RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	157440644	G	C	0.00394	GPD2	+	FALSE
chr16	747231	T	G	0.00269	FBXL16	-	FALSE
chr1	151846854	T	G	0.00626	THEM4	-	FALSE	AluSx	SINE,Alu
chr1	46075663	A	G	0.00061	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	118589029	T	G	0.00058	DDX18	+	FALSE
chr2	30480670	G	T	0.00167	LBH	+	FALSE
chr1	145513031	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr2	203742324	T	C	0.00482		.	FALSE	AluJb	SINE,Alu
chr16	31469051	T	C	0.00278		.	FALSE	AluSz	SINE,Alu
chr1	6582176	T	C	0.00893	NOL9	-	TRUE	AluSq4	SINE,Alu
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr1	33148213	A	G	0.00958	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	19953120	G	A	0.00197	MINOS1,MINOS1-NBL1	+	FALSE
chr1	210416438	C	A	0.00085	SERTAD4	+	FALSE
chr12	52710721	G	C	0.00519	KRT83	-	FALSE
chr3	14986137	T	C	0.00132	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	186081819	C	T	3.85218E-06	CFAP97	-	FALSE
chr1	990806	G	A	0.00432	AGRN	+	FALSE
chr1	120163518	C	T	0.00646	ZNF697	-	FALSE
chr6	42856937	A	G	0.00122	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	206982358	T	C	0.00080		.	FALSE	AluSg7	SINE,Alu
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	33960062	A	G	0.00437	ZSCAN20	+	FALSE
chr1	36068370	T	C	3.60077E-09	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	65619242	A	G	0.00545	CRCP	+	TRUE	AluSz6	SINE,Alu
chr12	92537721	A	T	0.00057	BTG1	-	FALSE
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr17	67538540	T	C	0.00295		.	FALSE
chr1	205501469	A	G	0.00113	CDK18	+	FALSE
chr7	66421684	T	G	0.00042	TMEM248	+	FALSE	AluJr	SINE,Alu
chr5	125961918	G	A	0.00421	PHAX	+	FALSE	FLAM_C	SINE,Alu
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr1	32799434	C	T	0.00227	MARCKSL1	-	FALSE
chr6	150047370	T	C	0.00084	NUP43	-	TRUE	AluSc	SINE,Alu
chr2	219433597	G	A	0.00328	CNOT9	+	FALSE
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr3	160219829	C	T	0.00654	KPNA4	-	FALSE	(TA)n	SINE,Alu
chr5	34906692	T	C	0.00021	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	25894464	G	A	0.00527	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr5	68936027	G	A	0.00868		.	FALSE
chr1	117645998	A	G	0.00057		.	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr11	94801633	A	T	0.00808	SRSF8	+	FALSE
chr1	144909956	G	A	0.00310	NBPF20,PDE4DIP	+,-	FALSE
chr18	61565062	C	G	0.00207	SERPINB2	+	FALSE
chr7	99636950	A	G	0.00927	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr15	90820083	A	G	4.07036E-06		.	FALSE	AluY	SINE,Alu
chr4	177252327	A	G	3.52508E-05	SPCS3	+	TRUE
chr1	156163906	C	T	0.00130	SLC25A44	+	FALSE
chr3	45960560	T	A	0.00201	FYCO1	-	FALSE
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr10	100177984	C	T	6.55965E-05	HPS1	-	FALSE
chr5	40832557	G	T	0.00814	RPL37	-	FALSE
chr1	40539208	A	T	2.90582E-07	PPT1	-	FALSE
chr2	227660628	T	G	0.00025	IRS1	-	FALSE
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr1	36794250	A	G	0.00324		.	FALSE	AluJb	SINE,Alu
chr3	33458266	T	C	0.00035	UBP1	-	FALSE
chr1	68940885	G	A	0.00022	DEPDC1	-	FALSE	MIR	SINE,Alu
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr2	86249962	T	C	0.00443	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr14	75203036	A	G	0.00837	FCF1	+	TRUE	AluSx	SINE,Alu
chr7	130629624	T	C	0.00435	LINC-PINT	-	TRUE
chr1	145689533	A	G	0.00051	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr3	32207907	T	C	0.00922	GPD1L	+	FALSE
chr1	164820482	T	A	0.00045	PBX1	+	FALSE
chr10	71909957	G	T	0.00853		.	FALSE
chr1	9160982	T	C	0.00304		.	FALSE	AluJb	SINE,Alu
chr7	44841238	T	A	0.00108	PPIA	+	FALSE
chr5	79923424	T	C	0.00054	DHFR	-	TRUE	AluJr	SINE,Alu
chr5	56177845	A	T	0.00420	MAP3K1	+	FALSE
chr1	200941185	T	G	0.00729	KIF21B	-	FALSE
chr3	75779573	A	G	0.00530	ZNF717	-	FALSE
chr2	203742126	T	C	0.00451		.	FALSE	AluJb	SINE,Alu
chr1	58999651	T	G	0.00484	OMA1	-	FALSE
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr1	36067925	T	C	1.81623E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr19	46214293	C	T	0.00137	FBXO46	-	FALSE
chr3	45721891	A	G	0.00417	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	40214313	A	G	0.00330	PPIE	+	TRUE	AluSq2	SINE,Alu
chr7	158525786	G	A	0.00453	ESYT2	-	FALSE
chr1	100658578	G	A	0.00012	DBT	-	FALSE
chr1	15988702	T	C	0.00362		.	FALSE
chr1	11084103	T	A	0.00118	TARDBP	+	FALSE
chr1	145324364	C	G	0.00343	NBPF20,NBPF10	+	FALSE
chr20	43954058	G	C	0.00876	SDC4	-	FALSE
chr1	45976260	C	T	0.00043	MMACHC	+	FALSE
chr2	61764920	C	A	0.00662	XPO1	-	FALSE
chr1	171501831	A	G	0.00040	PRRC2C	+	FALSE
chr7	32529936	G	C	0.00027	LSM5	-	FALSE
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr19	19792444	A	G	0.00686	ZNF101	+	TRUE	AluJb	SINE,Alu
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr3	160969268	C	T	0.00375	NMD3	+	FALSE
chr1	51822219	G	A	0.00325	EPS15	-	FALSE
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr1	89851328	A	G	0.00028	GBP6	+	FALSE	AluSz	SINE,Alu
chr2	209221291	T	G	0.00020	PIKFYVE	+	FALSE	AluSx	SINE,Alu
chr1	183105534	T	C	0.00125	LAMC1	+	FALSE
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr1	87328403	A	T	0.00946	SEP15	-	FALSE
chr5	87566382	T	A	0.00997	TMEM161B-AS1	+	FALSE
chr1	114940210	T	G	0.00028	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	148748257	C	G	0.00989	HLTF	-	FALSE
chr12	100562935	G	T	0.00074	GOLGA2P5	-	FALSE	AluSg	SINE,Alu
chr1	202848587	G	A	2.63176E-05	RABIF	-	FALSE
chr2	160659996	G	A	0.00177	LY75-CD302,LY75	-	FALSE
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	46076462	A	G	1.23194E-07	NASP	+	TRUE	AluSx	SINE,Alu
chr16	2821028	G	T	9.74054E-05	SRRM2	+	FALSE
chr3	88191444	A	C	0.00020	CGGBP1,ZNF654	+,-	FALSE
chr3	141879765	T	C	0.00212	GK5	-	TRUE	AluJr	SINE,Alu
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	145329095	C	G	0.00261	NBPF20,NBPF10	+	FALSE
chr12	125269489	C	T	0.00817	SCARB1	-	FALSE
chr1	54493197	T	C	0.00064	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr7	44841589	A	G	0.00469	PPIA	+	TRUE	AluJr	SINE,Alu
chr4	185397529	A	G	0.00116		.	FALSE	FRAM	SINE,Alu
chr5	130537710	A	G	0.00899	LYRM7	+	TRUE	AluJb	SINE,Alu
chr2	10586899	G	A	0.00312	ODC1,SNORA80B	-	FALSE
chr2	47137976	T	C	0.00398	MCFD2	-	TRUE	AluJr	SINE,Alu
chr3	120115286	T	G	0.00077	FSTL1	-	FALSE
chr2	114352238	G	A	8.42668E-06	WASH2P	+	FALSE
chr1	15755550	A	C	0.00969	EFHD2	+	FALSE
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr7	22983702	A	T	7.71363E-07	FAM126A	-	FALSE
chr1	201846630	C	A	0.00212	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr1	28662254	A	G	0.00052	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr6	71299074	A	G	0.00824		.	FALSE	AluSx1	SINE,Alu
chr1	19543249	T	C	0.00559	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr13	114748384	C	T	0.00050	RASA3	-	FALSE
chr1	10517564	T	C	0.00371		.	FALSE	AluSx1	SINE,Alu
chr14	53242417	T	C	0.00423	GNPNAT1	-	TRUE	AluJo	SINE,Alu
chr1	214524633	T	A	0.00017	PTPN14	-	FALSE	Alu	SINE,Alu
chr2	220406239	T	G	0.00035	CHPF	-	FALSE	MIRb	SINE,Alu
chr12	27848053	A	T	0.00090	PPFIBP1	+	FALSE
chr1	101372409	T	C	0.00203	SLC30A7	+	FALSE
chr5	149829071	T	C	0.00360	RPS14	-	FALSE
chr1	45975498	A	G	9.09033E-05	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	11979809	A	C	0.00525	KIAA2013	-	FALSE
chr1	32799435	A	T	0.00515	MARCKSL1	-	FALSE
chr1	76255228	G	A	0.00073	RABGGTB,SNORD45B	+	FALSE
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr10	15120275	T	C	0.00017	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr12	125512494	A	G	0.00427		.	FALSE	AluY	SINE,Alu
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr5	128430757	T	C	0.00338	ISOC1	+	FALSE
chr19	3467756	C	T	0.00485	NFIC	+	FALSE	(TA)n	SINE,Alu
chr1	3745924	G	A	0.00612	CEP104	-	FALSE
chr4	2940165	T	C	0.00201	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr5	10435491	G	A	0.00606	MARCH6	+	FALSE
chr1	20977221	A	T	0.00116	PINK1,PINK1-AS	+,-	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	93616202	T	C	0.00055	TMED5	-	FALSE
chr3	10192744	A	G	3.36147E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	20401854	A	T	2.80783E-05	SDC1	-	FALSE
chr12	56215099	T	A	0.00227	DNAJC14	-	FALSE
chr1	116609833	G	A	0.00012	SLC22A15	+	FALSE
chr3	195404649	A	G	0.00624	SDHAP2	+	FALSE
chr1	240255560	G	A	0.00810	FMN2	+	FALSE	(GGC)n	SINE,Alu
chr1	184661942	T	G	0.00343	EDEM3	-	FALSE
chr1	46125880	T	C	0.00686	GPBP1L1	-	FALSE
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr2	176792357	A	G	7.02808E-05	LNPK	-	FALSE
chr1	19586458	A	G	7.27253E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	179326925	C	T	0.00284	SOAT1	+	FALSE	AluJo	SINE,Alu
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr1	10518831	T	C	0.00410		.	FALSE	AluSx1	SINE,Alu
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr1	214524178	T	C	0.00265	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	33149256	A	G	0.00010	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	32661564	C	T	0.00058	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	19543797	T	C	0.00754	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr12	27953264	A	T	0.00688	KLHL42	+	FALSE
chr15	101845309	A	G	0.00689	PCSK6	-	FALSE
chr16	10625050	T	C	1.54421E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	110912873	T	C	0.00116	SLC16A4	-	FALSE
chrX	123046779	A	G	0.00629	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr2	164466037	A	T	0.00090	FIGN	-	FALSE
chr1	33960062	A	G	0.00064	ZSCAN20	+	FALSE
chr1	151027536	G	C	0.00518	CDC42SE1	-	FALSE
chr20	43996145	T	A	0.00611	SYS1-DBNDD2,SYS1	+	FALSE
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr9	124103030	G	A	0.00193	STOM	-	FALSE	AluSq2	SINE,Alu
chr1	148751869	A	G	0.00011		.	FALSE
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	206980072	G	A	1.35396E-05		.	FALSE	MLT1A1	SINE,Alu
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chr1	161753841	G	A	0.00039	ATF6	+	FALSE
chr9	116812614	A	G	0.00674	ZNF618	+	FALSE
chr1	25688276	A	G	0.00187	TMEM50A	+	FALSE
chr1	157044418	G	C	0.00707		.	FALSE
chr4	84215880	T	C	4.10546E-05	HPSE	-	TRUE	AluJr	SINE,Alu
chr2	198416735	T	G	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	48764419	C	T	0.00478	SPATA6	-	FALSE
chr1	145281633	C	A	0.00022	NBPF20,NOTCH2NL	+	FALSE
chr10	13687171	T	C	0.00033	FRMD4A	-	FALSE
chr14	36784095	C	T	0.00866	MBIP	-	FALSE
chr3	48787118	T	C	0.00248	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	1252510	T	C	1.62601E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr2	10050947	T	C	0.00273	TAF1B	+	FALSE
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr5	180682608	C	A	0.00144	CTC-338M12.4	+	FALSE
chr4	17802783	T	C	0.00509	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	206987108	T	C	0.00015		.	FALSE	AluSx	SINE,Alu
chr2	55516903	G	A	3.31807E-05	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	118409491	A	T	0.00471	GDAP2	-	FALSE	(A)n	SINE,Alu
chr17	57279167	A	G	6.96573E-05	PRR11	+	TRUE	AluSq2	SINE,Alu
chr14	75202553	A	G	0.00014	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr2	99772827	A	G	4.47582E-05	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	93826775	T	C	0.00172	DR1	+	FALSE
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr5	17276088	C	A	0.00171	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	10521170	T	C	0.00104	DFFA	-	TRUE	AluY	SINE,Alu
chr1	179042551	A	G	0.00336	FAM20B	+	TRUE	AluSx1	SINE,Alu
chrX	123047295	A	G	9.23037E-05	XIAP	+	FALSE	AluSx	SINE,Alu
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr2	74442407	A	G	0.00384	MTHFD2	+	FALSE
chr1	24022437	A	G	0.00342	RPL11	+	FALSE
chr2	10198113	C	A	0.00893	CYS1	-	FALSE
chr1	1431295	T	C	0.00400	ATAD3B	+	FALSE
chr1	10519048	T	C	0.00728		.	FALSE	AluSx3	SINE,Alu
chr1	220870440	G	A	0.00193	C1orf115	+	FALSE
chr3	195451488	C	T	1.73907E-06	MUC20	+	FALSE
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr2	223765491	C	T	0.00689	ACSL3	+	FALSE
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr7	116339672	C	T	0.00876	MET	+	FALSE
chr1	161160459	T	C	0.00270	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr7	295960	T	A	2.17882E-07	FAM20C	+	FALSE
chr1	52381348	T	G	0.00500	RAB3B	-	FALSE
chr5	130540369	C	A	0.00126	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	11347155	C	T	0.00273	UBIAD1	+	FALSE
chr1	15905501	G	A	0.00359	AGMAT	-	FALSE
chr1	36068370	T	C	0.00846	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	120539691	G	T	0.00350	NOTCH2	-	FALSE
chr22	33257373	G	A	0.00581	SYN3,TIMP3	+,-	FALSE
chr3	5258985	T	C	1.48069E-09	EDEM1	+	FALSE
chr1	153643449	G	C	0.00704	ILF2	-	FALSE
chr1	32372360	C	T	0.00697	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr8	144681777	G	T	0.00383	TIGD5	+	FALSE
chr1	20977856	T	C	0.00232	PINK1,PINK1-AS	+,-	FALSE
chr1	25894472	C	G	0.00594	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	10519932	T	C	0.00547		.	FALSE	AluJr	SINE,Alu
chr1	145512950	A	G	0.00996	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr5	40832551	A	T	5.78892E-08	RPL37	-	FALSE
chr1	144053567	C	T	0.00037		.	FALSE
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr12	7045885	A	C	0.00473	ATN1	+	FALSE	(CAG)n	SINE,Alu
chr2	75888160	A	C	0.00368	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr6	26095468	A	G	0.00980	HFE	+	TRUE	AluY	SINE,Alu
chr5	176026131	A	T	0.00979	GPRIN1	-	FALSE
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr1	36770599	G	T	0.00123	THRAP3	+	FALSE	(T)n	SINE,Alu
chr8	23049112	T	C	0.00774	TNFRSF10A	-	TRUE
chr1	16935130	C	T	0.00288	NBPF1	-	FALSE
chr19	39433139	T	G	0.00235	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	43629979	G	T	0.00470	EBNA1BP2	-	FALSE
chr8	42883403	A	G	0.00204	HOOK3	+	TRUE	AluJb	SINE,Alu
chr1	19542250	T	C	3.30618E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	85647107	T	C	0.00255	SYDE2	-	TRUE	AluSx	SINE,Alu
chr7	137561076	A	G	0.00488	CREB3L2	-	FALSE
chr1	179811337	C	A	0.00670	TOR1AIP2	-	FALSE	AluSp	SINE,Alu
chr1	47140872	T	C	0.00081	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	16912138	A	G	0.00197	NBPF1	-	FALSE
chr1	145689566	A	G	0.00331	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr2	32532840	A	G	0.00243		.	FALSE	AluSx1	SINE,Alu
chr3	195242996	C	A	0.00136	PPP1R2	-	FALSE
chr1	85785556	A	C	0.00034	DDAH1	-	FALSE
chr5	31553968	T	C	0.00555	C5orf22	+	FALSE
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr4	119526740	C	G	0.00435	LOC729218	+	FALSE
chr2	217366911	A	G	0.00449		.	FALSE	AluSz6	SINE,Alu
chr16	81064440	A	G	0.00409	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr1	36067760	T	C	0.00032	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	94983203	C	T	0.00686	ABCD3	+	FALSE
chr19	11256725	T	C	7.46879E-09	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	19543457	T	C	0.00101	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr14	53243394	T	C	0.00957	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	204525667	A	G	3.94227E-05	MDM4	+	TRUE	AluSz	SINE,Alu
chr19	23542304	T	C	2.38814E-05	ZNF91	-	TRUE	AluY	SINE,Alu
chr19	39874945	T	C	0.00335	SAMD4B	+	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr3	88191439	A	C	0.00657	CGGBP1,ZNF654	+,-	FALSE
chr6	31657413	T	C	0.00066		.	FALSE
chr1	179044309	A	G	0.00558	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	67874731	T	C	0.00565	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr3	181430146	C	A	0.00256	SOX2-OT,SOX2	+	FALSE
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr4	3514695	A	G	1.35580E-12	LRPAP1	-	FALSE
chr4	103183510	C	T	0.00718	SLC39A8	-	FALSE
chr9	125609943	A	G	0.00247		.	FALSE
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr9	115447528	T	C	0.00112	INIP	-	TRUE	AluJb	SINE,Alu
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr1	3546128	A	G	0.00703	TPRG1L	+	FALSE	AluSz	SINE,Alu

RBP	PAPOLA
Knock-Method	shRNA
RBP Family	PAP_RNA-bind
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR368ZRP
Platform	HiSeq
Pubmed ID	32252787

PAPOLA - Target Gene Network