RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	154440548	G	T	0.00123	IL6R	+	FALSE	(TTGTT)n	SINE,Alu
chr10	124815149	C	G	0.00993	ACADSB	+	FALSE	THE1A-int	SINE,Alu
chr12	125269489	C	T	0.00817	SCARB1	-	FALSE
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr2	135208354	A	T	0.00249	MGAT5	+	FALSE
chr1	45975345	A	G	0.00120	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	198572083	T	A	0.00272	MARS2	+	FALSE
chr1	36390527	A	G	0.00065		.	FALSE	L2c	SINE,Alu
chr12	72096206	A	G	2.06003E-07	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr2	85621889	C	T	0.00366	CAPG	-	FALSE
chr19	24104040	A	G	0.00476	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr1	3546132	G	A	0.00113	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr2	10586899	G	A	0.00312	ODC1,SNORA80B	-	FALSE
chr7	20177664	T	C	0.00089	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr4	10443059	A	T	0.00187	ZNF518B	-	FALSE
chr1	10518688	T	C	0.00341		.	FALSE	AluSx1	SINE,Alu
chr20	35520976	T	C	0.00254	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr1	38326643	T	C	0.00458	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr12	993930	C	T	0.00163	WNK1	+	FALSE
chr7	38763068	T	C	0.00361		.	FALSE	AluSx3	SINE,Alu
chr5	175934037	C	A	0.00182	FAF2	+	FALSE	A-rich	SINE,Alu
chr1	949472	G	A	2.93477E-10	ISG15	+	FALSE
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr1	9160963	T	C	0.00130		.	FALSE	AluJb	SINE,Alu
chr1	33149260	A	G	0.00143	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	89447839	C	G	3.35704E-05	KYAT3,RBMXL1	-	FALSE
chr3	12624321	A	G	2.86985E-06	MKRN2	+	FALSE
chr5	131715011	A	G	0.00761	SLC22A5	+	FALSE
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr12	6840209	G	A	0.00820	COPS7A	+	FALSE
chr1	225156655	C	T	0.00671	DNAH14	+	FALSE
chr5	176916516	C	T	0.00093	PDLIM7	-	FALSE
chr1	144828784	A	G	0.00053	NBPF20,NBPF9	+	FALSE
chr11	68523337	T	C	0.00016	CPT1A	-	TRUE	AluSq	SINE,Alu
chr3	66430375	T	A	0.00091	LRIG1	-	FALSE
chr1	144521102	T	A	0.00119	NBPF20	+	FALSE
chr2	37328042	T	C	6.80414E-06		.	FALSE
chr1	148003730	T	C	0.00415	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr4	2940347	T	C	1.36349E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	225706943	C	T	0.00229	ENAH	-	FALSE
chr1	10517688	T	C	0.00179		.	FALSE	AluSx1	SINE,Alu
chr3	148748380	T	C	0.00240	HLTF	-	FALSE
chr3	14986111	T	C	0.00653	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr15	90819619	A	G	5.14004E-06		.	FALSE	AluSx	SINE,Alu
chr14	88933002	C	G	0.00459	PTPN21	-	FALSE
chr2	9629306	G	T	0.00255	ADAM17	-	FALSE
chr5	125961623	A	G	4.58304E-06	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	1252723	T	C	0.00367	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr4	68483513	G	A	3.54156E-05	UBA6	-	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr9	140729536	C	A	0.00699	EHMT1	+	FALSE
chr3	195694454	C	T	0.00092	SDHAP1	-	FALSE
chr5	37290504	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr4	101947014	G	C	0.00140	PPP3CA	-	FALSE
chr4	165998078	T	C	0.00567	TMEM192	-	TRUE	AluSx	SINE,Alu
chr17	57279167	A	G	0.00071	PRR11	+	TRUE	AluSq2	SINE,Alu
chr5	32404176	C	T	0.00342	ZFR	-	FALSE
chr1	168212509	A	G	0.00765		.	FALSE
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr1	145511993	A	G	0.00088	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	31905887	A	C	0.00245	SERINC2	+	FALSE
chr1	89447715	T	G	0.00021	KYAT3,RBMXL1	-	FALSE
chr14	75202402	A	G	0.00141	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	76672504	A	G	0.00010		.	FALSE	7SK	SINE,Alu
chr1	33149399	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	145281408	C	T	0.00087	NBPF20,NOTCH2NL	+	FALSE
chr1	45280109	A	G	0.00251		.	FALSE	AluYk3	SINE,Alu
chr5	137754695	T	C	0.00266	KDM3B	+	FALSE
chr6	170887693	G	C	0.00045	PDCD2	-	FALSE
chr9	17829	G	A	0.00142	WASH1	-	FALSE
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr1	214524576	T	C	0.00060	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	15899630	T	C	0.00082	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	204525669	A	G	0.00169	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	46269493	G	C	0.00233	MAST2	+	FALSE
chr1	16929100	C	T	0.00249	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	151288172	G	A	0.00312	PI4KB	-	FALSE
chr1	114515903	C	T	0.00169	HIPK1	+	FALSE
chr3	45266555	T	C	1.22536E-07	TMEM158	-	FALSE
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr1	145512059	A	G	0.00053	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr13	21547673	G	A	0.00974	LATS2	-	FALSE	(TG)n	SINE,Alu
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr3	194373833	G	A	0.00217	LSG1	-	FALSE
chr4	190878580	A	G	0.00052	FRG1	+	FALSE
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr1	36602178	A	T	0.00764	TRAPPC3	-	FALSE
chr6	150047420	T	C	2.23465E-06	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	11089835	A	G	0.00065	MASP2	-	FALSE	AluSp	SINE,Alu
chr2	114352238	G	A	8.42668E-06	WASH2P	+	FALSE
chr14	75202834	A	G	7.36085E-05	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	32801694	A	C	0.00847	MARCKSL1	-	FALSE
chr22	21304408	A	G	0.00967	CRKL	+	FALSE
chr4	128756737	A	G	8.66859E-06		.	FALSE	AluSx	SINE,Alu
chr5	149781426	A	G	0.00977	CD74	-	FALSE
chr1	156564726	T	C	0.00995	GPATCH4	-	FALSE
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr1	44072018	C	T	0.00783	PTPRF	+	FALSE
chr1	10521172	T	C	0.00244	DFFA	-	TRUE	AluY	SINE,Alu
chr1	19238562	G	A	3.36880E-06	IFFO2	-	FALSE
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr2	206986233	T	C	0.00545		.	FALSE	AluSz	SINE,Alu
chr2	37327666	T	C	3.66834E-09		.	FALSE
chr1	156206121	G	A	0.00423	PMF1-BGLAP,PMF1	+	FALSE
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr7	17384880	A	G	0.00027	AHR	+	TRUE	AluSc	SINE,Alu
chr5	128430757	T	C	0.00338	ISOC1	+	FALSE
chr4	160280309	G	T	0.00770	RAPGEF2	+	FALSE	(T)n	SINE,Alu
chr7	6501819	A	T	0.00037	KDELR2	-	FALSE
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr1	3729217	T	C	0.00119	CEP104	-	TRUE	AluSx3	SINE,Alu
chr3	160969268	C	T	0.00835	NMD3	+	FALSE
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr1	10520296	T	C	0.00299		.	FALSE	AluSx	SINE,Alu
chr3	194361768	C	T	1.49766E-06	LSG1	-	FALSE	MSTA	SINE,Alu
chr7	924602	A	G	0.00195	GET4	+	TRUE	AluJb	SINE,Alu
chr1	10707812	G	A	0.00818	CASZ1	-	FALSE
chr1	10042987	A	G	0.00261	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr14	75202512	A	G	0.00053	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	179044206	A	G	0.00015	FAM20B	+	TRUE	AluSx	SINE,Alu
chr19	46053370	T	C	0.00045	OPA3	-	TRUE	AluSx1	SINE,Alu
chr8	145159709	C	A	0.00314	MAF1	+	FALSE
chr8	128752685	G	A	2.94991E-09	MYC	+	FALSE
chr16	58554149	A	G	0.00302	CNOT1,SETD6	+,-	FALSE
chr2	217366919	A	G	0.00197		.	FALSE	AluSz6	SINE,Alu
chr1	45975673	A	G	0.00242	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr11	4159457	A	G	0.00764	RRM1	+	FALSE
chr5	125961647	A	G	1.53189E-07	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	109513497	C	T	0.00186	WDR47	-	FALSE
chr15	91044383	G	T	0.00440	IQGAP1	+	FALSE
chr1	3546137	A	C	0.00778	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr5	44826677	G	T	0.00941		.	FALSE	(T)n	SINE,Alu
chr2	85772404	C	A	0.00015	GGCX	-	FALSE
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr1	145283733	A	G	0.00458	NBPF20,NOTCH2NL	+	FALSE
chr1	93617404	T	G	0.00265	TMED5	-	FALSE
chr1	114443618	A	G	0.00910	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr3	196660052	G	A	0.00200	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	19934839	A	G	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	85278665	A	G	0.00242		.	FALSE
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr15	91044382	A	G	0.00453	IQGAP1	+	FALSE
chr1	55207986	T	A	0.00872	MROH7-TTC4,TTC4	+	FALSE
chr1	28567501	A	G	0.00887		.	FALSE
chr1	70718276	G	T	0.00493		.	FALSE
chr1	11084104	G	A	0.00116	TARDBP	+	FALSE
chr2	64069566	A	G	0.00075	UGP2	+	FALSE
chr1	179829508	T	C	0.00048	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	36386884	C	T	0.00375	AGO1	+	FALSE
chr4	17803578	T	C	0.00712	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	152186699	T	A	0.00891	HRNR	-	FALSE
chr20	25428294	A	G	1.11452E-05	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	45244421	G	A	0.00925		.	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr2	37328013	T	C	0.00401		.	FALSE
chr3	88103602	C	A	0.00284	CGGBP1	-	FALSE
chr1	168218522	A	G	0.00073		.	FALSE	AluSz	SINE,Alu
chr1	27248275	C	T	0.00047	NUDC	+	FALSE
chr1	33148621	A	G	0.00754	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr16	10624957	T	C	0.00034	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	67874540	T	C	0.00555	SERBP1	-	FALSE
chr1	1344893	A	G	7.94078E-08		.	FALSE	AluSg	SINE,Alu
chr5	133956668	G	A	0.00419	SAR1B	-	FALSE
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr19	33882222	G	A	0.00236	PEPD	-	FALSE
chr5	135515156	G	A	0.00364	SMAD5	+	FALSE
chr3	30733403	A	T	0.00110	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr11	68523016	T	C	0.00016	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	9160900	T	C	0.00893		.	FALSE	AluJb	SINE,Alu
chr2	28002602	C	A	0.00037	MRPL33	+	FALSE
chr7	128144035	A	G	0.00054		.	FALSE	AluSq2	SINE,Alu
chr1	46159823	T	A	0.00461	TMEM69	+	FALSE
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr16	10624997	T	C	1.19407E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr3	124732406	C	A	0.00975	HEG1	-	FALSE
chr9	132266644	A	G	0.00081	LINC00963	+	TRUE	AluSx	SINE,Alu
chr1	39924765	C	A	0.00303	MACF1	+	FALSE
chr3	30735330	G	T	0.00401	TGFBR2	+	FALSE
chr2	10908893	A	G	0.00087	ATP6V1C2	+	FALSE
chr9	140174976	G	T	0.00045	TOR4A	+	FALSE
chr1	990280	C	T	0.00243	AGRN	+	FALSE
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr2	70506337	T	C	0.00313	PCYOX1	+	FALSE
chr1	36067784	T	C	0.00083	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	20976843	G	C	0.00202	PINK1,PINK1-AS	+,-	FALSE
chr7	65844562	T	C	0.00695	LINC00174	-	FALSE
chr19	19792444	A	G	0.00686	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr3	45960557	C	T	1.72644E-06	FYCO1	-	FALSE
chr2	99812398	A	G	0.00019	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	22352040	G	T	0.00255	LOC101928043,LINC00339	+,-	FALSE
chr1	22853141	G	A	0.00060	ZBTB40	+	FALSE
chr1	145500919	C	T	0.00029	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	114940216	T	G	0.00074	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	152882287	C	T	0.00774	RAP2B	+	FALSE
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	69154081	G	A	0.00999	ARL6IP5	+	FALSE
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr3	125248838	A	T	0.00899	OSBPL11	-	FALSE
chr8	26435508	C	T	0.00106	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr1	21545088	T	C	0.00737	ECE1	-	FALSE	AluSx1	SINE,Alu
chr2	102484490	G	T	0.00635	MAP4K4	+	FALSE
chr6	13790931	T	C	0.00122	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	43391823	C	T	0.00718	SLC2A1	-	FALSE
chr1	16928622	C	A	0.00197	NBPF1	-	FALSE
chr17	25640295	T	A	0.00154	WSB1	+	FALSE
chr1	145369709	A	G	0.00073	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr5	125962175	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	116234313	A	G	0.00016	VANGL1	+	FALSE
chr7	55433880	G	C	0.00115	LANCL2	+	FALSE
chr3	107765392	G	A	0.00038	CD47	-	FALSE
chr1	36068325	T	C	0.00746	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	37331038	T	C	0.00261		.	FALSE	AluSx1	SINE,Alu
chr1	16933110	T	C	0.00143	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	155829140	C	G	0.00889	GON4L	-	FALSE
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr1	148753279	G	T	0.00358		.	FALSE
chr2	37327685	T	C	0.00057		.	FALSE
chr1	36386884	C	T	0.00024	AGO1	+	FALSE
chr1	23408939	T	A	1.04314E-06	KDM1A	+	FALSE
chr1	10517691	T	C	0.00558		.	FALSE	AluSx1	SINE,Alu
chr6	74134008	T	C	0.00337		.	FALSE	AluY	SINE,Alu
chr12	121772025	T	C	0.00562	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	179055020	C	T	0.00738	TOR3A	+	FALSE
chr1	28825418	A	G	0.00961	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr1	45976262	A	C	0.00010	MMACHC	+	FALSE
chr1	220231347	T	C	2.85871E-07	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr1	17739586	G	A	0.00093	RCC2	-	FALSE
chr2	128952015	A	G	0.00086	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	16929327	C	T	5.08143E-05	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr4	71682341	T	C	0.00584	GRSF1	-	TRUE	AluSz6	SINE,Alu
chr4	39289308	G	C	0.00509	RFC1	-	FALSE
chr19	19791276	A	G	0.00069	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	203766872	G	A	1.42518E-06	ZC3H11A,ZBED6	+	FALSE
chr4	120219638	A	T	0.00970	C4orf3	-	FALSE
chr1	55207988	G	A	0.00914	MROH7-TTC4,TTC4	+	FALSE
chr1	32479707	G	A	0.00000	KHDRBS1	+	FALSE
chr1	231154918	G	T	0.00022	FAM89A	-	FALSE	(T)n	SINE,Alu
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr2	32535568	A	G	0.00016		.	FALSE	MER8	SINE,Alu
chr2	31557839	G	T	0.00145	XDH	-	FALSE	AluJr	SINE,Alu
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr4	57326291	A	G	0.00415	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	145688682	A	C	0.00468	NBPF20,NBPF10,RNF115	+	FALSE
chr2	204301757	C	T	0.00999	RAPH1	-	FALSE
chrX	24095285	A	G	0.00135	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr1	87811103	T	G	0.00028	LMO4	+	FALSE
chr1	39305021	G	T	0.00027	RRAGC	-	FALSE
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr1	12040479	T	C	0.00505	MFN2	+	FALSE
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	244572645	T	G	0.00218	ADSS	-	FALSE
chr7	143003524	G	T	3.66232E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr13	39598616	G	A	2.18804E-06	PROSER1	-	FALSE
chr1	17199309	G	A	0.00398	LOC440570	+	FALSE
chr1	100676277	A	G	0.00135	DBT	-	FALSE
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr12	98942643	A	G	3.59360E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr5	68850922	G	C	0.00323	OCLN	+	FALSE	AluSx4	SINE,Alu
chr2	9629955	G	T	0.00866	ADAM17	-	FALSE
chr5	130537006	C	A	0.00020	LYRM7	+	FALSE	AluSx4	SINE,Alu
chr3	194309210	G	A	0.00317	TMEM44-AS1,TMEM44	+,-	FALSE
chr1	9643054	A	G	5.80579E-05		.	FALSE	AluSx	SINE,Alu
chr3	15114421	T	C	0.00353	RBSN	-	TRUE	AluY	SINE,Alu
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chr1	27202812	T	C	0.00388		.	FALSE	AluSq2	SINE,Alu
chr1	46075189	C	A	0.00597	NASP	+	FALSE	A-rich	SINE,Alu
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr1	46075720	A	G	0.00105	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	46075664	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr15	63363384	C	A	0.00161	TPM1	+	FALSE
chr12	69160464	A	G	0.00041		.	FALSE	AluJb	SINE,Alu
chr11	8707908	A	G	0.00262	RPL27A	+	TRUE	AluSx1	SINE,Alu
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr1	231154935	C	T	0.00093	FAM89A	-	FALSE
chr1	145512073	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	183533964	T	C	2.38465E-05	MAP6D1	-	FALSE
chr3	15114306	T	C	0.00036	RBSN	-	TRUE	AluY	SINE,Alu
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr12	98942886	A	G	1.80851E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	29135468	C	G	0.00262	WDR43	+	FALSE
chr19	21367088	A	G	0.00018	ZNF431	+	TRUE	AluSc	SINE,Alu
chr2	206987229	T	C	0.00743		.	FALSE	AluSx	SINE,Alu
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr1	155403831	A	G	0.00676	ASH1L,POU5F1P4	+,-	FALSE
chr2	37333930	T	C	0.00073	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr19	41097276	C	G	0.00188	SHKBP1	+	FALSE
chr2	187544218	T	G	0.00796	ITGAV	+	FALSE
chr2	206858904	C	T	0.00783	INO80D	-	FALSE
chr10	13687171	T	C	0.00033	FRMD4A	-	FALSE
chr1	94351063	A	T	0.00855	GCLM	-	FALSE
chr12	69237509	A	G	1.55617E-05	MDM2	+	TRUE
chr10	17362784	A	G	0.00261	ST8SIA6	-	FALSE
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr2	10076828	A	G	0.00026		.	FALSE	AluJr	SINE,Alu
chr2	37331037	T	C	0.00026		.	FALSE	AluSx1	SINE,Alu
chr3	170113815	G	T	0.00586	SKIL	+	FALSE
chr1	203766875	T	C	3.09664E-07	ZC3H11A,ZBED6	+	FALSE
chr1	19234103	G	A	0.00014	IFFO2	-	FALSE
chr5	177019196	G	C	0.00509	TMED9	+	FALSE	(GCG)n	SINE,Alu
chr15	43698008	C	T	0.00175	TUBGCP4	+	FALSE	AluSp	SINE,Alu
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr1	25570563	A	T	0.00276	RSRP1	-	FALSE	Alu	SINE,Alu
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr1	6282315	T	C	0.00508	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	144868170	C	T	0.00415	NBPF20,PDE4DIP	+,-	FALSE
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr1	179326908	A	G	0.00037	SOAT1	+	TRUE	AluJo	SINE,Alu
chr10	23408278	C	T	0.00042	MSRB2	+	FALSE
chr1	114306369	A	T	0.00834	RSBN1	-	FALSE
chr1	1164179	G	A	0.00983	SDF4	-	FALSE	G-rich	SINE,Alu
chr6	36894340	A	G	0.00575	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr12	56510707	G	A	0.00056	RPL41	+	FALSE
chr15	52840681	C	T	0.00789	ARPP19	-	FALSE	AluSx1	SINE,Alu
chr7	128097846	A	G	0.00015	HILPDA	+	TRUE	AluSx1	SINE,Alu
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	27955296	C	T	3.87648E-07	KLHL42	+	FALSE
chr2	91955209	G	A	6.38312E-06		.	FALSE
chr2	9629414	A	G	0.00539	ADAM17	-	FALSE	AluY	SINE,Alu
chr1	92862836	A	G	0.00430		.	FALSE	AluJr	SINE,Alu
chr1	145513017	A	G	0.00142	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	10519982	T	C	3.22355E-05		.	FALSE	AluJr	SINE,Alu
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr1	10367058	G	A	0.00328	KIF1B	+	FALSE
chr1	108742130	T	C	1.29742E-06	SLC25A24	-	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr9	108152702	G	A	2.83018E-05	SLC44A1	+	FALSE
chr4	52888026	A	C	0.00677	SGCB	-	FALSE
chr5	150647736	G	T	0.00964	GM2A	+	FALSE	AluSc	SINE,Alu
chr1	9643155	A	G	0.00015		.	FALSE	AluSx	SINE,Alu
chr2	37328034	T	C	0.00380		.	FALSE
chr2	162849312	G	C	0.00840	DPP4	-	FALSE
chr1	36068276	T	C	2.73596E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	68426312	G	A	0.00344	SLC30A5	+	FALSE
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr1	145499276	C	T	0.00581	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	145281613	C	A	0.00979	NBPF20,NOTCH2NL	+	FALSE
chr14	53243394	T	C	0.00957	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	19665566	A	C	0.00028	CAPZB	-	FALSE
chr1	44423703	C	T	1.21014E-14	IPO13	+	FALSE
chr10	15120179	T	C	3.12210E-06	ACBD7	-	FALSE	L1PA7	SINE,Alu
chr1	6283296	T	C	0.00106	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	180247474	T	C	0.00022		.	FALSE
chr1	10520099	T	C	6.30717E-05		.	FALSE	AluSx	SINE,Alu
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr2	204312707	C	T	0.00154	RAPH1	-	FALSE
chr7	65844563	G	A	0.00581	LINC00174	-	FALSE
chr1	6283264	T	C	0.00287	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	93803622	T	C	0.00096	CCDC18-AS1	-	TRUE	AluJr	SINE,Alu
chr2	85132779	T	G	1.13350E-06	TMSB10	+	FALSE
chr1	36068276	T	C	0.00225	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	143915879	A	C	0.00097		.	FALSE
chr1	179813613	T	C	7.15786E-05	TOR1AIP2	-	FALSE
chr7	25160004	T	C	0.00915	CYCS	-	TRUE
chr12	54634306	T	C	0.00616	CBX5	-	TRUE	AluJr	SINE,Alu
chr1	151846854	T	G	0.00626	THEM4	-	FALSE	AluSx	SINE,Alu
chr9	124095000	T	G	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr1	205687341	C	T	0.00494	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	36386905	G	T	0.00065	AGO1	+	FALSE
chr1	19565338	C	T	0.00631	LOC101927895,EMC1	+,-	FALSE
chr1	53289852	A	G	0.00020	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr6	13788297	T	C	0.00077	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	197682723	T	A	0.00686	IQCG	-	FALSE
chr22	22050366	T	C	0.00449	PPIL2	+	FALSE	MER5A	SINE,Alu
chr1	237063504	A	G	0.00900	MTR	+	FALSE	L1ME3F	SINE,Alu
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr12	57450118	T	A	0.00669	NEMP1	-	FALSE
chr1	146649884	T	A	0.00612	PDIA3P1	+	FALSE
chr3	196556141	G	A	0.00534	PAK2	+	FALSE
chr1	185069561	A	G	0.00675	RNF2	+	FALSE
chr4	186081819	C	T	3.85218E-06	CFAP97	-	FALSE
chr1	109747415	A	G	0.00549	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr4	1205667	A	C	0.00611	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	26801762	G	T	0.00762	HMGN2	+	FALSE
chr15	44055281	T	C	0.00580	PDIA3	+	FALSE
chr1	36068370	T	C	0.00846	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr2	37328097	T	C	0.00018		.	FALSE
chr2	72403402	C	A	0.00108	EXOC6B	-	FALSE	GA-rich	SINE,Alu
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr1	16932144	A	C	0.00559	NBPF1	-	FALSE
chr1	76227022	A	G	0.00759	ACADM	+	FALSE
chr3	15113733	T	C	0.00228	RBSN	-	TRUE	AluSz6	SINE,Alu
chr9	19373160	A	G	0.00404	DENND4C	+	FALSE	MADE1	SINE,Alu
chr1	145512074	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	128061053	A	G	0.00184	MAP3K2	-	FALSE
chr1	9329289	C	T	0.00303	H6PD	+	FALSE
chr1	36535560	A	G	0.00059		.	FALSE	AluSx1	SINE,Alu
chr2	98388810	G	T	6.24900E-05	TMEM131	-	FALSE
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr3	186288565	A	G	0.00680	DNAJB11	+	FALSE

RBP	SRSF3
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR376FGR
Platform	HiSeq
Pubmed ID	32252787

SRSF3 - Target Gene Network