| chr4 | 170017406 | A | T | 0.00534 | SH3RF1 | - | FALSE | | |
| chr3 | 183534170 | C | T | 0.00090 | MAP6D1 | - | FALSE | | |
| chr1 | 27107651 | A | T | 0.00200 | ARID1A | + | FALSE | (A)n | SINE,Alu |
| chr5 | 180262080 | A | G | 0.00259 | LINC00847 | + | TRUE | MLT2B3 | SINE,Alu |
| chr4 | 25279320 | G | A | 1.66733E-12 | PI4K2B | + | FALSE | | |
| chr1 | 10520117 | T | C | 0.00188 | | . | FALSE | AluSx | SINE,Alu |
| chr1 | 109746601 | A | G | 0.00024 | KIAA1324 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 121133733 | G | A | 0.00552 | SRGAP2-AS1,SRGAP2B,SRGAP2C | +,- | FALSE | L1MB4 | SINE,Alu |
| chr9 | 131093336 | T | C | 0.00397 | COQ4 | + | FALSE | AluY | SINE,Alu |
| chr1 | 36067811 | T | C | 0.00467 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr3 | 10356760 | G | A | 0.00951 | SEC13 | - | FALSE | MIRb | SINE,Alu |
| chr2 | 61413040 | T | A | 0.00675 | AHSA2 | + | FALSE | (ATTTTAT)n | SINE,Alu |
| chr21 | 34728144 | A | G | 2.75061E-05 | IFNAR1 | + | TRUE | AluSc | SINE,Alu |
| chr2 | 174086933 | C | A | 0.00457 | ZAK,MLK7-AS1 | +,- | FALSE | AluJo | SINE,Alu |
| chr3 | 169492101 | C | T | 0.00402 | MYNN | + | FALSE | | |
| chr3 | 75475670 | A | C | 0.00506 | FAM86DP | - | FALSE | | |
| chr3 | 52567617 | A | G | 0.00025 | NT5DC2 | - | FALSE | G-rich | SINE,Alu |
| chr2 | 208466270 | A | G | 0.00713 | CREB1,METTL21A | +,- | FALSE | | |
| chr1 | 183213770 | G | C | 0.00734 | LAMC2 | + | FALSE | | |
| chr5 | 96498783 | G | A | 0.00056 | RIOK2 | - | FALSE | | |
| chr22 | 17129526 | A | G | 0.00485 | TPTEP1 | + | TRUE | AluSz | SINE,Alu |
| chr22 | 39259541 | A | G | 0.00134 | CBX6 | - | FALSE | | |
| chr1 | 28261657 | C | T | 0.00327 | SMPDL3B | + | FALSE | | |
| chr22 | 18571474 | A | G | 1.16198E-07 | PEX26 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 145511962 | A | G | 0.00187 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluY | SINE,Alu |
| chr3 | 10192617 | A | G | 2.94246E-06 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr12 | 92537702 | T | A | 0.00368 | BTG1 | - | FALSE | | |
| chr5 | 65452100 | G | T | 0.00600 | SREK1 | + | FALSE | (TTTTTG)n | SINE,Alu |
| chr1 | 148251083 | T | C | 0.00041 | NBPF8,NBPF14,NBPF9 | - | FALSE | L1MC4 | SINE,Alu |
| chr1 | 16933740 | T | A | 0.00286 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr1 | 23833608 | G | A | 0.00890 | E2F2 | - | FALSE | | |
| chr1 | 95660026 | G | T | 0.00129 | TMEM56-RWDD3,LOC101928118,TMEM56 | +,- | FALSE | | |
| chr1 | 45975345 | A | G | 0.00614 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr1 | 11084104 | G | A | 0.00116 | TARDBP | + | FALSE | | |
| chr1 | 202861470 | C | A | 0.00441 | KLHL12 | - | FALSE | | |
| chr3 | 195243006 | C | A | 7.17300E-06 | PPP1R2 | - | FALSE | | |
| chr14 | 31916784 | T | C | 2.67040E-06 | LOC101927124,DTD2 | +,- | FALSE | AluSc8 | SINE,Alu |
| chr3 | 133538762 | A | T | 0.00804 | SRPRB | + | FALSE | | |
| chr1 | 31732514 | C | T | 0.00588 | SNRNP40 | - | FALSE | | |
| chr3 | 99886662 | G | A | 0.00011 | CMSS1 | + | FALSE | | |
| chr22 | 18572730 | A | G | 6.64824E-05 | PEX26 | + | TRUE | AluYf1 | SINE,Alu |
| chr2 | 56150885 | G | A | 0.00624 | EFEMP1 | - | FALSE | | |
| chr5 | 175803244 | A | G | 0.00245 | | . | FALSE | AluSc8 | SINE,Alu |
| chr3 | 56763328 | T | C | 0.00546 | ARHGEF3 | - | FALSE | | |
| chr17 | 41144609 | G | A | 0.00821 | RUNDC1 | + | FALSE | | |
| chr1 | 20976078 | T | C | 0.00344 | PINK1,PINK1-AS | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 16945452 | C | T | 0.00184 | CROCCP2 | - | FALSE | | |
| chr3 | 15113847 | T | C | 0.00026 | RBSN | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 10518875 | T | C | 0.00127 | | . | FALSE | AluSx1 | SINE,Alu |
| chr1 | 28662199 | A | G | 0.00011 | MED18 | + | TRUE | AluSq2 | SINE,Alu |
| chr1 | 11847346 | G | C | 0.00547 | C1orf167,MTHFR | +,- | FALSE | | |
| chr14 | 23795204 | G | T | 0.00938 | BCL2L2-PABPN1,PABPN1 | + | FALSE | | |
| chr1 | 1469546 | G | A | 0.00300 | ATAD3A | + | FALSE | | |
| chr5 | 79923424 | T | C | 0.00054 | DHFR | - | TRUE | AluJr | SINE,Alu |
| chr5 | 115428334 | G | T | 0.00265 | COMMD10 | + | FALSE | | |
| chr4 | 119553307 | T | C | 0.00096 | LOC729218 | + | FALSE | | |
| chr1 | 109747437 | A | G | 0.00104 | KIAA1324 | + | TRUE | AluJr4 | SINE,Alu |
| chr19 | 11256702 | T | C | 6.98885E-06 | SPC24 | - | TRUE | AluJr4 | SINE,Alu |
| chr1 | 3546269 | C | A | 0.00260 | TPRG1L | + | FALSE | AluSz | SINE,Alu |
| chr16 | 75479910 | T | C | 0.00026 | TMEM170A | - | TRUE | AluSg4 | SINE,Alu |
| chr1 | 220231959 | T | C | 0.00464 | RNU5F-1,BPNT1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 19542458 | T | C | 0.00113 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr2 | 227597207 | T | C | 0.00209 | IRS1 | - | FALSE | (TA)n | SINE,Alu |
| chrX | 77083981 | T | C | 0.00647 | MAGT1 | - | TRUE | AluSz | SINE,Alu |
| chr16 | 10623553 | T | C | 0.00024 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 90493918 | G | A | 0.00166 | ZNF326 | + | FALSE | | |
| chr1 | 183486859 | G | A | 0.00831 | SMG7 | + | FALSE | | |
| chr1 | 26143725 | A | T | 0.00988 | SEPN1 | + | FALSE | AluSx | SINE,Alu |
| chr5 | 118174735 | T | C | 0.00139 | DTWD2 | - | TRUE | AluY | SINE,Alu |
| chr1 | 153617980 | A | G | 8.13079E-05 | CHTOP | + | FALSE | | |
| chr1 | 120611960 | C | T | 0.00062 | NOTCH2 | - | FALSE | | |
| chr2 | 70452144 | T | G | 0.00191 | TIA1 | - | FALSE | | |
| chr1 | 52520866 | C | T | 0.00195 | TXNDC12 | - | FALSE | | |
| chr2 | 206982255 | T | C | 0.00431 | | . | FALSE | AluSg7 | SINE,Alu |
| chr2 | 174090320 | T | A | 0.00174 | ZAK,MLK7-AS1 | +,- | FALSE | AluSx | SINE,Alu |
| chr1 | 1650797 | A | G | 0.00276 | CDK11B,CDK11A | - | FALSE | | |
| chr1 | 179045672 | G | A | 0.00920 | FAM20B | + | FALSE | | |
| chr1 | 46662492 | G | A | 9.93078E-05 | POMGNT1 | - | FALSE | | |
| chr6 | 47200348 | T | C | 0.00274 | TNFRSF21 | - | FALSE | | |
| chr3 | 119212015 | G | A | 0.00024 | POGLUT1 | + | FALSE | | |
| chr1 | 171561203 | T | G | 0.00075 | PRRC2C | + | FALSE | | |
| chr1 | 16787985 | A | G | 0.00053 | | . | FALSE | AluSz | SINE,Alu |
| chr4 | 17802890 | T | C | 0.00303 | DCAF16 | - | TRUE | AluSz | SINE,Alu |
| chr19 | 17412218 | C | T | 0.00790 | ABHD8 | - | FALSE | | |
| chr1 | 6283305 | T | C | 0.00554 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 19586532 | A | G | 0.00188 | MRTO4 | + | TRUE | AluSz | SINE,Alu |
| chr10 | 81114959 | C | T | 0.00048 | PPIF | + | FALSE | MSTA | SINE,Alu |
| chr5 | 139931631 | G | C | 0.00138 | SRA1 | - | FALSE | | |
| chr19 | 200571 | T | C | 0.00079 | LINC01002 | - | FALSE | | |
| chr6 | 90344605 | T | C | 0.00013 | LYRM2 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 205737682 | A | G | 0.00320 | RAB29 | - | FALSE | AluSq2 | SINE,Alu |
| chr2 | 37328097 | T | C | 0.00301 | | . | FALSE | | |
| chr1 | 44088117 | G | T | 0.00731 | PTPRF | + | FALSE | (T)n | SINE,Alu |
| chr3 | 32524229 | G | T | 0.00359 | CMTM6 | - | FALSE | | |
| chr1 | 16945227 | G | T | 0.00090 | CROCCP2 | - | FALSE | | |
| chr1 | 28661657 | A | G | 0.00910 | MED18 | + | TRUE | AluSg | SINE,Alu |
| chr12 | 32794600 | A | C | 5.34959E-05 | FGD4 | + | FALSE | | |
| chr1 | 149913733 | T | C | 0.00143 | OTUD7B | - | TRUE | MER96B | SINE,Alu |
| chr1 | 14106402 | A | T | 0.00914 | PRDM2 | + | FALSE | | |
| chr2 | 24522807 | C | T | 0.00079 | ITSN2 | - | FALSE | | |
| chr1 | 53291434 | A | G | 0.00124 | ZYG11B | + | TRUE | AluJr | SINE,Alu |
| chr16 | 10624997 | T | C | 1.19407E-05 | EMP2 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 19585519 | A | G | 3.44907E-05 | MRTO4 | + | TRUE | AluSc8 | SINE,Alu |
| chr1 | 10520487 | T | C | 0.00559 | | . | FALSE | AluSx1 | SINE,Alu |
| chr2 | 37328016 | T | C | 5.08368E-07 | | . | FALSE | | |
| chr4 | 17629933 | A | G | 0.00504 | | . | FALSE | MER90 | SINE,Alu |
| chr2 | 37230734 | C | T | 0.00192 | HEATR5B | - | FALSE | | |
| chr1 | 43272841 | A | T | 0.00029 | SVBP | - | FALSE | | |
| chr7 | 137561076 | A | G | 0.00488 | CREB3L2 | - | FALSE | | |
| chr1 | 67518534 | C | T | 0.00682 | SLC35D1 | - | FALSE | | |
| chr17 | 65335253 | T | C | 0.00344 | PSMD12 | - | TRUE | AluSx | SINE,Alu |
| chr4 | 2940371 | T | C | 0.00905 | NOP14-AS1,NOP14 | +,- | FALSE | AluJo | SINE,Alu |
| chr4 | 3769307 | C | A | 0.00173 | ADRA2C | + | FALSE | | |
| chr2 | 219134117 | C | T | 0.00357 | AAMP | - | FALSE | | |
| chr2 | 224622277 | T | C | 0.00138 | AP1S3 | - | TRUE | AluSx1 | SINE,Alu |
| chrX | 123046306 | A | G | 0.00016 | XIAP | + | TRUE | AluJb | SINE,Alu |
| chr4 | 57327058 | A | G | 0.00129 | PAICS | + | TRUE | AluSx1 | SINE,Alu |
| chr16 | 10623706 | T | C | 0.00064 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 68940885 | G | A | 0.00500 | DEPDC1 | - | FALSE | MIR | SINE,Alu |
| chr1 | 566678 | C | T | 0.00559 | | . | FALSE | | |
| chr1 | 36316571 | A | C | 0.00893 | AGO4 | + | FALSE | | |
| chr1 | 33148362 | A | T | 0.00870 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr1 | 19542401 | T | C | 0.00077 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr3 | 98304403 | G | A | 0.00997 | CPOX | - | FALSE | | |
| chr1 | 155853061 | A | G | 0.00146 | SYT11 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 28825331 | A | G | 1.84239E-05 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 144922523 | C | T | 0.00566 | NBPF20,PDE4DIP | +,- | FALSE | | |
| chr1 | 28261662 | A | G | 0.01000 | SMPDL3B | + | FALSE | | |
| chr1 | 109818159 | G | T | 0.00036 | CELSR2 | + | FALSE | | |
| chr1 | 10521238 | T | C | 0.00096 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr1 | 145282799 | G | A | 0.00882 | NBPF20,NOTCH2NL | + | FALSE | | |
| chr19 | 53155625 | T | C | 0.00074 | ZNF83 | - | TRUE | AluSg | SINE,Alu |
| chr12 | 98943103 | A | G | 0.00528 | TMPO | + | TRUE | AluSz | SINE,Alu |
| chr1 | 149581866 | C | G | 0.00774 | LINC00623,LINC00869,LOC103091866 | + | FALSE | L2b | SINE,Alu |
| chr1 | 179072966 | C | T | 0.00107 | ABL2 | - | FALSE | MIRc | SINE,Alu |
| chr1 | 10517659 | T | C | 0.00012 | | . | FALSE | AluSx1 | SINE,Alu |
| chr2 | 10923581 | C | T | 0.00593 | ATP6V1C2,PDIA6 | +,- | FALSE | | |
| chr1 | 16953672 | C | T | 0.00243 | CROCCP2 | - | FALSE | | |
| chr3 | 99517479 | T | C | 8.06312E-05 | MIR548G | - | FALSE | (TG)n | SINE,Alu |
| chr3 | 196555443 | C | A | 3.82991E-09 | PAK2 | + | FALSE | | |
| chr1 | 6475348 | C | A | 4.73725E-05 | HES2 | - | FALSE | Tigger1 | SINE,Alu |
| chrX | 2824916 | T | C | 6.31541E-06 | ARSD | - | TRUE | AluSx1 | SINE,Alu |
| chr16 | 88785189 | T | C | 0.00636 | PIEZO1 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 144909956 | G | A | 0.00310 | NBPF20,PDE4DIP | +,- | FALSE | | |
| chr19 | 3121451 | C | T | 0.00567 | GNA11 | + | FALSE | | |
| chr20 | 45839074 | A | T | 0.00019 | ZMYND8 | - | FALSE | (T)n | SINE,Alu |
| chr20 | 43707842 | A | G | 0.00100 | STK4 | + | TRUE | AluJb | SINE,Alu |
| chr14 | 50792933 | C | T | 0.00156 | ATP5S | + | FALSE | AluSx | SINE,Alu |
| chr1 | 28661767 | A | G | 0.00144 | MED18 | + | TRUE | AluSg | SINE,Alu |
| chr7 | 6501820 | A | T | 0.00288 | KDELR2 | - | FALSE | | |
| chr2 | 37331038 | T | C | 4.65669E-05 | | . | FALSE | AluSx1 | SINE,Alu |
| chr6 | 43747963 | G | C | 0.00274 | VEGFA | + | FALSE | | |
| chr5 | 76372541 | G | C | 0.00498 | ZBED3 | - | FALSE | | |
| chr3 | 195694454 | C | T | 0.00092 | SDHAP1 | - | FALSE | | |
| chr2 | 61764922 | G | C | 0.00679 | XPO1 | - | FALSE | | |
| chr1 | 59122910 | G | A | 0.00251 | MYSM1 | - | FALSE | | |
| chr1 | 183094547 | T | C | 0.00277 | LAMC1 | + | FALSE | | |
| chr1 | 45975358 | A | G | 0.00020 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr1 | 46077218 | A | G | 0.00783 | NASP | + | TRUE | AluSc8 | SINE,Alu |
| chr1 | 10520902 | A | T | 0.00032 | DFFA | - | FALSE | | |
| chr17 | 49041732 | T | C | 0.00135 | SPAG9 | - | TRUE | AluSx | SINE,Alu |
| chr5 | 40832552 | G | T | 1.14652E-07 | RPL37 | - | FALSE | | |
| chr3 | 5258985 | T | C | 1.48069E-09 | EDEM1 | + | FALSE | | |
| chr1 | 987670 | T | G | 0.00148 | AGRN | + | FALSE | | |
| chr1 | 145512078 | A | G | 0.00099 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 10519200 | T | C | 0.00059 | | . | FALSE | AluSx3 | SINE,Alu |
| chr1 | 10519947 | T | C | 0.00184 | | . | FALSE | AluJr | SINE,Alu |
| chr1 | 145500919 | C | T | 0.00029 | NBPF20,NBPF10,LIX1L | + | FALSE | | |
| chr1 | 45976723 | T | C | 0.00733 | MMACHC,PRDX1 | +,- | FALSE | | |
| chr2 | 99812450 | A | G | 7.07141E-05 | MRPL30 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 247353355 | G | A | 0.00628 | | . | FALSE | | |
| chr1 | 109476363 | A | G | 0.00172 | GPSM2,CLCC1 | +,- | FALSE | | |
| chr3 | 15112398 | T | C | 2.78799E-05 | RBSN | - | TRUE | AluSq2 | SINE,Alu |
| chr7 | 44917406 | T | C | 0.00021 | PURB | - | TRUE | AluSz | SINE,Alu |
| chr3 | 194124421 | A | G | 0.00024 | ATP13A3 | - | FALSE | | |
| chr2 | 128602974 | A | T | 4.23982E-05 | | . | FALSE | AluSp | SINE,Alu |
| chr1 | 225707043 | T | C | 2.18813E-07 | ENAH | - | FALSE | | |
| chr1 | 28825418 | A | G | 0.00046 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr2 | 204301752 | G | C | 0.00029 | RAPH1 | - | FALSE | | |
| chr1 | 148023067 | C | T | 0.00772 | NBPF8 | - | FALSE | | |
| chr3 | 172224303 | A | G | 0.00524 | TNFSF10 | - | FALSE | | |
| chr1 | 148556726 | G | T | 0.00976 | | . | FALSE | | |
| chr1 | 40537947 | A | C | 0.00295 | CAP1 | + | FALSE | | |
| chr1 | 92862904 | A | G | 0.00279 | | . | FALSE | AluJr | SINE,Alu |
| chr6 | 150047362 | T | C | 0.00076 | NUP43 | - | TRUE | AluSc | SINE,Alu |
| chr9 | 96438974 | C | G | 0.00083 | PHF2 | + | FALSE | (CTCCAC)n | SINE,Alu |
| chr1 | 144821900 | C | G | 6.24876E-05 | NBPF20,NBPF9 | + | FALSE | | |
| chr1 | 93826819 | A | T | 0.00086 | DR1 | + | FALSE | (GTTTT)n | SINE,Alu |
| chr1 | 36068210 | T | C | 0.00178 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr8 | 104082307 | C | T | 0.00675 | ATP6V1C1 | + | FALSE | L1ME3G | SINE,Alu |
| chr2 | 61705067 | A | T | 0.00084 | | . | FALSE | | |
| chr1 | 10520725 | T | C | 0.00795 | DFFA | - | TRUE | AluSc8 | SINE,Alu |
| chr1 | 231557138 | C | G | 0.00394 | EGLN1 | - | FALSE | | |
| chr1 | 25894468 | C | G | 0.00265 | LDLRAP1 | + | FALSE | MIRb | SINE,Alu |
| chr3 | 48787633 | T | C | 0.00314 | PRKAR2A | - | TRUE | AluSp | SINE,Alu |
| chr1 | 145513098 | A | G | 0.00067 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluSz6 | SINE,Alu |
| chr5 | 56177872 | A | G | 0.00618 | MAP3K1 | + | TRUE | (CAA)n | SINE,Alu |
| chr3 | 33893987 | A | G | 0.00123 | PDCD6IP | + | FALSE | | |
| chr17 | 41144581 | A | C | 0.00806 | RUNDC1 | + | FALSE | AluSx | SINE,Alu |
| chr1 | 27107669 | T | A | 0.00636 | ARID1A | + | FALSE | (A)n | SINE,Alu |
| chr1 | 154554945 | A | G | 0.00877 | ADAR | - | FALSE | | |
| chr3 | 101405564 | G | A | 0.00354 | | . | FALSE | | |
| chr4 | 39551140 | T | C | 1.44695E-08 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr4 | 178281754 | G | A | 0.00057 | NEIL3 | + | FALSE | | |
| chr14 | 70838368 | T | C | 0.00561 | SYNJ2BP-COX16,SYNJ2BP | - | TRUE | AluSg | SINE,Alu |
| chr1 | 10521238 | T | C | 0.00232 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr1 | 39908506 | G | A | 0.00079 | MACF1 | + | FALSE | | |
| chr1 | 38326728 | T | C | 0.00079 | INPP5B | - | TRUE | AluJr | SINE,Alu |
| chr1 | 201846635 | A | T | 0.00293 | IPO9 | + | FALSE | (CA)n | SINE,Alu |
| chr3 | 48485452 | T | A | 0.00363 | TMA7 | + | FALSE | | |
| chr16 | 81422951 | T | C | 0.00074 | | . | FALSE | | |
| chr2 | 204082516 | G | A | 0.00094 | NBEAL1 | + | FALSE | | |
| chr1 | 68940887 | T | G | 0.00293 | DEPDC1 | - | FALSE | MIR | SINE,Alu |
| chr10 | 13234356 | A | T | 3.19668E-07 | MCM10 | + | FALSE | | |
| chr1 | 70718278 | C | G | 0.00663 | | . | FALSE | | |
| chr4 | 6644457 | G | A | 0.00059 | MRFAP1 | + | FALSE | | |
| chr2 | 87883323 | A | G | 0.00910 | | . | FALSE | | |
| chr4 | 144475125 | T | G | 0.00133 | SMARCA5 | + | FALSE | | |
| chr1 | 156495521 | C | A | 0.00097 | IQGAP3 | - | FALSE | | |
| chr1 | 54493197 | T | C | 0.00489 | TMEM59 | - | TRUE | AluSz6 | SINE,Alu |
| chr4 | 165996838 | T | C | 0.00480 | | . | FALSE | AluSg4 | SINE,Alu |
| chr17 | 74560725 | T | C | 0.00476 | SNHG16 | + | FALSE | THE1B | SINE,Alu |
| chr1 | 45244411 | C | A | 0.00149 | RPS8 | + | FALSE | | |
| chr1 | 86817074 | G | T | 9.65311E-06 | ODF2L | - | FALSE | L1PA7 | SINE,Alu |
| chr1 | 205577901 | G | A | 0.00904 | ELK4 | - | FALSE | | |
| chr1 | 201845880 | T | A | 0.00491 | IPO9 | + | FALSE | | |
| chr1 | 144598755 | G | A | 0.00044 | NBPF20 | + | FALSE | | |
| chr1 | 16133978 | T | C | 0.00515 | UQCRHL | - | FALSE | | |
| chr1 | 67874859 | T | C | 0.00214 | SERBP1 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 204520455 | T | C | 0.00478 | MDM4 | + | FALSE | AluJb | SINE,Alu |
| chr11 | 35017260 | T | C | 0.00224 | PDHX | + | FALSE | | |
| chr1 | 1325721 | C | T | 0.00471 | CCNL2 | - | FALSE | | |
| chr1 | 89518120 | A | G | 0.00453 | GBP1 | - | FALSE | | |
| chr9 | 100847551 | G | T | 0.00543 | TRIM14 | - | FALSE | MIR | SINE,Alu |
| chr1 | 51822219 | G | A | 0.00223 | EPS15 | - | FALSE | | |
| chr13 | 114748384 | C | T | 0.00050 | RASA3 | - | FALSE | | |
| chr1 | 1573181 | C | A | 0.00038 | CDK11B | - | FALSE | | |
| chr1 | 24999468 | G | T | 0.00075 | SRRM1 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 114939633 | G | A | 0.00188 | TRIM33 | - | FALSE | | |
| chr2 | 128064423 | C | T | 0.00063 | MAP3K2 | - | FALSE | | |
| chr18 | 2763697 | C | T | 8.35636E-08 | SMCHD1 | + | FALSE | | |
| chr2 | 136541072 | T | C | 0.00496 | UBXN4 | + | FALSE | | |
| chr8 | 27661063 | T | A | 0.00138 | ESCO2 | + | FALSE | (AC)n | SINE,Alu |
| chr10 | 120801786 | G | C | 0.00752 | EIF3A | - | FALSE | | |
| chr1 | 148928344 | A | G | 0.00608 | LOC645166 | + | FALSE | TAR1 | SINE,Alu |
| chr3 | 12625747 | G | A | 0.00067 | RAF1 | - | FALSE | | |
| chr3 | 14526625 | T | G | 0.00414 | SLC6A6 | + | FALSE | | |
| chr12 | 98942824 | A | G | 2.17067E-06 | TMPO | + | TRUE | AluSc | SINE,Alu |
| chr4 | 2940462 | T | C | 6.45116E-07 | NOP14-AS1,NOP14 | +,- | FALSE | AluJo | SINE,Alu |
| chr6 | 42854739 | A | C | 0.00671 | RPL7L1 | + | FALSE | AluSc | SINE,Alu |
| chr12 | 96259951 | G | A | 0.00328 | SNRPF | + | FALSE | | |
| chr1 | 16933658 | G | A | 0.00699 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr3 | 56703746 | A | C | 0.00017 | FAM208A | - | FALSE | | |
| chr16 | 8902411 | A | G | 0.00357 | PMM2 | + | FALSE | | |
| chr1 | 87379494 | A | T | 0.00364 | SEP15 | - | FALSE | | |
| chr6 | 42855962 | A | G | 0.00045 | RPL7L1 | + | TRUE | AluSz | SINE,Alu |
| chr7 | 6501836 | A | C | 0.00081 | KDELR2 | - | FALSE | | |
| chr1 | 19984107 | G | A | 0.00963 | MINOS1-NBL1,NBL1 | + | FALSE | | |
| chr9 | 132268259 | A | G | 0.00032 | LINC00963 | + | TRUE | AluJb | SINE,Alu |
| chr4 | 7765042 | C | T | 0.00903 | AFAP1,AFAP1-AS1 | +,- | FALSE | | |
| chr2 | 112252628 | G | T | 7.26456E-05 | MIR4435-2HG | - | FALSE | | |
| chr1 | 144902696 | A | T | 0.00997 | NBPF20,PDE4DIP | +,- | FALSE | | |
| chr2 | 203922075 | A | G | 0.00058 | NBEAL1 | + | FALSE | | |
| chr5 | 79277950 | C | A | 0.00037 | MTX3 | - | FALSE | (AC)n | SINE,Alu |
| chr17 | 40723650 | A | T | 0.00250 | MLX | + | FALSE | | |
| chr1 | 10521200 | T | C | 0.00096 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr1 | 10520439 | T | C | 0.00293 | | . | FALSE | AluSx1 | SINE,Alu |
| chr1 | 16889820 | C | T | 0.00012 | NBPF1 | - | FALSE | | |
| chr10 | 75009720 | T | C | 0.00016 | DNAJC9-AS1,MRPS16 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 154321623 | G | A | 0.00782 | ATP8B2 | + | FALSE | | |
| chr1 | 9161231 | T | C | 0.00481 | | . | FALSE | AluSx | SINE,Alu |
| chr5 | 37290413 | T | C | 0.00467 | | . | FALSE | AluSz | SINE,Alu |
| chr20 | 43996145 | T | A | 0.00611 | SYS1-DBNDD2,SYS1 | + | FALSE | | |
| chr1 | 33087433 | C | T | 0.00687 | ZBTB8OS | - | FALSE | | |
| chr15 | 85184830 | T | C | 0.00895 | WDR73,SCAND2P | +,- | FALSE | AluSz | SINE,Alu |
| chr4 | 3076659 | A | C | 0.00401 | HTT | + | FALSE | (CAG)n | SINE,Alu |
| chr1 | 36068278 | T | C | 0.00068 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr5 | 118174855 | T | C | 1.06010E-07 | DTWD2 | - | TRUE | AluY | SINE,Alu |
| chr1 | 44818529 | T | C | 0.00310 | ERI3 | - | FALSE | | |
| chr10 | 117823566 | G | T | 0.00433 | GFRA1 | - | FALSE | (ATC)n | SINE,Alu |
| chr7 | 80373463 | A | C | 0.00399 | SEMA3C | - | FALSE | | |
| chr3 | 172117459 | C | A | 0.00791 | FNDC3B | + | FALSE | | |
| chr1 | 16958833 | T | A | 0.00765 | | . | FALSE | | |
| chr15 | 89803950 | C | T | 0.00698 | FANCI | + | FALSE | | |
| chr10 | 47221452 | T | C | 0.00869 | | . | FALSE | AluJb | SINE,Alu |
| chr2 | 11781593 | G | T | 0.00551 | GREB1 | + | FALSE | | |
| chr12 | 25360463 | A | T | 0.00118 | KRAS | - | FALSE | | |
| chr1 | 36068237 | T | C | 0.00054 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr16 | 2821028 | G | T | 9.74054E-05 | SRRM2 | + | FALSE | | |
| chr4 | 57796758 | T | A | 6.82460E-05 | REST | + | FALSE | | |
| chr1 | 28835847 | A | G | 4.14471E-06 | SNHG3,RCC1 | + | TRUE | AluSx4 | SINE,Alu |
| chr6 | 2833055 | G | A | 0.00015 | SERPINB1 | - | FALSE | AluSx | SINE,Alu |
| chr2 | 178406764 | C | T | 0.00416 | AGPS | + | FALSE | | |
| chr17 | 65335445 | T | C | 0.00084 | PSMD12 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 159946783 | A | G | 0.00097 | LINC01133 | + | FALSE | (GAAA)n | SINE,Alu |
| chr1 | 17394048 | T | A | 0.00055 | PADI2 | - | FALSE | | |
| chr2 | 206983255 | T | C | 0.00246 | | . | FALSE | AluJb | SINE,Alu |
| chr5 | 70248478 | G | A | 0.00229 | SMN1,SMN2 | + | FALSE | L1MC5a | SINE,Alu |
| chr16 | 1411034 | A | G | 0.00322 | GNPTG | + | TRUE | AluSz | SINE,Alu |
| chr12 | 51324122 | A | G | 0.00226 | METTL7A | + | TRUE | AluSq2 | SINE,Alu |
| chr1 | 160967899 | T | C | 0.00661 | F11R | - | TRUE | AluSp | SINE,Alu |
| chr2 | 191745653 | T | G | 0.00030 | GLS | + | FALSE | | |
| chr1 | 6282224 | T | C | 0.00785 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr1 | 32661600 | C | T | 0.00235 | TXLNA | + | FALSE | (T)n | SINE,Alu |
| chr5 | 74063154 | C | G | 0.00255 | GFM2,NSA2 | +,- | FALSE | | |
| chr2 | 26613949 | A | G | 0.00669 | EPT1 | + | FALSE | | |
| chr1 | 10518688 | T | C | 0.00341 | | . | FALSE | AluSx1 | SINE,Alu |
| chr9 | 108152702 | G | A | 2.83018E-05 | SLC44A1 | + | FALSE | | |
| chr3 | 169807548 | T | C | 0.00665 | PHC3 | - | TRUE | AluSx1 | SINE,Alu |
| chr1 | 36067752 | T | C | 5.48772E-07 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 186641127 | A | T | 0.00546 | PTGS2 | - | FALSE | | |
| chr1 | 6282224 | T | C | 0.00062 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr1 | 120539691 | G | T | 0.00350 | NOTCH2 | - | FALSE | | |
| chr1 | 214524531 | T | C | 0.00753 | PTPN14 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 40213628 | A | G | 0.00058 | PPIE | + | TRUE | FRAM | SINE,Alu |
| chr5 | 79923361 | T | C | 0.00050 | DHFR | - | TRUE | AluJr | SINE,Alu |
| chr1 | 36789546 | A | G | 0.00623 | EVA1B | - | FALSE | MIRb | SINE,Alu |
| chr1 | 32799435 | A | T | 0.00515 | MARCKSL1 | - | FALSE | | |
| chr1 | 19543465 | T | C | 0.00709 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr1 | 184661942 | T | G | 0.00343 | EDEM3 | - | FALSE | | |
| chr1 | 85785556 | A | C | 0.00034 | DDAH1 | - | FALSE | | |
| chr1 | 109818158 | C | T | 0.00212 | CELSR2 | + | FALSE | | |
| chr15 | 38645589 | A | C | 0.00445 | SPRED1 | + | FALSE | | |
| chr3 | 45722253 | A | G | 0.00670 | LIMD1,LIMD1-AS1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 114940209 | G | T | 0.00177 | TRIM33 | - | FALSE | (T)n | SINE,Alu |
| chr1 | 197070776 | C | T | 0.00600 | ASPM | - | FALSE | | |
| chr1 | 25775374 | C | T | 0.00710 | TMEM57 | + | FALSE | | |
| chr1 | 47905553 | G | A | 0.00098 | FOXD2 | + | FALSE | | |
| chr9 | 132268440 | A | G | 3.40625E-05 | LINC00963 | + | TRUE | AluJb | SINE,Alu |
| chr14 | 67852067 | A | G | 2.77652E-05 | EIF2S1 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 6682037 | G | A | 0.00302 | PHF13 | + | FALSE | | |
| chr12 | 993930 | C | T | 0.00163 | WNK1 | + | FALSE | | |