RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr14	19686329	G	A	0.00117	DUXAP10	+	FALSE
chr2	39212567	T	G	0.00546	SOS1	-	FALSE
chr2	128951941	A	G	0.00624	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr2	1652354	G	A	0.00114	PXDN	-	FALSE
chr5	148873854	A	G	0.00453		.	FALSE
chr1	145513031	A	G	0.00705	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	38423182	G	C	0.00664	SF3A3	-	FALSE	AluJo	SINE,Alu
chr10	71647223	A	C	0.00114	COL13A1	+	FALSE
chr1	214524576	T	C	0.00337	PTPN14	-	TRUE	AluSg	SINE,Alu
chr2	120980896	T	G	0.00132	TMEM185B	-	FALSE
chr1	153909069	G	C	5.11201E-05	DENND4B	-	FALSE
chr6	29857589	A	G	0.00280		.	FALSE
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr1	36068210	T	C	0.00119	PSMB2	-	TRUE	AluSc	SINE,Alu
chr12	120899702	T	A	0.00967	GATC,SRSF9	+,-	FALSE
chr1	33961147	T	G	0.00196	ZSCAN20	+	FALSE
chr3	45721891	A	G	0.00356	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr22	44890573	T	C	1.87764E-05	LDOC1L	-	FALSE
chr2	64859679	T	C	0.00824	SERTAD2	-	FALSE
chr12	53435627	A	G	0.00133	EIF4B	+	FALSE
chr1	45244433	G	A	0.00060		.	FALSE
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr3	8922054	T	C	0.00464	RAD18	-	FALSE
chr6	26096636	A	G	0.00531		.	FALSE	AluSg	SINE,Alu
chr6	42856954	A	G	0.00037	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr5	442075	C	A	0.00962	EXOC3-AS1	-	FALSE
chr7	64441632	A	T	0.00038	ZNF117	-	FALSE
chr1	10518591	A	T	0.00169		.	FALSE
chr6	24720533	C	G	0.00023		.	FALSE
chr1	144930940	T	C	0.00181	NBPF20,PDE4DIP	+,-	FALSE
chr17	10578246	A	G	0.00093		.	FALSE
chr1	220231276	T	C	0.00545	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr3	48787715	T	C	0.00863	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr17	79514129	G	A	0.00164	FAAP100	-	FALSE
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr16	23582262	T	G	0.00101	UBFD1	+	FALSE
chr5	64964623	T	C	1.14652E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr7	86816663	A	G	0.00103	DMTF1	+	TRUE	AluJr	SINE,Alu
chr14	24884880	T	G	0.00491	NYNRIN	+	FALSE
chr4	2940147	T	C	0.00061	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr2	135208352	T	G	0.00259	MGAT5	+	FALSE
chr1	175914284	A	G	0.00036	RFWD2	-	FALSE
chr2	61705068	A	T	0.00103		.	FALSE
chr1	24288529	T	C	0.00401	PNRC2	+	FALSE
chr1	144606838	A	G	0.00988	NBPF20	+	FALSE
chr3	58292300	C	T	0.00740	RPP14	+	FALSE
chr2	25962253	A	T	0.00784	ASXL2	-	FALSE
chr1	205686523	G	T	2.43057E-05	NUCKS1	-	FALSE
chr13	31033325	C	A	0.00792	HMGB1	-	FALSE
chr1	39470978	T	A	0.00378	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr2	207174868	G	A	1.60070E-05	ZDBF2	+	FALSE
chr2	20449605	C	T	0.00871	PUM2	-	FALSE
chr1	118068699	C	G	0.00191		.	FALSE
chr8	128944712	A	C	0.00033	PVT1	+	FALSE
chr15	64657530	T	C	0.00580	KIAA0101	-	TRUE	FLAM_C	SINE,Alu
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr9	137330711	T	A	0.00194	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr2	100019496	A	G	0.00789	REV1	-	FALSE
chr3	14986200	G	T	0.00346	FGD5-AS1	-	FALSE	AluSq2	SINE,Alu
chr1	113243048	C	T	0.00941	MOV10	+	FALSE
chr2	32533707	A	G	0.00395		.	FALSE	AluSp	SINE,Alu
chr5	139931632	C	G	0.00052	SRA1	-	FALSE
chr1	33148691	A	G	0.00032	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr7	65844062	T	A	0.00733	LINC00174	-	FALSE
chr1	1152309	A	T	0.00030	SDF4	-	FALSE
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr2	233744021	G	A	0.00460	NGEF	-	FALSE
chr1	46830447	A	C	0.00168	NSUN4	+	FALSE	LTR108a_Mam	SINE,Alu
chr5	43298557	C	T	0.00643	HMGCS1	-	FALSE
chr1	144595935	G	A	0.00837	NBPF20	+	FALSE	AluJb	SINE,Alu
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	61922437	G	T	0.00359	NFIA	+	FALSE
chr8	145159709	C	A	0.00314	MAF1	+	FALSE
chr1	27992824	G	A	0.00025	IFI6	-	FALSE
chr1	155144757	T	C	0.00758	KRTCAP2	-	FALSE	Tigger19b	SINE,Alu
chr13	41635234	T	C	0.00395		.	FALSE
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	97144886	A	G	0.00078		.	FALSE
chr2	131104524	G	A	0.00912	IMP4	+	FALSE	L1MA9	SINE,Alu
chr2	86252222	T	C	0.00468	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	19586501	A	G	0.00288	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	117532790	C	T	0.00981	PTGFRN	+	FALSE
chr1	154554951	A	G	0.00554	ADAR	-	FALSE
chr1	120839682	A	G	0.00764	FAM72B	+	FALSE
chr1	24798089	G	A	0.00815	NIPAL3	+	FALSE
chr1	145283980	C	T	0.00113	NBPF20,NOTCH2NL	+	FALSE
chr1	1549354	G	A	0.00132		.	FALSE	HAL1	SINE,Alu
chr1	110564996	C	T	0.00926	AHCYL1	+	FALSE
chr1	180144485	G	A	0.00665	QSOX1	+	FALSE
chr1	11785182	A	G	0.00262		.	FALSE	AluJr	SINE,Alu
chr1	179070187	G	A	0.00556	ABL2	-	FALSE
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr2	239970718	C	A	0.00244	HDAC4	-	FALSE	(AAAAC)n	SINE,Alu
chr1	10517512	T	C	0.00514		.	FALSE	AluSx1	SINE,Alu
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr17	57279264	A	G	0.00793	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	33148216	A	G	0.00824	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	143189473	C	A	0.00626	LOC102723769	-	FALSE
chr7	143003525	T	A	0.00064	CASP2	+	FALSE	AluY	SINE,Alu
chr1	172411768	T	C	0.00416	C1orf105,PIGC	+,-	FALSE
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr1	28929961	T	A	0.00068	TAF12	-	FALSE
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chrX	123046741	A	G	0.00169	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	53288897	A	G	0.00439	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	235612219	T	A	0.00148	TBCE,B3GALNT2	+,-	FALSE
chr15	59428230	G	A	0.00891	MYO1E	-	FALSE	MLT1B	SINE,Alu
chr11	31452750	A	G	0.00326	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr5	140751128	C	G	0.00647	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3	+	FALSE
chr1	109818270	C	T	0.00996	CELSR2	+	FALSE
chr15	91044379	T	G	0.00440	IQGAP1	+	FALSE
chr10	101563815	G	A	0.00218	ABCC2	+	FALSE
chr14	24661020	C	T	0.00504	TM9SF1	-	FALSE	AluJb	SINE,Alu
chr1	206635244	T	A	0.00188	SRGAP2	+	FALSE
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr1	144874815	T	C	0.00701	NBPF20,PDE4DIP	+,-	FALSE
chr3	14986111	T	C	0.00653	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr1	36068237	T	C	0.00291	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	42591956	G	A	0.00030	SEC22C	-	FALSE
chr2	86251151	T	C	0.00882		.	FALSE	AluSx	SINE,Alu
chr1	10520258	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr10	65382718	G	A	0.00984	REEP3	+	FALSE	AluSc	SINE,Alu
chr6	74346347	A	G	4.16931E-07	SLC17A5	-	FALSE
chr1	1498747	T	C	0.00847	SSU72	-	TRUE	AluSg7	SINE,Alu
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	71214819	A	T	0.00346	TEX261	-	FALSE
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr1	114306374	G	A	5.13313E-06	RSBN1	-	FALSE
chr1	16902943	T	C	0.00833	NBPF1	-	FALSE
chr7	17384354	A	G	0.00282	AHR	+	TRUE	AluSx	SINE,Alu
chr3	52800284	T	C	6.08396E-05	NEK4	-	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr1	171561203	T	G	0.00119	PRRC2C	+	FALSE
chr10	89004545	T	C	0.00057	NUTM2A-AS1	-	FALSE	MSTA	SINE,Alu
chr1	3729217	T	C	0.00119	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	3731959	C	T	0.00089	CEP104	-	FALSE
chr1	28833494	G	A	0.00122	SNHG3,RCC1	+	FALSE
chr1	231557255	C	G	0.00056	EGLN1	-	FALSE	(GCC)n	SINE,Alu
chr1	142688506	T	C	0.00337		.	FALSE
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr3	40503562	G	A	0.00017	RPL14	+	FALSE
chr3	189675270	T	G	0.00039	P3H2	-	FALSE
chr1	145511962	A	G	0.00187	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	28662199	A	G	0.00138	MED18	+	TRUE	AluSq2	SINE,Alu
chr5	125961667	A	G	1.34346E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	117945049	G	A	0.00120	MAN1A2	+	FALSE
chr1	46164493	T	C	0.00325	IPP	-	TRUE	AluJb	SINE,Alu
chr9	132266644	A	G	0.00081	LINC00963	+	TRUE	AluSx	SINE,Alu
chr2	37333930	T	C	0.00073	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	16889127	A	G	0.00213	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	10519148	T	C	0.00611		.	FALSE	AluSx3	SINE,Alu
chr1	65297860	A	T	0.00847	RAVER2	+	FALSE
chr1	228880135	C	T	0.00026	RHOU	+	FALSE
chr1	179327010	A	G	0.00085	SOAT1	+	TRUE
chr1	145512151	C	A	0.00723	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	153483048	G	A	0.00740	FMNL2	+	FALSE
chr2	17962998	T	A	0.01000	GEN1	+	FALSE
chr6	149912307	A	G	0.00026		.	FALSE	AluSc	SINE,Alu
chr2	206987096	T	C	0.00795		.	FALSE	AluSx	SINE,Alu
chr6	31595882	C	A	0.00450		.	FALSE
chr1	53680205	C	T	9.80404E-07	C1orf123	-	FALSE
chr1	150337289	G	T	0.00020	RPRD2	+	FALSE
chr7	6501830	G	A	0.00217	KDELR2	-	FALSE
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr3	188603007	C	G	0.00785	LPP	+	FALSE
chr1	226333556	C	A	0.00250	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	762109	C	T	0.00026	LINC00115	-	FALSE
chr1	10520588	T	C	0.00341		.	FALSE	AluSc8	SINE,Alu
chr19	19745479	C	T	0.00175	GMIP	-	FALSE
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr1	33240842	C	T	0.00446	YARS	-	FALSE
chr1	32637063	C	T	0.00071	KPNA6	+	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	87200770	C	T	0.00623	SH3GLB1	+	FALSE
chr1	43917637	G	A	0.00164	SZT2,HYI	+,-	FALSE
chr1	244869241	C	A	0.00213	DESI2	+	FALSE
chr11	16771525	T	C	0.00014	C11orf58	+	FALSE
chr1	151778899	T	C	0.00475	RORC	-	FALSE
chr3	39450156	A	G	0.00985	RPSA	+	FALSE
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr17	37006249	T	C	0.00774		.	FALSE	AluSx	SINE,Alu
chr12	72096206	A	G	2.06003E-07	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	146650363	T	A	0.00982	PDIA3P1	+	FALSE
chr1	32374019	G	A	0.00297	PTP4A2	-	FALSE
chr5	34908535	T	C	0.00054	RAD1	-	FALSE	AluSp	SINE,Alu
chr16	10623639	T	C	0.00392	EMP2	-	TRUE	AluSp	SINE,Alu
chr4	160279820	C	T	0.00354	RAPGEF2	+	FALSE
chr13	52952575	G	A	0.00030	THSD1	-	FALSE
chr1	24296856	T	G	0.00564		.	FALSE	AluSg	SINE,Alu
chr6	52442880	G	T	5.05556E-08	TRAM2-AS1	+	FALSE
chr1	117531621	A	G	0.00577	PTGFRN	+	FALSE
chr1	10517567	T	C	0.00262		.	FALSE	AluSx1	SINE,Alu
chr6	13788342	T	C	0.00048	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	54691922	T	A	0.00067	SSBP3	-	FALSE
chr1	6583097	T	C	0.00022	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr15	41593308	A	G	0.00619		.	FALSE	AluSz6	SINE,Alu
chr2	37327670	T	C	0.00021		.	FALSE
chr4	103715820	A	C	0.00652	LOC102723704,UBE2D3	+,-	FALSE	(A)n	SINE,Alu
chr1	46075663	A	G	0.00013	NASP	+	TRUE	AluSx4	SINE,Alu
chr16	10626630	T	C	0.00051	EMP2	-	FALSE	(T)n	SINE,Alu
chr1	31351513	G	A	0.00265	SDC3	-	FALSE
chr1	52306066	T	A	0.00154	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	32535287	A	G	0.00891		.	FALSE	FLAM_C	SINE,Alu
chr1	38326547	C	T	0.00212	INPP5B	-	FALSE	AluJr	SINE,Alu
chr1	53679610	G	A	0.00073	CPT2	+	FALSE	AluSz	SINE,Alu
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	168214098	T	G	0.00134		.	FALSE
chr6	44417835	A	G	8.27091E-07	CDC5L	+	TRUE	AluSx	SINE,Alu
chr11	118965479	G	A	0.00682	H2AFX	-	FALSE	G-rich	SINE,Alu
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr1	1717439	T	A	0.00663	GNB1	-	FALSE
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr1	10517527	T	C	0.00453		.	FALSE	AluSx1	SINE,Alu
chr3	58112440	A	G	8.00661E-07	FLNB	+	FALSE
chr1	3730400	T	C	0.00584	CEP104	-	TRUE	AluSx3	SINE,Alu
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr9	9442082	T	G	0.00052	PTPRD	-	FALSE	7SLRNA	SINE,Alu
chr5	132232315	G	A	0.00573	AFF4	-	FALSE
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr7	30616247	T	C	0.00887	LOC401320	-	FALSE	THE1B	SINE,Alu
chr1	109475572	A	G	0.00096	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	11159823	T	C	0.00186	EXOSC10,LOC105376736	+,-	FALSE
chr2	191224981	G	T	0.00676	INPP1	+	FALSE
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr1	20945055	C	T	0.00542	CDA	+	FALSE
chr7	924639	A	G	0.00285	GET4	+	TRUE	AluJb	SINE,Alu
chr1	144931727	G	A	0.00521	NBPF20,PDE4DIP	+,-	FALSE
chr1	109513497	C	T	0.00186	WDR47	-	FALSE
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr15	28502279	A	G	0.00120	HERC2	-	FALSE
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	153700841	A	G	0.00508	INTS3	+	FALSE
chr2	10586903	A	C	0.00041	ODC1,SNORA80B	-	FALSE
chr12	98942840	A	G	0.00031	TMPO	+	FALSE	AluSc	SINE,Alu
chr1	46075715	A	G	0.00401	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	1650797	A	G	0.00798	CDK11B,CDK11A	-	FALSE
chr16	81064611	A	G	0.00075	CENPN	+	TRUE	AluSg	SINE,Alu
chr4	247533	A	G	0.00972	ZNF876P	+	FALSE
chr12	133298255	A	G	0.00016	PGAM5	+	TRUE	AluSp	SINE,Alu
chr12	80168993	G	T	0.00513	PPP1R12A	-	FALSE
chr11	769459	T	C	0.00082	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr3	10302056	A	G	0.00018	TATDN2	+	FALSE
chr3	179117128	T	C	0.00239	GNB4	-	TRUE	AluSz	SINE,Alu
chr9	19376248	A	T	0.00821		.	FALSE
chr2	206987136	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr1	24865333	A	G	0.00087		.	FALSE	FLAM_A	SINE,Alu
chr1	6582868	T	C	0.00368	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr17	48155425	G	A	0.00603	ITGA3	+	FALSE
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	156495520	T	A	0.00048	IQGAP3	-	FALSE
chr1	16890320	T	C	0.00045	NBPF1	-	FALSE
chr1	19542401	T	C	0.00077	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	155851620	A	G	6.99218E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	93298516	A	G	0.00493	FAM69A,RPL5	+,-	FALSE
chr1	20975992	T	C	2.78350E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr3	88191444	A	C	0.00020	CGGBP1,ZNF654	+,-	FALSE
chr1	1419775	A	G	0.00090	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	46077218	A	G	0.00783	NASP	+	TRUE	AluSc8	SINE,Alu
chr2	37075013	T	A	0.00754	STRN	-	FALSE
chr21	34729931	A	G	0.00040	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr2	96918126	G	T	0.00821	TMEM127	-	FALSE
chr3	48787118	T	C	0.00359	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr19	9672979	T	C	0.00028		.	FALSE	AluSx3	SINE,Alu
chr1	31837516	G	C	5.10721E-05	ZCCHC17	+	FALSE
chr1	31192650	T	G	0.00727	MATN1,MATN1-AS1	+,-	FALSE
chr1	100655177	G	A	0.00923	DBT	-	FALSE
chr2	55516936	A	T	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr8	128944719	A	T	0.00093	PVT1	+	FALSE
chr2	30381505	T	C	0.00820	YPEL5	+	FALSE
chr3	49453834	C	T	0.00518	TCTA	+	FALSE
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr5	37290504	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr2	27001973	C	T	0.00327	SLC35F6	+	FALSE	AluSx	SINE,Alu
chr9	136209399	A	T	0.00011	MED22	-	FALSE
chr21	34728068	A	G	0.00188	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr7	143003524	G	T	3.66232E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr17	28575454	A	C	0.00470	BLMH	-	FALSE
chr1	53289759	A	G	0.00060	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr2	74332840	G	C	4.77205E-06	TET3	+	FALSE
chr1	38423055	C	A	0.00015	SF3A3	-	FALSE
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	127826533	A	G	0.00942	BIN1	-	FALSE
chr5	140720886	A	G	0.00980	PCDHGA1,PCDHGA2	+	FALSE
chr3	37407770	G	T	0.00530	GOLGA4	+	FALSE
chr19	9673274	T	C	0.00018		.	FALSE	Tigger1	SINE,Alu
chr2	85773689	T	C	0.00104	GGCX	-	TRUE	AluSx1	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr7	6500726	A	T	0.00560	KDELR2	-	FALSE
chr4	248840	A	G	0.00655	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr1	7737792	C	G	8.96820E-06	CAMTA1	+	FALSE
chr2	61152521	G	A	0.00134	REL	+	FALSE
chr10	62554474	T	G	6.65730E-05	CDK1	+	FALSE
chr1	569782	T	C	0.00010		.	FALSE
chr3	170021211	A	C	3.61705E-05	PRKCI	+	FALSE
chr2	238463408	C	G	0.00644	MLPH	+	FALSE
chr1	33148282	A	G	0.00825	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr2	234203547	T	C	0.00476	ATG16L1	+	FALSE
chr2	86252025	T	C	3.86923E-05	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr6	160526905	C	A	0.00268	IGF2R	+	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr18	7012123	A	G	0.00065	LAMA1	-	FALSE
chr7	100957852	T	C	1.09184E-06	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr8	25317824	A	T	0.00017	CDCA2	+	FALSE
chr16	81064534	A	G	0.00480	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	33149443	A	G	2.90388E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr7	6064009	C	G	0.00273	EIF2AK1	-	FALSE
chr9	135172412	A	G	0.00394	SETX	-	FALSE
chr1	24933701	A	G	0.00372	NCMAP	+	TRUE	AluJr	SINE,Alu
chr2	36704034	A	G	9.89157E-05	CRIM1	+	FALSE
chr2	132275343	G	T	0.00334	LOC150776	+	FALSE
chr1	179042905	A	G	0.00972	FAM20B	+	TRUE
chr14	50713578	T	C	0.00260	L2HGDH	-	TRUE	AluSx	SINE,Alu
chr1	16910172	G	A	0.00085	NBPF1	-	FALSE
chr1	229586611	T	C	0.00794	NUP133	-	TRUE	AluSz	SINE,Alu
chr1	145512073	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr5	150647719	T	C	0.00112	GM2A	+	FALSE	AluSc	SINE,Alu
chr17	28506279	G	A	0.00634	NSRP1	+	FALSE
chr17	45761109	T	G	0.00018		.	FALSE
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr1	109239943	C	T	0.00722	PRPF38B	+	FALSE
chr1	1653046	T	A	0.00217	CDK11B,CDK11A	-	FALSE
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr3	48485493	A	G	7.09932E-12	TMA7	+	FALSE
chr1	119693495	A	G	0.00996	LOC101929147	+	TRUE	AluSx	SINE,Alu
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr1	145442111	C	A	0.00090	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	27205044	T	C	0.00312		.	FALSE	AluSx	SINE,Alu
chr3	48786991	T	C	0.00584	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	28835934	A	G	3.31538E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	6279950	A	G	0.00541	RNF207	+	TRUE	AluSp	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr2	37327676	T	C	0.00462		.	FALSE
chr3	196079305	T	C	0.00161		.	FALSE	AluSx	SINE,Alu
chr19	7084638	A	G	0.00024	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	16945570	A	G	0.00131	CROCCP2	-	FALSE
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr9	124095000	T	G	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr6	71298639	A	G	0.00339		.	FALSE	AluSp	SINE,Alu
chr3	44791062	T	C	0.00014	KIAA1143	-	FALSE
chr1	68167935	A	G	0.00390	GNG12	-	FALSE
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr3	14183410	T	C	1.62266E-06	TMEM43	+	FALSE
chr11	65179818	C	T	0.00799	FRMD8	+	FALSE
chr7	64435678	T	A	0.00256	ZNF117	-	FALSE
chr1	74672474	G	A	0.00441	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr2	191067766	T	C	0.00034	C2orf88	+	FALSE
chr1	1252221	T	C	0.00186	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr15	63356574	G	A	0.00845	TPM1	+	FALSE
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr3	195243006	C	A	0.00982	PPP1R2	-	FALSE
chr1	33148698	A	G	0.00736	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr19	53914411	A	G	8.16883E-05	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr1	45975498	A	G	0.00064	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr7	102016321	C	T	0.00201	LOC100289561,LOC100630923	+	FALSE
chr2	37331627	T	C	0.00030		.	FALSE	AluJb	SINE,Alu
chr3	195451488	C	T	1.73907E-06	MUC20	+	FALSE
chr1	16944953	T	G	0.00158	CROCCP2	-	FALSE
chr1	33148691	A	G	0.00117	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	10517635	T	C	0.00523		.	FALSE	AluSx1	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr2	91805928	T	C	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr11	8707908	A	G	0.00262	RPL27A	+	TRUE	AluSx1	SINE,Alu
chr5	40832557	G	T	5.89786E-05	RPL37	-	FALSE
chr1	179326847	A	G	0.00021	SOAT1	+	TRUE	AluJo	SINE,Alu
chr8	99053985	T	G	4.76792E-05	RPL30	-	FALSE
chr1	87328401	A	T	0.00946	SEP15	-	FALSE
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	55224131	T	C	0.00169	PARS2	-	FALSE
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr9	139417333	G	A	0.00463	NOTCH1	-	FALSE
chr1	19586455	A	G	3.44081E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr5	43290210	A	G	0.00565	HMGCS1	-	FALSE	A-rich	SINE,Alu
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	9664845	C	T	1.14015E-08	TMEM201	+	FALSE
chr4	56236480	T	A	0.00967	SRD5A3,SRD5A3-AS1	+,-	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	198416734	A	T	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr14	68144079	G	T	0.00974	RDH11	-	FALSE
chr5	93018884	A	C	0.00030	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	237065583	G	T	0.00959	MTR	+	FALSE
chr12	96661616	A	G	0.00057	ELK3	+	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr1	11979807	C	A	0.00574	KIAA2013	-	FALSE
chr10	60047609	A	G	0.00979	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	182543666	T	G	0.00124	RNASEL	-	FALSE
chr1	45110404	C	T	0.00230	RNF220	+	FALSE
chr1	93307479	C	A	0.00085	FAM69A,RPL5	+,-	FALSE
chr1	26801736	A	T	0.00578	HMGN2	+	FALSE	(T)n	SINE,Alu
chr2	37329352	T	C	0.00403		.	FALSE	AluJr4	SINE,Alu
chr1	113248365	A	G	0.00252	RHOC	-	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	10042987	A	G	0.00199	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	242251696	C	T	0.00335	PLD5	-	FALSE
chr1	28836872	A	G	0.00019	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	117618067	C	T	0.00118	TTF2	+	FALSE
chr4	119952955	C	T	0.00278	SYNPO2	+	FALSE
chr2	174090336	A	C	0.00331	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr7	65992665	T	C	2.17687E-05		.	FALSE	AluJr	SINE,Alu
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr5	10655842	C	T	0.00024	ANKRD33B	+	FALSE
chr1	16893721	A	C	0.00043	NBPF1	-	FALSE
chr1	144481235	A	G	1.18230E-05	NBPF20	+	FALSE
chr1	14150116	C	T	7.82303E-05	PRDM2	+	FALSE
chr3	32567573	G	A	0.00320	DYNC1LI1	-	FALSE	(AT)n	SINE,Alu
chr14	23794554	G	A	0.00966	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chrX	3523061	C	G	0.00023	PRKX	-	FALSE	(AC)n	SINE,Alu
chr1	16890176	A	C	0.00753	NBPF1	-	FALSE
chr1	53712569	C	A	0.00061	LRP8	-	FALSE	(CA)n	SINE,Alu
chr1	148252049	A	C	0.00666	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	87328396	A	T	0.00148	SEP15	-	FALSE
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr2	114356360	G	A	0.00520	WASH2P	+	FALSE
chr1	201860626	A	G	0.00599	SHISA4	+	FALSE
chr3	56703746	A	C	0.00027	FAM208A	-	FALSE
chr19	58375195	A	G	0.00080	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr1	19542401	T	C	0.00071	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr15	91044380	G	C	0.00453	IQGAP1	+	FALSE
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr1	16203172	A	G	8.98827E-07	SPEN	+	FALSE
chr17	74555106	T	C	0.00164	SNHG16	+	FALSE
chr2	202031356	C	T	0.00247	CFLAR	+	FALSE	SVA_A	SINE,Alu

RBP	PUM2
Knock-Method	shRNA
RBP Family	PUF
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR118XYK
Platform	HiSeq
Pubmed ID	32252787

PUM2 - Target Gene Network