RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr1	32638906	C	T	5.73102E-10	KPNA6	+	FALSE
chr2	37328034	T	C	8.99638E-05		.	FALSE
chr1	226172221	T	C	0.00118	SDE2	-	FALSE	L1MEf	SINE,Alu
chr8	95804615	A	G	0.00968	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr3	160283126	A	C	0.00564	KPNA4	-	FALSE
chr5	38904482	G	A	0.00048	OSMR	+	FALSE
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr1	36770065	C	T	0.00131	THRAP3	+	FALSE	(T)n	SINE,Alu
chr16	22296860	A	G	0.00041	EEF2K	+	TRUE	AluJo	SINE,Alu
chr1	145290874	C	T	0.00380	NBPF20	+	FALSE
chr3	98299365	T	G	3.92075E-11	CPOX	-	FALSE
chr2	206983797	T	C	0.00145		.	FALSE	AluSx	SINE,Alu
chr2	37330435	T	C	0.00401		.	FALSE	AluSq2	SINE,Alu
chr1	226923264	G	A	0.00046	ITPKB	-	FALSE
chr1	2121118	C	T	0.00234	FAAP20	-	FALSE
chr9	125609943	A	G	0.00247		.	FALSE
chr1	225707042	T	C	4.11654E-05	ENAH	-	FALSE
chr1	2113565	T	G	0.00429	PRKCZ	+	FALSE
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr1	6582527	T	C	0.00139	NOL9	-	TRUE	AluSx1	SINE,Alu
chr9	132266644	A	G	0.00081	LINC00963	+	TRUE	AluSx	SINE,Alu
chr2	86272758	G	A	0.00489	POLR1A	-	FALSE
chr1	45975358	A	G	0.00339	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr8	100890423	C	A	0.00113	COX6C	-	FALSE
chr1	148753279	G	T	0.00358		.	FALSE
chr3	75474643	T	C	0.00850	FAM86DP	-	TRUE	AluJo	SINE,Alu
chr1	214524496	T	C	0.00879	PTPN14	-	TRUE	AluSg	SINE,Alu
chr11	63394016	T	C	0.00106	ATL3	-	FALSE
chr1	87328400	C	T	0.00755	SEP15	-	FALSE
chr1	214529170	T	C	0.00120	PTPN14	-	TRUE
chr2	73957124	A	G	2.00679E-05	TPRKB	-	FALSE
chr1	10517314	T	C	0.00617		.	FALSE	AluJr	SINE,Alu
chr5	122165482	C	T	0.00367	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	160967938	T	C	0.00270	F11R	-	TRUE	AluSp	SINE,Alu
chr1	9163290	T	C	0.00016		.	FALSE	AluSp	SINE,Alu
chr1	179044181	A	G	0.00083	FAM20B	+	TRUE	AluSx	SINE,Alu
chr11	6703162	A	T	0.00726	MRPL17	-	FALSE
chr1	220231455	T	C	0.00274	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr4	169911126	C	A	0.00122	CBR4	-	FALSE
chr3	5258985	T	C	0.00436	EDEM1	+	FALSE
chr1	19542354	T	C	0.00684	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	16933135	G	T	0.00937	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	53291425	A	G	0.00034	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	20238574	C	T	6.32696E-05	OTUD3	+	FALSE
chr11	67782827	G	A	0.00163	ALDH3B1	+	FALSE
chr6	42857057	A	G	0.00020	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	9643873	A	G	0.00064		.	FALSE	AluY	SINE,Alu
chr1	200522059	A	T	0.00163	KIF14	-	FALSE	AluSg	SINE,Alu
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chr1	109535116	G	A	0.00013	WDR47	-	FALSE
chr8	57872143	C	T	0.00037	IMPAD1	-	FALSE
chr17	45219755	G	T	0.00592	CDC27	-	FALSE
chr5	35878249	G	A	0.00421	IL7R	+	FALSE
chr1	20809386	T	G	0.00561	CAMK2N1	-	FALSE
chr1	145511983	A	G	0.00596	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	157963370	C	G	0.00445	KIRREL	+	FALSE
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr2	114220055	T	C	9.23000E-05	CBWD2	+	FALSE
chr1	19543457	T	C	0.00012	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	35647099	A	G	0.00092	SFPQ	-	FALSE
chr1	47840938	A	G	0.00089	CMPK1	+	FALSE
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr16	747231	T	G	0.00269	FBXL16	-	FALSE
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr17	31258352	G	A	0.00417	TMEM98	+	FALSE
chr1	33148196	A	G	0.00054	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr7	128169979	T	G	0.00569		.	FALSE
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr10	98281480	T	A	0.00620	TM9SF3	-	FALSE
chr2	10198113	C	A	0.00893	CYS1	-	FALSE
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr12	57923211	A	C	0.00071	MBD6	+	FALSE	(C)n	SINE,Alu
chr1	201846635	A	T	0.00293	IPO9	+	FALSE	(CA)n	SINE,Alu
chr2	24522807	C	T	0.00079	ITSN2	-	FALSE
chr2	178086786	A	G	0.00305	HNRNPA3	+	FALSE
chr16	10625414	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	144821888	C	G	0.00093	NBPF20,NBPF9	+	FALSE
chr3	195694465	T	C	0.00300	SDHAP1	-	FALSE
chr1	10520378	T	C	0.00047		.	FALSE	AluSx1	SINE,Alu
chr1	144601045	C	T	0.00623	NBPF20	+	FALSE	L1MC2	SINE,Alu
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr3	181431106	C	G	0.00542	SOX2-OT,SOX2	+	FALSE
chr9	100777799	G	A	0.00675	ANP32B	+	FALSE
chr2	174090928	G	C	0.00852	ZAK,MLK7-AS1	+,-	FALSE
chr19	57804362	G	A	0.00191	ZNF460	+	FALSE
chr16	81064629	A	G	6.04166E-07	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	89447839	C	G	0.00808	KYAT3,RBMXL1	-	FALSE
chr1	160967855	T	C	0.00548	F11R	-	TRUE	AluSp	SINE,Alu
chr3	112319504	T	C	0.00040	LINC01279	-	TRUE	AluJb	SINE,Alu
chr1	27434251	G	A	0.00504	SLC9A1	-	FALSE
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr1	110551680	C	T	0.00415	AHCYL1	+	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr1	65694080	C	T	0.00442	AK4	+	FALSE	(TCCC)n	SINE,Alu
chr2	61386572	C	G	0.00821	C2orf74	+	FALSE	AluSz	SINE,Alu
chr2	70677439	A	G	0.00498	TGFA	-	FALSE
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr12	98943033	A	G	0.00346	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	144851999	A	C	0.00385	NBPF20,PDE4DIP	+,-	FALSE
chr4	178281754	G	A	0.00057	NEIL3	+	FALSE
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr1	109465171	T	A	0.00989	GPSM2	+	FALSE
chr1	33071096	A	G	0.00238	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	9160989	T	C	0.00092		.	FALSE	AluJb	SINE,Alu
chr1	23408016	C	A	4.80633E-05	KDM1A	+	FALSE
chr1	20976759	C	T	2.31016E-05	PINK1,PINK1-AS	+,-	FALSE
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr1	10517314	T	C	8.82505E-05		.	FALSE	AluJr	SINE,Alu
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr4	177252238	A	G	3.85736E-09	SPCS3	+	TRUE
chr4	39550715	T	C	0.00995	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr9	136209402	A	G	0.00431	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr6	74346347	A	G	4.16931E-07	SLC17A5	-	FALSE
chr1	32373837	G	T	0.00681	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	16957414	C	T	0.00116		.	FALSE
chr3	160286646	C	T	0.00086		.	FALSE
chr13	114748384	C	T	0.00050	RASA3	-	FALSE
chr1	1419678	A	G	0.00558	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr9	137330713	T	G	0.00021	RXRA	+	FALSE
chr2	132049924	A	G	0.00338	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr1	142688506	T	C	0.00337		.	FALSE
chr2	37327666	T	C	0.00231		.	FALSE
chr2	11323078	C	T	0.00539	ROCK2	-	FALSE
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr1	22852880	G	C	0.00247	ZBTB40	+	FALSE
chr1	201846634	C	A	0.00852	IPO9	+	FALSE	(CA)n	SINE,Alu
chr5	6633042	C	T	0.00377	NSUN2	-	FALSE
chr10	89623860	C	G	0.00071	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr1	9161231	T	C	5.02708E-05		.	FALSE	AluSx	SINE,Alu
chr10	129216658	T	C	0.00710	DOCK1	+	FALSE
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr14	75202288	C	T	0.00706	FCF1	+	FALSE	AluSc	SINE,Alu
chr1	94335332	G	T	0.00973	DNTTIP2	-	FALSE
chr5	137842895	A	T	0.00038	ETF1	-	FALSE
chr6	13788297	T	C	0.00979	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr8	30536151	T	C	5.90006E-09	GSR	-	TRUE	AluJr	SINE,Alu
chr1	6695423	T	G	9.25675E-05	THAP3,DNAJC11	+,-	FALSE
chr8	12880299	A	G	1.70760E-05	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr15	90764219	G	A	0.00193	SEMA4B	+	FALSE
chr17	57279167	A	G	0.00071	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	144828688	C	T	0.00024	NBPF20,NBPF9	+	FALSE
chr1	15899630	T	C	0.00082	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr1	110564996	C	T	0.00926	AHCYL1	+	FALSE
chr7	38764464	T	C	0.00193	VPS41	-	TRUE	AluSp	SINE,Alu
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr1	21100856	A	C	0.00010	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	19934880	T	C	0.00456	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr5	37290335	T	C	1.49367E-06		.	FALSE	AluSz	SINE,Alu
chr1	53288862	A	G	0.00503	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	67874696	T	C	0.00012	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr8	145150065	G	C	0.00585	CYC1	+	FALSE
chr1	118071289	A	G	0.00023		.	FALSE
chr7	22983890	T	C	0.00097	FAM126A	-	FALSE
chr6	43582750	A	G	0.00844	POLH	+	TRUE	AluSx1	SINE,Alu
chr7	6063467	G	A	0.00620	EIF2AK1	-	FALSE
chr11	6478619	G	A	0.00656	TRIM3	-	FALSE
chr2	206981832	T	C	0.00251		.	FALSE	AluJb	SINE,Alu
chr1	179876988	C	G	0.00047	TOR1AIP1	+	FALSE
chr1	158067060	T	A	0.00114	KIRREL	+	FALSE
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr1	38155699	T	G	0.00734	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr19	42375602	A	G	0.00011		.	FALSE	AluSx	SINE,Alu
chr1	9161245	T	C	0.00480		.	FALSE	AluSx	SINE,Alu
chr17	58024275	A	G	0.00455	RPS6KB1	+	FALSE
chr1	145689568	A	G	0.00157	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	1647814	T	C	7.10450E-06	CDK11B,CDK11A	-	FALSE
chrX	123046772	A	G	0.00548	XIAP	+	TRUE	AluSz	SINE,Alu
chr5	37289051	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr11	119533724	C	G	0.00232	NECTIN1	-	FALSE
chr1	19953124	G	A	0.00137	MINOS1,MINOS1-NBL1	+	FALSE
chr6	32148031	A	G	1.10299E-06		.	FALSE
chr6	79595097	A	G	0.00712	IRAK1BP1	+	FALSE
chr2	191556842	T	A	0.00812	NAB1	+	FALSE
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr3	194999352	A	T	0.00482	ACAP2	-	FALSE
chr1	19810692	A	C	0.00069	CAPZB	-	FALSE
chr10	51943605	C	T	0.00508		.	FALSE	MLT1J	SINE,Alu
chr1	46075783	A	G	0.00755	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr1	1252513	T	C	0.00670	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr6	42047404	A	G	0.00182	TAF8	+	TRUE	AluSz6	SINE,Alu
chr7	156763332	A	G	0.00090	NOM1	+	TRUE	AluSx	SINE,Alu
chr2	20097874	T	C	0.00769	TTC32	-	FALSE
chr20	45839074	A	T	0.00019	ZMYND8	-	FALSE	(T)n	SINE,Alu
chr11	8707908	A	G	0.00262	RPL27A	+	TRUE	AluSx1	SINE,Alu
chr14	75202645	A	G	3.73418E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr11	94801640	A	C	0.00790	SRSF8	+	FALSE
chr15	93198678	T	C	0.00064	FAM174B	-	FALSE	(GCCGCT)n	SINE,Alu
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	27202901	T	C	0.00224		.	FALSE	AluSq2	SINE,Alu
chr1	33149408	A	G	0.00624	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	36642420	T	C	0.00358	MAP7D1	+	FALSE
chr1	10520145	T	C	0.00424		.	FALSE	AluSx	SINE,Alu
chr5	118731273	A	C	0.00843		.	FALSE
chr2	128063523	G	C	0.00174	MAP3K2	-	FALSE
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr3	99516962	C	A	2.05391E-14	MIR548G	-	FALSE
chr12	93192790	G	T	0.00161	EEA1	-	FALSE
chr9	116022896	T	C	9.26547E-05	SLC31A1	+	FALSE
chr3	45960557	C	T	1.72644E-06	FYCO1	-	FALSE
chr1	56961756	A	G	0.00682	PLPP3	-	FALSE
chr1	121115958	T	C	0.00147	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr1	38327545	T	C	0.00602	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	16787985	A	G	0.00053		.	FALSE	AluSz	SINE,Alu
chr1	143189473	C	A	0.00626	LOC102723769	-	FALSE
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	1653046	T	A	0.00986	CDK11B,CDK11A	-	FALSE
chr1	144931330	C	T	0.00295	NBPF20,PDE4DIP	+,-	FALSE
chr7	17384818	A	G	0.00241	AHR	+	TRUE	AluSc	SINE,Alu
chr1	16959698	G	A	0.00086		.	FALSE
chr2	73301687	G	A	0.00618	RAB11FIP5	-	FALSE
chr1	26158906	C	A	0.00362	MTFR1L,AUNIP	+,-	FALSE
chr3	15094061	G	A	0.00188	MRPS25	-	FALSE
chr3	40503561	A	T	0.00012	RPL14	+	FALSE
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr1	9160989	T	C	0.00495		.	FALSE	AluJb	SINE,Alu
chr2	206986949	T	C	0.00693		.	FALSE	AluJr	SINE,Alu
chr22	16148871	T	G	0.00071		.	FALSE	Tigger1	SINE,Alu
chr1	10520219	T	C	0.00201		.	FALSE	AluSx	SINE,Alu
chr5	115165591	T	C	0.00407	ATG12	-	TRUE	AluSq2	SINE,Alu
chr3	57126614	C	T	0.00358	IL17RD	-	FALSE	AluY	SINE,Alu
chr1	144917841	T	C	4.47769E-05	NBPF20,PDE4DIP	+,-	FALSE
chr3	14986452	T	C	0.00815	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr7	6063466	T	A	0.00153	EIF2AK1	-	FALSE
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr5	96429362	A	T	0.00907	LIX1	-	FALSE
chr1	206566948	G	A	0.00228	SRGAP2	+	FALSE
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr8	101269589	A	T	0.00281	RNF19A	-	FALSE
chr1	44035352	C	T	0.00170	PTPRF	+	FALSE
chr6	33281842	G	T	0.00514		.	FALSE
chr3	128215735	G	A	0.00734	GATA2-AS1	+	FALSE
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr1	172411496	A	G	0.00361	C1orf105,PIGC	+,-	FALSE
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr17	56081432	G	A	4.92367E-05	SRSF1	-	FALSE
chr1	40219280	T	C	0.00025	PPIE	+	FALSE
chr2	11323276	T	C	0.00219	ROCK2	-	FALSE
chr2	217366911	A	G	0.00449		.	FALSE	AluSz6	SINE,Alu
chr7	44841933	A	G	0.00192	PPIA	+	TRUE	AluSx	SINE,Alu
chr14	50320630	G	C	0.00316		.	FALSE	7SLRNA	SINE,Alu
chr1	114306369	A	T	0.00341	RSBN1	-	FALSE
chr16	87443734	C	T	0.00074	ZCCHC14	-	FALSE
chr3	10285030	G	A	0.00384	IRAK2	+	FALSE
chr9	132268942	A	G	0.00104	LINC00963	+	TRUE	AluYf1	SINE,Alu
chr2	223807622	G	T	0.00875	ACSL3	+	FALSE
chr1	16891365	G	A	1.42078E-05	NBPF1	-	FALSE
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr6	42856007	A	G	0.00212	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	67874731	T	C	0.00613	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr7	29962282	G	C	0.00023	SCRN1	-	FALSE
chr2	200792307	G	A	0.00596	C2orf69	+	FALSE
chr1	179813613	T	C	7.15786E-05	TOR1AIP2	-	FALSE
chr1	53711735	G	C	0.00884	LRP8	-	FALSE
chr1	148558269	A	G	0.00538	NBPF15	+	FALSE	AluJb	SINE,Alu
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	1252662	T	C	0.00136	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr5	115165731	T	C	0.00410	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	205684067	T	C	0.00499	NUCKS1	-	FALSE
chr3	45722047	A	G	0.00319	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	204162597	A	G	0.00296	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	159946750	G	A	0.00105	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	120267061	C	A	0.00181	PHGDH	+	FALSE
chr3	49051841	C	A	0.00132	WDR6	+	FALSE
chr1	148556726	G	T	0.00758		.	FALSE
chr6	166824702	C	T	0.00587	RPS6KA2	-	FALSE	(T)n	SINE,Alu
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr15	41590999	A	G	0.00049	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	3703611	A	C	0.00208	LRRC47	-	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr17	41133089	C	T	0.00179	RUNDC1	+	FALSE
chr1	145323668	G	C	0.00241	NBPF20,NBPF10	+	FALSE
chr1	100731820	G	A	0.00771	RTCA	+	FALSE
chr5	41917720	T	G	0.00727	C5orf51	+	FALSE
chr1	79110518	A	G	0.00997	IFI44L	+	FALSE
chr7	135291501	T	C	0.00627	NUP205	+	FALSE
chr1	207221096	G	A	0.00452	YOD1	-	FALSE
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr4	101946459	C	T	0.00245	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr1	46075777	A	G	0.00268	NASP	+	TRUE	AluSx4	SINE,Alu
chr7	6501831	T	A	0.00110	KDELR2	-	FALSE
chr1	11722688	G	A	0.00076	FBXO44	+	FALSE
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr3	195395399	G	A	0.00556	SDHAP2	+	FALSE
chrX	37699364	C	G	0.00695	DYNLT3	-	FALSE
chr1	148010972	A	G	0.00068	NBPF8	-	FALSE
chr1	47717189	A	G	0.00384	STIL	-	FALSE
chr1	10517525	T	C	0.00775		.	FALSE	AluSx1	SINE,Alu
chr5	14696117	T	C	0.00807	OTULIN	+	FALSE
chr1	145512166	T	A	0.00736	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr1	40538317	C	A	0.00178	CAP1	+	FALSE
chr1	19585903	G	A	0.00522	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	9160982	T	C	0.00695		.	FALSE	AluJb	SINE,Alu
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr1	1653046	T	A	0.00686	CDK11B,CDK11A	-	FALSE
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr1	16889413	T	C	0.00016	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	93827991	A	C	0.00533	DR1	+	FALSE
chr1	33148287	A	G	0.00052	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr4	1205667	A	C	0.00990	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr6	150047430	T	C	0.00568	NUP43	-	TRUE	AluSc	SINE,Alu
chr16	3207362	A	T	1.09222E-05		.	FALSE
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr1	86117191	T	C	1.34616E-06	ZNHIT6	-	TRUE	AluSg	SINE,Alu
chr1	142688599	A	G	0.00860		.	FALSE
chr6	160526905	C	A	0.00268	IGF2R	+	FALSE
chr3	122291688	A	G	0.00597	DTX3L	+	FALSE	AluSz	SINE,Alu
chr15	63363386	G	T	0.00116	TPM1	+	FALSE
chr1	1653093	A	G	0.00674	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	173864944	G	T	2.40127E-05		.	FALSE
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr1	160062340	G	A	0.00967	IGSF8	-	FALSE
chr7	33060946	A	G	0.00542	NT5C3A	-	FALSE
chr17	34942575	G	A	0.00374	GGNBP2	+	FALSE	A-rich	SINE,Alu
chr1	10521130	T	C	1.15946E-05	DFFA	-	TRUE	AluY	SINE,Alu
chr2	176792357	A	G	7.02808E-05	LNPK	-	FALSE
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr1	19513110	G	A	0.00189	UBR4	-	FALSE
chr8	30536152	T	C	0.00015	GSR	-	TRUE	AluJr	SINE,Alu
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr12	98943149	A	G	0.00019	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr5	177023119	T	A	0.00295	TMED9	+	FALSE
chr1	28662053	G	A	0.00158	MED18	+	FALSE	AluSq2	SINE,Alu
chr15	71124666	C	A	4.50846E-10	LARP6	-	FALSE
chr14	75202669	A	G	1.13156E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	71532815	G	A	0.00712	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr5	174956487	T	C	0.00457	SFXN1	+	FALSE

RBP	FASTKD2
Knock-Method	shRNA
RBP Family	RAP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR716WZH
Platform	HiSeq
Pubmed ID	32252787

FASTKD2 - Target Gene Network