RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	120163247	T	C	0.00680	ZNF697	-	FALSE
chr2	85133793	G	A	0.00577	TMSB10	+	FALSE
chr1	2160436	C	T	0.00488	SKI	+	FALSE	(CGC)n	SINE,Alu
chr1	16200163	A	G	0.00078	SPEN	+	FALSE
chr21	33974088	A	G	0.00057	C21orf59	-	FALSE
chr1	144595935	G	A	0.00359	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	204301753	T	A	0.00012	RAPH1	-	FALSE
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr1	100548868	T	C	8.06321E-05	MFSD14A	+	FALSE
chr3	45960562	T	A	2.01390E-05	FYCO1	-	FALSE
chr16	90037828	G	A	0.00029	CENPBD1	-	FALSE	Tigger12	SINE,Alu
chr1	12164538	G	A	8.95385E-07	TNFRSF8	+	FALSE
chr1	21545088	T	C	0.00737	ECE1	-	FALSE	AluSx1	SINE,Alu
chr1	16889563	C	A	0.00037	NBPF1	-	FALSE
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr1	86119441	G	A	0.00905	ZNHIT6	-	FALSE
chr6	132617374	C	G	0.00062	MOXD1	-	FALSE
chr1	45671429	G	A	0.00054	ZSWIM5	-	FALSE
chr3	170113815	G	T	0.00586	SKIL	+	FALSE
chr3	197612267	A	G	0.00341		.	FALSE	AluSp	SINE,Alu
chr1	32697110	A	T	5.19592E-06	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	145329095	C	G	0.00261	NBPF20,NBPF10	+	FALSE
chr8	145159712	A	G	0.00402	MAF1	+	FALSE
chr14	53109810	T	C	0.00463	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE
chr13	30084952	G	A	0.00045	SLC7A1	-	FALSE
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr20	42933642	T	C	0.00275	FITM2	-	TRUE	AluJo	SINE,Alu
chr1	33148196	A	G	0.00303	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr3	158320703	C	A	0.00841	MLF1	+	FALSE
chr2	24224040	A	G	0.00882		.	FALSE	AluSp	SINE,Alu
chr3	81539382	C	T	1.63276E-05	GBE1	-	FALSE
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr1	19543352	T	C	0.00098	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16889413	T	C	1.64789E-05	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	179325847	A	G	7.26692E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr1	36770073	A	T	4.33965E-05	THRAP3	+	FALSE
chr1	168218522	A	G	0.00153		.	FALSE	AluSz	SINE,Alu
chr1	9328255	A	G	0.00729	H6PD	+	TRUE	AluJr	SINE,Alu
chr7	94060360	T	G	0.00014	COL1A2	+	FALSE
chr2	102508654	T	G	0.00010	MAP4K4	+	FALSE
chr1	36068325	T	C	0.00049	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	192515510	G	T	0.00559	MB21D2	-	FALSE
chr4	57327022	A	G	0.00057	PAICS	+	TRUE	AluSx1	SINE,Alu
chr12	133298069	A	G	6.69127E-09	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	32681797	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr16	81420621	G	C	0.00214		.	FALSE	L3b	SINE,Alu
chr2	219433597	G	A	0.00328	CNOT9	+	FALSE
chr1	6282426	T	C	0.00513	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	56611540	A	C	0.00198	CCDC85A	+	FALSE
chr14	23795204	G	T	0.00938	BCL2L2-PABPN1,PABPN1	+	FALSE
chr2	55516090	C	T	0.00643	CCDC88A	-	FALSE
chr4	41673604	T	C	0.00580	LIMCH1	+	FALSE
chr10	1086810	T	A	0.00245	IDI2-AS1,IDI1	+,-	FALSE
chr1	10519975	T	C	5.61936E-05		.	FALSE	AluJr	SINE,Alu
chr1	10517352	T	C	0.00050		.	FALSE	AluJr	SINE,Alu
chr1	16974666	C	T	0.00131	MST1P2	+	FALSE
chr1	117531813	T	C	0.00751	PTGFRN	+	FALSE
chr1	93307479	C	A	0.00085	FAM69A,RPL5	+,-	FALSE
chr1	900505	G	C	0.00388	KLHL17	+	FALSE
chr6	150046495	T	C	0.00076	NUP43	-	TRUE	AluSq2	SINE,Alu
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr1	17345250	A	T	0.00183	SDHB	-	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chr2	192555801	C	A	0.00628	LOC105747689	+	FALSE
chr1	880052	C	T	0.00231	NOC2L	-	FALSE
chr2	208619699	A	G	0.00741	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	67451522	A	T	0.00949	MIER1	+	FALSE
chr1	22419433	T	G	0.00200	CDC42	+	FALSE
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr1	92147985	C	A	0.00370	TGFBR3	-	FALSE
chr12	133298339	A	G	1.45756E-07	PGAM5	+	TRUE	AluSp	SINE,Alu
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr1	179876988	C	G	0.00047	TOR1AIP1	+	FALSE
chr6	33384326	A	T	0.00678		.	FALSE
chr1	67874696	T	C	0.00012	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr1	205686520	A	G	0.00980	NUCKS1	-	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	10517653	T	C	0.00038		.	FALSE	AluSx1	SINE,Alu
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr1	225977968	C	T	0.00490	SRP9	+	FALSE
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr6	38140505	A	G	0.00109	BTBD9	-	FALSE
chr1	6282400	T	C	7.25534E-07	ICMT	-	TRUE	AluSz	SINE,Alu
chr6	52365328	T	G	0.00983	TRAM2	-	FALSE	(T)n	SINE,Alu
chr2	112252464	G	A	2.95640E-06	MIR4435-2HG	-	FALSE
chr1	109181317	C	G	0.00166	FAM102B	+	FALSE
chr1	144931330	C	T	0.00479	NBPF20,PDE4DIP	+,-	FALSE
chr12	53807911	A	T	0.00355	SP1	+	FALSE
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr3	148748198	G	A	3.62985E-05	HLTF	-	FALSE
chr1	145513017	A	G	3.59549E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	28662213	A	G	0.00013	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	36068276	T	C	0.00225	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	25570563	A	T	0.00276	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	87328396	A	T	0.00148	SEP15	-	FALSE
chr5	118174735	T	C	0.00046	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	19953120	G	A	0.00212	MINOS1,MINOS1-NBL1	+	FALSE
chr3	194998813	A	G	0.00572	ACAP2	-	FALSE	AluSx1	SINE,Alu
chr1	108742632	C	T	0.00933	SLC25A24	-	FALSE
chr1	179876988	C	G	0.00045	TOR1AIP1	+	FALSE
chr1	148004440	C	A	0.00082	NBPF8	-	FALSE
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	16933629	A	G	0.00310	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr5	180682606	C	A	0.00042	CTC-338M12.4	+	FALSE
chr19	19791273	A	G	0.00121	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr12	121772025	T	C	0.00562	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	200375847	T	G	0.00027	ZNF281	-	FALSE	(T)n	SINE,Alu
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr3	196670086	T	G	1.91816E-05	NCBP2-AS2	+	FALSE
chr5	78532658	C	T	0.00882	JMY	+	FALSE
chr7	128097846	A	G	0.00015	HILPDA	+	TRUE	AluSx1	SINE,Alu
chr3	178741082	A	C	5.87013E-06	ZMAT3	-	FALSE
chr1	63924020	C	T	0.00139	ITGB3BP	-	FALSE
chr1	197070776	C	T	0.00698	ASPM	-	FALSE
chr3	9821914	C	T	7.78954E-06	TADA3	-	FALSE
chr2	27293352	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chr3	10192652	A	G	0.00155	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	196999051	C	G	0.00403	STK17B	-	FALSE	MER1B	SINE,Alu
chr1	162497663	G	A	0.00335	UHMK1	+	FALSE
chr1	79125148	G	A	0.00203	IFI44	+	FALSE
chr1	28662254	A	G	0.00052	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	277003	A	G	1.77913E-11	ACP1	+	FALSE
chr6	31947917	C	T	0.00670		.	FALSE
chr1	7737791	A	C	0.00017	CAMTA1	+	FALSE
chr1	9328213	A	G	5.00055E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	19543459	T	C	0.00540	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr5	125961611	A	G	0.00113	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	205115428	C	T	4.25965E-05	DSTYK	-	FALSE
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr1	155282600	A	G	0.00019	FDPS	+	TRUE	AluSp	SINE,Alu
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr2	109401281	T	G	0.00116	RANBP2	+	FALSE
chr9	17835	A	G	0.00012	WASH1	-	FALSE
chr15	44751350	C	T	0.00260	CTDSPL2	+	FALSE
chr1	150937963	A	G	0.00658	CERS2	-	FALSE	G-rich	SINE,Alu
chr7	299850	G	T	1.36182E-06	FAM20C	+	FALSE
chr1	193058937	C	T	0.00652	TROVE2	+	FALSE	AluSc	SINE,Alu
chr1	22159774	G	A	0.00257	HSPG2	-	FALSE
chr3	66430374	A	T	0.00275	LRIG1	-	FALSE
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr7	129251289	C	T	0.00808		.	FALSE
chr1	6282420	T	C	0.00779	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	189026673	A	G	0.00994	TRIML2	-	FALSE
chr1	100489835	A	G	0.00230	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	53712570	A	C	0.00277	LRP8	-	FALSE	(CA)n	SINE,Alu
chr3	14986104	T	C	6.10128E-05	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr16	80636806	T	G	0.00926	CDYL2	-	FALSE
chr3	15838717	A	C	0.00673	ANKRD28	-	FALSE	(A)n	SINE,Alu
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr1	169824104	G	A	0.00744	SCYL3	-	FALSE
chr1	36067760	T	C	0.00024	PSMB2	-	TRUE	AluSz	SINE,Alu
chr14	53109677	T	C	5.62031E-05	ERO1A	-	FALSE
chr11	6411935	T	C	0.00905	SMPD1	+	FALSE	(CTGGCG)n	SINE,Alu
chr1	100657328	A	G	0.00682	DBT	-	FALSE	(AC)n	SINE,Alu
chr16	74698531	T	C	0.00702	RFWD3	-	TRUE	AluSx3	SINE,Alu
chr1	3729587	A	G	0.00580	CEP104	-	FALSE	(AT)n	SINE,Alu
chr1	200521412	G	A	0.00588	KIF14	-	FALSE
chr1	10517567	T	C	0.00262		.	FALSE	AluSx1	SINE,Alu
chr1	32739982	G	A	0.00300	LCK	+	FALSE
chr4	77996969	T	G	0.00971	CCNI	-	FALSE
chr16	48386425	A	G	0.00152	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	180859304	T	C	2.77658E-06	XPR1	+	FALSE
chr1	1344998	A	G	0.00235		.	FALSE	AluSg	SINE,Alu
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	55062960	G	A	0.00542	ACOT11	+	FALSE
chr1	145369556	A	G	0.00086	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	206579936	A	G	0.00424	SRGAP2	+	FALSE
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr1	38423199	A	T	0.00192	SF3A3	-	FALSE	AluJo	SINE,Alu
chr3	86993604	G	T	0.00195	VGLL3	-	FALSE	AluJo	SINE,Alu
chr3	194789330	G	T	0.00699	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr12	125512173	A	G	0.00285		.	FALSE	AluSx1	SINE,Alu
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr4	763539	G	C	0.00816	PCGF3	+	FALSE
chr10	65382718	G	A	0.00984	REEP3	+	FALSE	AluSc	SINE,Alu
chr3	196660344	T	A	0.00022	SENP5	+	FALSE
chr9	140709880	C	T	0.00178	EHMT1	+	FALSE
chr11	8707395	C	A	9.51875E-07	RPL27A	+	FALSE
chr9	139698779	C	G	0.00106	CCDC183,CCDC183-AS1	+,-	FALSE	L2b	SINE,Alu
chr2	28002599	T	A	0.00566	MRPL33	+	FALSE
chr1	9160989	T	C	0.00609		.	FALSE	AluJb	SINE,Alu
chr1	55060362	G	A	0.00246	ACOT11	+	FALSE
chr1	85718132	C	A	0.00738	C1orf52	-	FALSE
chr1	16932428	C	G	0.00620	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr4	7761286	T	C	8.48634E-10	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	87379493	G	A	0.00353	SEP15	-	FALSE
chr9	115447531	T	C	0.00164	INIP	-	TRUE	AluJb	SINE,Alu
chr19	3467751	C	A	0.00182	NFIC	+	FALSE	(TA)n	SINE,Alu
chr15	85184830	T	C	0.00895	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr2	97020049	T	C	0.00070	NCAPH	+	FALSE
chr1	144014068	T	C	0.00029		.	FALSE
chr2	202030311	T	A	0.00732	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	25570562	T	A	0.00028	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	160967857	T	C	0.00806	F11R	-	TRUE	AluSp	SINE,Alu
chr1	179042482	A	G	0.00079	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	153521525	G	A	0.00013	LOC101928034,S100A3	+,-	FALSE
chr9	137330709	G	T	0.00965	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr1	145512014	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	8823954	G	A	7.64310E-06	ID2	+	FALSE
chr1	229586611	T	C	0.00794	NUP133	-	TRUE	AluSz	SINE,Alu
chr21	34731077	A	G	0.00926	IFNAR1	+	TRUE	AluJr	SINE,Alu
chr1	52816691	T	C	0.00353	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr21	46353985	A	G	0.00985	LINC01547	-	FALSE	MER5A	SINE,Alu
chr1	11084104	G	A	0.00116	TARDBP	+	FALSE
chr4	56294560	A	G	0.00965	CLOCK	-	FALSE
chr1	36534736	A	G	0.00016		.	FALSE	AluJo	SINE,Alu
chr1	19499560	T	C	0.00226	UBR4	-	FALSE
chr2	238253065	C	T	0.00914	COL6A3	-	FALSE
chr17	41144609	G	A	0.00821	RUNDC1	+	FALSE
chr1	79108421	A	T	7.77428E-05	IFI44L	+	FALSE
chr5	140482871	T	G	0.00650	PCDHB3	+	FALSE
chr16	87440117	C	T	1.93168E-06	ZCCHC14	-	FALSE
chr1	145290818	C	G	0.00931	NBPF20	+	FALSE
chr1	117945049	G	A	0.00120	MAN1A2	+	FALSE
chr2	174090339	A	C	2.67746E-05	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	10520202	T	C	0.00825		.	FALSE	AluSx	SINE,Alu
chr1	46164493	T	C	0.00330	IPP	-	TRUE	AluJb	SINE,Alu
chr7	29960812	T	A	1.34773E-06	SCRN1	-	FALSE
chr3	182661952	C	T	0.00438	DCUN1D1	-	FALSE	A-rich	SINE,Alu
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr3	66430372	T	A	0.00300	LRIG1	-	FALSE
chr1	118502771	A	G	0.00466	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	42693597	A	G	0.00106	FOXJ3	-	FALSE
chr2	219460472	T	C	0.00187	CNOT9	+	FALSE
chr1	74665493	G	A	7.81871E-05	FPGT-TNNI3K,FPGT	+	FALSE
chr2	232319524	T	A	0.00040	NCL	-	FALSE
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr2	99812978	A	G	0.00475	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	10168785	T	C	0.00198	BRK1	+	FALSE
chr1	160967938	T	C	0.00270	F11R	-	TRUE	AluSp	SINE,Alu
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr7	102006488	A	T	0.00168	LOC100289561,LOC100630923	+	FALSE
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr5	125961455	A	G	0.00683	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	54571374	A	G	0.00916	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr1	214529740	T	C	0.00356	PTPN14	-	TRUE
chr7	75958140	C	A	0.00090	YWHAG	-	FALSE
chr5	141691252	T	C	0.00596	SPRY4	-	FALSE
chr4	17629934	T	C	0.00178		.	FALSE	MER90	SINE,Alu
chr2	179973026	T	C	0.00210	SESTD1	-	FALSE
chr1	155838369	G	C	0.00346	SYT11	+	FALSE
chr1	145689812	A	G	0.00431	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr4	2943361	T	C	7.19955E-07	NOP14-AS1,NOP14	+,-	FALSE
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr3	43098971	G	T	0.00118	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	85278156	C	T	0.00663		.	FALSE	AluSz6	SINE,Alu
chr1	44415424	A	G	0.00213	IPO13	+	FALSE
chr9	131093336	T	C	0.00397	COQ4	+	FALSE	AluY	SINE,Alu
chr1	15988702	T	C	0.00362		.	FALSE
chr9	139100154	C	G	0.00464	QSOX2	-	FALSE
chr1	10517952	C	A	0.00341		.	FALSE
chr1	86815303	T	C	0.00571	ODF2L	-	FALSE
chr1	146650289	C	T	0.00967	PDIA3P1	+	FALSE
chr1	205687358	T	C	0.00692	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	28825337	A	G	0.00838	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	16932809	C	T	0.00074	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	74332837	G	T	4.72839E-05	TET3	+	FALSE
chr3	10193743	T	C	0.00456	VHL	+	FALSE	AluJr	SINE,Alu
chr3	42610374	A	G	0.00594	SEC22C	-	FALSE
chr8	145139727	C	T	0.00458	GPAA1	+	FALSE
chr6	134492485	C	T	0.00245	SGK1	-	FALSE
chr2	109383604	G	A	0.00331	RANBP2	+	FALSE
chr3	196197477	A	C	0.00174	RNF168	-	FALSE
chr5	132232315	G	A	0.00573	AFF4	-	FALSE
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr1	145116141	G	A	0.00266	NBPF20,SEC22B	+	FALSE
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	31532379	A	G	0.00092	PUM1	-	FALSE
chr1	46662492	G	A	9.93078E-05	POMGNT1	-	FALSE
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr5	37290493	T	C	3.58668E-05		.	FALSE	AluSz	SINE,Alu
chr7	6501836	A	C	0.00081	KDELR2	-	FALSE
chr1	28662186	A	G	0.00774	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	53265766	C	T	0.00088	TKT	-	FALSE
chr7	44047240	G	A	0.00588	POLR2J4,SPDYE1	+,-	FALSE
chr2	96573123	C	T	0.00413	ANKRD36C	-	FALSE
chr4	57326315	A	G	0.00025	PAICS	+	TRUE	AluJr	SINE,Alu
chr12	9395329	G	A	0.00814	LINC00987	+	FALSE
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr1	89447854	G	T	0.00310	KYAT3,RBMXL1	-	FALSE
chr1	179829401	T	C	0.00118	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr18	28571649	A	T	0.00301	DSC3	-	FALSE	MER65C	SINE,Alu
chr1	145284138	G	A	0.00382	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr3	98517013	T	C	1.12976E-12	DCBLD2	-	FALSE
chr6	29857578	A	G	0.00280		.	FALSE
chr5	122165512	C	A	0.00276	SNX2	+	FALSE
chr3	17201871	T	C	0.00626	TBC1D5	-	FALSE
chr3	16301148	T	C	0.00050	DPH3	-	FALSE
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr1	31426815	A	G	0.00797	PUM1	-	FALSE
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr1	67874252	C	A	0.00558	SERBP1	-	FALSE
chr1	150704486	T	C	0.00157	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	119574537	G	A	0.00255	WARS2	-	FALSE
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	144931727	G	A	0.00037	NBPF20,PDE4DIP	+,-	FALSE
chr1	19934793	G	A	0.00376	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	1252221	T	C	0.00186	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr16	81064560	A	G	0.00014	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	168218573	A	G	0.00202		.	FALSE	AluSz	SINE,Alu
chr1	9160900	T	C	0.00628		.	FALSE	AluJb	SINE,Alu
chr2	37429627	A	G	0.00027	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	16932429	C	G	0.00106	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	36789546	A	G	0.00562	EVA1B	-	FALSE	MIRb	SINE,Alu
chr16	747230	C	G	0.00269	FBXL16	-	FALSE
chr2	61764922	G	C	0.00679	XPO1	-	FALSE
chrX	123046329	A	G	0.00809	XIAP	+	FALSE	AluJb	SINE,Alu
chr1	24862649	A	G	0.00074	RCAN3	+	FALSE
chr1	10518733	T	C	0.00952		.	FALSE	AluSx1	SINE,Alu
chr1	148252049	A	C	0.00042	NBPF8,NBPF14,NBPF9	-	FALSE
chr2	10942687	C	T	0.00082	PDIA6	-	FALSE
chr1	10520145	T	C	0.00590		.	FALSE	AluSx	SINE,Alu
chr9	125609941	G	A	0.00043		.	FALSE
chr14	68117864	A	T	0.00744	ARG2	+	FALSE
chr16	18794286	C	T	0.00633	RPS15A	-	FALSE
chr2	64119873	A	T	0.00492	VPS54	-	FALSE
chr1	93297595	G	T	0.00479	RPL5	+	FALSE
chr1	10519982	T	C	3.22355E-05		.	FALSE	AluJr	SINE,Alu
chr1	32661615	A	T	0.00225	TXLNA	+	FALSE
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr17	36104904	A	G	0.00442	HNF1B	-	FALSE	G-rich	SINE,Alu
chr4	120979187	T	C	0.00046		.	FALSE	AluSg4	SINE,Alu
chr3	10005159	A	T	0.00939	EMC3	-	FALSE	(AT)n	SINE,Alu
chr1	33148635	A	G	0.00168	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	195243003	A	C	0.00301	PPP1R2	-	FALSE
chr1	6283264	T	C	0.00561	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	183861750	A	C	1.09807E-05	EIF2B5	+	FALSE
chr1	16889864	C	A	0.00598	NBPF1	-	FALSE
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr3	57612271	T	C	0.00831	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	235612219	T	A	0.00148	TBCE,B3GALNT2	+,-	FALSE
chr2	37330576	T	C	0.00055		.	FALSE	AluSq2	SINE,Alu
chr3	17201882	C	T	0.00282	TBC1D5	-	FALSE
chr7	128143797	A	G	4.50405E-06		.	FALSE	AluSq2	SINE,Alu
chr21	9908316	C	T	0.00719	TEKT4P2	-	FALSE
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr19	7084638	A	G	0.00024	ZNF557	+	TRUE	AluJb	SINE,Alu
chr19	19791276	A	G	0.00069	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu

RBP	DKC1
Knock-Method	shRNA
RBP Family	DKCLD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR118KUN
Platform	HiSeq
Pubmed ID	32252787

DKC1 - Target Gene Network