RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	176728458	G	T	0.00901	RAB24	-	FALSE
chr9	138798859	C	A	0.00291	CAMSAP1	-	FALSE
chr2	224621887	T	C	0.00373	AP1S3	-	FALSE	AluSc	SINE,Alu
chr11	75116734	C	A	0.00453	RPS3	+	FALSE
chr5	140594467	G	A	0.00045	PCDHB13	+	FALSE
chr12	133298069	A	G	6.69127E-09	PGAM5	+	TRUE	AluJo	SINE,Alu
chr6	90344222	T	C	0.00451	LYRM2	-	TRUE	AluJo	SINE,Alu
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr7	7283569	G	A	0.00032	C1GALT1	+	FALSE	(AT)n	SINE,Alu
chr5	10655842	C	T	0.00024	ANKRD33B	+	FALSE
chr2	85776644	T	C	0.00127	GGCX	-	TRUE	AluSz6	SINE,Alu
chr5	175816760	T	A	0.00016		.	FALSE
chr1	114306374	G	A	0.00017	RSBN1	-	FALSE
chr1	115275398	T	G	0.00474	CSDE1	-	FALSE
chr1	85278665	A	G	0.00242		.	FALSE
chr6	44222157	G	A	0.00856	SLC35B2	-	FALSE
chr1	9161366	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr3	47628810	T	A	0.00934	SMARCC1	-	FALSE
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chr2	143638992	T	A	0.00089	KYNU	+	FALSE
chr12	133298417	A	G	0.00084	PGAM5	+	TRUE	AluSp	SINE,Alu
chr18	11852628	C	T	0.00048	GNAL,CHMP1B	+	FALSE
chr4	83406545	A	G	0.00156	TMEM150C	-	FALSE
chr5	176887511	A	C	0.00662	DBN1	-	FALSE
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr19	30192475	G	A	0.00575	C19orf12	-	FALSE	MER2	SINE,Alu
chr1	22854931	C	A	0.00238	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr1	1594315	C	T	0.00347	CDK11B,SLC35E2B	-	FALSE
chr2	20818286	A	C	0.00714	HS1BP3	-	FALSE
chr4	1228741	G	A	0.00095	CTBP1	-	FALSE
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr1	173793106	C	T	0.00772	CENPL	-	FALSE
chr6	107113955	A	G	0.00265	QRSL1	+	TRUE	AluSg	SINE,Alu
chr1	28835937	A	G	2.00244E-07	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	16889413	T	C	0.00016	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr3	10005650	C	T	0.00698	EMC3	-	FALSE
chr2	36776054	C	T	0.00117	CRIM1	+	FALSE
chr2	69685864	A	C	0.00610	AAK1	-	FALSE	(CA)n	SINE,Alu
chr1	19542415	T	C	0.00204	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	40229368	A	G	0.00209	BMP8B,PPIE	+,-	FALSE
chr3	99517479	T	C	8.06312E-05	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr3	196079389	T	C	0.00509		.	FALSE	AluSx	SINE,Alu
chr1	46032974	T	C	0.00196	AKR1A1	+	FALSE
chr2	73480136	T	A	0.00281	CCT7	+	FALSE
chr5	17276055	T	C	0.00784	BASP1	+	FALSE	(TC)n	SINE,Alu
chr3	10192709	C	T	0.00082	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr19	36575645	G	A	0.00590	WDR62	+	FALSE
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr3	196466874	G	T	0.00226	PAK2	+	FALSE
chr1	46076543	A	G	0.00989	NASP	+	TRUE	AluSx	SINE,Alu
chr1	101541172	A	G	6.48917E-05	LOC102606465	+	TRUE	MLT1K	SINE,Alu
chr1	11979809	A	C	0.00836	KIAA2013	-	FALSE
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr9	130268408	T	C	6.51633E-05	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr2	99812289	A	G	0.00282	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	144874815	T	C	0.00701	NBPF20,PDE4DIP	+,-	FALSE
chr3	49395695	A	C	0.00159	GPX1	-	FALSE
chr1	16933583	T	C	0.00050	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr1	36068369	T	C	0.00252	PSMB2	-	TRUE	AluSc	SINE,Alu
chr15	33063527	C	T	0.00183	FMN1	-	FALSE	AluYk3	SINE,Alu
chr1	144932197	T	A	0.00430	NBPF20,PDE4DIP	+,-	FALSE
chr5	179720333	A	G	0.00308		.	FALSE
chr1	40537942	A	C	0.00955	CAP1	+	FALSE	(A)n	SINE,Alu
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	10521238	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr2	240954110	A	G	0.00605	NDUFA10	-	FALSE
chr1	19543356	T	C	0.00256	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr15	90819418	A	G	0.00516		.	FALSE	AluSx	SINE,Alu
chr4	154257510	A	C	0.00121	TRIM2	+	FALSE	(A)n	SINE,Alu
chr1	10520331	C	T	0.00816		.	FALSE	AluSx1	SINE,Alu
chr2	217366919	A	G	0.00709		.	FALSE	AluSz6	SINE,Alu
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr1	78142911	T	C	0.00925	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr14	50361171	C	T	0.00017	ARF6	+	FALSE	(T)n	SINE,Alu
chr3	10193511	A	G	0.00116	VHL	+	TRUE	AluJr	SINE,Alu
chr19	16661431	T	C	0.00017	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr3	129033736	T	C	0.00309	H1FX	-	FALSE
chr1	38174665	G	A	0.00339	CDCA8	+	FALSE
chr6	74493432	A	C	0.00611	CD109	+	FALSE
chr1	53289547	A	G	0.00646	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr3	75779619	T	A	0.00061	ZNF717	-	FALSE
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr1	148251083	T	C	0.00041	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr6	42857028	A	G	0.00064	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr3	195963400	T	G	0.00155		.	FALSE
chr1	120166681	G	A	0.00879	ZNF697	-	FALSE
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr2	128620437	T	A	0.00388	AMMECR1L	-	FALSE
chr2	48605828	T	A	0.00650	FOXN2	+	FALSE	(T)n	SINE,Alu
chr1	100549600	G	T	0.00181	SASS6	-	FALSE
chr3	48894565	T	A	0.00142	SLC25A20	-	FALSE
chr1	207247477	T	C	0.00078	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr15	39879717	G	A	0.00162	THBS1	+	FALSE
chr1	64125439	A	C	3.63698E-07	PGM1	+	FALSE
chr22	33257176	A	G	0.00930	SYN3,TIMP3	+,-	FALSE
chr1	16952481	A	G	5.15865E-05	CROCCP2	-	FALSE
chr1	990773	C	T	0.00705	AGRN	+	FALSE
chr1	45975673	A	G	0.00410	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr15	91044382	A	G	0.00453	IQGAP1	+	FALSE
chr2	151326173	A	C	0.00143	RND3	-	FALSE
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr2	171849612	T	C	0.00364	TLK1	-	FALSE
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr13	96506664	A	G	5.36176E-05	UGGT2	-	FALSE
chr11	8709240	A	G	0.00431	RPL27A	+	TRUE	AluYk2	SINE,Alu
chr1	168218504	T	C	0.00748		.	FALSE	AluSz	SINE,Alu
chr1	108113839	T	C	0.00027	VAV3	-	FALSE
chr2	232319524	T	A	0.00040	NCL	-	FALSE
chr1	39990456	G	A	0.00749	BMP8A,PPIEL	+,-	FALSE	L2b	SINE,Alu
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr1	200375418	C	T	0.00425	ZNF281	-	FALSE
chr2	24225554	A	G	0.00419		.	FALSE	AluSq2	SINE,Alu
chr9	130268408	T	C	0.00416	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr3	5257975	A	T	9.78592E-05	EDEM1	+	FALSE
chr13	47345467	G	T	0.00495	ESD	-	FALSE
chr7	17384437	A	G	0.00192	AHR	+	TRUE	AluSx	SINE,Alu
chr3	45636335	A	G	0.00262	LIMD1	+	FALSE	(AC)n	SINE,Alu
chr1	22400707	C	G	0.00158	CDC42	+	FALSE	AluSc8	SINE,Alu
chr1	28836975	A	G	0.00023	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr3	120128940	A	G	0.00434	FSTL1	-	FALSE
chr1	36392543	G	T	0.00971		.	FALSE	(T)n	SINE,Alu
chr1	93803522	T	C	0.00163	CCDC18-AS1	-	TRUE	AluJr	SINE,Alu
chr3	15115284	G	A	0.00305	RBSN	-	FALSE
chr1	16889414	T	C	0.00858	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr3	195962244	G	T	0.00083		.	FALSE
chr2	58316814	A	G	0.00257	VRK2	+	FALSE
chr1	27992799	T	A	0.00017	IFI6	-	FALSE	FAM	SINE,Alu
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr2	189459785	C	T	0.00262	GULP1	+	FALSE
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	26774225	A	G	0.00614	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr2	206986233	T	C	0.00491		.	FALSE	AluSz	SINE,Alu
chr1	245017464	T	A	0.00624	HNRNPU,SNORA100	-	FALSE
chr22	36677551	T	C	7.06365E-05	MYH9	-	FALSE
chr1	78483452	C	T	0.00094	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr16	70284570	A	C	0.00028	EXOSC6	-	FALSE	AluSx	SINE,Alu
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr5	122165501	A	T	0.00051	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr12	133635613	T	C	0.00024		.	FALSE
chr1	36770605	C	T	0.00041	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	16717888	G	A	0.00118	SZRD1	+	FALSE
chr3	12624070	C	T	2.78764E-07	MKRN2	+	FALSE
chr1	10519973	T	C	0.00586		.	FALSE	AluJr	SINE,Alu
chr1	100654813	T	C	0.00352	DBT	-	TRUE	AluSz	SINE,Alu
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr10	71993094	T	G	0.00078	PPA1	-	FALSE
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr1	14150032	C	T	0.00163	PRDM2	+	FALSE
chr3	15114486	T	C	3.99101E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	16909129	T	C	0.00131	NBPF1	-	FALSE
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	19542310	T	C	0.00582	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	205687354	T	C	0.00012	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	36522460	A	G	0.00407		.	FALSE	AluSc	SINE,Alu
chr1	66099013	C	A	7.87351E-06	LEPR	+	FALSE
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr2	11053740	C	T	0.00402	KCNF1	+	FALSE
chr2	37429737	A	G	3.16512E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu
chr10	1086801	G	C	0.00421	IDI2-AS1,IDI1	+,-	FALSE
chr1	16933749	A	G	0.00764	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	27182750	G	C	0.00141		.	FALSE
chr19	16663345	T	C	0.00304	SLC35E1	-	TRUE	AluSg	SINE,Alu
chr1	53712215	G	T	0.00458	LRP8	-	FALSE
chr1	117530213	G	T	0.00256	PTGFRN	+	FALSE
chr1	120162635	A	T	0.00203	ZNF697	-	FALSE
chr1	201350983	C	T	0.00768	LAD1	-	FALSE
chr11	65404870	C	T	0.00160	PCNX3	+	FALSE
chr12	27574427	A	G	7.32829E-06	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr3	195694448	C	T	0.00289	SDHAP1	-	FALSE
chr6	158613390	T	C	0.00416	GTF2H5	+	FALSE
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr2	242122440	C	A	0.00354	PPP1R7	+	FALSE
chr1	143399383	T	A	0.00053		.	FALSE	L1MC4	SINE,Alu
chr1	1650787	T	C	0.00071	CDK11B,CDK11A	-	FALSE
chr1	326539	A	G	0.00719		.	FALSE
chr1	145511998	A	G	0.00715	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	128602500	T	C	4.07621E-06		.	FALSE	AluSq2	SINE,Alu
chr2	55516908	A	G	0.00016	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	157963370	C	G	0.00445	KIRREL	+	FALSE
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr12	60173406	C	T	0.00708	SLC16A7	+	FALSE
chr1	150446056	G	A	0.00945	RPRD2	+	FALSE	(A)n	SINE,Alu
chr2	10923581	C	T	0.00593	ATP6V1C2,PDIA6	+,-	FALSE
chr2	86251114	T	C	0.00150		.	FALSE	AluSx	SINE,Alu
chr1	33086905	T	C	0.00598	ZBTB8OS	-	FALSE	AluY	SINE,Alu
chr1	16203171	C	T	3.13656E-06	SPEN	+	FALSE
chr1	86852621	A	G	0.00930	ODF2L	-	FALSE
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr9	17829	G	A	0.00142	WASH1	-	FALSE
chr17	65335394	T	C	5.10125E-06	PSMD12	-	TRUE	AluSx	SINE,Alu
chr16	75479331	T	C	0.00725	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	156107534	C	T	0.00168	LMNA	+	FALSE
chr1	47142538	G	A	7.23026E-06	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr19	11560483	A	G	0.00775	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr1	16913677	T	C	0.00638	NBPF1	-	FALSE
chr11	6703162	A	T	0.00726	MRPL17	-	FALSE
chr1	179326882	A	G	0.00020	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	160967899	T	C	0.00011	F11R	-	TRUE	AluSp	SINE,Alu
chr1	145688664	A	T	0.00298	NBPF20,NBPF10,RNF115	+	FALSE
chr5	130540368	A	C	0.00420	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr2	128063526	C	A	0.00759	MAP3K2	-	FALSE
chr1	180082703	C	A	2.04280E-05	CEP350	+	FALSE
chr1	19586437	A	G	0.00056	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	61277775	A	G	0.00113	PEX13	+	TRUE	AluY	SINE,Alu
chr2	33007710	C	T	0.00743	TTC27	+	FALSE
chr1	9162362	T	C	0.00526		.	FALSE	AluSx	SINE,Alu
chr3	10192744	A	G	3.36147E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	101623533	C	T	0.00784	RPL31	+	FALSE
chr1	12024235	C	T	0.00395	PLOD1	+	FALSE
chr1	184761365	A	G	0.00758	FAM129A	-	FALSE	AluJo	SINE,Alu
chr1	45244414	T	A	0.00750		.	FALSE
chr9	124094998	T	G	0.00299	GSN	+	FALSE	(TG)n	SINE,Alu
chr5	134061340	T	A	0.00493	SEC24A	+	FALSE
chr1	153917621	G	C	0.00020	DENND4B	-	FALSE
chr4	123859284	C	T	0.00034	SPATA5	+	FALSE
chr12	120899168	A	G	6.24570E-05	GATC	+	TRUE	AluJr	SINE,Alu
chr1	92976590	G	A	0.00629	EVI5	-	FALSE
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	45226084	G	A	0.00970	KIF2C	+	FALSE
chr1	9163334	T	C	0.00074		.	FALSE	AluSp	SINE,Alu
chr1	179326847	A	G	0.00846	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	67874697	T	C	4.44446E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr4	79447807	G	C	0.00339	FRAS1	+	FALSE
chr9	19376252	A	T	0.00367		.	FALSE
chr1	16933629	A	G	0.00299	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	10517512	T	C	0.00498		.	FALSE	AluSx1	SINE,Alu
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr1	570178	G	A	0.00787		.	FALSE
chr6	34213986	T	A	0.00262	HMGA1	+	FALSE
chr11	126147713	C	G	0.00384	FOXRED1	+	FALSE
chr1	46075604	A	G	0.00155	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	93617406	A	T	0.00275	TMED5	-	FALSE
chr19	29703961	A	C	0.00226	UQCRFS1	-	FALSE
chr15	65442506	T	C	0.00088	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	220231455	T	C	0.00274	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	33148706	A	G	0.00087	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	179117266	T	C	0.00111	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr1	36534736	A	G	0.00016		.	FALSE	AluJo	SINE,Alu
chr1	144828765	A	T	0.00976	NBPF20,NBPF9	+	FALSE
chr1	10517352	T	C	0.00064		.	FALSE	AluJr	SINE,Alu
chr1	21793735	C	G	0.00099	NBPF3	+	FALSE
chr1	85785549	T	C	0.00621	DDAH1	-	FALSE
chr5	53842079	C	T	0.00067	SNX18	+	FALSE
chr1	168215575	G	A	0.00688	ANKRD36BP1	-	FALSE
chr2	112252628	G	T	7.26456E-05	MIR4435-2HG	-	FALSE
chrX	3523050	C	A	0.00043	PRKX	-	FALSE
chr5	121362874	A	G	0.00022	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr1	89447854	G	T	0.00310	KYAT3,RBMXL1	-	FALSE
chr2	37328013	T	C	0.00010		.	FALSE
chr1	12677549	T	A	1.84464E-05	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	27202812	T	C	0.00356		.	FALSE	AluSq2	SINE,Alu
chr1	145688973	A	G	0.00283	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr2	174090630	C	A	0.00025	ZAK,MLK7-AS1	+,-	FALSE
chr1	78187733	G	A	0.00388	USP33	-	FALSE
chr1	186946912	G	A	0.00414	PLA2G4A	+	FALSE
chr1	53680205	C	T	9.80404E-07	C1orf123	-	FALSE
chr1	46075791	A	G	0.00120	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	47905554	C	G	0.00297	FOXD2	+	FALSE
chr5	125961623	A	G	6.78430E-09	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	33148210	A	G	0.00114	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	145586403	G	T	0.00075	NBPF20,NBPF10,PIAS3	+	FALSE
chr4	25236017	T	C	0.00291	PI4K2B	+	FALSE
chr2	37327670	T	C	0.00021		.	FALSE
chr3	62189314	C	T	0.00018	PTPRG	+	FALSE
chr5	70503889	C	A	0.00131		.	FALSE
chr2	74686329	C	T	0.00640	INO80B-WBP1,WBP1	+	FALSE
chr10	75009591	T	C	8.39163E-08	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr2	87777087	T	C	0.00737	LINC00152	+	FALSE
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr3	44790759	T	C	1.45198E-07	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	28835847	A	G	5.60567E-05	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	243289448	G	A	0.00036	CEP170	-	FALSE
chr2	239973454	T	C	0.00091	HDAC4	-	FALSE
chr2	37333930	T	C	0.00073	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr5	149763305	A	G	0.00640	TCOF1	+	FALSE
chr1	180854783	T	C	0.00292	XPR1	+	FALSE
chr9	125887703	A	C	0.00067	STRBP	-	FALSE
chr5	55235967	A	G	0.00639	IL6ST	-	FALSE	(AT)n	SINE,Alu
chr1	146250905	G	C	0.00444	NBPF20,NBPF10,NBPF25P	+	FALSE
chr16	81745173	C	A	0.00179	CMIP	+	FALSE
chr21	33032035	T	A	1.90109E-05	SOD1	+	FALSE
chr2	97020049	T	C	0.00070	NCAPH	+	FALSE
chr1	214557685	C	A	0.00205	PTPN14	-	FALSE
chr2	37327670	T	C	0.00297		.	FALSE
chr1	22854931	C	A	7.08508E-09	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr1	204526713	A	G	0.00078	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	36388197	C	T	0.00315	AGO1	+	FALSE
chr2	85546320	G	T	0.00749	TGOLN2	-	FALSE	AluSc	SINE,Alu
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr1	46075720	A	G	0.00105	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	1594977	T	C	0.00487	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	206982255	T	C	0.00431		.	FALSE	AluSg7	SINE,Alu

RBP	DDX28
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR205VSQ
Platform	HiSeq
Pubmed ID	32252787

DDX28 - Target Gene Network