RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr19	42376872	A	G	0.00647		.	FALSE	AluSp	SINE,Alu
chr9	115447528	T	C	0.00112	INIP	-	TRUE	AluJb	SINE,Alu
chr1	16913612	G	A	0.00145	NBPF1	-	FALSE
chr1	109240642	A	C	0.00373	PRPF38B	+	FALSE
chr1	10519064	T	C	0.00012		.	FALSE	AluSx3	SINE,Alu
chr1	114940228	C	T	0.00559	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	17394775	G	A	0.00103	PADI2	-	FALSE
chr2	204301754	C	G	0.00012	RAPH1	-	FALSE
chr1	16921146	T	C	0.00353	NBPF1	-	FALSE
chr1	204524842	A	G	0.00044	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	9629953	C	A	0.00042	ADAM17	-	FALSE
chr22	29904354	G	A	0.00072	THOC5	-	FALSE
chr1	160062340	G	A	0.00967	IGSF8	-	FALSE
chr18	7012123	A	G	0.00065	LAMA1	-	FALSE
chr1	179326418	A	G	0.00626	SOAT1	+	TRUE	AluSg	SINE,Alu
chr4	2940091	T	C	0.00212	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	179326588	A	G	0.00563	SOAT1	+	TRUE	AluSg	SINE,Alu
chr2	74442548	C	T	0.00035		.	FALSE
chr3	195961254	C	T	0.00119		.	FALSE
chr4	128756632	A	G	0.00602		.	FALSE	AluSx	SINE,Alu
chr4	39550084	T	C	2.47241E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr1	91486839	T	C	0.00329	ZNF644	-	FALSE
chr1	6283260	T	C	0.00125	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	148003749	T	C	0.00517	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	90401416	T	C	6.95799E-05	LRRC8D	+	FALSE
chr21	34730077	A	G	0.00019	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	10518052	T	C	0.00791		.	FALSE	AluJr	SINE,Alu
chr6	111588769	A	G	2.24603E-05	MFSD4B	+	TRUE	AluYm1	SINE,Alu
chr1	9162362	T	C	0.00526		.	FALSE	AluSx	SINE,Alu
chr7	100072031	T	C	0.00238	TSC22D4	-	FALSE
chr2	198416726	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr1	144931392	G	A	0.00172	NBPF20,PDE4DIP	+,-	FALSE
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr4	186081819	C	T	3.85218E-06	CFAP97	-	FALSE
chr9	136897584	C	A	0.00060	BRD3	-	FALSE	A-rich	SINE,Alu
chr3	155660873	A	G	0.00018		.	FALSE	AluSz	SINE,Alu
chr17	78921108	G	A	0.00065	RPTOR	+	FALSE
chr14	31916783	T	C	3.40362E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	242012149	C	T	0.00510	EXO1	+	FALSE
chr3	17199207	T	A	0.00075	TBC1D5	-	FALSE	A-rich	SINE,Alu
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr1	16890130	A	C	0.00138	NBPF1	-	FALSE
chr1	161160459	T	C	0.00270	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr1	10519888	T	C	0.00666		.	FALSE	AluJr	SINE,Alu
chr3	47036756	C	G	0.00091	NBEAL2	+	FALSE
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	4291832	A	T	6.49020E-08	LYAR	-	FALSE
chr1	150337289	G	T	0.00298	RPRD2	+	FALSE
chr1	68940566	A	C	0.00126	DEPDC1	-	FALSE
chr3	45153708	G	A	4.36430E-08	CDCP1	-	FALSE
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chr1	9643106	A	G	0.00088		.	FALSE	AluSx	SINE,Alu
chr14	75202402	A	G	0.00141	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	150448374	T	A	0.00607	RPRD2	+	FALSE
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	145369480	A	G	7.08400E-07	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr2	38961523	C	A	0.00790	GALM	+	FALSE	AluSc8	SINE,Alu
chr5	43377390	T	C	0.00062	CCL28	-	TRUE	AluSz	SINE,Alu
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr1	4834606	T	C	0.00647	AJAP1	+	FALSE
chr1	53289688	A	G	5.35400E-06	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr14	88933002	C	G	0.00459	PTPN21	-	FALSE
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr1	43309548	G	A	0.00764	ERMAP	+	FALSE
chr7	100031498	T	C	0.00110	MEPCE	+	FALSE
chr5	95130802	A	T	0.00123	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr3	15296359	C	T	2.99463E-05	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr1	153587308	C	T	0.00077	S100A14	-	FALSE
chr5	40830050	T	C	0.00042		.	FALSE	AluSp	SINE,Alu
chr10	75009721	T	C	1.96034E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	16892275	C	T	0.00230	NBPF1	-	FALSE
chr8	27661063	T	A	0.00138	ESCO2	+	FALSE	(AC)n	SINE,Alu
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	145689601	A	G	0.00517	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	205687354	T	C	0.00012	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	10520702	T	C	0.00883	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	16301148	T	C	0.00050	DPH3	-	FALSE
chr1	145293515	A	G	4.09953E-06	NBPF20,NBPF10	+	FALSE
chr1	16933643	A	G	0.00279	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	121133770	A	G	2.59811E-05	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr14	51387782	C	T	0.00802	PYGL	-	FALSE
chr1	33148284	A	G	0.00793	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	151092839	A	G	0.00135	GABPB2	+	TRUE	AluSp	SINE,Alu
chr1	16891365	G	A	0.00609	NBPF1	-	FALSE
chr1	145513114	A	G	0.00033	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	196079390	T	C	2.00948E-06		.	FALSE	AluSx	SINE,Alu
chr1	33148287	A	G	0.00052	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	20826083	G	A	0.00289	MUL1	-	FALSE
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr1	26144435	C	G	0.00131	SEPN1	+	FALSE
chr17	7123232	C	G	0.00250	DLG4,ACADVL	+,-	FALSE
chr1	16717888	G	A	0.00979	SZRD1	+	FALSE
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr6	159395409	T	C	0.00136		.	FALSE
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr1	10519787	A	T	0.00037		.	FALSE	(A)n	SINE,Alu
chr1	220231484	T	C	0.00046	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	3753136	A	T	0.00088	CEP104	-	FALSE
chr3	149683508	A	G	0.00397	PFN2	-	FALSE
chr1	1419752	A	G	7.69134E-06	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	178406763	T	C	0.00452	AGPS	+	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr3	169808354	G	A	0.00015	PHC3	-	FALSE
chr2	37328042	T	C	6.80414E-06		.	FALSE
chr7	55433884	A	C	0.00271	LANCL2	+	FALSE
chr3	56763328	T	C	0.00546	ARHGEF3	-	FALSE
chr1	900721	T	C	0.00032	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr1	33148623	A	G	0.00221	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr12	125512173	A	G	0.00285		.	FALSE	AluSx1	SINE,Alu
chr2	24225460	A	G	0.00081		.	FALSE	AluSq2	SINE,Alu
chr1	16929100	C	T	0.00911	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr5	72801321	T	A	0.00280	BTF3	+	FALSE
chr1	16928622	C	A	0.00011	NBPF1	-	FALSE
chr5	140594470	G	A	0.00041	PCDHB13	+	FALSE
chr1	67874859	T	C	1.49998E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr7	102004769	T	G	5.29897E-05	LOC100289561,LOC100630923	+	FALSE
chr3	156258255	T	C	0.00059	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	154554947	T	G	0.00511	ADAR	-	FALSE
chr2	55516938	A	T	0.00265	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	65690461	G	A	0.00115	AK4	+	FALSE
chr4	39552070	T	C	0.00068	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	40214333	A	G	0.00112	PPIE	+	TRUE	AluSq2	SINE,Alu
chr12	121772025	T	C	0.00562	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	10521238	T	C	0.00797	DFFA	-	TRUE	AluY	SINE,Alu
chr12	133334739	T	C	0.00388	ANKLE2	-	TRUE	AluSz	SINE,Alu
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	45187511	T	C	7.71832E-06	C1orf228	+	FALSE	U5	SINE,Alu
chr11	65404870	C	T	0.00160	PCNX3	+	FALSE
chr3	119545349	T	C	0.00805	GSK3B	-	FALSE
chr5	154194456	G	C	0.00831	LARP1	+	FALSE
chr1	16890656	C	T	0.00812	NBPF1	-	FALSE
chr5	147650355	A	C	0.00222	LOC102546294,SPINK13	+,-	FALSE	MLT1D	SINE,Alu
chr5	96366326	G	C	0.00120		.	FALSE	(TG)n	SINE,Alu
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	32373831	T	G	0.00252	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr3	10143199	A	G	0.00496	FANCD2,FANCD2OS	+,-	FALSE	AluSc8	SINE,Alu
chr19	11257673	T	C	0.00211	SPC24	-	TRUE	AluSp	SINE,Alu
chr1	138156	G	T	0.00048	LOC729737	-	FALSE
chr1	10520532	T	C	0.00150		.	FALSE	AluSx1	SINE,Alu
chr9	125609939	A	T	0.00693		.	FALSE
chr3	10290512	A	G	0.00289	TATDN2	+	FALSE
chr1	3545191	C	T	0.00165	TPRG1L	+	FALSE
chr3	10192784	A	G	1.73909E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr7	66421684	T	G	0.00042	TMEM248	+	FALSE	AluJr	SINE,Alu
chr2	238678004	A	G	0.00631	LRRFIP1	+	FALSE
chr1	179326908	A	G	6.25947E-07	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr1	16932429	C	G	0.00823	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr5	149829071	T	C	0.00407	RPS14	-	FALSE
chr8	12884103	T	C	0.00033	KIAA1456	+	FALSE	MIR	SINE,Alu
chr3	49762662	G	T	6.99764E-06	IP6K1	-	FALSE
chr2	128602366	T	C	0.00236		.	FALSE	AluSq2	SINE,Alu
chr1	6282587	T	C	7.24363E-07	ICMT	-	TRUE
chrX	77083116	T	C	0.00658	MAGT1	-	TRUE	AluSg	SINE,Alu
chr5	49692633	T	G	0.00808	EMB	-	FALSE
chrX	37699364	C	G	0.00695	DYNLT3	-	FALSE
chr1	16945227	G	T	0.00353	CROCCP2	-	FALSE
chr2	36776054	C	T	0.00028	CRIM1	+	FALSE
chr3	172115590	A	G	0.00355	FNDC3B	+	FALSE
chr1	75175886	T	C	0.00880	CRYZ	-	FALSE
chr6	31947917	C	T	0.00670		.	FALSE
chr1	43897496	G	A	0.00481	SZT2	+	FALSE
chr2	99812289	A	G	0.00040	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr6	31656514	C	T	0.00325		.	FALSE
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr12	109039869	T	C	0.00795	CORO1C	-	FALSE
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr11	769459	T	C	0.00082	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr10	75008847	T	C	0.00349	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr5	96366330	G	C	0.00251		.	FALSE	(TG)n	SINE,Alu
chr5	125962169	A	G	0.00013	PHAX	+	TRUE	AluSc	SINE,Alu
chr12	53435276	T	G	4.45732E-05	EIF4B	+	FALSE
chr6	134492481	A	C	0.00340	SGK1	-	FALSE
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr7	123390143	G	A	0.00910		.	FALSE
chr20	18468351	T	C	0.00169	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	101444069	C	A	0.00962	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr14	70838324	T	C	0.00011	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr17	66264542	A	T	0.00110	ARSG,SLC16A6	+,-	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	6283306	T	C	0.00047	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr1	28661633	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chrX	77083952	T	C	0.00045	MAGT1	-	TRUE	AluSz	SINE,Alu
chr7	6064011	T	A	0.00246	EIF2AK1	-	FALSE
chr1	184761312	T	C	0.00308	FAM129A	-	TRUE	AluJo	SINE,Alu
chr9	131093336	T	C	0.00397	COQ4	+	FALSE	AluY	SINE,Alu
chr1	75196073	C	T	0.00159	CRYZ	-	FALSE
chr1	145323656	A	T	0.00593	NBPF20,NBPF10	+	FALSE
chr1	144481235	A	G	1.18230E-05	NBPF20	+	FALSE
chr3	107526033	T	A	0.00056	BBX	+	FALSE
chr2	72403387	C	A	0.00486	EXOC6B	-	FALSE
chr5	145493224	A	T	0.00251	LARS	-	FALSE
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr15	91044380	G	C	0.00453	IQGAP1	+	FALSE
chr1	10438006	A	T	6.81521E-05	KIF1B	+	FALSE	AluSg	SINE,Alu
chr6	42855954	A	G	0.00190	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	197070442	G	T	0.00468	ASPM	-	FALSE
chr1	93826775	T	C	0.00172	DR1	+	FALSE
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr11	125452298	A	G	0.00583	EI24,STT3A-AS1	+,-	FALSE
chr3	62189465	C	T	2.69664E-05	PTPRG	+	FALSE
chr1	40539201	A	G	0.00028	PPT1	-	FALSE
chr1	38327584	T	C	0.00017	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr5	179665201	C	T	0.00037	MAPK9	-	FALSE	AluSx4	SINE,Alu
chr14	19686683	G	A	0.00021	DUXAP10	+	FALSE
chr5	90074268	G	A	0.00240	ADGRV1	+	FALSE
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr2	29170756	A	T	0.00573	WDR43	+	FALSE
chr1	204526795	A	G	0.00199	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	37331555	T	C	0.00992		.	FALSE	AluJb	SINE,Alu
chr7	29961659	C	G	7.23387E-07	SCRN1	-	FALSE
chr4	17804785	T	C	0.00083	DCAF16	-	TRUE	AluSx	SINE,Alu
chr2	55459824	C	T	0.00786	RPS27A	+	FALSE
chr3	176739580	T	C	4.09936E-06	TBL1XR1	-	FALSE
chr15	41590288	G	T	0.00349	OIP5-AS1	+	FALSE
chr1	108742130	T	C	1.29742E-06	SLC25A24	-	FALSE
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr6	16305357	C	T	0.00559	ATXN1	-	FALSE
chr5	149829075	A	G	0.00277	RPS14	-	FALSE
chr17	65334885	T	C	2.77388E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	220231254	T	C	0.00974	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr12	133314509	T	C	0.00229	ANKLE2	-	TRUE	AluJr	SINE,Alu
chr1	179326882	A	G	0.00020	SOAT1	+	TRUE	AluJo	SINE,Alu
chr5	43700242	A	G	0.00932	NNT	+	FALSE
chr2	187544230	T	A	0.00930	ITGAV	+	FALSE
chr9	19376250	A	T	0.00706		.	FALSE
chr12	124146077	A	G	1.08379E-05	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	36067817	T	C	0.00938	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr2	204082516	G	A	0.00094	NBEAL1	+	FALSE
chr1	108678732	T	C	0.00396	SLC25A24	-	FALSE
chr1	28661576	A	G	0.00625	MED18	+	TRUE	AluSg	SINE,Alu
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr16	10625414	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr2	3193040	G	A	0.00650	TSSC1	-	FALSE
chr1	154554946	C	G	0.00488	ADAR	-	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	36068276	T	C	5.36857E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	36789546	A	G	0.00623	EVA1B	-	FALSE	MIRb	SINE,Alu
chr1	26755455	A	G	0.00342	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	204521576	A	G	0.00021	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chr1	19585545	G	A	0.00696	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	44088112	G	T	0.00822	PTPRF	+	FALSE	(T)n	SINE,Alu
chr7	156763172	A	G	0.00874	NOM1	+	TRUE	AluSx	SINE,Alu
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr1	6281866	A	C	0.00102	ICMT	-	FALSE
chr1	10517689	T	C	0.00504		.	FALSE	AluSx1	SINE,Alu
chr1	120612194	C	G	0.00091	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	44818526	C	G	0.00326	ERI3	-	FALSE
chr1	40219280	T	C	8.82951E-05	PPIE	+	FALSE
chr5	256514	G	C	0.00198	SDHA	+	FALSE
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr1	145293469	G	C	0.00888	NBPF20,NBPF10	+	FALSE
chr2	201842492	T	C	0.00107	FAM126B	-	TRUE	AluJb	SINE,Alu
chr5	52386902	A	G	0.00249	ITGA2	+	FALSE
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	69548320	C	T	7.68354E-05	GFPT1	-	FALSE
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr1	16450928	T	C	0.00113	EPHA2	-	FALSE
chr6	71299074	A	G	0.00824		.	FALSE	AluSx1	SINE,Alu
chr5	175811093	A	G	0.00730	NOP16	-	FALSE
chr1	151966348	C	T	0.00511	S100A10	-	FALSE
chr1	46076599	A	G	0.00116	NASP	+	TRUE	AluSx	SINE,Alu
chr1	38174366	G	T	0.00879	CDCA8	+	FALSE
chr12	25360465	G	A	0.00074	KRAS	-	FALSE
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr2	206862015	G	A	0.00026	INO80D	-	FALSE
chr5	130537933	A	G	0.00084	LYRM7	+	TRUE	AluSp	SINE,Alu
chr5	122359498	A	C	0.00038	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	10520603	T	G	0.00838	DFFA	-	FALSE	AluSc8	SINE,Alu
chr1	35650014	C	A	0.00012	SFPQ	-	FALSE
chr5	177576463	A	T	0.00554		.	FALSE
chr1	16890644	C	T	0.00174	NBPF1	-	FALSE
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr17	61502458	T	A	0.00317	TANC2	+	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr17	27872313	T	C	0.00226	TAOK1	+	FALSE
chr1	8045343	C	A	0.00162		.	FALSE
chr1	38002068	C	T	0.00962	SNIP1	-	FALSE
chr1	36530674	A	G	0.00603		.	FALSE	AluSg	SINE,Alu
chr7	17384437	A	G	0.00192	AHR	+	TRUE	AluSx	SINE,Alu
chr1	1595539	T	C	0.00053	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr11	94801636	C	G	0.00522	SRSF8	+	FALSE
chr3	98531342	A	G	0.00607	DCBLD2	-	FALSE
chr1	6161107	A	T	0.00218	KCNAB2	+	FALSE
chr1	32158374	T	C	0.00134	COL16A1	-	FALSE
chr1	9161365	T	C	4.68504E-05		.	FALSE	AluSx	SINE,Alu
chr8	30536016	T	C	2.97001E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr1	10519200	T	C	0.00059		.	FALSE	AluSx3	SINE,Alu
chr17	4929004	A	G	0.00030	KIF1C	+	TRUE	AluY	SINE,Alu
chr13	32973012	A	C	0.00231	BRCA2	+	FALSE
chr2	99812978	A	G	0.00167	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	10065426	C	T	0.00776	CIDECP	-	FALSE
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr2	85773061	A	G	0.00052	GGCX	-	FALSE
chr1	9161550	G	A	0.00043		.	FALSE
chr1	46662492	G	A	9.93078E-05	POMGNT1	-	FALSE
chr11	61732461	G	T	2.02182E-05	FTH1	-	FALSE
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr17	65334726	T	C	7.47982E-07	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	54896395	A	C	0.00051	SPTBN1	+	FALSE
chr1	47716039	A	G	0.00863	STIL	-	FALSE
chr4	57326291	A	G	0.00424	PAICS	+	TRUE	AluJr	SINE,Alu
chr7	100804430	C	T	0.00629	AP1S1	+	FALSE
chr1	146495576	G	C	0.00107	LOC728989	-	FALSE
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr2	67630980	G	A	0.00225	ETAA1	+	FALSE
chr1	150704483	T	C	0.00028	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr1	31344952	C	T	0.00842	SDC3	-	FALSE
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chr3	122283289	C	A	0.00072	DTX3L,PARP9	+,-	FALSE
chr1	234744480	G	A	0.00237	IRF2BP2	-	FALSE
chr1	214524509	A	G	0.00471	PTPN14	-	FALSE	AluSg	SINE,Alu
chr12	125513906	C	A	0.00464		.	FALSE	AluSx1	SINE,Alu
chr5	68858545	C	G	0.00268	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr1	167973198	A	G	0.00061	DCAF6	+	FALSE
chr1	62579758	G	A	0.00250	PATJ	+	FALSE
chr5	53840199	G	T	0.00857	SNX18	+	FALSE
chr2	73301687	G	A	0.00618	RAB11FIP5	-	FALSE
chr4	17804872	T	C	0.00096	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr12	133298938	A	G	0.00034	PGAM5	+	TRUE	AluSg	SINE,Alu
chr5	134062608	G	T	0.00171	SEC24A	+	FALSE
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr11	68523504	T	C	0.00029	CPT1A	-	TRUE	AluSq	SINE,Alu
chr14	105676287	C	T	0.00036	BRF1	-	FALSE
chr5	79277952	A	C	0.00041	MTX3	-	FALSE	(AC)n	SINE,Alu
chr1	110136683	A	C	0.00183	GNAI3	+	FALSE
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	6282324	T	C	0.00186	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr1	78483452	C	T	0.00739	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr1	19441410	G	A	7.84348E-05	UBR4	-	FALSE
chr3	42592138	G	A	0.00056	SEC22C	-	FALSE
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr2	198368112	G	A	0.00127	HSPE1,HSPE1-MOB4	+	FALSE
chr17	42880190	T	C	0.00284	GJC1	-	TRUE	AluJb	SINE,Alu
chr16	89623623	T	C	0.00740	SPG7	+	FALSE
chr15	84873635	C	T	0.00059	LOC440300,GOLGA2P7	+,-	FALSE

RBP	LARP7
Knock-Method	shRNA
RBP Family	RRM_3
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR624FBY
Platform	HiSeq
Pubmed ID	32252787

LARP7 - Target Gene Network