RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	35648712	G	A	0.00298	SFPQ	-	FALSE
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	155282600	A	G	0.00019	FDPS	+	TRUE	AluSp	SINE,Alu
chr1	326499	A	G	0.00583		.	FALSE
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr5	53841240	A	G	0.00416	SNX18	+	FALSE
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr19	21367098	A	G	0.00147	ZNF431	+	TRUE	AluSc	SINE,Alu
chr2	206858904	C	T	0.00783	INO80D	-	FALSE
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr16	48386442	A	G	0.00964	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	147091972	C	T	8.17896E-06	BCL9	+	FALSE
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr9	19376249	G	T	0.00658		.	FALSE
chr16	69151495	T	A	0.00304	HAS3	+	FALSE	(T)n	SINE,Alu
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	143915879	A	C	0.00097		.	FALSE
chr1	144931392	G	A	0.00286	NBPF20,PDE4DIP	+,-	FALSE
chr1	27202982	T	C	0.00850		.	FALSE	AluSq2	SINE,Alu
chr2	61277776	A	G	0.00178	PEX13	+	TRUE	AluY	SINE,Alu
chr1	233518885	T	C	0.00021	MLK4	+	FALSE	(TTTC)n	SINE,Alu
chr17	28506279	G	A	0.00634	NSRP1	+	FALSE
chr2	32533707	A	G	0.00395		.	FALSE	AluSp	SINE,Alu
chr4	77997064	A	G	0.00283	CCNI	-	FALSE	(A)n	SINE,Alu
chr7	98015394	G	C	0.00118	BAIAP2L1	-	FALSE
chr1	231154935	C	T	0.00093	FAM89A	-	FALSE
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	87328400	C	T	0.00755	SEP15	-	FALSE
chr17	41133090	A	T	0.00148	RUNDC1	+	FALSE
chr21	44331206	A	G	0.00167		.	FALSE	AluSz	SINE,Alu
chr1	19934839	A	G	0.00052	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr10	47221465	T	C	0.00201		.	FALSE	AluJb	SINE,Alu
chr1	26608008	T	A	0.00496	SH3BGRL3	+	FALSE
chr3	73116437	C	G	1.00237E-05	PPP4R2	+	FALSE
chr2	29170763	G	A	5.21672E-05	WDR43	+	FALSE
chr1	949472	G	A	2.93477E-10	ISG15	+	FALSE
chr1	28826085	A	G	0.00153	PHACTR4	+	TRUE	AluJb	SINE,Alu
chrX	123046290	A	G	0.00524	XIAP	+	TRUE	AluJb	SINE,Alu
chr2	37331578	T	C	0.00675		.	FALSE	AluJb	SINE,Alu
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr20	25428724	A	G	0.00033	GINS1	+	TRUE	AluJb	SINE,Alu
chr5	79923424	T	C	0.00054	DHFR	-	TRUE	AluJr	SINE,Alu
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr1	11188109	C	A	0.00817	MTOR	-	FALSE
chr1	28939803	C	T	1.27013E-09	TAF12	-	FALSE
chr1	16576290	G	A	0.00104	FBXO42	-	FALSE	A-rich	SINE,Alu
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr1	235383188	A	G	0.00531	ARID4B	-	FALSE
chr14	19686228	C	T	0.00106	DUXAP10	+	FALSE
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr5	70503941	C	A	0.00130		.	FALSE
chr10	112596282	C	T	0.00885	RBM20	+	FALSE
chr11	124954212	C	A	0.00827	SLC37A2	+	FALSE
chr1	145511929	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	1252221	T	C	0.00728	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr2	61764920	C	A	0.00363	XPO1	-	FALSE
chr1	9642827	G	A	0.00521	SLC25A33	+	FALSE
chr5	41917720	T	G	0.00727	C5orf51	+	FALSE
chr4	1982726	C	T	0.00828	WHSC1	+	FALSE
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr1	28836975	A	G	0.00782	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	38275432	G	T	0.00536	MTF1	-	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr1	65696034	G	C	0.00803	AK4	+	FALSE
chr1	32681795	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr3	66430378	T	A	0.00326	LRIG1	-	FALSE
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr3	155660833	A	G	0.00020		.	FALSE	AluSz	SINE,Alu
chr2	99812464	A	G	1.88485E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr9	116022893	C	A	0.00060	SLC31A1	+	FALSE
chr1	23847464	C	A	0.00895	E2F2	-	FALSE
chr14	50361197	G	T	1.76251E-06	ARF6	+	FALSE
chr1	212277618	T	G	0.00173	DTL	+	FALSE
chr4	2940164	T	C	0.00115	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	179326882	A	G	0.00020	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	28261661	G	A	0.00872	SMPDL3B	+	FALSE
chr3	16357708	A	G	0.00098	RFTN1	-	FALSE
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr1	148003730	T	C	0.00415	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	1594835	C	G	0.00195	CDK11B,SLC35E2B	-	FALSE
chr3	196670095	C	A	1.97381E-07	NCBP2-AS2	+	FALSE
chr1	16974666	C	T	0.00131	MST1P2	+	FALSE
chr3	40503772	T	A	0.00153	RPL14	+	FALSE
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr19	45406536	G	T	0.00518	TOMM40	+	FALSE
chr8	11172477	C	T	0.00805	MTMR9	+	FALSE
chr9	37503490	A	G	0.00612	POLR1E	+	TRUE	AluJb	SINE,Alu
chr1	87209658	G	A	0.00219	SH3GLB1	+	FALSE
chr10	49609751	A	G	0.00979	MAPK8	+	FALSE
chr2	39212565	T	G	0.00662	SOS1	-	FALSE
chr1	234561498	T	C	2.33971E-05	TARBP1	-	FALSE
chr2	37331627	T	C	0.00044		.	FALSE	AluJb	SINE,Alu
chr1	11181327	C	T	0.00525	MTOR	-	FALSE
chr1	144918957	T	A	0.00484	NBPF20,PDE4DIP	+,-	FALSE
chr2	37331119	T	C	0.00122		.	FALSE	AluSx1	SINE,Alu
chr7	65618870	A	G	0.00097	CRCP	+	TRUE	AluSx3	SINE,Alu
chr8	48890247	A	G	2.58682E-14	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	145689491	A	G	0.00694	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr5	118174735	T	C	0.00139	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr3	119388380	T	C	0.00110	COX17	-	FALSE
chr1	31532379	A	G	0.00092	PUM1	-	FALSE
chr7	4809333	A	G	0.00067	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr1	201845899	G	T	1.72907E-05	IPO9	+	FALSE
chr1	53289940	A	G	0.00694	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	16893813	A	G	7.34801E-05	NBPF1	-	FALSE
chr1	47140872	T	C	0.00081	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	25894463	G	A	0.00596	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	37429532	A	G	0.00014	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	16889642	T	C	0.00480	NBPF1	-	TRUE
chr1	10517512	T	C	0.00498		.	FALSE	AluSx1	SINE,Alu
chr1	9331101	A	G	5.45177E-05	H6PD	+	FALSE	AluSx	SINE,Alu
chr4	17629934	T	C	0.00178		.	FALSE	MER90	SINE,Alu
chr1	120695049	G	A	0.00129		.	FALSE
chr1	16892907	G	A	0.00244	NBPF1	-	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr1	145512024	A	G	0.00392	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	33149399	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr6	7310259	A	G	0.00092	SSR1	-	FALSE
chr15	41590978	A	G	1.05775E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr6	150045926	T	C	0.00053	NUP43	-	TRUE	AluSq	SINE,Alu
chr7	116437206	A	G	0.00118	MET	+	FALSE
chr1	15899549	T	C	0.00960	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	101442570	A	T	0.00377	SLC30A7	+	FALSE
chr4	56295161	T	A	0.00075	CLOCK	-	FALSE	(T)n	SINE,Alu
chr1	36068231	T	C	9.19439E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	15113657	T	C	2.06253E-05	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	184663537	A	C	0.00256	EDEM3	-	FALSE
chr5	37290504	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr15	41590973	A	G	1.61675E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr16	81422951	T	C	0.00074		.	FALSE
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr1	10517276	T	C	0.00283		.	FALSE	AluJr	SINE,Alu
chr7	129474438	C	T	0.00034	UBE2H	-	FALSE
chr1	89447868	G	T	0.00236	KYAT3,RBMXL1	-	FALSE
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chrX	77083915	T	C	0.00075	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	146649884	T	A	0.00612	PDIA3P1	+	FALSE
chr1	214527252	G	A	0.00181	PTPN14	-	FALSE	MADE2	SINE,Alu
chr1	93603177	T	C	0.00364	MTF2	+	FALSE
chr1	9815354	T	G	0.00212	CLSTN1	-	FALSE
chr6	3154871	A	C	7.50591E-06	TUBB2A	-	FALSE
chr2	72968436	G	C	0.00171	EXOC6B	-	FALSE
chr1	32557486	A	G	0.00525	TMEM39B	+	FALSE
chr4	89181478	T	C	0.00656	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	28826250	A	G	0.00489	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr1	145512073	A	G	0.00066	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	77655378	T	C	0.00555	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	54691921	G	A	0.00032	SSBP3	-	FALSE
chr3	88104159	A	C	0.00279	CGGBP1	-	FALSE
chr2	61316542	A	G	0.00033	KIAA1841	+	TRUE	AluSx1	SINE,Alu
chr10	75009579	T	C	3.24788E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr2	69688754	T	C	0.00319	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	38326643	T	C	0.00458	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr1	6283306	T	C	0.00558	ICMT	-	TRUE	AluSx3	SINE,Alu
chr4	114135223	A	T	5.22810E-05	ANK2	+	FALSE
chr14	53242674	T	C	1.74446E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	117945042	G	A	0.00150	MAN1A2	+	FALSE
chr8	128944720	G	T	0.00751	PVT1	+	FALSE
chr14	75202372	A	G	8.84130E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chr1	25554719	G	A	0.00403	SYF2	-	FALSE
chr1	179876988	C	G	0.00045	TOR1AIP1	+	FALSE
chr22	18571431	A	G	0.00158	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	1152310	C	T	0.00133	SDF4	-	FALSE
chr1	25687901	T	C	0.00926	TMEM50A	+	FALSE
chr16	81744038	T	C	6.34278E-05	CMIP	+	FALSE	(CCGC)n	SINE,Alu
chr1	19543352	T	C	0.00087	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10517538	T	C	0.00840		.	FALSE	AluSx1	SINE,Alu
chr1	145116142	A	T	0.00570	NBPF20,SEC22B	+	FALSE
chr4	52888026	A	C	0.00677	SGCB	-	FALSE
chr1	327407	A	G	3.55459E-07		.	FALSE
chr6	42854682	A	G	5.90307E-05	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	46075791	A	G	0.00120	NASP	+	TRUE	AluSx4	SINE,Alu
chr16	57505656	T	G	0.00107	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr1	6314171	G	A	0.00855	GPR153	-	FALSE
chr1	160967755	C	T	0.00563	F11R	-	FALSE	(T)n	SINE,Alu
chr6	42981525	G	C	0.00041	MEA1	-	FALSE
chr1	200521412	G	A	0.00110	KIF14	-	FALSE
chr1	1252441	T	C	0.00602	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr3	58304244	G	A	0.00560	RPP14	+	FALSE	AluSz	SINE,Alu
chr1	36068325	T	C	0.00065	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	116256595	C	A	5.71236E-05		.	FALSE
chr1	100658578	G	A	5.62742E-07	DBT	-	FALSE
chr1	161931628	G	C	0.00476	ATF6	+	FALSE
chr7	137561078	G	A	0.00558	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr3	45267310	C	T	0.00038	TMEM158	-	FALSE
chr1	46075720	A	G	0.00105	NASP	+	TRUE	AluSx4	SINE,Alu
chr15	65442112	T	C	0.00529	CLPX	-	TRUE	AluSg	SINE,Alu
chr3	156258283	T	C	0.00686	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	145116325	T	C	0.00101	NBPF20,SEC22B	+	FALSE	(TTTTGTTT)n	SINE,Alu
chr1	89649462	T	C	2.70922E-05	GBP4	-	TRUE	AluJb	SINE,Alu
chr1	206579936	A	G	0.00747	SRGAP2	+	FALSE
chr1	111682307	G	C	0.00637	DRAM2,CEPT1	+,-	FALSE
chr1	160920966	C	T	0.00980	ITLN2	-	FALSE
chr1	244572644	G	C	0.00033	ADSS	-	FALSE
chr7	140153699	C	A	0.00075	MKRN1	-	FALSE
chr1	6283264	T	C	0.00561	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	65298625	G	A	0.00761	RAVER2	+	FALSE	X12_DNA	SINE,Alu
chr2	37327685	T	C	6.61966E-05		.	FALSE
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr1	46075191	C	A	0.00457	NASP	+	FALSE	A-rich	SINE,Alu
chr10	114209888	A	G	0.00386	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr1	16912029	C	G	0.00699	NBPF1	-	FALSE
chr7	138265310	A	G	0.00121	TRIM24	+	FALSE
chr5	139931627	C	T	0.00073	SRA1	-	FALSE
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr3	37094679	G	A	7.98870E-06	LRRFIP2	-	FALSE
chr1	19984104	A	C	0.00638	MINOS1-NBL1,NBL1	+	FALSE
chr7	65844563	G	A	0.00581	LINC00174	-	FALSE
chr1	144598755	G	A	0.00044	NBPF20	+	FALSE
chr12	133298275	A	G	4.13546E-09	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr1	145689566	A	G	0.00918	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr17	48771486	G	A	0.00081	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr1	144595886	G	A	0.00205	NBPF20	+	FALSE	AluJb	SINE,Alu
chr3	182637840	C	T	1.61172E-05	ATP11B	+	FALSE
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr1	237065326	C	T	0.00376	MTR	+	FALSE
chr21	34728175	A	G	6.62284E-07	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr12	74934944	A	G	0.00094	ATXN7L3B	+	FALSE
chr3	33187831	C	T	6.36740E-05	CRTAP	+	FALSE
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr5	118729619	A	G	0.00586	TNFAIP8	+	FALSE
chr1	231377081	C	T	6.17358E-06	GNPAT	+	FALSE
chr1	168215575	G	A	0.00688	ANKRD36BP1	-	FALSE
chr1	109605647	G	A	0.00019		.	FALSE	AluY	SINE,Alu
chr3	141667460	T	G	0.00193	TFDP2	-	FALSE
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr1	59124803	C	T	0.00974	MYSM1	-	FALSE
chr3	5258985	T	C	0.00436	EDEM1	+	FALSE
chr2	206983267	T	C	0.00133		.	FALSE	AluJb	SINE,Alu
chr3	178741082	A	C	0.00145	ZMAT3	-	FALSE
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr5	55235967	A	G	0.00639	IL6ST	-	FALSE	(AT)n	SINE,Alu
chr1	10518591	A	T	0.00811		.	FALSE
chr1	19543456	T	C	0.00451	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr17	56049829	T	C	5.66836E-08	VEZF1	-	TRUE
chr3	100119819	C	T	0.00850	TOMM70	-	FALSE
chr1	11810674	G	A	0.00279	AGTRAP	+	FALSE
chr1	19542239	T	C	0.00043	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	55207982	C	A	0.00063	MROH7-TTC4,TTC4	+	FALSE
chr8	144357975	C	T	0.00444	GLI4	+	FALSE
chr1	110950295	C	A	0.00359	LAMTOR5	-	FALSE
chr3	15094061	G	A	0.00188	MRPS25	-	FALSE
chr1	15989141	C	G	0.00364		.	FALSE
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr6	44417159	A	G	0.00959	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr6	109785887	T	C	7.14632E-06	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr19	30192475	G	A	0.00575	C19orf12	-	FALSE	MER2	SINE,Alu
chr1	35650022	C	A	0.00762	SFPQ	-	FALSE
chr2	201774600	T	C	1.56082E-05		.	FALSE	AluJr4	SINE,Alu
chr9	136209400	A	G	0.00328	MED22	-	FALSE
chr10	75009921	T	C	0.00639	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	16959698	G	A	0.00086		.	FALSE
chr17	45761110	G	T	0.00816		.	FALSE
chr5	72801329	T	A	0.00073	BTF3	+	FALSE
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr1	202821382	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr14	50053348	G	A	0.00067		.	FALSE	7SLRNA	SINE,Alu
chr7	152343700	T	C	0.00061	XRCC2	-	TRUE	AluSx3	SINE,Alu
chr14	53242746	T	C	0.00051	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	10520202	T	C	0.00825		.	FALSE	AluSx	SINE,Alu
chr12	69237013	A	G	0.00659	MDM2	+	TRUE
chr3	194999352	A	T	0.00482	ACAP2	-	FALSE
chr12	124146597	A	G	0.00121	GTF2H3	+	TRUE	AluSq2	SINE,Alu
chr1	118166877	C	T	0.00980	FAM46C	+	FALSE
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr2	102508655	G	T	0.00817	MAP4K4	+	FALSE
chr3	191075902	C	T	1.38271E-08	CCDC50	+	FALSE
chr2	20648140	A	C	6.93182E-06	RHOB	+	FALSE
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	15736656	A	G	0.00958	EFHD2	+	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chr3	98620372	G	A	3.94317E-05	DCBLD2	-	FALSE
chr1	6283305	T	C	0.00496	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	26226610	C	T	0.00955	STMN1	-	FALSE
chr3	100083427	T	A	0.00456	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	46033106	T	C	0.00547	AKR1A1	+	FALSE
chr1	19543973	T	C	0.00236	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr17	25640011	A	G	0.00228	WSB1	+	TRUE	AluSx	SINE,Alu
chr1	9644562	A	G	0.00337		.	FALSE	AluSx	SINE,Alu
chr2	128605225	G	A	0.00401	POLR2D	-	FALSE
chr6	41888827	C	G	0.00936	MED20	-	FALSE
chr1	64095111	A	G	0.00201	PGM1	+	FALSE
chr1	145826918	G	C	0.00829	NBPF20,NBPF10,GPR89A	+,-	FALSE
chr1	53679610	G	A	0.00073	CPT2	+	FALSE	AluSz	SINE,Alu
chr3	12613866	T	C	0.00043	MKRN2	+	FALSE
chr17	19091395	C	T	0.00852		.	FALSE	U3	SINE,Alu
chr5	154194420	G	A	0.00137	LARP1	+	FALSE
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr14	23300642	C	A	0.00266	MRPL52	+	FALSE	MIRb	SINE,Alu
chr2	85824712	C	A	0.00663	RNF181	+	FALSE
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr1	35899684	C	T	0.00051	KIAA0319L	-	FALSE	AluSc8	SINE,Alu
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr1	168218494	A	G	0.00317		.	FALSE	AluSz	SINE,Alu
chr14	74526155	T	C	0.00054	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr19	41220529	C	T	0.00175	COQ8B	-	FALSE
chr10	79800439	A	T	0.00380	RPS24	+	FALSE
chr1	27202812	T	C	0.00353		.	FALSE	AluSq2	SINE,Alu
chr2	37329300	T	C	0.00590		.	FALSE	AluJr4	SINE,Alu
chr1	143399198	C	T	0.00146		.	FALSE
chr5	149823789	G	T	0.00793		.	FALSE
chr7	100031495	C	T	0.00475	MEPCE	+	FALSE
chr1	94353045	G	T	0.00351	GCLM	-	FALSE	AluSg	SINE,Alu
chr10	114209912	A	G	0.00060	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr11	67765170	G	T	0.00185	UNC93B1	-	FALSE
chr6	47594192	C	T	0.00591	CD2AP	+	FALSE
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr1	45242978	A	G	0.00604	RPS8	+	TRUE	AluSz	SINE,Alu
chr1	59122056	G	C	1.57132E-06	MYSM1	-	FALSE
chr3	121435624	C	T	0.00063	GOLGB1	-	FALSE
chr2	29023124	G	T	0.00477	PPP1CB	+	FALSE
chr10	75009591	T	C	8.39163E-08	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr9	115447534	T	C	0.00203	INIP	-	TRUE	AluJb	SINE,Alu
chr6	1395043	T	C	0.00055	FOXF2	+	FALSE
chr1	16892277	G	T	0.00021	NBPF1	-	FALSE
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr1	26755643	A	G	0.00068	LIN28A	+	FALSE	AluSc	SINE,Alu
chr7	6064009	C	G	0.00273	EIF2AK1	-	FALSE
chr1	16891379	C	T	0.00074	NBPF1	-	FALSE
chr1	32799437	C	T	0.00318	MARCKSL1	-	FALSE
chr1	28836973	A	G	0.00289	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr3	156259308	T	C	0.00013	SSR3	-	TRUE	AluSq2	SINE,Alu
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr1	28662186	A	G	8.22643E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr4	56294560	A	G	0.00965	CLOCK	-	FALSE
chr2	37330614	T	C	0.00410		.	FALSE	AluSq2	SINE,Alu
chr3	156258295	T	C	0.00096	SSR3	-	TRUE	AluYk3	SINE,Alu
chr17	7482018	C	A	9.29146E-05	SENP3-EIF4A1,EIF4A1	+	FALSE
chr6	24720533	C	G	0.00023		.	FALSE
chr2	101893244	C	A	0.00332	RNF149	-	FALSE	(A)n	SINE,Alu
chr1	6582221	T	C	0.00169	NOL9	-	TRUE	AluSq4	SINE,Alu
chr6	31236900	G	A	0.00167		.	FALSE
chr1	40923019	G	A	0.00019	ZFP69B	+	FALSE
chr1	204525667	A	G	3.94227E-05	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	178444613	T	G	0.00630	RASAL2	+	FALSE
chr11	126147697	G	A	0.00237	FOXRED1	+	FALSE
chr10	75008965	T	C	0.00017	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	1252248	A	G	0.00938	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr1	9163290	T	C	0.00016		.	FALSE	AluSp	SINE,Alu
chr1	10518733	T	C	0.00399		.	FALSE	AluSx1	SINE,Alu
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr3	196659892	T	G	0.00620	SENP5	+	FALSE	AluSz	SINE,Alu
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr3	193385047	C	T	0.00259	OPA1	+	FALSE
chr1	214524044	T	C	0.00242	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	26143725	A	T	0.00818	SEPN1	+	FALSE	AluSx	SINE,Alu
chr7	29962664	A	C	0.00077	SCRN1	-	FALSE
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr8	145139727	C	T	0.00458	GPAA1	+	FALSE
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr6	74303543	T	C	0.00031	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr17	46941448	G	T	0.00017	CALCOCO2	+	FALSE	AluSz6	SINE,Alu
chr4	9998493	A	G	5.94150E-05	SLC2A9	-	FALSE
chr1	233086456	T	C	7.28865E-05	NTPCR	+	FALSE
chr1	8877520	A	T	0.00308	RERE	-	FALSE
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr1	10520532	T	C	0.00142		.	FALSE	AluSx1	SINE,Alu
chr2	207146629	A	G	0.00434	ZDBF2	+	FALSE
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr1	10517314	T	C	0.00368		.	FALSE	AluJr	SINE,Alu
chr15	41591457	A	G	1.25234E-05	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	949608	G	A	0.00235	ISG15	+	FALSE
chr16	747231	T	G	0.00269	FBXL16	-	FALSE
chr7	6442891	G	A	0.00134	RAC1	+	FALSE
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	46076481	A	G	0.00144	NASP	+	TRUE	AluSx	SINE,Alu
chr1	45975358	A	G	0.00339	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr2	157440644	G	C	0.00394	GPD2	+	FALSE
chr1	93826775	T	C	0.00172	DR1	+	FALSE
chr1	26898378	C	A	0.00148	RPS6KA1	+	FALSE
chr2	39212567	T	G	0.00546	SOS1	-	FALSE
chr4	42091668	A	G	0.00430		.	FALSE	AluSp	SINE,Alu
chr4	44176960	T	C	0.00043	KCTD8	-	FALSE
chr4	17802819	T	C	0.00112	DCAF16	-	TRUE	AluSz	SINE,Alu
chr4	185309405	A	G	0.00035	IRF2	-	FALSE
chr1	19586455	A	G	0.00772	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	144606963	G	T	0.00965	NBPF20	+	FALSE
chr2	11053740	C	T	0.00402	KCNF1	+	FALSE
chr2	160084473	A	C	0.00101	TANC1	+	FALSE
chr15	41590287	A	G	0.00319	OIP5-AS1	+	FALSE
chr2	217366919	A	G	0.00615		.	FALSE	AluSz6	SINE,Alu
chr1	1251631	T	C	0.00256	CPSF3L	-	TRUE	AluSz	SINE,Alu
chr1	11298093	C	T	7.93954E-12	MTOR	-	FALSE
chr1	228520973	C	G	0.00875	OBSCN	+	FALSE
chr1	10518797	T	C	0.00148		.	FALSE	AluSx1	SINE,Alu
chr3	5026730	T	C	0.00488	BHLHE40	+	FALSE
chr5	125961816	A	G	0.00013	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr2	191799595	A	G	0.00162	GLS	+	FALSE
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr1	117531179	G	A	0.00116	PTGFRN	+	FALSE
chr17	263417	C	T	0.00675	LOC105371430,C17orf97	+,-	FALSE
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr16	19513719	T	A	0.00730	GDE1	-	FALSE	AluJr	SINE,Alu
chr16	10624997	T	C	1.19407E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	10520067	T	C	2.08449E-05		.	FALSE	AluSx	SINE,Alu
chr3	30733403	A	T	0.00110	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr6	3266908	G	A	0.00974	PSMG4	+	FALSE
chr12	32532505	G	A	0.00385		.	FALSE
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr1	77759578	A	G	0.00492	AK5	+	FALSE
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	198339541	C	T	0.00465	COQ10B	+	FALSE	(T)n	SINE,Alu
chr1	16892918	T	C	0.00158	NBPF1	-	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr5	130540369	C	A	0.00126	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr5	125961534	A	G	0.00233	PHAX	+	TRUE	AluSz6	SINE,Alu
chr3	124732406	C	A	0.00975	HEG1	-	FALSE
chr19	37073373	T	C	0.00492	ZNF529,ZNF529-AS1	+,-	FALSE	AluY	SINE,Alu
chr1	569874	C	T	0.00076		.	FALSE
chr1	19953129	T	A	0.00934	MINOS1,MINOS1-NBL1	+	FALSE
chr18	61565062	C	G	0.00207	SERPINB2	+	FALSE
chr2	30480670	G	T	0.00167	LBH	+	FALSE
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	156011444	T	C	0.00483	UBQLN4	-	FALSE
chr1	36067886	T	C	0.00786	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	68483513	G	A	3.54156E-05	UBA6	-	FALSE
chr4	2940091	T	C	0.00212	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr1	204526631	A	G	0.00568	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	37328008	T	C	0.00733		.	FALSE
chr4	107246251	G	T	3.16074E-09	AIMP1	+	FALSE
chr1	35649803	A	C	0.00659	SFPQ	-	FALSE
chr1	36535403	A	G	0.00320		.	FALSE	AluSx1	SINE,Alu
chr4	119555188	C	A	0.00205	LOC729218	+	FALSE
chr16	19715518	T	C	0.00502		.	FALSE	AluSg	SINE,Alu
chr16	9200168	A	T	0.00908	C16orf72	+	FALSE	AluSx1	SINE,Alu
chr1	19543465	T	C	0.00117	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	180144485	G	A	0.00665	QSOX1	+	FALSE
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr1	214529170	T	C	0.00120	PTPN14	-	TRUE
chr8	23087535	A	G	0.00491	LOC389641	+	FALSE	AluSx1	SINE,Alu
chr1	6283264	T	C	0.00287	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	220231487	T	C	0.00013	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	183112505	T	C	0.00525	LAMC1	+	FALSE
chr4	57327092	A	G	0.00091	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	180082702	G	C	0.00019	CEP350	+	FALSE
chr8	42043493	G	A	0.00045	PLAT	-	FALSE	MLT2C1	SINE,Alu
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr7	22983890	T	C	0.00097	FAM126A	-	FALSE
chr1	16909161	T	C	0.00718	NBPF1	-	FALSE
chr13	28240417	C	G	6.17934E-05	POLR1D	+	FALSE
chr1	120612194	C	G	0.00091	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	26161108	A	C	7.55238E-06	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr6	26095484	A	G	0.00231		.	FALSE	AluY	SINE,Alu
chr1	92195511	C	T	0.00681	TGFBR3	-	FALSE
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr1	1655474	G	A	0.00694	CDK11B,CDK11A	-	FALSE
chr1	19543465	T	C	0.00638	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	19542464	T	C	0.00736	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	44088568	G	A	0.00274	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	24134721	T	C	0.00448	HMGCL	-	FALSE
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr2	206986291	T	C	0.00143		.	FALSE	AluSz	SINE,Alu
chr1	19543457	T	C	0.00101	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr4	95586224	A	G	0.00053	PDLIM5	+	FALSE
chr1	26606589	C	G	0.00420	SH3BGRL3	+	FALSE

RBP	FIP1L1
Knock-Method	shRNA
RBP Family	Fip1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR116QBU
Platform	HiSeq
Pubmed ID	32252787

FIP1L1 - Target Gene Network