RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	99812978	A	G	0.00475	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	68685888	G	A	0.00280		.	FALSE
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr6	158093827	C	T	0.00201	ZDHHC14	+	FALSE
chr1	11783106	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	26608012	C	A	0.00564	SH3BGRL3	+	FALSE
chr1	144595935	G	A	0.00359	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	6283306	T	C	0.00275	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	1647871	T	C	0.00906	CDK11B,CDK11A	-	FALSE
chr8	41798912	T	C	0.00892	KAT6A	-	FALSE
chr1	100388748	T	C	0.00445	AGL	+	FALSE
chr7	129474438	C	T	0.00034	UBE2H	-	FALSE
chr1	144881463	C	T	0.00147	NBPF20,PDE4DIP	+,-	FALSE
chr1	209605640	A	C	0.00581	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	23408939	T	A	1.04314E-06	KDM1A	+	FALSE
chr1	163309219	A	T	0.00023	NUF2	+	FALSE
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr10	45499895	G	A	0.00255	ZNF22	+	FALSE
chr1	201846616	C	G	0.00209	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	226573364	A	G	0.00128	PARP1	-	FALSE
chr1	26449341	A	G	0.00622	PDIK1L	+	FALSE
chr1	144594232	C	T	2.29859E-05	NBPF20	+	FALSE
chr2	32235359	A	C	0.00664	MEMO1	-	FALSE
chr3	22424405	T	A	0.00766		.	FALSE
chr1	120539691	G	T	0.00350	NOTCH2	-	FALSE
chr4	6689813	C	A	0.00141		.	FALSE	L2b	SINE,Alu
chr9	28607	T	C	0.00146	WASH1	-	FALSE
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr2	85775237	T	C	6.42894E-05	GGCX	-	TRUE	AluSx4	SINE,Alu
chr1	16889864	C	A	0.00094	NBPF1	-	FALSE
chr1	203277253	A	G	0.00624	BTG2	+	FALSE
chr1	320211	A	G	6.69717E-05		.	FALSE	AluJo	SINE,Alu
chr3	51738256	A	G	0.00312	TEX264	+	FALSE
chr12	133297934	A	G	9.03426E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr14	53243411	T	C	0.00028	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr5	98109389	T	C	0.00234	RGMB	+	FALSE
chr2	24494638	T	G	0.00495	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr1	92865902	A	G	0.00040		.	FALSE	AluJr	SINE,Alu
chr1	153643449	G	C	0.00704	ILF2	-	FALSE
chr1	28661657	A	G	0.00011	MED18	+	TRUE	AluSg	SINE,Alu
chr2	238005476	C	T	0.00456	COPS8	+	FALSE
chr1	10520702	T	C	0.00883	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	13942884	A	C	0.00016	PDPN	+	FALSE
chr1	85785548	C	T	0.00353	DDAH1	-	FALSE
chr4	39551179	T	C	0.00142	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	178406765	T	A	0.00325	AGPS	+	FALSE
chr4	83406544	C	T	0.00328	TMEM150C	-	FALSE
chr1	9643873	A	G	0.00064		.	FALSE	AluY	SINE,Alu
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	93307477	A	G	6.92611E-06	FAM69A,RPL5	+,-	FALSE
chrX	3526615	G	T	0.00820	PRKX	-	FALSE
chr1	46075663	A	G	0.00240	NASP	+	TRUE	AluSx4	SINE,Alu
chr3	149459341	A	G	0.00042	COMMD2	-	FALSE
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr2	10050947	T	C	0.00273	TAF1B	+	FALSE
chrX	151140335	G	C	0.00136	GABRE	-	FALSE	(GT)n	SINE,Alu
chr1	114938247	G	A	0.00197	TRIM33	-	FALSE
chr1	46075663	A	G	0.00068	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	40539202	G	A	0.00966	PPT1	-	FALSE
chr5	122165480	C	T	0.00221	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	15993699	C	A	0.00011		.	FALSE	AluSx4	SINE,Alu
chr1	28904397	C	G	0.00125	TRNAU1AP	+	FALSE
chr1	148556726	G	T	0.00023		.	FALSE
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr1	173863209	G	A	0.00156		.	FALSE
chr2	206983797	T	C	0.00145		.	FALSE	AluSx	SINE,Alu
chr8	146016990	C	T	0.00027	RPL8	-	FALSE
chr2	85548076	A	T	0.00682	TGOLN2	-	FALSE
chr10	104417856	T	A	0.00616	TRIM8	+	FALSE	(AAT)n	SINE,Alu
chr2	24223291	A	G	0.00512	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr2	85548074	T	C	0.00724	TGOLN2	-	FALSE
chr1	11089835	A	G	0.00065	MASP2	-	FALSE	AluSp	SINE,Alu
chr4	2940430	T	C	2.47251E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	1534205	G	A	1.69659E-11	FNDC10	-	FALSE
chr8	144357975	C	T	0.00444	GLI4	+	FALSE
chr15	65442112	T	C	0.00529	CLPX	-	TRUE	AluSg	SINE,Alu
chr1	205737659	C	T	0.00024	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	1718810	G	A	5.85228E-05	GNB1	-	FALSE
chr3	108367794	G	T	0.00434	DZIP3	+	FALSE
chr3	194999352	A	T	0.00482	ACAP2	-	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr1	10521238	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chrX	2825075	T	C	0.00410	ARSD	-	TRUE	AluSx1	SINE,Alu
chr15	91044382	A	G	0.00453	IQGAP1	+	FALSE
chr1	160966434	T	C	4.88498E-15	F11R	-	TRUE	AluSg	SINE,Alu
chr8	30536450	T	C	8.74573E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr1	120163520	T	C	0.00017	ZNF697	-	FALSE
chrM	10307	A	C	0.00588		.	FALSE
chr6	52442880	G	T	5.05556E-08	TRAM2-AS1	+	FALSE
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr1	144932197	T	A	0.00430	NBPF20,PDE4DIP	+,-	FALSE
chr17	37006249	T	C	0.00774		.	FALSE	AluSx	SINE,Alu
chr5	70503889	C	A	0.00131		.	FALSE
chr1	46751319	G	A	0.00085	LRRC41	-	FALSE
chr12	6840209	G	A	0.00820	COPS7A	+	FALSE
chr1	47716042	A	T	0.00574	STIL	-	FALSE
chr7	107788257	C	T	0.00068	NRCAM	-	FALSE
chr2	206986233	T	C	0.00491		.	FALSE	AluSz	SINE,Alu
chr1	62628606	A	G	0.00027	PATJ	+	TRUE	AluSg4	SINE,Alu
chr15	41590943	A	G	0.00561	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	214557685	C	A	0.00205	PTPN14	-	FALSE
chr1	20977907	A	G	3.34679E-05	PINK1,PINK1-AS	+,-	FALSE
chr2	183601110	T	G	0.00824	DNAJC10	+	FALSE
chr2	101622883	T	A	0.00440	RPL31	+	FALSE
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr1	6259433	G	A	0.00522	RPL22	-	FALSE	G-rich	SINE,Alu
chr1	32833540	T	C	0.00381	BSDC1	-	TRUE
chr1	109475629	A	G	0.00310	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	36068295	T	C	0.00058	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	11347154	A	T	0.00441	UBIAD1	+	FALSE
chr6	13788215	T	C	0.00546	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	9163328	T	C	0.00287		.	FALSE	AluSp	SINE,Alu
chr6	31110789	T	C	0.00798		.	FALSE
chr1	171558516	C	T	4.87297E-05	PRRC2C	+	FALSE
chr1	9162348	T	C	0.00824		.	FALSE	AluSx	SINE,Alu
chr1	148251875	T	C	0.00436	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	28825415	A	G	1.13446E-06	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr6	26413368	T	G	0.01000	BTN3A1	+	FALSE
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr1	179829595	T	C	0.00188	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	24022437	A	G	0.00342	RPL11	+	FALSE
chr1	19542463	T	C	0.00746	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	26143726	G	T	0.00560	SEPN1	+	FALSE	AluSx	SINE,Alu
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr1	1650801	T	C	0.00359	CDK11B,CDK11A	-	FALSE
chr1	175129946	C	T	0.00466	KIAA0040	-	FALSE	(TCT)n	SINE,Alu
chr1	169101269	T	G	0.00207	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr4	160279820	C	T	0.00354	RAPGEF2	+	FALSE
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr6	8014786	T	C	0.00086	BLOC1S5-TXNDC5,BLOC1S5,EEF1E1-BLOC1S5	-	TRUE	AluSz	SINE,Alu
chr1	16891365	G	A	0.00475	NBPF1	-	FALSE
chr1	101442570	A	T	0.00377	SLC30A7	+	FALSE
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr6	160101733	T	C	0.00784	SOD2	-	TRUE	AluSz	SINE,Alu
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr1	20977748	T	G	0.00474	PINK1,PINK1-AS	+,-	FALSE
chr5	74063154	C	G	0.00255	GFM2,NSA2	+,-	FALSE
chr1	28422194	A	C	0.00018		.	FALSE
chr5	141690819	G	A	0.00062	SPRY4	-	FALSE
chr4	128995640	G	A	0.00567	LARP1B	+	FALSE
chr1	155161737	G	C	0.00482	MUC1	-	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr10	60047612	A	G	0.00015	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr2	132481470	C	T	0.00594	C2orf27A	+	FALSE
chr1	33148210	A	G	0.00342	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr12	124146569	A	G	0.00013	GTF2H3	+	TRUE	AluSq2	SINE,Alu
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr2	39009355	A	G	0.00079		.	FALSE	AluSx3	SINE,Alu
chr1	37948912	C	T	0.00084	ZC3H12A	+	FALSE
chr1	155058663	G	A	0.00300	EFNA3	+	FALSE
chr2	37328012	T	C	6.47624E-05		.	FALSE
chr1	990806	G	A	0.00432	AGRN	+	FALSE
chr5	109202858	G	A	0.00054	MAN2A1	+	FALSE	(A)n	SINE,Alu
chr3	156258308	T	C	9.02162E-07	SSR3	-	TRUE	AluYk3	SINE,Alu
chr3	72426059	T	A	0.00417	RYBP	-	FALSE
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	176176230	G	A	0.00091	RFWD2	-	FALSE
chr1	117532372	G	T	0.00678	PTGFRN	+	FALSE
chr3	141668758	T	C	2.84489E-05	TFDP2	-	TRUE	AluSz	SINE,Alu
chr16	87443734	C	T	0.00074	ZCCHC14	-	FALSE
chr1	10519932	T	C	0.00710		.	FALSE	AluJr	SINE,Alu
chr2	198416726	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	22852880	G	C	0.00247	ZBTB40	+	FALSE
chr1	160967755	C	T	0.00563	F11R	-	FALSE	(T)n	SINE,Alu
chr6	42856330	A	G	2.22045E-16	RPL7L1	+	TRUE
chr19	42376843	A	G	0.00221		.	FALSE	AluSp	SINE,Alu
chr6	74134823	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr5	177576461	A	T	0.00659		.	FALSE
chr16	81064494	A	G	8.13539E-06	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	19542463	T	C	0.00447	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chrX	54587254	A	G	0.00019	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr3	179506721	G	C	0.00018	USP13	+	FALSE
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr16	10625320	T	C	0.00923	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	19543249	T	C	0.00559	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr14	75202288	C	T	0.00706	FCF1	+	FALSE	AluSc	SINE,Alu
chr14	69704553	G	T	7.62587E-05	EXD2	+	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr2	20818517	T	C	0.00748	HS1BP3	-	FALSE
chr6	13788297	T	C	0.00979	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr12	25360465	G	A	0.00074	KRAS	-	FALSE
chr1	38411445	G	A	0.00625	INPP5B	-	FALSE
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr7	128143797	A	G	4.50405E-06		.	FALSE	AluSq2	SINE,Alu
chr1	145694181	A	G	0.00052	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr2	26613948	A	G	0.00218	EPT1	+	FALSE
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	154440548	G	T	0.00123	IL6R	+	FALSE	(TTGTT)n	SINE,Alu
chr1	33219771	G	C	0.00256	KIAA1522	+	FALSE
chr11	76733946	A	G	0.00725	ACER3	+	FALSE	A-rich	SINE,Alu
chr2	208619315	A	G	0.00091	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr1	179042482	A	G	0.00301	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr1	19543247	T	C	5.35430E-06	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	36752811	C	T	2.19602E-12	THRAP3	+	FALSE
chr1	230415244	T	C	0.00360	GALNT2	+	FALSE
chr4	2940371	T	C	0.00905	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr19	12742509	A	G	0.00717		.	FALSE	AluSx	SINE,Alu
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	6283558	A	T	0.00624	ICMT	-	FALSE
chr1	16907328	G	T	0.00973	NBPF1	-	FALSE
chr10	47221452	T	C	0.00869		.	FALSE	AluJb	SINE,Alu
chr1	1252662	T	C	0.00136	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr2	217001882	T	C	0.00996	XRCC5	+	FALSE
chr16	10624953	T	C	0.00056	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	114443474	A	G	9.14620E-06	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr6	42856978	A	G	0.00061	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	109474776	A	G	0.00149	GPSM2,CLCC1	+,-	FALSE	AluSz	SINE,Alu
chr1	32508534	A	G	0.00666	KHDRBS1	+	FALSE
chr1	55207988	G	A	0.00914	MROH7-TTC4,TTC4	+	FALSE
chr1	1017747	A	G	0.00142	C1orf159	-	FALSE
chr1	203821865	C	T	0.00222	ZC3H11A	+	FALSE
chr4	5830393	C	T	0.00220	CRMP1	-	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr4	57326917	A	G	5.41162E-06	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	10520331	C	T	2.36721E-05		.	FALSE	AluSx1	SINE,Alu
chr1	235715523	A	G	0.00660	GNG4	-	FALSE
chr2	27001973	C	T	0.00327	SLC35F6	+	FALSE	AluSx	SINE,Alu
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr2	39210398	A	T	0.00180	SOS1	-	FALSE
chr1	143398850	G	T	0.00639		.	FALSE
chr1	101443701	A	G	0.00406	SLC30A7	+	FALSE
chr1	28826085	A	G	0.00281	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	10520684	T	C	0.00125	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	10517635	T	C	0.00124		.	FALSE	AluSx1	SINE,Alu
chr1	150548883	A	C	0.00255	MCL1	-	FALSE
chr2	233199107	C	T	0.00675	DIS3L2	+	FALSE
chr1	44443175	A	C	0.00026	ATP6V0B	+	FALSE
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr2	37330435	T	C	0.00401		.	FALSE	AluSq2	SINE,Alu
chr2	10270757	A	T	0.00382	RRM2	+	FALSE
chr2	121749583	T	C	0.00120	GLI2	+	FALSE
chrX	77083982	T	C	0.00086	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	11814631	A	G	5.11326E-05		.	FALSE
chr3	88199298	T	C	0.00048	C3orf38	+	FALSE
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr11	63724398	T	C	0.00664	NAA40	+	FALSE	AluSx	SINE,Alu
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	19543352	T	C	0.00279	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr3	189712010	G	A	1.42873E-07	P3H2	-	FALSE
chr14	19686757	A	G	0.00565	DUXAP10	+	FALSE
chr2	37328075	T	C	0.00335		.	FALSE
chr1	183515428	G	A	0.00232	SMG7	+	FALSE
chr5	174956487	T	C	0.00457	SFXN1	+	FALSE
chr1	207943325	A	G	0.00158	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	67874696	T	C	9.42249E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	79923292	C	G	0.00305	DHFR	-	FALSE	AluJr	SINE,Alu
chr1	145369498	A	G	0.00700	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chrX	118673382	T	C	0.00021	CXorf56	-	TRUE	AluSz	SINE,Alu
chr5	151041884	T	A	0.00101	SPARC	-	FALSE
chr1	16892274	A	T	0.00371	NBPF1	-	FALSE
chr19	13054924	A	C	0.00982	CALR	+	FALSE
chr2	167168093	C	T	0.00789	SCN9A	-	FALSE
chr1	89271574	T	C	0.00074	PKN2	+	FALSE
chr1	15899345	T	C	0.00300	AGMAT	-	TRUE	AluSx3	SINE,Alu
chr10	28971536	A	T	0.00815	BAMBI	+	FALSE
chr1	100490275	A	G	0.00748	SLC35A3	+	TRUE	AluSc5	SINE,Alu
chr1	145513090	A	G	0.00017	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	28825337	A	G	0.00313	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	214524178	T	C	0.00265	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	224573601	C	T	0.00587	WDR26	-	FALSE
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr1	202992954	T	C	0.00042	TMEM183A	+	FALSE
chr2	11321778	G	T	0.00402	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr3	33458266	T	C	0.00035	UBP1	-	FALSE
chr1	16910172	G	A	0.00958	NBPF1	-	FALSE
chr2	187544223	T	G	0.00254	ITGAV	+	FALSE
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	29519712	T	C	0.00017	MECR	-	TRUE	AluJb	SINE,Alu
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr17	38438362	G	A	0.00016	WIPF2	+	FALSE	A-rich	SINE,Alu
chr2	109401259	C	T	0.00889	RANBP2	+	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr2	91805833	A	G	1.63980E-13		.	FALSE	MLT1H1	SINE,Alu
chr1	65692499	C	T	0.00235	AK4	+	FALSE	(T)n	SINE,Alu
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr1	169101257	A	T	0.00144	ATP1B1	+	FALSE
chr9	132575836	A	C	0.00546	TOR1A	-	FALSE
chr1	931935	T	C	0.00796		.	FALSE
chr1	158067060	T	A	0.00778	KIRREL	+	FALSE
chr2	37331555	T	C	0.00132		.	FALSE	AluJb	SINE,Alu
chr3	197400501	C	G	0.00011	RUBCN	-	FALSE
chr3	122291688	A	G	0.00597	DTX3L	+	FALSE	AluSz	SINE,Alu
chr1	97144546	A	C	0.00803		.	FALSE
chr1	46075720	A	G	0.00105	NASP	+	TRUE	AluSx4	SINE,Alu
chr3	172117458	A	C	0.00011	FNDC3B	+	FALSE
chr1	9162362	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr14	69254646	T	C	0.00181	ZFP36L1	-	FALSE
chr17	65335291	T	C	0.00113	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	144874815	T	C	0.00701	NBPF20,PDE4DIP	+,-	FALSE
chr1	33147928	A	G	9.58446E-05	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	20977913	T	G	0.00201	PINK1,PINK1-AS	+,-	FALSE
chr14	67852040	A	G	4.57409E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr1	6659505	G	A	0.00017	KLHL21	-	FALSE
chr19	1981317	T	A	0.00539	CSNK1G2	+	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr9	33466219	A	C	0.00148	NOL6	-	FALSE
chr2	1652354	G	A	0.00000	PXDN	-	FALSE
chr17	73885274	T	C	0.00143	TRIM65	-	TRUE	AluSg	SINE,Alu
chr7	193091	C	T	1.15297E-06	FAM20C	+	FALSE
chr3	156258227	T	C	0.00094	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	32508478	C	T	0.00509	KHDRBS1	+	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr6	29910583	C	T	4.95604E-05		.	FALSE
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr5	149823799	A	T	0.00672	RPS14	-	FALSE
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	113234338	A	C	0.00051	MOV10	+	FALSE
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr3	195243007	A	C	3.91570E-06	PPP1R2	-	FALSE
chr1	44071221	G	A	0.00105	PTPRF	+	FALSE
chr2	87821033	C	A	0.00474		.	FALSE
chr1	220232144	T	C	1.06602E-07	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	11298093	C	T	7.93954E-12	MTOR	-	FALSE
chr6	31378510	G	A	0.00104		.	FALSE
chr1	27202789	T	C	0.00026		.	FALSE	AluSq2	SINE,Alu
chr1	225683184	G	T	0.00741	ENAH	-	FALSE
chr1	9328120	A	G	0.00386	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	225683180	G	T	0.00076	ENAH	-	FALSE
chr1	85278156	C	T	0.00663		.	FALSE	AluSz6	SINE,Alu
chr1	26144435	C	G	4.88757E-05	SEPN1	+	FALSE
chr1	322711	A	G	0.00149		.	FALSE
chr1	200589813	C	A	1.20032E-05	KIF14	-	FALSE
chr1	3545198	T	C	3.01160E-05	TPRG1L	+	FALSE
chr1	9331255	A	G	0.00992	H6PD	+	TRUE	AluSx	SINE,Alu
chr15	49283066	T	G	0.00065	SECISBP2L	-	FALSE
chr1	145369709	A	G	0.00073	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr3	71005566	C	T	0.00209	FOXP1	-	FALSE	(T)n	SINE,Alu
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr2	61764916	A	C	0.00189	XPO1	-	FALSE	(AC)n	SINE,Alu
chr1	114449662	T	C	0.00223	DCLRE1B	+	FALSE
chr1	24286327	G	A	0.00053	PNRC2	+	FALSE
chr1	10520174	T	C	0.00413		.	FALSE	AluSx	SINE,Alu
chr1	161488421	G	T	0.00588	FCGR2A	+	FALSE	AluSz6	SINE,Alu
chr2	191069434	G	A	0.00680	HIBCH	-	FALSE
chr2	223807817	A	C	0.00991	ACSL3	+	FALSE	(A)n	SINE,Alu
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr5	118175329	T	C	2.47285E-05	DTWD2	-	TRUE	AluJr	SINE,Alu
chr3	156258389	T	C	0.00179	SSR3	-	TRUE	AluYk3	SINE,Alu
chr9	32425898	T	C	0.00177	ACO1	+	FALSE
chr15	91044387	T	G	0.00077	IQGAP1	+	FALSE
chr1	67875106	C	A	0.00403	SERBP1	-	FALSE	(AC)n	SINE,Alu
chr1	16958833	T	A	0.00765		.	FALSE
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr6	52860743	T	G	1.89710E-05		.	FALSE	7SK	SINE,Alu
chr1	19586520	A	G	0.00305	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	36447346	G	A	0.00419	ANLN	+	FALSE
chr5	118174733	T	C	0.00037	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	54231849	C	T	0.00812	NDC1	-	FALSE
chr1	180247476	T	C	0.00890		.	FALSE
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	191799592	A	G	0.00021	GLS	+	TRUE
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr2	200792307	G	A	0.00596	C2orf69	+	FALSE
chr1	16889217	G	C	0.00696	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr2	109401283	C	T	0.00039	RANBP2	+	FALSE

RBP	FASTKD1
Knock-Method	shRNA
RBP Family	RAP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR728BOL
Platform	HiSeq
Pubmed ID	32252787

FASTKD1 - Target Gene Network