RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	57002773	A	G	0.00162	PLPP3	-	FALSE
chr3	124948045	G	C	0.00784	ZNF148	-	FALSE
chr1	38327586	C	T	0.00198	INPP5B	-	FALSE	AluSx3	SINE,Alu
chr1	19586520	A	G	0.00846	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	220323448	C	T	0.00985	RAB3GAP2	-	FALSE
chr4	160280309	G	T	0.00770	RAPGEF2	+	FALSE	(T)n	SINE,Alu
chr1	109747415	A	G	0.00549	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr7	26708303	G	T	0.00095	SKAP2	-	FALSE	AluSx3	SINE,Alu
chr8	91637754	A	T	0.00297	TMEM64	-	FALSE
chr1	145512944	A	G	0.00178	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	19543353	T	C	0.00091	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16889502	T	C	0.00468	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr18	47920424	A	G	0.00000	SKA1	+	FALSE	MER21C	SINE,Alu
chr1	166820104	G	A	0.00477	POGK	+	FALSE	MER1B	SINE,Alu
chr1	1252349	A	G	0.00798	CPSF3L	-	FALSE	AluJr	SINE,Alu
chr1	176132119	G	C	0.00134	RFWD2	-	FALSE	L3b	SINE,Alu
chr21	44329971	A	G	9.72102E-05		.	FALSE	AluSx3	SINE,Alu
chr2	37327589	T	C	0.00253		.	FALSE
chr16	10624926	T	C	0.00029	EMP2	-	TRUE	AluSx3	SINE,Alu
chr17	4849959	G	T	0.00636	PFN1	-	FALSE
chr1	109475572	A	G	0.00170	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr2	61764098	A	C	0.00112	XPO1	-	FALSE
chr3	113370193	C	T	4.09251E-05	USF3	-	FALSE	UCON34	SINE,Alu
chr1	28800380	C	A	0.00709	PHACTR4	+	FALSE
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr17	79780692	T	C	0.00116	MCRIP1	-	TRUE
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr1	43309548	G	A	0.00764	ERMAP	+	FALSE
chr1	93599279	G	A	0.00849	MTF2	+	FALSE
chr19	9672312	T	C	4.30163E-05		.	FALSE	AluJr	SINE,Alu
chr1	33148635	A	G	5.17667E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	33148045	A	G	0.00264	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr6	42854682	A	G	5.90307E-05	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	36773405	T	G	0.00546	SH3D21	+	FALSE
chr11	31452750	A	G	0.00326	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr2	96915238	T	C	2.48142E-05		.	FALSE	AluJr	SINE,Alu
chr2	202031356	C	T	0.00247	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr8	41399722	A	G	0.00065	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr8	11701343	T	C	0.00280	CTSB	-	TRUE	AluSx1	SINE,Alu
chr9	14810	C	G	0.00709	WASH1	-	FALSE
chr6	42857057	A	G	0.00020	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	224517842	C	T	0.00014	NVL	-	FALSE
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr1	53288924	A	G	0.00099	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	10192672	G	A	5.82875E-07	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	109535116	G	A	0.00013	WDR47	-	FALSE
chr1	6282420	T	C	0.00779	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chr7	156763172	A	G	0.00874	NOM1	+	TRUE	AluSx	SINE,Alu
chr14	75202287	T	C	0.00757	FCF1	+	FALSE	AluSc	SINE,Alu
chr13	99056476	A	T	0.00535	FARP1	+	FALSE
chr19	45406536	G	T	0.00518	TOMM40	+	FALSE
chr19	9672465	T	C	0.00155		.	FALSE	AluJr	SINE,Alu
chr2	37075013	T	A	0.00119	STRN	-	FALSE
chr1	16576290	G	A	0.00104	FBXO42	-	FALSE	A-rich	SINE,Alu
chr1	117529752	C	A	0.00024	PTGFRN	+	FALSE
chr2	99812289	A	G	0.00282	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	40832549	C	T	2.26031E-05	RPL37	-	FALSE
chr1	36068325	T	C	0.00065	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr1	193054485	T	C	0.00439	TROVE2	+	FALSE
chr3	194373832	T	C	0.00053	LSG1	-	FALSE
chr1	62673225	G	A	0.00039	L1TD1	+	FALSE	L1MEd	SINE,Alu
chr6	143832707	G	A	0.00418	FUCA2	-	FALSE	(GCA)n	SINE,Alu
chr1	44072018	C	T	0.00783	PTPRF	+	FALSE
chr1	6314171	G	A	0.00855	GPR153	-	FALSE
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr5	31554098	G	T	2.66454E-15	C5orf22	+	FALSE
chr1	24862643	T	G	0.00933	RCAN3	+	FALSE
chr1	10518733	T	C	0.00952		.	FALSE	AluSx1	SINE,Alu
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr1	33148282	A	G	0.00825	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr1	114443458	A	G	0.00320	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr7	75958129	T	A	0.00162	YWHAG	-	FALSE
chr1	51738627	A	G	0.00024	RNF11	+	FALSE
chr3	121507231	A	T	0.00042	IQCB1	-	FALSE
chr6	150047362	T	C	0.00076	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr9	34088028	T	C	0.00854	DCAF12	-	FALSE
chr4	25278988	T	C	2.09007E-08	PI4K2B	+	FALSE
chr1	214524576	T	C	0.00060	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	6282324	T	C	0.00142	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	26144435	C	G	0.00129	SEPN1	+	FALSE
chr15	31619607	G	A	0.00887	KLF13	+	FALSE
chr1	27212513	T	C	0.00260	GPN2	-	FALSE
chr3	56703746	A	C	0.00027	FAM208A	-	FALSE
chrX	123046695	A	G	0.00054	XIAP	+	TRUE	AluSz	SINE,Alu
chr9	33466219	A	C	0.00148	NOL6	-	FALSE
chr4	185549875	A	T	0.00616	CASP3	-	FALSE
chr1	205738302	G	A	0.00661	RAB29	-	FALSE
chr1	145512151	C	A	0.00723	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr4	248840	A	G	0.00655	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr1	33149443	A	G	0.00013	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	144868170	C	T	0.00415	NBPF20,PDE4DIP	+,-	FALSE
chr2	99772827	A	G	0.00377	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr15	74319092	A	G	0.00029	PML	+	TRUE	AluSz6	SINE,Alu
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr1	16927419	G	A	0.00493	NBPF1	-	FALSE
chr10	79800436	T	G	0.00308	RPS24	+	FALSE
chr1	19499560	T	C	0.00100	UBR4	-	FALSE
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	214527252	G	A	0.00181	PTPN14	-	FALSE	MADE2	SINE,Alu
chr4	177251290	G	A	0.00580	SPCS3	+	FALSE
chr1	33148691	A	G	0.00207	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	70131584	G	A	0.00366	SNRNP27	+	FALSE
chr1	110136328	T	A	0.00577	GNAI3	+	FALSE
chr1	569782	T	C	0.00010		.	FALSE
chr17	1946503	C	G	0.00154	DPH1,OVCA2	+	FALSE
chr1	21808159	G	A	9.34000E-05	NBPF3	+	FALSE
chr1	179042687	A	G	0.00163	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr5	130537223	A	G	0.00044	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	171558516	C	T	4.87297E-05	PRRC2C	+	FALSE
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr1	6282259	T	C	0.00072	ICMT	-	TRUE	AluSz	SINE,Alu
chr19	42375584	A	G	0.00021		.	FALSE	AluSx	SINE,Alu
chr1	47840938	A	G	0.00089	CMPK1	+	FALSE
chr1	19655758	T	A	0.00044	PQLC2	+	FALSE	AluSz	SINE,Alu
chr1	45975358	A	G	0.00807	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr1	47140872	T	C	0.00081	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr1	19954014	G	T	0.00055	MINOS1,MINOS1-NBL1	+	FALSE	L2c	SINE,Alu
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	17802976	T	C	0.00146	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	26138358	C	T	0.00645	SEPN1	+	FALSE
chr19	57804719	A	C	0.00361	ZNF460	+	FALSE
chr2	99813003	A	G	2.46688E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr19	36033460	C	T	0.00622	GAPDHS,TMEM147-AS1	+,-	FALSE
chr1	31905906	T	A	0.00092	SERINC2	+	FALSE
chr7	143003523	T	G	2.48474E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr1	168213597	A	G	0.00481		.	FALSE	AluSx1	SINE,Alu
chr19	41097276	C	G	0.00188	SHKBP1	+	FALSE
chr1	118502732	C	T	0.00151	WDR3,SPAG17	+,-	FALSE
chr2	24225006	A	G	0.00141		.	FALSE	AluSx	SINE,Alu
chrX	119572534	C	A	0.00387	LAMP2	-	FALSE
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr13	30780287	C	T	0.00748	KATNAL1	-	FALSE	AluSx1	SINE,Alu
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr6	150046495	T	C	0.00076	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	87572817	C	T	0.00514	HS2ST1	+	FALSE
chr15	40462780	G	A	0.00251	BUB1B	+	FALSE
chrM	9756	G	A	0.00315		.	FALSE
chr3	98541116	G	A	1.05300E-07	DCBLD2	-	FALSE
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	38001685	T	C	0.00050	SNIP1	-	TRUE	AluSx	SINE,Alu
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr3	194789330	G	T	0.00699	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr1	203277253	A	G	0.00624	BTG2	+	FALSE
chr2	11323106	G	T	0.00860	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	1421186	C	T	0.00834	ATAD3B	+	FALSE
chr1	244871041	T	A	0.00590	DESI2	+	FALSE
chr4	1193026	A	G	0.00471	SPON2,LOC100130872	-	FALSE	AluSp	SINE,Alu
chr1	28825465	A	G	0.00496	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr3	10192717	A	G	3.16601E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	31192650	T	G	0.00727	MATN1,MATN1-AS1	+,-	FALSE
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr12	56345408	T	G	0.00885	DGKA	+	FALSE
chr1	36522603	A	G	0.00012		.	FALSE	AluSc	SINE,Alu
chr1	32799434	C	T	0.00227	MARCKSL1	-	FALSE
chr2	109401284	G	C	0.00059	RANBP2	+	FALSE
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr1	32799508	A	C	8.53764E-05	MARCKSL1	-	FALSE
chr2	55516938	A	T	0.00265	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	152884247	A	G	0.00642	IVL	+	FALSE
chr2	242291743	A	G	0.00731	SEPT2	+	FALSE
chr1	12058869	C	T	0.00027	MFN2	+	FALSE
chr1	28825760	A	G	0.00802	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr19	10602447	C	T	0.00878	KEAP1	-	FALSE
chr7	77409288	A	G	7.47972E-05		.	FALSE	AluSc	SINE,Alu
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr11	111930765	T	C	0.00764	DLAT	+	FALSE
chr1	19543349	T	C	2.12419E-08	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	154323557	C	T	0.00018	ATP8B2	+	FALSE
chr7	152551581	T	A	0.00313	ACTR3B	+	FALSE
chr1	184761312	T	C	0.00077	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	20982216	T	A	0.00065	DDOST	-	FALSE
chr1	145511988	A	G	0.00900	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr5	81571875	A	T	0.00027	RPS23	-	FALSE
chr2	232196570	A	G	0.00765	ARMC9	+	FALSE
chr21	34728095	A	G	8.47848E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	145509570	A	G	0.00037	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	20978324	T	G	0.00153	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr8	26492397	C	T	0.00709	DPYSL2	+	FALSE
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	38971635	C	G	0.00011	SRSF7	-	FALSE
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr1	25893927	A	G	0.00081	LDLRAP1	+	FALSE
chr1	155161737	G	C	0.00482	MUC1	-	FALSE
chr1	121133779	C	G	2.29819E-05	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	36068166	T	C	0.00686	PSMB2	-	TRUE	AluSc	SINE,Alu
chr11	94606941	T	C	0.00699	AMOTL1	+	FALSE
chr1	9163334	T	C	0.00074		.	FALSE	AluSp	SINE,Alu
chr1	115259768	T	C	0.00156	CSDE1	-	FALSE
chr1	67451522	A	T	0.00883	MIER1	+	FALSE
chr3	45721827	C	A	0.00142	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr19	17535871	A	C	0.00948	MVB12A	+	FALSE
chr5	133918134	G	T	0.00404	JADE2	+	FALSE
chr1	19543799	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	179117128	T	C	0.00276	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	35644503	T	A	0.00551	SFPQ	-	FALSE
chr3	10290507	G	C	0.00367	TATDN2	+	FALSE
chr1	201846632	C	T	7.46598E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr3	42253664	C	T	0.00065	TRAK1	+	FALSE
chr1	113212984	C	T	7.79033E-05	CAPZA1	+	FALSE	(T)n	SINE,Alu
chr4	24801315	G	A	9.79732E-09	SOD3	+	FALSE
chr4	6710356	T	C	0.00046	MRFAP1L1	-	FALSE
chr5	140798639	G	C	3.89156E-05	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7	+	FALSE
chr1	65298625	G	A	0.00761	RAVER2	+	FALSE	X12_DNA	SINE,Alu
chr2	206983115	T	C	0.00992		.	FALSE	AluJb	SINE,Alu
chrX	106184603	A	T	0.00717	MORC4	-	FALSE	(GA)n	SINE,Alu
chr1	16926980	T	C	0.00062	NBPF1	-	FALSE
chr1	155181396	A	G	0.00209	MTX1	+	FALSE
chr19	19791650	A	G	1.64958E-05	ZNF101	+	TRUE	AluSc	SINE,Alu
chr1	53288862	A	G	0.00570	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	175126524	T	C	0.00901	KIAA0040	-	FALSE
chr16	10624966	T	C	3.33519E-08	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	24288535	A	T	0.00271	PNRC2	+	FALSE
chr1	19199221	C	T	0.00095	ALDH4A1	-	FALSE
chr1	41236854	T	A	0.00075	NFYC	+	FALSE	(T)n	SINE,Alu
chr1	156495520	T	A	0.00048	IQGAP3	-	FALSE
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr6	26368938	C	T	0.00121	BTN3A2	+	FALSE
chr3	120113286	C	T	1.47726E-06	FSTL1	-	FALSE
chr1	25688276	A	G	0.00015	TMEM50A	+	FALSE
chr7	65618870	A	G	0.00097	CRCP	+	TRUE	AluSx3	SINE,Alu
chr2	20648961	T	C	0.00304	RHOB	+	FALSE
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr16	48387296	A	G	0.00058	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	10517273	T	C	0.00583		.	FALSE	AluJr	SINE,Alu
chr2	39009425	A	G	0.00607		.	FALSE	AluSx3	SINE,Alu
chr4	2940434	T	C	1.52137E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr1	6283418	T	C	0.00464	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	36755235	A	G	0.00562	THRAP3	+	FALSE
chr19	57804362	G	A	0.00191	ZNF460	+	FALSE
chr3	10192825	A	G	0.00042	VHL	+	TRUE	AluSx1	SINE,Alu
chr10	13234356	A	T	3.19668E-07	MCM10	+	FALSE
chr1	114940216	T	G	0.00074	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	204521159	A	G	0.00158	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	16889864	C	A	0.00094	NBPF1	-	FALSE
chr1	179044100	A	G	0.00081	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	6582701	T	C	1.54245E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr3	195395402	C	A	0.00066	SDHAP2	+	FALSE
chr1	145513114	A	G	0.00026	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	188330198	C	A	0.00091	TFPI	-	FALSE	AluJb	SINE,Alu
chr17	26672363	G	A	0.00599	TNFAIP1	+	FALSE
chr1	1595603	C	G	0.00017	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	16890639	C	T	5.60894E-05	NBPF1	-	FALSE
chr2	217366197	T	A	0.00018		.	FALSE
chr1	145369589	T	C	0.00128	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	10518756	T	C	0.00600		.	FALSE	AluSx1	SINE,Alu
chr10	71993094	T	G	0.00078	PPA1	-	FALSE
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	6282295	T	C	0.00060	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	53289547	A	G	0.00646	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr1	65298791	A	T	0.00242	RAVER2	+	FALSE
chr4	155457049	T	A	0.00434	PLRG1	-	FALSE	L2d2	SINE,Alu
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr1	95712458	C	A	0.00135	RWDD3	+	FALSE
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr1	27733305	A	C	0.00374	WASF2	-	FALSE
chr1	28824041	T	A	0.00872	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr1	244572645	T	G	0.00218	ADSS	-	FALSE
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr3	42266349	C	T	0.00942	TRAK1	+	FALSE
chr5	478174	C	T	0.00392	SLC9A3,LOC100288152	+,-	FALSE
chr1	144053664	A	C	0.00050		.	FALSE
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chr1	1593828	G	C	0.00348	CDK11B,SLC35E2B	-	FALSE
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr2	68402152	T	C	0.00794	PNO1	+	FALSE
chr1	1337736	C	G	0.00012	MRPL20	-	FALSE
chr19	3465142	T	C	0.00100	NFIC	+	FALSE
chr6	35259646	G	C	0.00808	ZNF76	+	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr3	45721990	A	G	0.00779	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr3	152883475	A	T	0.00384	RAP2B	+	FALSE
chr1	19542458	T	C	7.14858E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	67874252	C	A	0.00558	SERBP1	-	FALSE
chr1	46662492	G	A	9.93078E-05	POMGNT1	-	FALSE
chr3	195461463	A	G	0.00609		.	FALSE	AluJb	SINE,Alu
chr1	11190646	G	A	0.00644	MTOR	-	FALSE
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr1	26143726	G	T	0.00556	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	160231910	A	T	0.00051	DCAF8	-	FALSE
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr1	152552285	C	A	0.00400	LCE3D	-	FALSE
chr7	107789927	T	C	0.00111	NRCAM	-	FALSE
chr1	16945570	A	G	0.00157	CROCCP2	-	FALSE
chr1	12401868	A	C	0.00394	VPS13D	+	FALSE
chr5	138705183	T	A	9.01084E-05	PAIP2,SLC23A1	+,-	FALSE
chr1	36644564	C	T	1.56500E-06	MAP7D1	+	FALSE
chr7	100804430	C	T	0.00629	AP1S1	+	FALSE
chr17	48771484	C	A	0.00737	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	89887603	C	T	0.00308	GBP1P1	+	FALSE
chr3	169810030	T	C	0.00659	PHC3	-	TRUE	AluSx	SINE,Alu
chr1	19238556	G	A	6.03260E-07	IFFO2	-	FALSE
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr1	59142713	T	C	0.00246	MYSM1	-	FALSE
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr3	97591153	C	T	0.00866	CRYBG3	+	FALSE
chr1	36068243	T	C	0.00217	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	2940438	T	C	0.00151	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr8	30536544	T	C	0.00122	GSR	-	TRUE	AluSp	SINE,Alu
chr1	566678	C	T	0.00559		.	FALSE
chr1	226171400	T	C	0.00359	SDE2	-	TRUE	BC200	SINE,Alu
chr1	20945264	A	C	0.00605	CDA	+	FALSE
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr17	34942575	G	A	0.00374	GGNBP2	+	FALSE	A-rich	SINE,Alu
chr17	41144248	T	G	0.00132	RUNDC1	+	FALSE
chr1	220231370	T	C	0.00826	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	16841620	T	A	0.00023		.	FALSE
chr10	13320123	C	A	0.00830	PHYH	-	FALSE
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chrX	77083982	T	C	0.00086	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	10520331	C	T	0.00060		.	FALSE	AluSx1	SINE,Alu
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE
chrX	16781156	A	G	0.00061		.	FALSE	AluJo	SINE,Alu
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr1	6283305	T	C	0.00554	ICMT	-	TRUE	AluSx3	SINE,Alu
chr9	9442082	T	G	0.00052	PTPRD	-	FALSE	7SLRNA	SINE,Alu
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr4	79832870	A	T	0.00655	BMP2K	+	FALSE
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr1	156878044	G	A	9.48586E-05	PEAR1	+	FALSE
chr1	121133733	G	A	0.00552	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	9162234	T	C	0.00896		.	FALSE	AluSx	SINE,Alu
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr1	31532379	A	G	0.00092	PUM1	-	FALSE
chr1	1656557	T	C	0.00012	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr11	68523567	T	C	0.00079	CPT1A	-	TRUE	AluSq	SINE,Alu
chr1	145512024	A	G	0.00836	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr2	37331038	T	C	4.65669E-05		.	FALSE	AluSx1	SINE,Alu
chr1	225706943	C	T	0.00229	ENAH	-	FALSE
chr8	37717121	C	A	0.00087	RAB11FIP1	-	FALSE
chr1	143399333	T	A	0.00339		.	FALSE	L1MC4	SINE,Alu
chr1	230979247	G	A	0.00137	C1orf198	-	FALSE
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr5	133918133	A	C	0.00413	JADE2	+	FALSE
chr1	9162224	T	C	0.00372		.	FALSE	AluSx	SINE,Alu
chr1	241796948	T	C	0.00082	OPN3,CHML	-	FALSE
chr8	62538200	A	T	0.00552	ASPH	-	FALSE
chr2	207174868	G	A	1.60070E-05	ZDBF2	+	FALSE
chr1	77759578	A	G	0.00031	AK5	+	FALSE
chr4	177252238	A	G	9.63526E-05	SPCS3	+	TRUE
chr4	17803568	T	C	0.00044	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr2	37429677	A	G	0.00279	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr2	132481245	T	G	0.00382	C2orf27A	+	FALSE
chr7	17384440	A	G	0.00271	AHR	+	TRUE	AluSx	SINE,Alu
chr3	15113716	T	C	2.87067E-10	RBSN	-	TRUE	AluSz6	SINE,Alu
chr3	15114395	T	C	0.00333	RBSN	-	TRUE	AluY	SINE,Alu
chr21	33974088	A	G	0.00057	C21orf59	-	FALSE
chr3	158547143	G	A	0.00178	MFSD1	+	FALSE
chr1	179042701	A	G	0.00132	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	6582176	T	C	0.00893	NOL9	-	TRUE	AluSq4	SINE,Alu
chr7	197428	G	A	3.11254E-09	FAM20C	+	FALSE
chr1	118167515	C	T	0.00852	FAM46C	+	FALSE
chr1	16889624	T	C	0.00794	NBPF1	-	TRUE
chr1	1653093	A	G	0.00642	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	20238573	T	C	0.00204	OTUD3	+	FALSE
chr16	75479474	T	C	2.06057E-06	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	100657416	C	T	0.00102	DBT	-	FALSE	AluJb	SINE,Alu
chr1	149913727	T	C	0.00721	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	145291217	C	T	0.00415	NBPF20	+	FALSE
chr1	32631809	C	T	1.50957E-07	KPNA6	+	FALSE
chr1	110913120	C	T	0.00627	SLC16A4	-	FALSE
chr1	85785550	C	A	0.00156	DDAH1	-	FALSE
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr12	133298121	A	G	0.00026	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	160966376	T	C	0.00996	F11R	-	TRUE	AluSg	SINE,Alu
chr13	32973012	A	C	0.00231	BRCA2	+	FALSE
chrX	24095065	G	T	0.00291	EIF2S3	+	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr1	54691921	G	A	0.00909	SSBP3	-	FALSE
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	40537923	G	A	6.08919E-05	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	19542310	T	C	0.00581	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	183547227	T	C	7.80232E-05	PARL	-	FALSE
chr3	20025662	T	G	0.00028	RAB5A,PP2D1	+,-	FALSE
chr1	93827990	C	A	0.00517	DR1	+	FALSE
chr1	40307166	G	A	0.00026	TRIT1	-	FALSE
chr7	38764459	T	C	0.00789	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	85647107	T	C	0.00255	SYDE2	-	TRUE	AluSx	SINE,Alu
chr4	103809324	A	C	0.00658	CISD2,SLC9B1	+,-	FALSE
chr1	94351063	A	T	0.00907	GCLM	-	FALSE
chr1	233086456	T	C	0.00344	NTPCR	+	FALSE
chr1	33149400	A	G	0.00026	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	197128726	G	A	2.50329E-05	ZBTB41	-	FALSE
chr7	157129834	C	G	1.26796E-05	DNAJB6	+	FALSE
chr12	125511312	A	G	0.00638	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	10440643	A	G	0.00055	KIF1B	+	TRUE	AluSx	SINE,Alu
chr3	10193732	A	G	0.00472	VHL	+	TRUE	AluJr	SINE,Alu
chr2	11323276	T	C	0.00219	ROCK2	-	FALSE
chr1	21795388	A	G	0.00732	NBPF3	+	FALSE
chrX	16782911	A	G	0.00051		.	FALSE	AluJb	SINE,Alu
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr1	569983	G	A	0.00568		.	FALSE
chr1	11901592	T	C	0.00076	CLCN6,NPPA-AS1	+	FALSE
chrX	133930368	T	G	0.00126	FAM122B	-	FALSE	G-rich	SINE,Alu
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr16	81064492	A	G	0.00935	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	9328243	A	G	0.00616	H6PD	+	TRUE	AluJr	SINE,Alu
chr17	65334766	T	C	4.45484E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr3	24019989	C	T	0.00339	NR1D2	+	FALSE
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr3	10192633	A	G	8.20807E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr1	78029905	T	A	0.00256	ZZZ3	-	FALSE
chr15	28502279	A	G	0.00120	HERC2	-	FALSE
chr1	120164552	G	A	0.00023	ZNF697	-	FALSE
chr19	19793795	A	G	0.00030	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	10521238	T	C	0.00232	DFFA	-	TRUE	AluY	SINE,Alu
chr1	28834154	G	T	0.00012	SNHG3,RCC1	+	FALSE	AluSg	SINE,Alu
chr1	20510981	G	C	0.00197	UBXN10-AS1	-	FALSE
chr1	16912014	A	C	0.00702	NBPF1	-	FALSE
chr1	53291425	A	G	0.00034	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	145689492	A	G	0.00075	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr12	72096330	A	G	0.00014	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	152187183	C	A	0.00373	HRNR	-	FALSE
chr3	57612314	T	C	0.00529	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	1594498	C	T	0.00024	CDK11B,SLC35E2B	-	FALSE
chr1	10520683	T	C	0.00457	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	17314702	C	T	0.00140	ATP13A2	-	FALSE
chr1	120695202	C	A	0.00033		.	FALSE
chr1	10521238	T	C	0.00793	DFFA	-	TRUE	AluY	SINE,Alu
chr1	168218735	A	G	0.00924		.	FALSE	AluSz	SINE,Alu
chr4	129795661	A	T	0.00165	JADE1	+	FALSE
chr1	3371371	C	G	0.00367	ARHGEF16	+	FALSE
chr5	79923990	T	C	0.00812	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	6583066	T	C	0.00088	NOL9	-	TRUE	AluSx4	SINE,Alu
chr22	44890573	T	C	1.87764E-05	LDOC1L	-	FALSE
chr1	32953214	A	G	0.00837	ZBTB8B	+	TRUE	AluSz	SINE,Alu
chr2	37327677	T	C	0.00016		.	FALSE
chr1	16913612	G	A	0.00581	NBPF1	-	FALSE
chr3	15112398	T	C	2.78799E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr12	64844149	A	G	0.00456		.	FALSE	AluJr4	SINE,Alu
chr7	138740037	G	C	0.00598	ZC3HAV1	-	FALSE
chr2	206986291	T	C	0.00143		.	FALSE	AluSz	SINE,Alu
chr5	118175182	T	C	0.00205	DTWD2	-	TRUE	AluJr	SINE,Alu
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr14	53242652	T	C	0.00081	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	36067817	T	C	0.00339	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	2115914	G	T	0.00970	PRKCZ,FAAP20	+,-	FALSE
chr19	1863170	G	A	0.00204	KLF16	-	FALSE
chr1	16577794	C	T	0.00805	FBXO42	-	FALSE
chr1	9161199	T	C	0.00468		.	FALSE	AluSx	SINE,Alu

RBP	RBM3
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR675KPR
Platform	HiSeq
Pubmed ID	32252787

RBM3 - Target Gene Network