAPZB	-	FALSE
chr1	138156	G	T	0.00048	LOC729737	-	FALSE
chr2	206981856	T	C	0.00174		.	FALSE	AluJb	SINE,Alu
chr15	90820171	A	G	0.00185		.	FALSE
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr18	29410068	C	T	0.00807	TRAPPC8	-	FALSE
chr1	93299394	A	G	0.00655	FAM69A,RPL5	+,-	FALSE
chr1	161753841	G	A	0.00039	ATF6	+	FALSE
chr1	46828700	A	G	0.00095	NSUN4	+	FALSE
chr2	152314385	G	A	0.00040	RIF1	+	FALSE
chr1	148561089	T	C	0.00975	NBPF15	+	FALSE
chr1	3703611	A	C	0.00208	LRRC47	-	FALSE
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr3	56703746	A	C	0.00027	FAM208A	-	FALSE
chr2	188385337	C	T	0.00210	TFPI	-	FALSE	L1MC3	SINE,Alu
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr3	195435168	T	G	0.00111	LINC00969	+	FALSE
chr3	48787051	T	C	0.00105	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr18	212601	C	A	0.00189	USP14	+	FALSE	AluSz	SINE,Alu
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr1	77166017	G	A	0.00627		.	FALSE
chr12	106460001	G	A	2.23324E-05	NUAK1	-	FALSE
chr2	118854088	C	T	0.00543	INSIG2	+	FALSE
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr16	74734743	G	C	0.00436	MLKL	-	FALSE
chr1	6585331	T	C	0.00094	NOL9	-	TRUE	FAM	SINE,Alu
chr1	6583383	T	C	0.00305	NOL9	-	TRUE	AluSq	SINE,Alu
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr1	25717365	C	G	0.00229	RHCE	-	FALSE
chr1	179325847	A	G	7.26692E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr3	149686507	T	C	0.00193	PFN2	-	FALSE
chr1	54635874	T	C	0.00334		.	FALSE	AluSx	SINE,Alu
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr1	25570561	T	A	0.00425	RSRP1	-	FALSE	Alu	SINE,Alu
chr19	39220786	C	A	0.00303	ACTN4	+	FALSE	A-rich	SINE,Alu
chr1	144930596	C	A	0.00578	NBPF20,PDE4DIP	+,-	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr1	21810693	A	G	0.00370	NBPF3	+	FALSE	L1MC4	SINE,Alu
chrX	77083007	T	C	0.00371	MAGT1	-	TRUE	AluSg	SINE,Alu
chr1	145209366	A	G	0.00019	NBPF20,NOTCH2NL	+	FALSE
chr8	144940368	C	T	0.00020	EPPK1	-	FALSE
chr15	60678712	G	A	0.00801	ANXA2	-	FALSE
chr3	40503557	T	C	0.00487	RPL14	+	FALSE
chr2	170607000	T	A	0.00590	PHOSPHO2-KLHL23,KLHL23	+	FALSE
chr22	36677546	T	G	0.00197	MYH9	-	FALSE
chr6	37142192	C	T	0.00850	PIM1	+	FALSE
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr4	2070260	G	A	0.00724	NAT8L	+	FALSE	(TG)n	SINE,Alu
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr3	88191439	A	C	0.00657	CGGBP1,ZNF654	+,-	FALSE
chr1	143135063	C	A	0.00397	LOC102723769	-	FALSE
chr1	17345245	C	T	0.00812	SDHB	-	FALSE
chr2	24227357	A	G	0.00295		.	FALSE	AluSc	SINE,Alu
chr6	24720271	T	G	0.00839		.	FALSE
chr14	74526154	T	C	0.00030	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr1	10520532	T	C	0.00142		.	FALSE	AluSx1	SINE,Alu
chr2	29135468	C	G	0.00262	WDR43	+	FALSE
chr1	40537944	C	A	0.00076	CAP1	+	FALSE
chr1	182353198	A	T	0.00985	GLUL	-	FALSE
chr16	11931210	G	T	0.00292	RSL1D1	-	FALSE
chr5	130538043	A	G	0.00713	LYRM7	+	TRUE	AluSp	SINE,Alu
chr2	178406762	G	T	0.00708	AGPS	+	FALSE
chr1	217804325	G	A	0.00229	GPATCH2	-	FALSE
chr3	10255002	C	G	0.00043	IRAK2	+	FALSE
chr3	44791062	T	C	0.00124	KIAA1143	-	FALSE
chr2	135208352	T	G	0.00259	MGAT5	+	FALSE
chr4	152025795	T	A	0.00516	RPS3A	+	FALSE
chr1	1647893	C	T	0.00509	CDK11B,CDK11A	-	FALSE
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	26755175	G	C	0.00211	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr3	48787684	T	C	0.00494	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	65898873	G	C	0.00530	LEPR,LEPROT	+	FALSE
chr1	45976261	T	A	0.00018	MMACHC	+	FALSE
chr1	1245100	C	T	0.00656	PUSL1	+	FALSE
chr1	24746451	A	G	0.00683	NIPAL3	+	TRUE	AluSc	SINE,Alu
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	146643580	G	A	0.00113	PRKAB2	-	FALSE
chr2	217366919	A	G	0.00709		.	FALSE	AluSz6	SINE,Alu
chr10	126677250	G	T	0.00762	CTBP2	-	FALSE
chr2	61277775	A	G	0.00640	PEX13	+	TRUE	AluY	SINE,Alu
chr2	202901910	G	A	0.00963	FZD7	+	FALSE
chr10	61548856	T	C	0.00067	CCDC6	-	FALSE
chr2	74375276	A	C	0.00328	BOLA3-AS1	+	FALSE
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr14	50792837	A	G	0.00550	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	33148367	C	G	0.00020	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	3548832	G	C	0.00051	WRAP73	-	FALSE
chr1	6583592	T	C	0.00939	NOL9	-	TRUE	AluSq	SINE,Alu
chr7	6501833	A	T	0.00937	KDELR2	-	FALSE
chr4	103718454	T	A	0.00446	LOC102723704,UBE2D3	+,-	FALSE
chr1	28906337	A	G	0.00810	SNHG12,SNORA61	-	FALSE
chr2	74442407	A	G	0.00384	MTHFD2	+	FALSE
chr1	148003730	T	C	0.00415	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	214529740	T	C	0.00375	PTPN14	-	TRUE
chr1	118408218	C	A	0.00857	GDAP2	-	FALSE
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	35649803	A	C	0.00659	SFPQ	-	FALSE
chr1	225974645	A	G	0.00984	SRP9	+	TRUE	AluJr	SINE,Alu
chr3	10192720	A	G	0.00110	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	94352553	C	T	0.00136	GCLM	-	FALSE	AluSx1	SINE,Alu
chr1	7737792	C	G	8.96820E-06	CAMTA1	+	FALSE
chr3	179117164	T	C	0.00234	GNB4	-	FALSE	AluSz	SINE,Alu
chr1	200375005	A	T	0.00202	ZNF281	-	FALSE
chr4	843695	A	G	0.00602	GAK	-	FALSE
chr1	35320644	A	T	0.00627	SMIM12	-	FALSE
chr15	41593268	A	G	0.00084		.	FALSE	AluSz6	SINE,Alu
chr10	99504630	G	T	0.00544	ZFYVE27	+	FALSE
chr15	49454018	C	T	0.00053	GALK2	+	FALSE	AluSx1	SINE,Alu
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr1	27481039	A	G	0.00021	SLC9A1	-	FALSE
chr3	112299732	A	G	0.00189	SLC35A5	+	FALSE
chr1	150281017	A	G	0.00057	MRPS21	+	TRUE	AluSz	SINE,Alu
chr14	31916792	C	T	3.89824E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	120539687	T	C	0.00179	NOTCH2	-	FALSE
chr3	119212015	G	A	0.00024	POGLUT1	+	FALSE
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr12	133635613	T	C	0.00805		.	FALSE
chr16	74655596	T	G	0.00028	RFWD3	-	FALSE	AluSx	SINE,Alu
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr17	57279281	A	G	0.00055	PRR11	+	TRUE	AluSq2	SINE,Alu
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr1	155161704	G	C	0.00034	MUC1	-	FALSE
chr1	36067677	T	C	0.00655	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	201845881	A	C	0.00032	IPO9	+	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr1	10517527	T	C	0.00304		.	FALSE	AluSx1	SINE,Alu
chr10	8116464	G	A	0.00695	GATA3	+	FALSE	A-rich	SINE,Alu
chr1	52375424	T	C	0.00109	RAB3B	-	FALSE
chr1	53289892	A	G	0.00070	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr5	151041884	T	A	0.00101	SPARC	-	FALSE
chr1	201846630	C	A	0.00041	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	28836973	A	G	0.00017	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr4	165998152	T	C	0.00288	TMEM192	-	TRUE	AluSx	SINE,Alu
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr3	179042910	A	G	0.00061	ZNF639	+	TRUE	AluSp	SINE,Alu
chr1	78414285	T	A	0.00179	FUBP1	-	FALSE
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr2	223765491	C	T	0.00689	ACSL3	+	FALSE
chr2	99812289	A	G	0.00282	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	1252510	T	C	1.62601E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	120612163	C	A	0.00812	NOTCH2	-	FALSE
chr2	106510201	C	A	0.00638	NCK2	+	FALSE
chr1	44171143	C	A	0.00118	KDM4A-AS1,KDM4A	+,-	FALSE
chr1	115592820	T	C	0.00107	TSPAN2	-	FALSE
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr6	44222156	A	T	0.00856	SLC35B2	-	FALSE
chr1	109465170	T	C	0.00565	GPSM2	+	FALSE
chr1	26449341	A	G	0.00622	PDIK1L	+	FALSE
chr1	46827769	C	T	0.00103	NSUN4	+	FALSE
chr1	28865502	G	A	0.00073	RCC1	+	FALSE
chr3	178978648	G	A	0.00479	KCNMB3	-	FALSE
chr3	50150389	A	G	0.00046	RBM5	+	TRUE	AluSx	SINE,Alu
chr19	11256697	T	C	0.00039	SPC24	-	TRUE	AluJr4	SINE,Alu
chr2	143638994	G	A	0.00075	KYNU	+	FALSE
chr1	148003749	T	C	0.00517	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	10521130	T	C	0.00807	DFFA	-	TRUE	AluY	SINE,Alu
chr1	161088583	T	G	0.00822	NIT1	+	FALSE
chr1	894378	T	A	0.00068	NOC2L	-	FALSE
chr1	28836975	A	G	0.00023	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr2	36777209	T	C	0.00299	CRIM1	+	FALSE	(TG)n	SINE,Alu
chr5	76372541	G	C	0.00498	ZBED3	-	FALSE
chr1	40975260	G	C	0.00902	EXO5	+	FALSE
chr1	149913727	T	C	0.00721	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr2	37331116	T	C	0.00286		.	FALSE	AluSx1	SINE,Alu
chr1	145273345	T	C	0.00190	NBPF20,NOTCH2NL	+	FALSE
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr5	37290335	T	C	1.49367E-06		.	FALSE	AluSz	SINE,Alu
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr1	16892275	C	T	0.00230	NBPF1	-	FALSE
chr12	56215097	A	T	0.00051	DNAJC14	-	FALSE
chr2	37331560	T	C	6.28398E-05		.	FALSE	AluJb	SINE,Alu
chr1	179042482	A	G	0.00079	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr4	17803681	T	C	3.85233E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr12	125512541	A	G	6.52088E-06		.	FALSE
chr1	10520672	T	C	0.00222	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	44791062	T	C	0.00035	KIAA1143	-	FALSE
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr1	3546132	G	A	0.00113	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr2	37328082	T	C	0.00243		.	FALSE
chr1	110136329	G	T	0.00993	GNAI3	+	FALSE
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr1	35648710	G	C	0.00377	SFPQ	-	FALSE
chr1	36386884	C	T	0.00024	AGO1	+	FALSE
chr2	9629955	G	T	0.00866	ADAM17	-	FALSE
chr1	33086876	T	C	0.00104	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	19586458	A	G	0.00029	MRTO4	+	TRUE	AluSz	SINE,Alu
chr20	25428724	A	G	0.00789	GINS1	+	TRUE	AluJb	SINE,Alu
chr12	98942696	A	G	3.06836E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr8	128944720	G	T	0.00751	PVT1	+	FALSE
chr2	86252222	T	C	0.00468	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr5	114547295	C	A	0.00294	PGGT1B	-	FALSE
chr3	13670508	G	A	0.00017	FBLN2	+	FALSE
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr1	160966434	T	C	0.00175	F11R	-	TRUE	AluSg	SINE,Alu
chr2	174090631	A	C	0.00038	ZAK,MLK7-AS1	+,-	FALSE
chr1	89447720	G	A	0.00497	KYAT3,RBMXL1	-	FALSE
chr6	57034842	T	G	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr1	40722795	G	A	9.35494E-07		.	FALSE	Charlie2a	SINE,Alu
chr1	144931392	G	A	0.00172	NBPF20,PDE4DIP	+,-	FALSE
chr4	25253995	C	T	9.95051E-10	PI4K2B	+	FALSE
chr20	35520223	T	C	0.00111	TLDC2	+	FALSE	AluSx3	SINE,Alu
chr3	194124624	C	T	0.00502	ATP13A3	-	FALSE
chr7	20177664	T	C	0.00089	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr2	176791250	T	C	0.00078	LNPK	-	TRUE	MSTD	SINE,Alu
chr15	86288387	C	T	0.00809	AKAP13	+	FALSE
chr9	132268442	A	G	0.00642	LINC00963	+	TRUE	AluJb	SINE,Alu
chr2	37331736	T	C	0.00165		.	FALSE	AluJb	SINE,Alu
chr1	6165419	C	T	0.00883	CHD5	-	FALSE
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr1	200589540	T	A	0.00151	KIF14	-	FALSE
chr3	49315592	T	C	0.00127	USP4	-	FALSE
chr19	9672981	T	C	0.00041		.	FALSE	AluSx3	SINE,Alu
chr1	31905886	C	A	0.00273	SERINC2	+	FALSE
chr1	11347142	C	G	0.00789	UBIAD1	+	FALSE
chr1	89447854	G	T	0.00310	KYAT3,RBMXL1	-	FALSE
chr1	26774224	A	G	0.00100	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	6683581	A	C	0.00126	PHF13	+	FALSE
chr8	8750467	A	G	0.00131	MFHAS1	-	FALSE
chr1	1668168	G	T	0.00344	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr2	160624383	A	T	0.00018	MARCH7	+	FALSE
chr1	179811936	T	C	0.00229	TOR1AIP2	-	FALSE	AluY	SINE,Alu
chr11	68523567	T	C	0.00079	CPT1A	-	TRUE	AluSq	SINE,Alu
chr3	45267310	C	T	0.00038	TMEM158	-	FALSE
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr1	145313405	C	T	0.00322	NBPF20,NBPF10	+	FALSE
chr1	19543247	T	C	0.00813	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr21	34728099	A	G	1.57787E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr2	37327702	T	C	0.00519		.	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr1	6704652	C	T	1.57063E-06	DNAJC11	-	FALSE
chr2	203742324	T	C	0.00482		.	FALSE	AluJb	SINE,Alu
chr3	10290511	G	T	0.00289	TATDN2	+	FALSE
chr1	20977380	T	C	0.00429	PINK1,PINK1-AS	+,-	FALSE
chr1	33148736	A	G	2.35913E-09	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	16889041	C	T	0.00429	NBPF1	-	FALSE
chr9	80888613	A	G	0.00904		.	FALSE	AluSx	SINE,Alu
chr1	43167907	T	C	0.00072	YBX1	+	FALSE
chr1	3545189	T	G	0.00027	TPRG1L	+	FALSE
chr2	203745105	T	C	0.00644		.	FALSE	AluSx	SINE,Alu
chr1	10517485	T	C	0.00040		.	FALSE	AluSx1	SINE,Alu
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE
chr19	59095126	G	T	0.00303	CENPBD1P1	+	FALSE
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr1	28930023	G	A	0.00037	TAF12	-	FALSE
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr3	124948047	C	G	0.00285	ZNF148	-	FALSE
chr2	113962806	A	G	0.00309		.	FALSE	AluSz	SINE,Alu
chr17	56081432	G	A	4.92367E-05	SRSF1	-	FALSE
chr1	569981	C	A	4.36771E-05		.	FALSE
chr2	55459824	C	T	0.00786	RPS27A	+	FALSE
chr1	110604747	G	A	0.00739	ALX3	-	FALSE
chr1	15989141	C	G	0.00677		.	FALSE
chr1	179832748	G	C	7.50400E-12	TOR1AIP2	-	FALSE	FLAM_C	SINE,Alu
chr19	12740463	A	G	0.00120	ZNF791	+	TRUE	AluYh3a3	SINE,Alu
chr1	161160460	T	A	0.00298	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr10	102315864	T	A	0.00290		.	FALSE
chr2	103332887	T	A	0.00515	MFSD9	-	FALSE	L2d2	SINE,Alu
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	120839681	C	A	0.00077	FAM72B	+	FALSE
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr11	16771525	T	C	0.00014	C11orf58	+	FALSE
chr22	18571457	A	G	0.00493	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	1421531	C	A	0.00409	ATAD3B	+	FALSE
chr1	52817399	T	C	0.00346	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr4	39552022	T	C	0.00015	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	204524357	A	G	0.00568	MDM4	+	TRUE	AluY	SINE,Alu
chr1	19542456	T	C	0.00323	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	161932324	A	G	0.00056	ATF6	+	FALSE
chrX	2824933	T	C	0.00066	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	17928	T	A	0.00956	WASH7P	-	FALSE
chr2	85133793	G	A	0.00577	TMSB10	+	FALSE
chr1	144932197	T	A	0.00430	NBPF20,PDE4DIP	+,-	FALSE
chr4	17802976	T	C	0.00146	DCAF16	-	TRUE	AluSz	SINE,Alu
chr16	10623525	T	C	8.96209E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	195701388	G	A	0.00274	SDHAP1	-	FALSE
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr3	156259317	T	C	0.00189	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr3	12628920	G	C	3.08728E-06	RAF1	-	FALSE
chr2	201774341	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr19	21273765	A	G	0.00253	ZNF714	+	FALSE	AluSc	SINE,Alu
chr5	64964623	T	C	1.14652E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr5	81571877	C	T	0.00250	RPS23	-	FALSE
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr15	72635829	A	C	0.00054	HEXA	-	FALSE
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr1	225974592	T	G	2.09928E-05	SRP9	+	FALSE	AluJr	SINE,Alu
chr2	206480819	C	T	0.00663	PARD3B	+	FALSE
chr2	30480670	G	T	0.00167	LBH	+	FALSE
chr1	118409491	A	T	0.00471	GDAP2	-	FALSE	(A)n	SINE,Alu
chr1	11846104	C	T	0.00297	C1orf167,MTHFR	+,-	FALSE	L1ME4a	SINE,Alu
chr1	9161231	T	C	0.00481		.	FALSE	AluSx	SINE,Alu
chr1	145509570	A	G	0.00043	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	150446028	G	T	0.00624	RPRD2	+	FALSE
chr1	27204865	T	C	0.00132		.	FALSE	AluSx	SINE,Alu
chr3	72426059	T	A	0.00417	RYBP	-	FALSE
chr5	53181731	C	T	0.00707	ARL15	-	FALSE
chr1	120163247	T	C	0.00365	ZNF697	-	FALSE
chr1	27205224	T	C	0.00353		.	FALSE	AluSc	SINE,Alu
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chrX	54587249	A	G	0.00769	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr6	42857542	T	A	0.00029	RPL7L1	+	FALSE	MIRc	SINE,Alu
chr9	100777799	G	A	0.00675	ANP32B	+	FALSE
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr2	77745788	T	C	0.00000	LRRTM4	-	FALSE
chr1	16892277	G	T	0.00021	NBPF1	-	FALSE
chr1	54493259	T	C	0.00203	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	148556726	G	T	0.00023		.	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr1	1647902	A	T	0.00191	CDK11B,CDK11A	-	FALSE
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr6	32147696	G	A	6.22517E-06		.	FALSE
chr4	95586725	T	A	0.00743	PDLIM5	+	FALSE
chr1	28785597	G	C	0.00595	PHACTR4	+	FALSE
chr1	15992470	G	A	0.00605		.	FALSE
chr1	9643107	A	G	0.00859		.	FALSE	AluSx	SINE,Alu
chr1	6582470	T	C	0.00522	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	16912099	G	C	0.00928	NBPF1	-	FALSE
chr5	68463014	G	T	0.00011	CCNB1	+	FALSE
chr1	17735266	G	A	0.00471	RCC2	-	FALSE
chr4	187628395	T	A	0.00000	FAT1	-	FALSE
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr17	74560725	T	C	0.00476	SNHG16	+	FALSE	THE1B	SINE,Alu
chr4	6644327	A	G	0.00000	MRFAP1	+	FALSE
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr12	133297904	A	G	8.99170E-13	PGAM5	+	TRUE	AluJo	SINE,Alu
chr2	143638998	G	A	0.00496	KYNU	+	FALSE
chr3	141668922	T	C	0.00937	TFDP2	-	TRUE	AluSz	SINE,Alu
chr13	50273970	C	T	1.77946E-05	KPNA3	-	FALSE
chr5	14510067	G	T	0.00130	TRIO	+	FALSE
chr6	150045919	T	C	0.00206	NUP43	-	TRUE	AluSq	SINE,Alu
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr1	1717473	A	C	0.00925	GNB1	-	FALSE
chr14	53243411	T	C	0.00028	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr2	217366866	A	G	0.00247		.	FALSE	AluSz6	SINE,Alu
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	45120664	C	T	0.00437	TMEM53	-	FALSE
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	28825781	A	G	0.00166	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr6	42855962	A	G	0.00045	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	145688973	A	G	0.00017	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	17345246	A	T	0.00812	SDHB	-	FALSE
chr1	179044180	A	G	0.00416	FAM20B	+	TRUE	AluSx	SINE,Alu

RBP	MTPAP
Knock-Method	shRNA
RBP Family	PAP_assoc
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR701GSV
Platform	HiSeq
Pubmed ID	32252787

MTPAP - Target Gene Network