RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	37331116	T	C	0.00481		.	FALSE	AluSx1	SINE,Alu
chr1	9160989	T	C	0.00609		.	FALSE	AluJb	SINE,Alu
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	218617066	A	T	0.00036	TGFB2-OT1,TGFB2	+	FALSE
chr1	162497738	G	C	0.00390	UHMK1	+	FALSE
chr1	168220364	A	G	6.18665E-05		.	FALSE	AluSz6	SINE,Alu
chr1	46032974	T	C	0.00196	AKR1A1	+	FALSE
chr3	44791406	T	C	0.00598	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr14	75202312	A	G	3.27721E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	65879488	A	C	0.00560	DNAJC6	+	FALSE
chr5	180682611	C	A	9.20591E-05	CTC-338M12.4	+	FALSE
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr2	101635538	C	T	0.00069	TBC1D8,RPL31	+,-	FALSE	Charlie17	SINE,Alu
chr1	320211	A	G	6.69717E-05		.	FALSE	AluJo	SINE,Alu
chr1	43917637	G	A	0.00164	SZT2,HYI	+,-	FALSE
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr15	63616883	A	T	0.00036	CA12	-	FALSE
chr19	23926877	A	T	0.00896	ZNF681	-	FALSE
chr7	16899197	C	T	0.00926	AGR3	-	FALSE
chr14	74526976	T	C	0.00469	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	15988702	T	C	0.00362		.	FALSE
chr4	248840	A	G	0.00655	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr1	179045672	G	A	0.00411	FAM20B	+	FALSE
chr4	42088291	C	A	0.00000	SLC30A9	+	FALSE
chr7	6442892	C	A	0.00675	RAC1	+	FALSE
chr6	42856959	A	G	6.63353E-07	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	128602366	T	C	0.00236		.	FALSE	AluSq2	SINE,Alu
chr4	47593283	G	C	0.00110	ATP10D	+	FALSE
chr1	100549715	T	A	0.00765	SASS6	-	FALSE
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr1	44463185	T	G	0.00969	SLC6A9	-	FALSE
chr1	110207639	T	A	0.00080	GSTM4	+	FALSE
chr1	36067925	T	C	0.00397	PSMB2	-	TRUE	AluSz	SINE,Alu
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chrX	123046779	A	G	0.00629	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	10517950	G	C	0.00449		.	FALSE
chr1	10521254	T	C	2.63330E-05	DFFA	-	TRUE	AluY	SINE,Alu
chr1	46093161	C	T	0.00628	GPBP1L1	-	FALSE
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr1	245008386	G	C	0.00041		.	FALSE	MER2	SINE,Alu
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr1	6354955	G	A	0.00282	ACOT7	-	FALSE
chr6	74134781	T	C	0.00789		.	FALSE	AluSz	SINE,Alu
chr1	205583612	C	A	0.00311	ELK4	-	FALSE
chr17	42877584	T	C	0.00489	GJC1	-	TRUE	AluSg	SINE,Alu
chr11	124954212	C	A	0.00827	SLC37A2	+	FALSE
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr1	28825830	A	G	0.00549	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	53359187	A	G	0.00813	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr3	49452957	A	T	0.00066	TCTA	+	FALSE	AluSg	SINE,Alu
chr4	165996838	T	C	0.00480		.	FALSE	AluSg4	SINE,Alu
chr15	42550445	T	C	0.00360	TMEM87A	-	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr1	10520383	T	C	0.00401		.	FALSE	AluSx1	SINE,Alu
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr4	761932	G	A	0.00827	PCGF3	+	FALSE
chr12	53807911	A	T	0.00355	SP1	+	FALSE
chr1	230416414	T	G	0.00360	GALNT2	+	FALSE
chr1	10520099	T	C	5.82547E-06		.	FALSE	AluSx	SINE,Alu
chr1	53289892	A	G	0.00070	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	109240643	A	C	0.00608	PRPF38B	+	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr1	16269737	C	T	0.00816	ZBTB17	-	FALSE
chr1	36923643	G	C	0.00409	MRPS15	-	FALSE
chr1	52520892	A	C	0.00292	TXNDC12	-	FALSE
chr9	131570178	T	C	0.00767	TBC1D13	+	FALSE
chr1	150937960	G	C	0.00014	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr1	145324364	C	G	0.00343	NBPF20,NBPF10	+	FALSE
chr1	16891340	T	A	0.00724	NBPF1	-	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr1	120839681	C	A	0.00077	FAM72B	+	FALSE
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr1	10519946	T	C	0.00080		.	FALSE	AluJr	SINE,Alu
chr1	149576483	G	A	0.00323	LINC00623,LINC00869,LOC103091866	+	FALSE
chr5	175816759	T	A	0.00018		.	FALSE
chr1	26582091	G	A	0.00172	CEP85	+	FALSE
chr17	49041692	T	C	2.35976E-05	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr12	98942679	A	G	2.08991E-07	TMPO	+	FALSE	AluSc	SINE,Alu
chr2	198339541	C	T	0.00465	COQ10B	+	FALSE	(T)n	SINE,Alu
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	1231173	C	T	1.33148E-07	ACAP3	-	FALSE
chr1	143915747	G	A	0.00603		.	FALSE
chr1	109780743	C	A	0.00643	SARS	+	FALSE
chr17	76799795	G	A	0.00363	USP36	-	FALSE
chr1	28661692	A	G	2.56757E-06	MED18	+	TRUE	AluSg	SINE,Alu
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr1	120695197	G	A	2.17750E-05		.	FALSE
chr9	131872860	C	T	0.00141	CRAT	-	FALSE
chr8	11701297	T	C	0.00288	CTSB	-	TRUE	AluSx1	SINE,Alu
chr3	10320968	T	A	0.00237	TATDN2	+	FALSE
chr1	110173775	G	T	0.00015	AMPD2	+	FALSE
chr14	19686757	A	G	0.00565	DUXAP10	+	FALSE
chr8	30536152	T	C	0.00015	GSR	-	TRUE	AluJr	SINE,Alu
chr1	12164538	G	A	8.95385E-07	TNFRSF8	+	FALSE
chr1	151288172	G	A	0.00312	PI4KB	-	FALSE
chr2	227662565	A	C	0.00028	IRS1	-	FALSE
chr10	75008731	T	C	8.90942E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr2	10711446	T	C	0.00014	NOL10	-	FALSE	MSTA	SINE,Alu
chr1	6582470	T	C	0.00522	NOL9	-	TRUE	AluSx1	SINE,Alu
chr17	65334885	T	C	2.77388E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	100019496	A	G	0.00789	REV1	-	FALSE
chr17	34942575	G	A	0.00374	GGNBP2	+	FALSE	A-rich	SINE,Alu
chr2	37330435	T	C	0.00401		.	FALSE	AluSq2	SINE,Alu
chr3	195243007	A	C	3.91570E-06	PPP1R2	-	FALSE
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr1	16112795	A	G	4.56234E-06	FBLIM1	+	FALSE
chr1	247319706	A	T	2.37466E-05	ZNF124	-	FALSE
chr2	20401859	A	T	0.00023	SDC1	-	FALSE	(A)n	SINE,Alu
chr1	46076462	A	G	0.00730	NASP	+	TRUE	AluSx	SINE,Alu
chr1	144922583	G	A	0.00101	NBPF20,PDE4DIP	+,-	FALSE
chr1	6948204	T	C	4.22429E-07	CAMTA1	+	FALSE	L2a	SINE,Alu
chr1	179326908	A	G	6.25947E-07	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	1594977	T	C	0.00749	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr4	247533	A	G	0.00972	ZNF876P	+	FALSE
chr1	16927419	G	A	0.00493	NBPF1	-	FALSE
chr1	26143727	A	T	0.00917	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	23833607	A	T	0.00890	E2F2	-	FALSE
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr1	10437811	A	G	0.00800	KIF1B	+	TRUE	AluSg	SINE,Alu
chr1	113212974	A	T	0.00424	CAPZA1	+	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr20	45839076	A	T	0.00178	ZMYND8	-	FALSE	(T)n	SINE,Alu
chr1	36067677	T	C	0.00462	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	25161424	T	C	0.00669	CYCS	-	TRUE	AluSz6	SINE,Alu
chr2	109401283	C	T	0.00039	RANBP2	+	FALSE
chr1	6283305	T	C	0.00554	ICMT	-	TRUE	AluSx3	SINE,Alu
chr19	11256702	T	C	6.98885E-06	SPC24	-	TRUE	AluJr4	SINE,Alu
chr3	195701388	G	A	0.00274	SDHAP1	-	FALSE
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr5	77655392	T	C	0.00080	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	148561089	T	C	0.00010	NBPF15	+	FALSE
chr6	42857111	A	G	0.00021	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr11	8708789	A	G	0.00237	RPL27A	+	TRUE	AluSp	SINE,Alu
chr1	9428685	T	G	0.00416	SPSB1	+	FALSE
chr1	31732677	G	A	0.00030	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr7	100279138	A	T	0.00741	GIGYF1	-	FALSE	A-rich	SINE,Alu
chr1	149913727	T	C	0.00721	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr1	16891340	T	A	0.00440	NBPF1	-	FALSE
chr1	246829742	T	C	0.00037	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr1	242251696	C	T	0.00335	PLD5	-	FALSE
chr1	28826130	A	G	0.00207	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr13	31033317	C	T	0.00254	HMGB1	-	FALSE
chr1	247319707	C	T	3.10675E-05	ZNF124	-	FALSE
chr3	37094679	G	A	7.98870E-06	LRRFIP2	-	FALSE
chr12	133298053	A	G	7.95391E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	990773	C	T	0.00486	AGRN	+	FALSE
chr10	75009921	T	C	0.00639	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr3	181430144	C	T	0.00043	SOX2-OT,SOX2	+	FALSE
chr1	146033815	G	A	0.00307	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr7	295960	T	A	2.17882E-07	FAM20C	+	FALSE
chr1	28824041	T	A	0.00872	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr1	36068369	T	C	5.31121E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	10520117	T	C	0.00999		.	FALSE	AluSx	SINE,Alu
chr4	128958127	A	G	0.00556	ABHD18	+	TRUE	AluSx3	SINE,Alu
chr1	45975331	A	G	0.00081	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr15	66641732	G	C	0.00106	TIPIN	-	FALSE
chr1	121133392	T	C	0.00651	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr1	144606838	A	G	0.00988	NBPF20	+	FALSE
chr12	64842920	A	G	2.84792E-05		.	FALSE	AluSz	SINE,Alu
chr19	10431799	G	T	0.00145	RAVER1	-	FALSE
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr12	109886822	A	C	0.00406	KCTD10	-	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr16	22296860	A	G	0.00041	EEF2K	+	TRUE	AluJo	SINE,Alu
chr2	74442548	C	T	0.00721		.	FALSE
chr1	95660026	G	T	0.00129	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr4	165998654	T	C	0.00953	TMEM192	-	TRUE	AluSg	SINE,Alu
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr1	53708528	T	C	0.00057	LRP8	-	FALSE	(TA)n	SINE,Alu
chr2	198416735	T	G	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr3	81698130	T	C	2.93981E-08	GBE1	-	FALSE
chr1	37949224	C	T	7.78396E-10	ZC3H12A	+	FALSE
chr1	246829616	T	C	0.00029	CNST	+	FALSE
chr1	988503	A	T	8.91206E-06	AGRN	+	FALSE
chr3	160283126	A	C	0.00564	KPNA4	-	FALSE
chr3	42266349	C	T	0.00942	TRAK1	+	FALSE
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chr14	50053315	G	A	0.00150		.	FALSE	7SLRNA	SINE,Alu
chr1	47844500	T	G	0.00596	CMPK1	+	FALSE
chr1	59147926	T	C	0.00601	MYSM1	-	FALSE
chr1	148003749	T	C	0.00114	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	6283430	T	C	0.00751	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	36067760	T	C	0.00203	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	3193040	G	A	0.00650	TSSC1	-	FALSE
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr1	149581854	C	A	0.00175	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr2	37329261	T	C	0.00123		.	FALSE	AluJr4	SINE,Alu
chr7	123390143	G	A	0.00910		.	FALSE
chr1	158067060	T	A	0.00778	KIRREL	+	FALSE
chr1	160967816	T	C	0.00025	F11R	-	TRUE	AluSp	SINE,Alu
chr4	39551167	T	C	0.00031	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr15	83659311	C	T	0.00858	FAM103A1,C15orf40	+,-	FALSE
chr8	11700231	T	C	1.53992E-05	CTSB	-	TRUE	AluSq2	SINE,Alu
chr1	9162348	T	C	0.00824		.	FALSE	AluSx	SINE,Alu
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr1	36067817	T	C	0.00016	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	224302047	C	T	3.20569E-05	FBXO28	+	FALSE
chr1	16946266	G	C	0.00750	CROCCP2	-	FALSE	MIRb	SINE,Alu
chr1	118502757	G	A	0.00793	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	16641899	C	T	0.00213	FBXO42	-	FALSE
chr5	122359500	A	C	0.00358	PPIC	-	FALSE	(AC)n	SINE,Alu
chr7	131188652	G	C	0.00684	PODXL	-	FALSE	MIR3	SINE,Alu
chr19	9672346	T	C	0.00222		.	FALSE	AluJr	SINE,Alu
chr1	28825337	A	G	0.00313	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	16889503	T	C	0.00130	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr17	57281125	A	G	0.00204	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	145689537	A	G	0.00028	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	9160900	T	C	0.00256		.	FALSE	AluJb	SINE,Alu
chr1	20826781	C	T	9.86003E-06	MUL1	-	FALSE
chr3	115528809	T	G	0.00087	LSAMP	-	FALSE
chr1	10519936	T	C	0.00072		.	FALSE	AluJr	SINE,Alu
chr1	53708530	T	C	9.40494E-05	LRP8	-	FALSE	(TA)n	SINE,Alu
chr3	57551513	A	G	0.00037	PDE12	+	TRUE	AluSc	SINE,Alu
chr14	53109823	T	C	2.25911E-06	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	179042719	A	G	2.68049E-06	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	10517635	T	C	0.00523		.	FALSE	AluSx1	SINE,Alu
chr1	10520331	C	T	0.00060		.	FALSE	AluSx1	SINE,Alu
chr4	155457049	T	A	0.00370	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	79115905	T	C	0.00113	IFI44	+	FALSE
chr16	2821989	C	T	0.00709	TCEB2	-	FALSE
chr4	153898736	A	G	0.00574	FHDC1	+	FALSE	AluJb	SINE,Alu
chr4	7764131	A	T	5.82585E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr16	5134599	G	C	0.00355	ALG1,EEF2KMT	+,-	FALSE
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr1	145375869	G	A	0.00480	NBPF20,NBPF10	+	FALSE
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr16	11929653	C	T	0.00333	RSL1D1	-	FALSE	LTR14B	SINE,Alu
chr2	25013062	T	C	0.00327		.	FALSE
chr3	71005566	C	T	0.00209	FOXP1	-	FALSE	(T)n	SINE,Alu
chr2	10923581	C	T	0.00593	ATP6V1C2,PDIA6	+,-	FALSE
chr1	10519912	T	C	5.10285E-06		.	FALSE	AluJr	SINE,Alu
chr1	214529170	T	C	0.00120	PTPN14	-	TRUE
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr4	170643772	C	T	0.00926	CLCN3	+	FALSE
chr19	57802824	G	A	0.00924	ZNF460	+	FALSE
chr4	10443060	T	G	0.00167	ZNF518B	-	FALSE
chr8	37351214	T	C	0.00109	LINC01605	-	FALSE
chr1	6283260	T	C	0.00071	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr2	217366919	A	G	0.00197		.	FALSE	AluSz6	SINE,Alu
chr3	10193475	A	G	0.00295	VHL	+	TRUE	AluJr	SINE,Alu
chr2	191829133	G	A	0.00097	GLS	+	FALSE
chr1	10517526	T	C	0.00364		.	FALSE	AluSx1	SINE,Alu
chr2	55516938	A	T	0.00265	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	32508534	A	G	0.00666	KHDRBS1	+	FALSE
chr1	145323656	A	T	0.00593	NBPF20,NBPF10	+	FALSE
chr1	100488177	C	T	0.00080	SLC35A3	+	FALSE
chr10	64911911	A	G	0.00908	NRBF2	+	FALSE
chr3	58292297	T	C	0.00950	RPP14	+	FALSE
chr1	66838733	A	C	0.00086	PDE4B	+	FALSE
chr1	53291425	A	G	2.55913E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	10518733	T	C	0.00541		.	FALSE	AluSx1	SINE,Alu
chr11	110128567	A	T	0.00634	RDX	-	FALSE
chr13	110407598	A	G	0.00222	IRS2	-	FALSE
chr17	65334767	T	C	3.33546E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr11	8707395	C	A	9.51875E-07	RPL27A	+	FALSE
chr1	52817434	T	C	0.00219	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	36068276	T	C	2.73596E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	97144750	T	C	0.00262		.	FALSE
chr1	144614842	C	G	0.00015	NBPF20	+	FALSE
chr1	184761162	T	C	0.00685	FAM129A	-	TRUE	AluJo	SINE,Alu
chr2	24225006	A	G	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	120611964	G	C	0.00211	NOTCH2	-	FALSE
chr17	65334868	T	C	0.00096	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	150704633	T	C	0.00080	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr1	10520145	T	C	0.00590		.	FALSE	AluSx	SINE,Alu
chr2	206981832	T	C	0.00251		.	FALSE	AluJb	SINE,Alu
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr1	179042512	A	G	4.06106E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	19586532	A	G	0.00188	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr1	118166877	C	T	0.00980	FAM46C	+	FALSE
chrX	54587218	A	G	0.00014	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr4	73923043	T	C	0.00236	COX18	-	TRUE	AluSz	SINE,Alu
chr1	186321189	A	G	0.00010	TPR	-	FALSE
chr1	79356400	C	T	0.00714	ADGRL4	-	FALSE
chr4	128758152	A	G	0.00198		.	FALSE	AluSx	SINE,Alu
chr2	37429626	A	G	0.00385	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr5	109190940	T	C	0.00173	MAN2A1	+	FALSE
chr1	10521172	T	C	1.01590E-06	DFFA	-	TRUE	AluY	SINE,Alu
chr1	179044309	A	G	0.00558	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	19585493	A	G	3.52757E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	36068276	T	C	0.00225	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	52860422	G	C	0.00024		.	FALSE	7SK	SINE,Alu
chr1	16890500	G	A	0.00030	NBPF1	-	FALSE
chr1	154554951	A	G	0.00554	ADAR	-	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr1	17287301	A	G	0.00104	CROCC	+	FALSE
chr10	23408278	C	T	0.00042	MSRB2	+	FALSE
chr1	145369709	A	G	0.00019	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr12	125514120	A	G	0.00232		.	FALSE	(TA)n	SINE,Alu
chr17	73940167	T	C	0.00035	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	145512151	C	A	0.00723	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr15	33064791	G	A	0.00203	FMN1	-	FALSE
chr1	988503	A	T	0.00141	AGRN	+	FALSE
chr1	19543797	T	C	0.00754	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr2	202028727	A	G	0.00833	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr1	67874696	T	C	9.42249E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	160231113	C	T	0.00204	DCAF8	-	FALSE
chr1	47184539	C	T	0.00425	EFCAB14	-	FALSE
chr2	68402796	C	T	0.00656	PNO1	+	FALSE
chr3	141879765	T	C	0.00212	GK5	-	TRUE	AluJr	SINE,Alu
chr1	24128467	C	T	0.00086	HMGCL	-	FALSE
chr2	232196570	A	G	0.00765	ARMC9	+	FALSE
chr11	126147713	C	G	0.00384	FOXRED1	+	FALSE
chr2	55516937	G	T	0.00250	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr4	17803673	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr17	40176809	A	T	0.00860	NKIRAS2	+	FALSE	AluSz	SINE,Alu
chr3	53268235	A	C	0.00452	TKT	-	FALSE
chr6	29910581	C	A	6.62336E-05		.	FALSE
chr1	53711218	A	T	0.00838	LRP8	-	FALSE
chr5	159492107	A	T	0.00332	TTC1	+	FALSE
chr3	179042832	A	G	0.00308	ZNF639	+	TRUE	AluSp	SINE,Alu
chr2	20401856	T	G	0.00263	SDC1	-	FALSE
chr1	62627128	A	G	0.00111	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	144932220	G	T	0.00449	NBPF20,PDE4DIP	+,-	FALSE
chr4	7765043	G	A	0.00071	AFAP1,AFAP1-AS1	+,-	FALSE
chr22	36677546	T	G	0.00197	MYH9	-	FALSE
chr1	46500251	G	A	0.00205	MAST2	+	FALSE
chr1	145293498	G	C	0.00154	NBPF20,NBPF10	+	FALSE
chr1	6282324	T	C	0.00186	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	53291420	A	G	0.00795	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	201845882	G	A	0.00890	IPO9	+	FALSE
chr6	150046601	T	C	0.00073	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	567191	C	T	0.00428		.	FALSE
chr1	61922437	G	T	0.00359	NFIA	+	FALSE
chr16	10625437	T	C	0.00028	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	225683180	G	T	0.00076	ENAH	-	FALSE
chr1	1251844	T	C	0.00731	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr1	109535116	G	A	0.00013	WDR47	-	FALSE
chr1	33148740	A	G	0.00210	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	67874697	T	C	5.54610E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	206983115	T	C	0.00992		.	FALSE	AluJb	SINE,Alu
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr12	133298255	A	G	0.00016	PGAM5	+	TRUE	AluSp	SINE,Alu
chr2	91805928	T	C	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr1	19545142	A	G	0.00071	LOC101927895,EMC1	+,-	FALSE
chr2	9629305	A	T	0.00591	ADAM17	-	FALSE
chr1	206516261	C	T	0.00228	SRGAP2	+	FALSE
chr2	131104524	G	A	0.00912	IMP4	+	FALSE	L1MA9	SINE,Alu
chr1	109465168	T	A	0.00246	GPSM2	+	FALSE
chr2	32539582	A	G	0.00419		.	FALSE	AluSp	SINE,Alu
chr12	98943192	A	G	0.00011	TMPO	+	FALSE	AluSz	SINE,Alu
chr3	107765249	T	C	0.00156	CD47	-	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr12	133298938	A	G	0.00034	PGAM5	+	TRUE	AluSg	SINE,Alu
chr6	26095454	A	G	0.00284	HFE	+	TRUE	AluY	SINE,Alu
chr1	46075719	A	G	0.00461	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	16932144	A	C	1.90883E-05	NBPF1	-	FALSE
chr1	19542631	T	C	0.00741	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr3	141164940	C	A	0.00194	ZBTB38	+	FALSE
chr5	125961166	A	G	0.00732	PHAX	+	TRUE	AluSz	SINE,Alu
chr11	6411935	T	C	0.00905	SMPD1	+	FALSE	(CTGGCG)n	SINE,Alu
chr1	3730400	T	C	0.00800	CEP104	-	TRUE	AluSx3	SINE,Alu
chr3	156259299	T	C	0.00097	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	120163831	A	G	0.00706	ZNF697	-	FALSE
chr1	9165685	G	A	7.66901E-05	GPR157	-	FALSE
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr1	36067838	T	C	1.55029E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	154557171	G	A	0.00329	ADAR	-	FALSE	A-rich	SINE,Alu
chr3	188603007	C	G	0.00785	LPP	+	FALSE
chr2	32534897	A	G	0.00680		.	FALSE	AluSx1	SINE,Alu
chr1	144852167	G	T	0.00352	NBPF20,PDE4DIP	+,-	FALSE
chr1	10502831	A	G	0.00193	APITD1,APITD1-CORT	+	FALSE
chr1	9162247	T	C	0.00549		.	FALSE	AluSx	SINE,Alu
chr6	29857113	C	A	0.00582		.	FALSE
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	16893841	C	T	0.00272	NBPF1	-	FALSE
chr2	61705068	A	T	0.00103		.	FALSE
chr17	57279257	A	G	0.00362	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	205687344	C	T	0.00633	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr17	57279281	A	G	0.00918	PRR11	+	TRUE	AluSq2	SINE,Alu
chr3	101576175	T	C	0.00246	NFKBIZ	+	FALSE
chr5	37290504	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr1	33148635	A	G	5.17667E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	16112795	A	G	0.00145	FBLIM1	+	FALSE
chr2	24227417	A	G	0.00831		.	FALSE	AluSc	SINE,Alu
chr4	17629434	A	G	0.00661		.	FALSE	AluSx3	SINE,Alu
chr1	1255412	C	A	0.00751	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr1	116235186	A	G	0.00054	VANGL1	+	FALSE
chr16	10624953	T	C	0.00056	EMP2	-	TRUE	AluSx3	SINE,Alu
chr6	42855057	A	G	0.00034	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	27992825	G	A	0.00012	IFI6	-	FALSE
chr5	180682608	C	A	0.00144	CTC-338M12.4	+	FALSE
chr5	9549459	A	G	0.00783	SNHG18	+	FALSE
chr3	25777072	C	T	4.38639E-06	NGLY1	-	FALSE	L1MEg	SINE,Alu
chr5	81571875	A	T	0.00027	RPS23	-	FALSE
chr14	19685015	C	G	0.00069	DUXAP10	+	FALSE
chr1	179852074	T	C	0.00309	TOR1AIP1	+	FALSE
chr2	27887286	G	A	0.00404	SLC4A1AP	+	FALSE
chr1	6282401	T	C	0.00469	ICMT	-	TRUE	AluSz	SINE,Alu
chr18	33831189	C	A	0.00763	MOCOS	+	FALSE
chr5	17276080	A	C	0.00298	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	10521260	T	C	0.00658	DFFA	-	TRUE	AluY	SINE,Alu
chr1	161930908	G	A	0.00083	ATF6	+	FALSE
chr11	93466866	G	T	0.00559	MIR1304	-	FALSE	AluJr	SINE,Alu
chr3	57199227	A	C	0.00638	IL17RD	-	FALSE
chr1	53712570	A	C	0.00277	LRP8	-	FALSE	(CA)n	SINE,Alu
chr1	180169330	C	T	0.00374	FLJ23867	+	FALSE	MIR	SINE,Alu
chr12	64842974	C	A	0.00925		.	FALSE	AluSz	SINE,Alu
chr7	65619292	A	G	0.00189	CRCP	+	TRUE	AluSz6	SINE,Alu
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr1	155144757	T	C	0.00758	KRTCAP2	-	FALSE	Tigger19b	SINE,Alu
chr1	145512024	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr19	45406537	T	C	0.00278	TOMM40	+	FALSE
chr1	179829401	T	C	0.00118	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr6	150047420	T	C	2.23465E-06	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr4	165998694	T	C	0.00041	TMEM192	-	TRUE	AluSg	SINE,Alu
chr11	65764473	C	G	0.00403	EIF1AD	-	FALSE	AluSz6	SINE,Alu
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	148023637	C	T	0.00014	NBPF8	-	FALSE
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr1	10519888	T	C	0.00666		.	FALSE	AluJr	SINE,Alu
chr1	37948912	C	T	0.00084	ZC3H12A	+	FALSE
chr17	65334726	T	C	7.47982E-07	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr21	9908316	C	T	0.00719	TEKT4P2	-	FALSE
chr1	183218868	T	G	0.00091	NMNAT2	-	FALSE
chr1	21810903	A	G	0.00498	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr5	125962175	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	1668943	A	C	0.00640	SLC35E2	-	FALSE
chr1	19543465	T	C	0.00427	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	73460310	G	C	0.00091	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr2	36776057	A	G	0.00034	CRIM1	+	FALSE
chr8	30536146	T	C	1.15312E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr1	10042987	A	G	0.00261	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	36032276	A	T	0.00012	NCDN	+	FALSE	(CA)n	SINE,Alu

RBP	IGF2BP2
Knock-Method	shRNA
RBP Family	KH_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR478FJK
Platform	HiSeq
Pubmed ID	32252787

IGF2BP2 - Target Gene Network