Dataset Overview
RBP
AKAP1
Knock-Method
shRNA
RBP Family
TUDOR
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR016IDR
Platform
HiSeq
Pubmed ID
32252787
AKAP1 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of AKAP1
Show
10
25
50
100
entries
Search:
Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
40.38
6.45
-3.21762
1.72454E-200
1.23682E-198
A1CF
29.02
9.7
-1.91662
9.98083E-125
3.13781E-123
A2M
2827.98
862.14
-2.30217
6.04225E-199
4.24499E-197
A2M-AS1
0.26
0.92
1.23308
6.70375E-05
0.00011
AACS
17.52
12.47
-1.03938
9.35089E-39
7.09431E-38
AADAC
0.87
0.39
-1.67999
5.42784E-07
1.05151E-06
AADAT
2.45
7.42
0.94988
1.74370E-11
4.40970E-11
AAED1
4.64
8.78
0.28447
0.00932
0.01273
AAGAB
4.83
32.08
2.30461
1.45133E-126
4.66934E-125
AAR2
22.2
44.74
0.41567
1.65042E-07
3.31336E-07
Showing 1 to 10 of 10,945 entries
Previous
1
2
3
4
5
…
1095
Next
Function Analysis of Target Genes of AKAP1
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AASS
121722841_121722945_121721553_121721649_121726065_121726233
0.00533
-0.171
DataSet_01_381
View details
ABI1
27044583_27044670_27040526_27040712_27047990_27048167
0.00056
-0.167
DataSet_01_381
View details
ACSS2
33509765_33509906_33509610_33509669_33511125_33511234
0.00026
-0.062
DataSet_01_381
View details
AKAP1
55185066_55185196_55182801_55184539_55187385_55187519
0.00176
0.172
DataSet_01_381
View details
ALB
74272345_74272478_74270017_74270123_74275071_74275204
0.00026
0.24
DataSet_01_381
View details
ALB
74270837_74270890_74270003_74270123_74272345_74272478
0.00110
-0.035
DataSet_01_381
View details
ANAPC10
146018839_146018912_146017136_146017263_146019271_146019341
0.00505
-0.067
DataSet_01_381
View details
ANKLE2
133318394_133318477_133318004_133318071_133319739_133319862
0.00448
-0.079
DataSet_01_381
View details
ANKRD10
111555822_111555886_111545044_111545610_111558379_111558442
0.00493
-0.089
DataSet_01_381
View details
ARID4B
235377083_235377341_235359345_235359430_235383107_235383283
0.00077
-0.253
DataSet_01_381
View details
Showing 1 to 10 of 177 entries
Previous
1
2
3
4
5
…
18
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABI1
27044583_27044670_27047990_27048164_27040526_27040712
0.00847
0.131
DataSet_01_381
View details
AC005152.2
70070689_70072874_70078061_70078182_70067183_70067372
0.00150
0.125
DataSet_01_381
View details
AFMID
76198783_76198832_76202026_76202131_76187050_76187141
0.00563
0.114
DataSet_01_381
View details
AFMID
76200908_76200981_76202026_76202131_76187050_76187141
0.00717
0.041
DataSet_01_381
View details
AHSG
186336285_186336426_186337645_186337729_186334975_186335139
0.00601
-0.006
DataSet_01_381
View details
AK2
33480122_33480195_33487193_33487304_33478807_33479003
0.00000
0.34
DataSet_01_381
View details
ALB
74274310_74274457_74275071_74275204_74272345_74272478
0.00005
-0.295
DataSet_01_381
View details
AP2A2
977094_977224_981197_981299_972061_972255
0.00121
0.145
DataSet_01_381
View details
ARL1
101794839_101794951_101799621_101799759_101790191_101790355
0.00756
0.198
DataSet_01_381
View details
ARSE
2876314_2876476_2877643_2877929_2873456_2873578
0.00001
0.152
DataSet_01_381
View details
Showing 1 to 10 of 78 entries
Previous
1
2
3
4
5
…
8
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
APEX1
20923736_20923932_20923736_20923862_20924072_20924260
0.00953
-0.017
DataSet_01_381
View details
BTAF1
93718821_93719039_93718821_93718911_93719541_93719637
0.00686
-0.192
DataSet_01_381
View details
CKAP2
53030142_53030314_53030142_53030224_53030657_53030742
0.00924
-0.419
DataSet_01_381
View details
DRAM2
111663137_111663315_111663153_111663315_111662498_111662581
0.00459
0.106
DataSet_01_381
View details
HLA-DMA
32917047_32917176_32917050_32917176_32916389_32916645
0.00404
-0.568
DataSet_01_381
View details
HNRNPC
21699116_21699231_21699155_21699231_21698477_21698525
0.00004
-0.072
DataSet_01_381
View details
HNRNPH1
179043869_179044111_179044021_179044111_179043098_179043219
0.00956
0.049
DataSet_01_381
View details
MARS
57909702_57909941_57909702_57909774_57910027_57910120
0.00626
-0.036
DataSet_01_381
View details
PAEP
138457259_138457451_138457259_138457360_138457630_138457676
0.00000
-0.144
DataSet_01_381
View details
PHPT1
139744464_139745012_139744464_139744589_139745206_139745474
0.00898
-0.039
DataSet_01_381
View details
Showing 1 to 10 of 22 entries
Previous
1
2
3
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ANKRD42
82923694_82926242_82924020_82926242_82922336_82922472
0.00673
-0.125
DataSet_01_381
View details
APOA2
161192707_161193056_161192707_161192784_161193139_161193215
0.00024
0.018
DataSet_01_381
View details
APOA2
161192707_161192840_161192707_161192784_161193139_161193215
0.00067
0.007
DataSet_01_381
View details
ARHGEF40
21556114_21556257_21556126_21556257_21555159_21555264
0.00216
0.141
DataSet_01_381
View details
ATP6V1G2-DDX39B
31508258_31508343_31508258_31508311_31509726_31509925
0.00002
-0.196
DataSet_01_381
View details
AUP1
74754067_74754267_74754067_74754186_74754374_74754446
0.00176
-0.029
DataSet_01_381
View details
C2
31912954_31913449_31913238_31913449_31912561_31912630
0.00280
-0.708
DataSet_01_381
View details
C5orf42
37179462_37179545_37179462_37179542_37180118_37180285
0.00974
-0.067
DataSet_01_381
View details
CARS
3062125_3062261_3062125_3062214_3063394_3063486
0.00196
-0.143
DataSet_01_381
View details
DNAJC10
183604271_183605115_183605025_183605115_183600975_183601113
0.00961
-0.037
DataSet_01_381
View details
Showing 1 to 10 of 40 entries
Previous
1
2
3
4
Next
Show
10
25
50
100
entries
Search:
RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCF3
183905184_183905549_183905184_183905231_183905451_183905549
0.00397
-0.073
DataSet_01_381
View details
ACAA1
38167652_38168191_38167652_38167832_38168000_38168191
0.00113
-0.11
DataSet_01_381
View details
AKT1
105237081_105238789_105237081_105237184_105238701_105238789
0.00338
-0.029
DataSet_01_381
View details
APEX1
20923736_20924260_20923736_20923862_20924072_20924260
0.00050
-0.036
DataSet_01_381
View details
ARL6IP4
123465675_123466426_123465675_123465846_123466117_123466426
0.00965
-0.204
DataSet_01_381
View details
ARPC3
110873914_110874488_110873914_110874009_110874361_110874488
0.00178
-0.013
DataSet_01_381
View details
C1orf63
25570040_25571792_25570040_25570124_25571640_25571792
0.00165
0.258
DataSet_01_381
View details
CARS
3047905_3050314_3047905_3048027_3050225_3050314
0.00975
-0.057
DataSet_01_381
View details
CDC37
10505903_10506219_10505903_10506019_10506110_10506219
0.00007
-0.05
DataSet_01_381
View details
CIAO1
96934194_96935093_96934194_96934396_96935005_96935093
0.00000
-0.114
DataSet_01_381
View details
Showing 1 to 10 of 52 entries
Previous
1
2
3
4
5
6
Next
Differential Variants in RNA (DVRs)
Show
10
25
50
100
entries
Search:
Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
3730332
T
C
6.29937E-05
CEP104
-
TRUE
AluSx3
SINE,Alu
chr1
85278665
A
G
0.00242
.
FALSE
chr1
109476363
A
G
0.00172
GPSM2,CLCC1
+,-
FALSE
chr1
19542401
T
C
0.00071
LOC101927895,EMC1
+,-
FALSE
AluSz
SINE,Alu
chr1
145513051
A
G
0.00269
NBPF20,NBPF10,RBM8A,GNRHR2
+,-
FALSE
AluSz6
SINE,Alu
chr1
145689537
A
G
0.00028
NBPF20,NBPF10
+
TRUE
AluSg
SINE,Alu
chr1
16928622
C
A
0.00197
NBPF1
-
FALSE
chr1
94351065
A
T
0.00142
GCLM
-
FALSE
chr1
45976269
C
G
0.00039
MMACHC
+
FALSE
chr1
179055020
C
T
0.00738
TOR3A
+
FALSE
Showing 1 to 10 of 325 entries
Previous
1
2
3
4
5
…
33
Next
Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression