RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	47184569	G	C	0.00509	EFCAB14	-	FALSE
chr1	214525603	A	G	0.00047	PTPN14	-	FALSE
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr1	6582353	T	C	0.00121	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	16932428	C	G	0.00197	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	19542250	T	C	0.00859	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	99813015	A	G	0.00235	MRPL30	+	TRUE	AluJb	SINE,Alu
chr17	38798073	T	G	0.00692	SMARCE1	-	FALSE
chr2	25456869	G	A	0.00902	DNMT3A	-	FALSE
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr1	156206121	G	A	0.00423	PMF1-BGLAP,PMF1	+	FALSE
chr1	211921702	T	C	0.00014	LPGAT1	-	FALSE
chr4	2940397	T	C	0.00010	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	28835847	A	G	0.00553	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr9	133997543	C	G	0.00046	AIF1L	+	FALSE
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr10	51026705	C	G	0.00456	PARG	-	FALSE
chr2	25042625	C	G	0.00766	CENPO,ADCY3	+,-	FALSE
chr1	11982544	T	C	4.37710E-05	KIAA2013	-	FALSE
chr1	93826775	T	C	0.00172	DR1	+	FALSE
chr2	91955209	G	A	6.38312E-06		.	FALSE
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr1	1594977	T	C	0.00487	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	10521254	T	C	0.00023	DFFA	-	TRUE	AluY	SINE,Alu
chr1	109242607	G	A	0.00652	PRPF38B	+	FALSE
chr2	47387305	G	T	0.00322	CALM2	-	FALSE
chr1	36068210	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	26801762	G	T	0.00762	HMGN2	+	FALSE
chr1	46164493	T	C	0.00330	IPP	-	TRUE	AluJb	SINE,Alu
chr1	19282314	G	T	0.00158	IFFO2	-	FALSE
chr2	37330431	T	C	0.00231		.	FALSE	AluSq2	SINE,Alu
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr3	125248855	C	A	0.00071	OSBPL11	-	FALSE
chr1	20976589	C	T	0.00407	PINK1,PINK1-AS	+,-	FALSE
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr1	54571374	A	G	0.00280	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr3	196466874	G	T	0.00226	PAK2	+	FALSE
chr1	6283273	T	C	0.00109	ICMT	-	TRUE	AluSx3	SINE,Alu
chr8	124262076	G	T	0.00115	ZHX1-C8orf76,ZHX1	-	FALSE
chr3	48485452	T	A	0.00363	TMA7	+	FALSE
chr1	228107281	G	A	0.00833		.	FALSE
chr1	114940246	C	A	0.00628	TRIM33	-	FALSE
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr1	31346203	A	C	0.00050	SDC3	-	FALSE
chr2	10586899	G	A	0.00312	ODC1,SNORA80B	-	FALSE
chr1	145284175	G	C	0.00481	NBPF20,NOTCH2NL	+	FALSE
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	143231313	G	A	0.00137		.	FALSE
chr1	19543456	T	C	3.77297E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr1	1344757	A	G	0.00024		.	FALSE	AluSx1	SINE,Alu
chr6	160100882	T	C	3.93365E-05	SOD2	-	TRUE	AluSz	SINE,Alu
chr1	9328243	A	G	0.00616	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	33149495	A	G	0.00652	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	28826118	A	G	0.00039	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	73339708	G	A	0.00991	RAB11FIP5	-	FALSE
chr4	88060832	T	C	0.00531	AFF1	+	FALSE
chr1	97144750	T	C	0.00262		.	FALSE
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr2	200792052	G	A	0.00378	C2orf69	+	FALSE
chr1	94995491	C	T	0.00036	F3	-	FALSE	AluSx	SINE,Alu
chr7	17384395	A	G	0.00856	AHR	+	TRUE	AluSx	SINE,Alu
chr14	74526154	T	C	0.00030	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr14	53109823	T	C	2.25911E-06	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	148341981	T	C	0.00226	NBPF8,NBPF14,NBPF9	-	FALSE
chr5	72876776	C	A	0.00875	UTP15	+	FALSE
chr14	21928999	T	C	2.57107E-05	RAB2B	-	TRUE	AluSp	SINE,Alu
chr1	53292607	T	A	0.00680	ZYG11B	+	FALSE
chr19	18477337	A	G	0.00085	PGPEP1	+	TRUE	AluSx1	SINE,Alu
chr17	56049824	T	C	5.91767E-06	VEZF1	-	TRUE
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr1	6283305	T	C	0.00496	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	37331065	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chr19	11560461	A	G	0.00034	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr6	13788222	T	C	0.00490	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	108113839	T	C	0.00062	VAV3	-	FALSE
chr16	5134599	G	C	0.00355	ALG1,EEF2KMT	+,-	FALSE
chr2	223807817	A	C	0.00991	ACSL3	+	FALSE	(A)n	SINE,Alu
chr2	203744241	T	C	0.00511		.	FALSE	AluSx	SINE,Alu
chr1	120695202	C	A	0.00033		.	FALSE
chr1	28662253	A	G	0.00187	MED18	+	TRUE	AluSq2	SINE,Alu
chr9	137534059	C	A	0.00626	COL5A1	+	FALSE
chr11	118875356	A	G	0.00051	CCDC84	+	TRUE
chr2	238244963	A	G	0.00124	COL6A3	-	FALSE
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr3	71005566	C	T	0.00209	FOXP1	-	FALSE	(T)n	SINE,Alu
chr6	158364714	A	G	0.00442	SNX9	+	FALSE
chr1	86118417	T	G	0.00211	ZNHIT6	-	FALSE
chr1	92147985	C	A	0.00370	TGFBR3	-	FALSE
chr17	65334753	T	C	4.53868E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr6	25986717	A	G	0.00217	TRIM38	+	TRUE	AluJb	SINE,Alu
chr14	75202856	A	G	3.12821E-09	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	211917176	C	T	0.00498	LPGAT1	-	FALSE
chr16	56510329	T	G	0.00247	OGFOD1	+	FALSE
chr3	37031951	G	A	0.00154	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr4	57326875	A	G	0.00456	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr1	153907287	G	C	0.00159	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr1	231154918	G	T	0.00022	FAM89A	-	FALSE	(T)n	SINE,Alu
chr5	177576458	A	T	0.00427		.	FALSE
chr5	125880589	T	C	0.00122	ALDH7A1	-	FALSE
chr17	58024275	A	G	0.00455	RPS6KB1	+	FALSE
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr1	145293012	G	A	0.00250	NBPF20	+	FALSE
chr17	49042206	T	C	0.00030	SPAG9	-	TRUE	AluJb	SINE,Alu
chr6	150047376	T	C	0.00612	NUP43	-	TRUE	AluSc	SINE,Alu
chr10	120920588	T	C	0.00304	SFXN4	-	FALSE
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	39317318	C	A	1.55431E-15	RRAGC	-	FALSE
chr9	138798859	C	A	0.00291	CAMSAP1	-	FALSE
chr4	843695	A	G	0.00602	GAK	-	FALSE
chr1	168220341	A	G	0.00179		.	FALSE	AluSz6	SINE,Alu
chr19	13884096	A	G	0.00049	MRI1	+	TRUE	AluSz	SINE,Alu
chr14	53243545	T	C	3.01634E-08	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr2	37429737	A	G	0.00439	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr16	57505637	T	A	0.00643	POLR2C	+	FALSE
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr1	990280	C	T	0.00243	AGRN	+	FALSE
chr8	11700676	T	C	0.00534	CTSB	-	TRUE	AluSg	SINE,Alu
chr3	58306797	A	G	8.72021E-05		.	FALSE	AluSz	SINE,Alu
chr2	36776053	T	C	0.00029	CRIM1	+	FALSE
chr2	86249840	T	C	0.00482	LOC90784	-	TRUE	AluJr	SINE,Alu
chr19	13054905	T	C	0.00324	CALR	+	FALSE	(T)n	SINE,Alu
chr1	16902943	T	C	0.00833	NBPF1	-	FALSE
chr1	19543459	T	C	0.00395	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	94297294	T	G	0.00494	PEG10	+	FALSE
chr1	94702991	G	C	0.00397	ARHGAP29	-	FALSE
chr6	42856045	A	G	0.00428	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	128950497	A	G	4.96654E-06	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	85488830	T	C	0.00137	MCOLN3	-	TRUE	AluJr	SINE,Alu
chr1	223967953	C	T	0.00341	TP53BP2	-	FALSE
chr1	19543352	T	C	0.00715	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr1	31405694	G	A	0.00986	PUM1	-	FALSE
chr1	9642830	T	A	0.00059	SLC25A33	+	FALSE
chr1	6161107	A	T	0.00218	KCNAB2	+	FALSE
chr3	101405564	G	A	0.00354		.	FALSE
chr1	19542631	T	C	0.00176	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr8	95805071	A	G	1.12730E-06	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr1	121134204	G	T	0.00557	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr1	36068231	T	C	9.19439E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	88104167	T	C	0.00919	CGGBP1	-	FALSE
chr1	6257826	T	C	0.00192	RPL22	-	FALSE
chr6	3022544	T	C	7.02821E-06	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr16	66923393	A	G	0.00228	PDP2	+	TRUE	AluSz	SINE,Alu
chr1	114939633	G	A	0.00188	TRIM33	-	FALSE
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr4	17803604	T	C	0.00172	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	145512151	C	A	0.00723	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	109401286	G	T	0.00087	RANBP2	+	FALSE
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr1	200589540	T	A	0.00151	KIF14	-	FALSE
chr12	125511404	A	G	0.00201	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	146495577	T	A	0.00072	LOC728989	-	FALSE
chr1	36068276	T	C	0.00339	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	73116345	T	A	5.66390E-05	PPP4R2	+	FALSE
chr16	81422951	T	C	0.00074		.	FALSE
chr2	99812988	A	G	8.76694E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	26226610	C	T	0.00955	STMN1	-	FALSE
chr1	11979814	G	A	0.00041	KIAA2013	-	FALSE
chr1	1677253	T	C	0.00145	SLC35E2	-	FALSE
chr1	224380757	A	G	0.00618	DEGS1	+	FALSE	AluSx	SINE,Alu
chr5	60050122	A	T	0.00272	ELOVL7	-	FALSE
chr1	64095111	A	G	0.00201	PGM1	+	FALSE
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr1	1717439	T	A	0.00663	GNB1	-	FALSE
chr19	57804719	A	C	0.00361	ZNF460	+	FALSE
chr1	9160982	T	C	0.00304		.	FALSE	AluJb	SINE,Alu
chr1	19665557	A	C	0.00365	CAPZB	-	FALSE
chr22	37962318	T	C	0.00884	CDC42EP1	+	FALSE
chr13	79188534	T	A	0.00698	RNF219-AS1,RNF219	+,-	FALSE
chr1	1252468	T	C	0.00182	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	160967855	T	C	0.00042	F11R	-	TRUE	AluSp	SINE,Alu
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr2	85772405	T	A	0.00016	GGCX	-	FALSE
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chrX	77084007	T	C	0.00141	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	168220479	A	G	0.00113		.	FALSE	AluSz6	SINE,Alu
chrX	123046306	A	G	0.00016	XIAP	+	TRUE	AluJb	SINE,Alu
chr3	127790249	A	G	0.00057	RUVBL1,SEC61A1	+,-	FALSE
chr1	68168152	C	T	0.00258	GNG12	-	FALSE
chr1	212535032	T	G	0.00028	PPP2R5A	+	FALSE
chr2	3609064	G	A	0.00212	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chrM	10307	A	C	0.00588		.	FALSE
chr5	134062605	C	T	0.00019	SEC24A	+	FALSE
chr1	25687621	A	T	0.00256	TMEM50A	+	FALSE
chr1	118502750	T	C	0.00922	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	142804438	G	T	0.00522		.	FALSE
chr3	44791343	T	C	0.00539	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr3	42643425	G	A	0.00482	NKTR	+	FALSE	L2a	SINE,Alu
chr6	47594192	C	T	0.00591	CD2AP	+	FALSE
chr2	20818286	A	C	0.00714	HS1BP3	-	FALSE
chr1	149581866	C	G	0.00774	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr1	12058878	T	C	0.00110	MFN2	+	FALSE
chr1	92862826	A	G	0.00100		.	FALSE	AluJr	SINE,Alu
chr3	15113694	T	C	0.00622	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	10519947	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr7	143003523	T	G	2.48474E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr2	187544230	T	A	0.00930	ITGAV	+	FALSE
chr3	99517479	T	C	8.06312E-05	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr4	248783	A	G	0.00901	ZNF876P	+	FALSE	L1MA3	SINE,Alu
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr3	72425248	T	A	0.00281	RYBP	-	FALSE
chr3	10192784	A	G	1.73909E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr4	2940462	T	C	6.45116E-07	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr10	89005496	T	G	0.00138	NUTM2A-AS1	-	FALSE	MSTB1	SINE,Alu
chr6	33172015	T	C	5.04816E-05		.	FALSE
chr12	125512218	A	G	0.00392		.	FALSE	AluSx1	SINE,Alu
chr4	129796171	A	G	0.00540	JADE1	+	FALSE
chr1	113673737	A	G	0.00798		.	FALSE	AluSx1	SINE,Alu
chr1	16932783	G	C	0.00843	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr1	39471000	G	A	0.00518	AKIRIN1	+	FALSE
chr1	148753329	A	G	7.42327E-05		.	FALSE
chr11	94801637	T	C	0.00726	SRSF8	+	FALSE
chr2	232319593	A	C	0.00348	NCL	-	FALSE	A-rich	SINE,Alu
chr6	33648144	C	T	0.00453	ITPR3	+	FALSE
chr20	18468633	C	A	3.51877E-10	RBBP9	-	FALSE
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr2	242512159	A	G	0.00243	BOK	+	FALSE
chr1	10520331	C	T	0.00060		.	FALSE	AluSx1	SINE,Alu
chr17	77807105	C	A	4.63827E-05	CBX4	-	FALSE
chr1	179045672	G	A	0.00411	FAM20B	+	FALSE
chr2	231032372	A	G	0.00691		.	FALSE	MLT1H	SINE,Alu
chr1	86049363	C	T	0.00064	CYR61	+	FALSE
chr1	1477244	T	C	0.00365	SSU72	-	FALSE
chr2	64327544	G	T	0.00340	PELI1	-	FALSE
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr1	206581246	T	C	0.00210	SRGAP2	+	FALSE
chr2	72968440	T	A	0.00138	EXOC6B	-	FALSE
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	10520888	C	T	0.00958	DFFA	-	FALSE
chr1	28661767	A	G	0.00144	MED18	+	TRUE	AluSg	SINE,Alu
chr14	53242639	T	C	1.43651E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr9	115447534	T	C	0.00203	INIP	-	TRUE	AluJb	SINE,Alu
chr1	226923264	G	A	0.00046	ITPKB	-	FALSE
chr1	24128467	C	T	0.00481	HMGCL	-	FALSE
chr8	27661063	T	A	0.00138	ESCO2	+	FALSE	(AC)n	SINE,Alu
chr1	10517352	T	C	0.00050		.	FALSE	AluJr	SINE,Alu
chr2	37230734	C	T	0.00025	HEATR5B	-	FALSE
chr1	37958451	C	G	0.00882	MEAF6	-	FALSE	MER5B	SINE,Alu
chr6	42856917	A	G	0.00148	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	709591	G	A	0.00226	LOC100288069	-	FALSE
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr1	15904318	C	T	0.00109	AGMAT	-	FALSE
chr6	42854580	A	G	0.00330	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr6	42856064	A	G	0.00019	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	196293764	G	C	0.00392	WDR53	-	FALSE
chr1	26449336	A	G	0.00343	PDIK1L	+	FALSE
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr6	37138022	C	G	0.00953	PIM1	+	FALSE
chr1	19953124	G	A	0.00137	MINOS1,MINOS1-NBL1	+	FALSE
chr15	93198678	T	C	0.00064	FAM174B	-	FALSE	(GCCGCT)n	SINE,Alu
chr2	55462744	C	A	0.00033	RPS27A	+	FALSE
chr1	40214261	A	G	0.00879	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	16889985	T	C	0.00583	NBPF1	-	FALSE
chr5	10655842	C	T	0.00024	ANKRD33B	+	FALSE
chr5	41917720	T	G	0.00727	C5orf51	+	FALSE
chr3	47627382	A	T	2.68370E-06	SMARCC1	-	FALSE
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr7	154796171	G	A	0.00066	PAXIP1-AS1	+	FALSE	AluSx3	SINE,Alu
chr1	55207988	G	A	0.00914	MROH7-TTC4,TTC4	+	FALSE
chr11	35017260	T	C	0.00224	PDHX	+	FALSE
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr1	203767822	T	G	0.00064	ZC3H11A,ZBED6	+	FALSE
chr2	217366197	T	A	0.00018		.	FALSE
chr14	31916462	T	C	0.00059	LOC101927124,DTD2	+,-	FALSE	FLAM_C	SINE,Alu
chrX	77083828	T	C	1.52468E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr2	128601490	T	C	0.00013		.	FALSE	AluJr	SINE,Alu
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr16	48387238	A	G	0.00013	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	145369589	T	C	0.00128	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr4	39551166	T	C	0.00309	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr1	1255402	C	G	0.00785	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr1	16112795	A	G	4.56234E-06	FBLIM1	+	FALSE
chr1	36068295	T	C	2.11660E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr10	124913908	C	A	0.00784	BUB3	+	FALSE
chr2	153512503	C	T	0.00082	PRPF40A	-	FALSE
chr1	149576483	G	A	0.00323	LINC00623,LINC00869,LOC103091866	+	FALSE
chr1	78414329	G	A	0.00635	FUBP1	-	FALSE	A-rich	SINE,Alu
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr5	130537747	A	G	1.40133E-05	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	144594308	G	A	0.00577	NBPF20	+	FALSE
chr1	46751578	T	G	0.00380	LRRC41	-	FALSE
chr1	10521254	T	C	2.63330E-05	DFFA	-	TRUE	AluY	SINE,Alu
chrX	9863112	A	G	0.00498	SHROOM2	+	FALSE
chr3	73115786	T	C	0.00470	PPP4R2	+	FALSE
chr1	10520767	T	C	4.75457E-05	DFFA	-	TRUE	AluSc8	SINE,Alu
chr2	238678004	A	G	0.00631	LRRFIP1	+	FALSE
chr3	183861750	A	C	1.09807E-05	EIF2B5	+	FALSE
chr4	17803673	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr6	30593890	A	G	0.00584		.	FALSE
chr1	19543456	T	C	0.00760	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	108742632	C	T	0.00933	SLC25A24	-	FALSE
chr3	40578997	A	G	0.00094	ZNF621	+	TRUE	AluJr	SINE,Alu
chr5	110463621	G	T	0.00786	WDR36	+	FALSE	(T)n	SINE,Alu
chr17	5288079	A	C	0.00085	RABEP1	+	FALSE
chr1	26755643	A	G	0.00728	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	10520099	T	C	6.30717E-05		.	FALSE	AluSx	SINE,Alu
chr1	100654789	T	C	0.00014	DBT	-	TRUE	AluSz	SINE,Alu
chr15	41590839	A	G	0.00344	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	28825337	A	G	0.00191	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr3	10290508	C	T	0.00682	TATDN2	+	FALSE
chr14	90509564	C	T	0.00552	TDP1	+	FALSE
chr1	16889985	T	C	0.00778	NBPF1	-	FALSE
chr1	45975574	A	G	0.00050	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr3	196558949	A	G	6.63189E-10	PAK2	+	FALSE
chr5	114951140	T	G	0.00761	TMED7-TICAM2,LOC101927100,TMED7	+,-	FALSE
chr1	10517276	T	C	0.00252		.	FALSE	AluJr	SINE,Alu
chr19	53155567	T	C	0.00137	ZNF83	-	TRUE	AluSg	SINE,Alu
chr6	30692305	A	G	0.00500		.	FALSE	L2a	SINE,Alu
chr1	78184325	A	G	0.00150	USP33	-	FALSE
chr1	111489903	A	C	0.00666	LRIF1	-	FALSE
chr2	99812808	A	G	5.12907E-06	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr1	10517688	T	C	0.00179		.	FALSE	AluSx1	SINE,Alu
chr8	56985611	A	T	0.00028	RPS20	-	FALSE
chr1	6583138	T	C	0.00010	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	212114666	C	G	0.00858	INTS7	-	FALSE
chr4	155457051	A	T	0.00378	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	10520487	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr4	71859287	C	G	0.00557	DCK	+	FALSE
chr5	64964623	T	C	1.14652E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr3	15114399	T	C	0.00848	RBSN	-	TRUE	AluY	SINE,Alu
chr1	36067677	T	C	0.00462	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	949472	G	A	9.07885E-12	ISG15	+	FALSE
chr1	203771852	G	T	0.00883	ZC3H11A	+	FALSE	(T)n	SINE,Alu
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr5	130537154	A	G	0.00951	LYRM7	+	TRUE	AluSp	SINE,Alu
chr4	17803604	T	C	0.00174	DCAF16	-	TRUE	AluY	SINE,Alu
chr12	120898658	A	G	0.00372	GATC	+	TRUE	AluY	SINE,Alu
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr1	197477932	C	T	0.00488	DENND1B	-	FALSE
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr19	18476232	A	G	0.00189	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr1	173860808	A	G	0.00042		.	FALSE	FLAM_A	SINE,Alu
chr3	44790781	T	C	0.00074	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	37327662	T	C	0.00022		.	FALSE
chr1	77557891	T	C	0.00557	PIGK	-	FALSE
chr1	16933327	C	T	6.62916E-05	NBPF1	-	FALSE
chr1	10517691	T	C	9.61087E-05		.	FALSE	AluSx1	SINE,Alu
chr1	150703860	T	C	0.00222	CTSS	-	TRUE	AluSx	SINE,Alu
chr2	202252539	G	A	0.00293	TRAK2	-	FALSE
chr3	195701389	C	A	0.00227	SDHAP1	-	FALSE
chr3	150345451	A	G	2.37481E-05	SELT	+	TRUE
chr1	9328213	A	G	5.00055E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	36776056	T	A	0.00030	CRIM1	+	FALSE
chr6	29910583	C	T	4.95604E-05		.	FALSE
chr17	67538540	T	C	0.00295		.	FALSE
chr1	25570565	G	A	0.00094	RSRP1	-	FALSE	Alu	SINE,Alu
chr3	10192717	A	G	3.16601E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	36529549	A	G	0.00806		.	FALSE	AluJr	SINE,Alu
chr2	121979980	G	A	0.00525	TFCP2L1	-	FALSE	L1MB8	SINE,Alu
chr10	51612914	T	C	0.00063	TIMM23B,TIMM23	+,-	FALSE
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr1	36068052	G	T	1.43241E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr2	32535287	A	G	0.00891		.	FALSE	FLAM_C	SINE,Alu
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr3	49396588	T	C	0.00239	RHOA	-	FALSE
chr3	195451488	C	T	1.73907E-06	MUC20	+	FALSE
chr3	12624321	A	G	2.86985E-06	MKRN2	+	FALSE
chr1	47685593	A	C	0.00891	TAL1	-	FALSE	(CCACCC)n	SINE,Alu
chr1	10519946	T	C	0.00080		.	FALSE	AluJr	SINE,Alu
chr1	36067784	T	C	1.34898E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr16	19715518	T	C	0.00502		.	FALSE	AluSg	SINE,Alu
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr1	79126336	C	G	1.94494E-06	IFI44	+	FALSE
chr16	74734743	G	C	0.00436	MLKL	-	FALSE
chr1	10518037	T	C	0.00285		.	FALSE	AluJr	SINE,Alu
chr3	15114486	T	C	3.99101E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr17	30327115	C	T	0.00522	SUZ12	+	FALSE
chr2	208619590	A	G	0.00274	CCNYL1,MIR4775	+	TRUE	EutTc1-N2	SINE,Alu
chr15	74319092	A	G	0.00029	PML	+	TRUE	AluSz6	SINE,Alu
chr3	49315588	T	G	0.00182	USP4	-	FALSE
chr4	17802919	T	C	0.00857	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	110373919	G	A	0.00669	SOWAHC	+	FALSE
chr6	33377511	T	C	5.31992E-06		.	FALSE	(TG)n	SINE,Alu
chr1	28662105	A	G	0.00846	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	117945040	G	A	0.00181	MAN1A2	+	FALSE
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr19	18477761	A	G	0.00461	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr1	68167935	A	G	0.00390	GNG12	-	FALSE
chr15	40954864	A	G	0.00636	KNL1	+	TRUE
chr2	10586903	A	C	0.00041	ODC1,SNORA80B	-	FALSE
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr1	53289940	A	G	7.75582E-06	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr3	93846831	G	A	0.00547		.	FALSE	AluSq2	SINE,Alu
chr1	152187183	C	A	0.00373	HRNR	-	FALSE
chr1	171561203	T	G	0.00075	PRRC2C	+	FALSE
chr1	53289940	A	G	0.00694	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	225683184	G	T	0.00741	ENAH	-	FALSE
chr2	36777209	T	C	0.00299	CRIM1	+	FALSE	(TG)n	SINE,Alu
chr14	23795219	C	T	0.00201	BCL2L2-PABPN1,PABPN1	+	FALSE
chr19	65146	G	A	0.00761	WASH5P	-	FALSE
chr10	99504630	G	T	0.00544	ZFYVE27	+	FALSE
chr1	21810587	A	G	0.00563	NBPF3	+	FALSE
chr2	37327702	T	C	0.00519		.	FALSE
chr1	204525649	A	G	0.00191	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	150190851	G	T	0.00339	ANP32E	-	FALSE
chr3	197611262	A	G	0.00208		.	FALSE	AluSx1	SINE,Alu
chr12	98943202	A	G	6.48893E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr3	5222483	T	G	1.83612E-05	ARL8B	+	FALSE
chr10	101992783	T	C	0.00313	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	93827990	C	A	0.00517	DR1	+	FALSE
chr1	179326908	A	G	0.00037	SOAT1	+	TRUE	AluJo	SINE,Alu
chr2	128620436	C	T	0.00342	AMMECR1L	-	FALSE
chr1	1337841	C	A	0.00186	MRPL20	-	FALSE
chr1	179829096	T	C	4.38746E-06	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr6	159395409	T	C	0.00136		.	FALSE
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	207943385	A	G	0.00751	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	16889566	T	C	0.00305	NBPF1	-	TRUE
chr7	32908135	C	G	0.00076	KBTBD2	-	FALSE
chr1	118166096	C	T	0.00861	FAM46C	+	FALSE
chr1	36534024	A	G	0.00635		.	FALSE	FLAM_A	SINE,Alu
chr1	6585215	C	T	0.00286	NOL9	-	FALSE	FAM	SINE,Alu
chr12	98942820	A	G	0.00568	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	86251151	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr6	143382538	A	T	0.00145	AIG1	+	FALSE
chr3	14986137	T	C	1.37684E-08	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	110551680	C	T	0.00415	AHCYL1	+	FALSE
chr5	89820984	T	C	0.00921	LYSMD3	-	FALSE
chr3	126156660	C	G	0.00182	ZXDC	-	FALSE
chr1	204525666	A	G	0.00093	MDM4	+	TRUE	AluSz	SINE,Alu
chr3	98541116	G	A	1.05300E-07	DCBLD2	-	FALSE
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr1	121133995	G	C	0.00575	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	10521172	T	C	1.01590E-06	DFFA	-	TRUE	AluY	SINE,Alu
chr1	19943823	C	A	0.00752	MINOS1,MINOS1-NBL1	+	FALSE
chr2	174090636	T	A	0.00043	ZAK,MLK7-AS1	+,-	FALSE
chr2	98090925	T	C	0.00056	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr3	49067308	G	A	0.00278	QRICH1	-	FALSE
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr2	37330503	T	C	0.00177		.	FALSE	AluSq2	SINE,Alu
chr1	145688944	A	G	0.00359	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr4	190878580	A	G	0.00052	FRG1	+	FALSE
chr1	154317153	C	T	0.00567	ATP8B2	+	FALSE
chr3	182639121	A	G	0.00048	ATP11B	+	FALSE
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr1	1246978	A	T	0.00760	PUSL1,CPSF3L	+,-	FALSE
chr3	50296329	G	A	0.00884	GNAI2	+	FALSE
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	45975266	A	G	0.00345	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	900721	T	C	0.00032	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chr1	226171400	T	C	0.00359	SDE2	-	TRUE	BC200	SINE,Alu
chr2	112874290	A	T	0.00455	TMEM87B	+	FALSE
chr1	16576291	A	G	0.00842	FBXO42	-	FALSE	A-rich	SINE,Alu
chr11	94801636	C	G	0.00522	SRSF8	+	FALSE
chr1	36924851	T	C	0.00493	MRPS15	-	TRUE	AluJb	SINE,Alu
chr5	121362874	A	G	0.00607	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr1	149816373	G	A	0.00364		.	FALSE	(A)n	SINE,Alu
chr5	10265488	A	G	0.00120	CCT5	+	FALSE
chr5	130537998	A	G	0.00380	LYRM7	+	TRUE	AluSp	SINE,Alu
chr6	33384326	A	T	0.00678		.	FALSE
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr3	46623292	T	C	0.00408	TDGF1	+	FALSE	AluSx3	SINE,Alu
chr1	45975266	A	G	0.00188	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr15	90819655	A	G	0.00174		.	FALSE	AluSx	SINE,Alu

RBP	BCLAF1
Knock-Method	shRNA
RBP Family	THRAP3_BCLAF1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR481AYC
Platform	HiSeq
Pubmed ID	32252787

BCLAF1 - Target Gene Network