RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	990984	G	A	0.00787	AGRN	+	FALSE
chr17	57279171	A	G	0.00063	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	25570562	T	A	0.00028	RSRP1	-	FALSE	Alu	SINE,Alu
chr7	193091	C	T	1.15297E-06	FAM20C	+	FALSE
chr1	145273431	A	G	7.55666E-05	NBPF20,NOTCH2NL	+	FALSE
chr5	149829076	G	C	0.00288	RPS14	-	FALSE
chr1	168218543	A	G	7.78857E-07		.	FALSE	AluSz	SINE,Alu
chr2	208620129	A	G	0.00167	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr1	173863209	G	A	0.00156		.	FALSE
chr1	145281656	A	T	0.00839	NBPF20,NOTCH2NL	+	FALSE
chr1	900719	T	A	0.00436	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	10518831	T	C	0.00410		.	FALSE	AluSx1	SINE,Alu
chr9	140709880	C	T	0.00178	EHMT1	+	FALSE
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr3	160969268	C	T	0.00375	NMD3	+	FALSE
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr6	36894337	G	A	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr2	113334414	A	G	0.00281	POLR1B	+	TRUE	AluSz	SINE,Alu
chr12	51325349	C	G	0.00225	METTL7A	+	FALSE	AluSq2	SINE,Alu
chrX	123046598	A	G	0.00371	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	24861704	G	A	0.00345	RCAN3	+	FALSE
chr12	133298121	A	G	1.85542E-11	PGAM5	+	TRUE	AluJo	SINE,Alu
chr10	63954812	A	C	0.00641	RTKN2	-	FALSE
chr14	70838368	T	C	0.00561	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr1	31532379	A	G	0.00061	PUM1	-	FALSE
chr1	25570566	C	G	0.00326	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	234561498	T	C	2.33971E-05	TARBP1	-	FALSE
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr1	109474776	A	G	0.00088	GPSM2,CLCC1	+,-	FALSE	AluSz	SINE,Alu
chr1	54691465	C	T	0.00064	SSBP3	-	FALSE
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	6282401	T	C	0.00026	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	10521200	T	C	0.00013	DFFA	-	TRUE	AluY	SINE,Alu
chr2	206986291	T	C	0.00143		.	FALSE	AluSz	SINE,Alu
chr2	37331525	T	C	0.00091		.	FALSE	AluJb	SINE,Alu
chr1	32372360	C	T	0.00697	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr1	43272842	A	T	5.86577E-06	SVBP	-	FALSE
chr1	11298093	C	T	7.93954E-12	MTOR	-	FALSE
chr19	42375611	A	G	0.00426		.	FALSE	AluSx	SINE,Alu
chr9	125609938	A	T	0.00904		.	FALSE
chr5	154196577	C	T	0.00906	LARP1	+	FALSE
chr7	79848337	G	A	0.00037	GNAI1	+	FALSE
chr1	155403823	A	G	0.00850	ASH1L,POU5F1P4	+,-	FALSE
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	24227417	A	G	0.00514		.	FALSE	AluSc	SINE,Alu
chr1	16893841	C	T	0.00272	NBPF1	-	FALSE
chr3	195395399	G	A	0.00556	SDHAP2	+	FALSE
chr1	16891333	C	T	0.00281	NBPF1	-	FALSE
chr1	10044366	A	G	0.00958	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr2	74333235	C	T	0.00022	TET3	+	FALSE
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr8	27661037	A	T	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr3	195694454	C	T	0.00307	SDHAP1	-	FALSE
chr6	18264326	T	A	0.00067	DEK	-	FALSE
chr3	170021210	C	A	0.00015	PRKCI	+	FALSE
chr2	61152521	G	A	0.00134	REL	+	FALSE
chr1	2335348	C	T	0.00018	RER1	+	FALSE
chr19	10431799	G	T	0.00145	RAVER1	-	FALSE
chr1	168218574	A	G	0.00898		.	FALSE	AluSz	SINE,Alu
chr1	28835934	A	G	0.00566	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr9	131093963	A	G	0.00299	COQ4	+	TRUE	AluJo	SINE,Alu
chr2	3592602	T	C	0.00232	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	63924020	C	T	0.00945	ITGB3BP	-	FALSE
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chr1	10519064	T	C	0.00012		.	FALSE	AluSx3	SINE,Alu
chr1	201488170	A	G	0.00997		.	FALSE	AluSz	SINE,Alu
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr22	35817553	C	T	0.00038	MCM5	+	FALSE
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	9770610	A	G	0.00466	YWHAQ	-	FALSE
chr2	37327590	T	C	0.00063		.	FALSE
chr15	52203664	A	C	0.01000	TMOD3	+	FALSE
chr3	44485914	T	C	0.00920	ZNF445	-	FALSE	MIRb	SINE,Alu
chr1	116947396	A	G	0.00226	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr6	160526910	A	T	0.00672	IGF2R	+	FALSE
chr19	9673276	C	A	0.00085		.	FALSE	Tigger1	SINE,Alu
chr1	40213234	A	G	0.00146	PPIE	+	TRUE	AluSx3	SINE,Alu
chr1	226171340	T	C	0.00462	SDE2	-	TRUE	BC200	SINE,Alu
chr3	196670086	T	G	1.91816E-05	NCBP2-AS2	+	FALSE
chr1	36067760	T	C	0.00044	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	16891333	C	T	0.00011	NBPF1	-	FALSE
chr1	115275398	T	G	0.00474	CSDE1	-	FALSE
chr1	207942482	A	G	0.00715	CD46	+	TRUE	AluSg4	SINE,Alu
chr6	3021448	T	C	0.00126	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr1	17739586	G	A	0.00093	RCC2	-	FALSE
chr1	182569291	A	T	0.00979	RGS16	-	FALSE
chr1	28661653	A	G	0.00483	MED18	+	TRUE	AluSg	SINE,Alu
chr1	33148210	A	G	0.00342	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	17326540	G	A	0.00120	ATP13A2	-	FALSE
chr1	2434523	T	C	9.26798E-05	PLCH2	+	FALSE
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	177976440	C	T	0.00148	LOC730102	-	FALSE
chr3	149237753	G	A	2.17555E-05	WWTR1	-	FALSE	AluSq2	SINE,Alu
chr1	32373858	A	T	0.00100	PTP4A2	-	FALSE
chr1	16945409	T	A	0.00290	CROCCP2	-	FALSE
chr8	26435508	C	T	0.00106	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr2	206982255	T	C	0.00431		.	FALSE	AluSg7	SINE,Alu
chr1	16889596	T	C	0.00093	NBPF1	-	TRUE
chr1	220232144	T	C	1.06602E-07	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	160966376	T	C	0.00996	F11R	-	TRUE	AluSg	SINE,Alu
chr5	40832555	A	T	0.00347	RPL37	-	FALSE
chr1	36186320	T	C	0.00281		.	FALSE	AluSg	SINE,Alu
chr1	54565296	A	G	0.00623	TCEANC2	+	TRUE	AluSx1	SINE,Alu
chr3	66430375	T	A	0.00091	LRIG1	-	FALSE
chr1	46075664	A	G	0.00537	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	154554951	A	G	0.00554	ADAR	-	FALSE
chr1	16889596	T	C	0.00905	NBPF1	-	TRUE
chr1	9427842	A	G	0.00923	SPSB1	+	FALSE
chr1	165877671	T	C	0.00376	UCK2	+	FALSE	(T)n	SINE,Alu
chr19	57802824	G	A	0.00924	ZNF460	+	FALSE
chr2	86272758	G	A	0.00023	POLR1A	-	FALSE
chr7	128143289	A	G	0.00082		.	FALSE	AluSc8	SINE,Alu
chr14	31916792	C	T	3.89824E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr18	33831189	C	A	0.00763	MOCOS	+	FALSE
chr19	4654601	A	G	0.00016	TNFAIP8L1	+	TRUE	AluJb	SINE,Alu
chr7	20177664	T	C	0.00089	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr1	148251814	T	A	0.00353	NBPF8,NBPF14,NBPF9	-	FALSE
chr3	49453834	C	T	0.00518	TCTA	+	FALSE
chr1	36068166	T	C	0.00686	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	40435513	C	A	0.00656	MFSD2A	+	FALSE
chr6	114181223	A	G	0.00365	MARCKS	+	FALSE
chr2	191745655	C	G	0.00163	GLS	+	FALSE
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr6	29857113	C	A	0.00582		.	FALSE
chr1	26299050	G	A	0.00110	PAFAH2	-	FALSE
chr1	19199221	C	T	0.00392	ALDH4A1	-	FALSE
chr1	183105534	T	C	0.00125	LAMC1	+	FALSE
chr5	130537789	A	G	0.00822	LYRM7	+	TRUE	AluJb	SINE,Alu
chr3	22424406	A	T	0.00760		.	FALSE
chr1	19282314	G	T	0.00158	IFFO2	-	FALSE
chr1	114940211	G	T	0.00925	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	153617980	A	G	0.00272	CHTOP	+	FALSE
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr1	26606589	C	G	0.00420	SH3BGRL3	+	FALSE
chr1	569803	G	A	0.00695		.	FALSE
chr2	170103351	G	T	0.00139	LRP2	-	FALSE
chr1	28835847	A	G	0.00553	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr5	14510067	G	T	0.00130	TRIO	+	FALSE
chr5	125961554	A	G	0.00355	PHAX	+	TRUE	AluSz6	SINE,Alu
chr10	51374391	C	G	0.00028	TIMM23B	+	FALSE
chr1	10520145	T	C	0.00424		.	FALSE	AluSx	SINE,Alu
chr6	150047376	T	C	0.00306	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	160967890	T	C	0.00871	F11R	-	TRUE	AluSp	SINE,Alu
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr1	78414329	G	A	0.00922	FUBP1	-	FALSE	A-rich	SINE,Alu
chr4	77082799	G	C	0.00148	SCARB2	-	FALSE
chr1	157043632	C	T	0.00085		.	FALSE
chr3	33458266	T	C	0.00035	UBP1	-	FALSE
chr1	121133392	T	C	0.00651	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr8	128944712	A	C	0.00033	PVT1	+	FALSE
chr1	118409491	A	T	0.00471	GDAP2	-	FALSE	(A)n	SINE,Alu
chr11	63394016	T	C	0.00106	ATL3	-	FALSE
chr2	91955209	G	A	6.38312E-06		.	FALSE
chr3	53265766	C	T	0.00088	TKT	-	FALSE
chr2	203742126	T	C	0.00451		.	FALSE	AluJb	SINE,Alu
chr1	17734207	G	A	0.00020	RCC2	-	FALSE
chr8	91637754	A	T	0.00297	TMEM64	-	FALSE
chr1	244572643	C	A	0.00560	ADSS	-	FALSE
chr1	186641127	A	T	0.00546	PTGS2	-	FALSE
chr5	149829073	A	G	0.00866	RPS14	-	FALSE
chr2	69688897	T	C	0.00888	AAK1	-	TRUE	AluSq2	SINE,Alu
chr20	25428384	A	G	0.00195	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	145512141	A	G	0.00215	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	16889624	T	C	3.50465E-05	NBPF1	-	TRUE
chr15	32820819	T	G	0.00718	WHAMMP1	-	FALSE
chr4	47514685	C	T	2.65771E-05	ATP10D	+	FALSE
chr16	19715543	T	C	0.00879		.	FALSE	AluSg	SINE,Alu
chr5	82877162	G	A	0.00296	VCAN	+	FALSE	(A)n	SINE,Alu
chr4	95173779	T	C	0.00771	SMARCAD1	+	FALSE
chr7	30616247	T	C	0.00887	LOC401320	-	FALSE	THE1B	SINE,Alu
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr8	124262075	G	T	7.79989E-05	ZHX1-C8orf76,ZHX1	-	FALSE
chr8	11701458	T	C	1.82355E-06	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	53680205	C	T	9.80404E-07	C1orf123	-	FALSE
chr1	35647099	A	G	0.00092	SFPQ	-	FALSE
chr1	53288894	A	G	8.27269E-06	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	45721905	A	G	0.00238	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	21808159	G	A	0.00011	NBPF3	+	FALSE
chr3	122283294	G	C	0.00066	DTX3L,PARP9	+,-	FALSE
chr1	211920314	T	C	0.00938	LPGAT1	-	FALSE
chr4	165998152	T	C	0.00288	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	206637133	C	T	0.00909	SRGAP2	+	FALSE
chr1	226352498	T	G	0.00636	ACBD3	-	FALSE
chr2	12858202	C	T	0.00873	TRIB2	+	FALSE
chr16	29454288	T	C	9.60363E-06	SMG1P6,BOLA2-SMG1P6	-	FALSE	Tigger4a	SINE,Alu
chr2	32535797	A	G	0.00910		.	FALSE	AluJb	SINE,Alu
chr1	54871709	T	C	0.00110	SSBP3	-	FALSE
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr4	128758152	A	G	0.00198		.	FALSE	AluSx	SINE,Alu
chr10	121588038	A	C	0.00100	INPP5F	+	FALSE
chr2	206986245	T	C	0.00304		.	FALSE	AluSz	SINE,Alu
chr7	5567112	C	T	0.00000	ACTB	-	FALSE
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr3	194373832	T	C	0.00053	LSG1	-	FALSE
chr8	128752643	G	A	4.26326E-14	MYC	+	FALSE	GA-rich	SINE,Alu
chr7	138730361	T	C	0.00316	ZC3HAV1	-	FALSE	L2-1_AMi	SINE,Alu
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr3	108367794	G	T	0.00434	DZIP3	+	FALSE
chr1	115249239	G	A	1.76451E-06	NRAS	-	FALSE
chr1	45976268	G	A	0.00168	MMACHC	+	FALSE
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	160302244	T	C	0.00310	COPA	-	TRUE
chr1	1549354	G	A	0.00383		.	FALSE	HAL1	SINE,Alu
chr1	117532798	C	G	0.00466	PTGFRN	+	FALSE
chr1	46033497	T	C	0.00719	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	146740502	C	G	0.00692	CHD1L	+	FALSE
chr1	36067752	T	C	1.27861E-08	PSMB2	-	TRUE	AluSz	SINE,Alu
chrX	123045381	A	G	0.00893	XIAP	+	TRUE	AluJo	SINE,Alu
chr1	10519947	T	C	0.00328		.	FALSE	AluJr	SINE,Alu
chr4	57326156	A	G	0.00230	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr1	52817434	T	C	0.00799	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr5	37290416	T	C	0.00162		.	FALSE	AluSz	SINE,Alu
chr3	179115697	T	C	3.71610E-05	GNB4	-	TRUE	AluSg7	SINE,Alu
chr1	16893813	A	G	0.00385	NBPF1	-	FALSE
chr1	156005447	C	A	0.00337	UBQLN4	-	FALSE
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr3	88103602	C	A	0.00284	CGGBP1	-	FALSE
chr1	10502831	A	G	0.00193	APITD1,APITD1-CORT	+	FALSE
chr1	145442111	C	A	0.00090	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	182809019	G	A	0.00274	DHX9	+	FALSE
chr1	10517688	T	C	0.00630		.	FALSE	AluSx1	SINE,Alu
chr1	200375404	T	G	0.00030	ZNF281	-	FALSE
chr1	109818162	T	C	0.00253	CELSR2	+	FALSE
chr1	109818162	T	C	0.00316	CELSR2	+	FALSE
chr1	144614931	G	A	0.00469	NBPF20	+	FALSE
chr3	10322521	T	C	0.00531	TATDN2	+	FALSE
chr1	204520409	A	G	0.00504	MDM4	+	TRUE	AluJb	SINE,Alu
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr1	153914500	G	A	3.11507E-05	DENND4B	-	FALSE
chr1	10517525	T	C	0.00775		.	FALSE	AluSx1	SINE,Alu
chr3	160791358	C	T	0.00018	PPM1L	+	FALSE
chr22	36883967	T	C	0.00051	FOXRED2	-	TRUE	AluSq2	SINE,Alu
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	51434560	G	A	6.87938E-05	CDKN2C	+	FALSE
chr17	4856580	T	C	0.00922	ENO3	+	FALSE
chr10	75009592	T	C	1.74317E-07	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	220231959	T	C	2.75997E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	148556087	G	C	0.00486		.	FALSE
chr2	37328034	T	C	0.00046		.	FALSE
chr5	10436681	G	T	0.00306	MARCH6	+	FALSE
chr1	15394279	G	C	0.00215	KAZN	+	FALSE
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chr1	179044100	A	G	0.00897	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	156567496	C	T	0.00012	GPATCH4	-	FALSE	MIR3	SINE,Alu
chr1	9644562	A	G	0.00337		.	FALSE	AluSx	SINE,Alu
chr5	56559238	T	C	0.00149	GPBP1	+	FALSE
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr12	56510708	A	G	0.00050	RPL41	+	FALSE
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	120113403	T	G	0.00364	FSTL1	-	FALSE
chr2	37331065	T	C	0.00527		.	FALSE	AluSx1	SINE,Alu
chr1	108113839	T	C	1.78857E-05	VAV3	-	FALSE
chr1	10520487	T	C	0.00559		.	FALSE	AluSx1	SINE,Alu
chr1	223945582	G	T	0.00304	CAPN2	+	FALSE	AluSx	SINE,Alu
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr11	68523016	T	C	0.00016	CPT1A	-	TRUE	AluY	SINE,Alu
chr10	75009921	T	C	0.00639	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	9162206	T	C	0.00882		.	FALSE	AluSx	SINE,Alu
chr1	43167907	T	C	0.00072	YBX1	+	FALSE
chr4	120378207	A	G	8.04303E-06	LOC645513	+	FALSE
chr1	87379498	T	G	0.00784	SEP15	-	FALSE
chr1	229586611	T	C	0.00794	NUP133	-	TRUE	AluSz	SINE,Alu
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	75190452	C	T	4.33030E-05	CRYZ	-	FALSE
chr6	126661502	G	T	0.00873	CENPW	+	FALSE
chr3	139076427	C	T	0.00014		.	FALSE
chr1	20976163	C	T	0.00174	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	24289057	G	C	0.00044	PNRC2	+	FALSE
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr1	225974645	A	G	0.00984	SRP9	+	TRUE	AluJr	SINE,Alu
chr1	6704652	C	T	1.57063E-06	DNAJC11	-	FALSE
chr1	184762498	T	C	0.00834	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	110466466	T	C	0.00377	CSF1	+	FALSE
chr2	37331077	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr1	9162224	T	C	0.00124		.	FALSE	AluSx	SINE,Alu
chr12	53435627	A	G	0.00133	EIF4B	+	FALSE
chr3	72426071	T	A	0.00169	RYBP	-	FALSE	(T)n	SINE,Alu
chr1	179042905	A	G	0.00972	FAM20B	+	TRUE
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr2	61154325	T	C	0.00706	REL	+	FALSE	L2b	SINE,Alu
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr11	65179819	T	C	0.00038	FRMD8	+	FALSE
chr1	92147985	C	A	0.00370	TGFBR3	-	FALSE
chr1	10518821	T	C	0.00913		.	FALSE	AluSx1	SINE,Alu
chr1	16890130	A	C	0.00753	NBPF1	-	FALSE
chr1	207943211	G	A	0.00248	CD46	+	FALSE	AluSx1	SINE,Alu
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr1	118167515	C	T	3.85037E-05	FAM46C	+	FALSE
chr2	20449068	A	G	0.00014	PUM2	-	FALSE
chr5	131804838	A	G	0.00036	C5orf56	+	TRUE	MLT1D	SINE,Alu
chr1	21102502	C	A	0.00021	HP1BP3	-	FALSE
chr2	99812465	A	G	0.00367	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	118502685	T	A	0.00333	WDR3,SPAG17	+,-	FALSE
chr1	27202901	T	C	0.00224		.	FALSE	AluSq2	SINE,Alu
chr4	6718811	A	G	1.36854E-07	BLOC1S4	+	FALSE	FLAM_A	SINE,Alu
chr1	38182164	T	A	3.45866E-07	EPHA10	-	FALSE
chr2	37076498	A	C	0.00797	STRN	-	FALSE
chr1	19543353	T	C	0.00091	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	54571491	A	G	0.00538	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr16	48386354	A	G	0.00064	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr8	30536152	T	C	0.00015	GSR	-	TRUE	AluJr	SINE,Alu
chr1	204521625	A	G	0.00808	MDM4	+	TRUE	AluSg	SINE,Alu
chr10	75009722	T	C	0.00555	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr4	155457049	T	A	0.00434	PLRG1	-	FALSE	L2d2	SINE,Alu
chr3	183209052	T	C	0.00041	KLHL6	-	TRUE	AluSq	SINE,Alu
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr17	38974612	T	C	0.00963	KRT10	-	FALSE
chr17	42877749	T	C	0.00287	GJC1	-	TRUE	AluSg	SINE,Alu
chr3	99517483	C	T	0.00070	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	36067925	T	C	0.00397	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	45975498	A	G	0.00018	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr5	125961455	A	G	0.00683	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	225706943	C	T	0.00229	ENAH	-	FALSE
chr2	26477130	T	C	0.00501	HADHB	+	FALSE
chr1	89447715	T	G	0.00021	KYAT3,RBMXL1	-	FALSE
chr4	17633798	A	G	0.00053	FAM184B	-	FALSE	AluSz	SINE,Alu
chr4	17629921	A	G	0.00454		.	FALSE	MER90	SINE,Alu
chr3	42826041	T	G	5.78537E-12	HIGD1A	-	FALSE
chr1	1344998	A	G	0.00062		.	FALSE	AluSg	SINE,Alu
chr5	72801321	T	A	0.00280	BTF3	+	FALSE
chr7	20178562	T	C	1.84789E-06	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr5	37289087	T	C	4.02459E-05		.	FALSE	AluSp	SINE,Alu
chr1	24296856	T	G	0.00564		.	FALSE	AluSg	SINE,Alu
chr1	6283332	T	C	0.00387	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	228421461	G	C	0.00069	AGFG1	+	FALSE
chr3	57743171	C	T	1.04824E-07	SLMAP	+	FALSE
chr6	24720534	T	C	0.00053		.	FALSE
chr4	39550549	T	C	0.00014	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr17	76117147	G	A	0.00606	TMC6	-	FALSE
chr1	145689533	A	G	0.00618	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	78603279	A	G	0.00089	GIPC2	+	FALSE
chr5	125961649	A	G	0.00302	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	33149376	A	G	0.00357	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	28826023	A	G	0.00143	PHACTR4	+	FALSE	AluJb	SINE,Alu
chr1	231154935	C	T	0.00093	FAM89A	-	FALSE
chr6	42856156	A	G	0.00190	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr4	170017406	A	T	0.00534	SH3RF1	-	FALSE
chr3	86992161	C	G	0.00050	VGLL3	-	FALSE	(GT)n	SINE,Alu
chr6	160101723	T	C	0.00234	SOD2	-	TRUE	AluSz	SINE,Alu
chr1	16935130	C	T	0.00019	NBPF1	-	FALSE
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr1	44072018	C	T	0.00160	PTPRF	+	FALSE
chr19	13883927	A	G	0.00143	MRI1	+	TRUE	AluSz	SINE,Alu
chr8	23290112	T	C	0.00121	ENTPD4	-	TRUE	AluY	SINE,Alu
chr1	168220340	A	G	0.00960		.	FALSE	AluSz6	SINE,Alu
chr2	201676441	G	A	0.00140	LOC101927795,BZW1	+,-	FALSE
chr2	37330487	T	C	0.00840		.	FALSE	AluSq2	SINE,Alu
chr1	247350690	G	C	0.00364		.	FALSE	L1MA7	SINE,Alu
chr3	15113656	T	C	1.73787E-06	RBSN	-	TRUE	AluSz6	SINE,Alu
chr21	34731077	A	G	0.00926	IFNAR1	+	TRUE	AluJr	SINE,Alu
chr2	203744629	T	C	0.00363		.	FALSE	AluSx1	SINE,Alu
chr1	100549715	T	A	0.00765	SASS6	-	FALSE
chr17	8378932	A	G	0.00372	MYH10	-	FALSE
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr3	178978532	T	C	0.00061	KCNMB3	-	FALSE
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr1	220231461	T	C	0.00050	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr19	42375549	A	G	4.56329E-05		.	FALSE	AluSx	SINE,Alu
chr1	19543282	T	C	0.00020	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	90497768	A	G	4.54321E-06	ZNF326	+	TRUE
chr21	34730077	A	G	0.00019	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr2	9770610	A	G	0.00486	YWHAQ	-	FALSE
chr1	244219905	G	T	0.00772	ZBTB18	+	FALSE
chr2	204312707	C	T	0.00154	RAPH1	-	FALSE
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr2	26616356	A	G	0.00030	EPT1	+	FALSE
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr1	146650916	C	T	0.00025	PDIA3P1	+	FALSE
chr1	28422194	A	C	0.00018		.	FALSE
chr16	74656352	T	C	0.00187	RFWD3	-	TRUE	AluJb	SINE,Alu
chr8	23087535	A	G	0.00491	LOC389641	+	FALSE	AluSx1	SINE,Alu
chr1	109747437	A	G	0.00104	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr1	32372387	A	C	0.00757	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr22	41252612	G	A	0.00561	ST13	-	FALSE
chr4	165998654	T	C	0.00953	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr1	197070776	C	T	0.00600	ASPM	-	FALSE
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr20	25427823	A	G	0.00054	GINS1	+	TRUE	AluSz	SINE,Alu
chr8	144940368	C	T	0.00020	EPPK1	-	FALSE
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr6	150045755	T	C	0.00041	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	19542631	T	C	0.00031	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	179044110	A	G	0.00885	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	154454628	T	C	0.00099	SHE	-	TRUE	AluSq2	SINE,Alu
chr1	10520258	T	C	0.00746		.	FALSE	AluSx	SINE,Alu
chr1	78184325	A	G	0.00150	USP33	-	FALSE

RBP	PRPF6
Knock-Method	shRNA
RBP Family	PRP1_N
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR783LUA
Platform	HiSeq
Pubmed ID	32252787

PRPF6 - Target Gene Network