RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16576295	G	A	0.00231	FBXO42	-	FALSE	A-rich	SINE,Alu
chr2	55516937	G	T	0.00250	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr4	2940164	T	C	0.00115	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr2	128951941	A	G	0.00624	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr3	122293773	A	T	0.00147	DTX3L	+	FALSE
chr15	42550349	A	C	0.00120	TMEM87A	-	FALSE
chr1	11782984	A	G	0.00542		.	FALSE	AluSx	SINE,Alu
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr3	45721934	A	G	0.00639	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr4	89181451	T	C	8.32748E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr4	128756579	A	G	0.00501		.	FALSE	AluSx	SINE,Alu
chr1	48764419	C	T	0.00478	SPATA6	-	FALSE
chr4	57801196	G	A	0.00485	REST	+	FALSE
chr5	478174	C	T	0.00392	SLC9A3,LOC100288152	+,-	FALSE
chr1	25890189	A	G	0.00961	LDLRAP1	+	FALSE
chr2	224622277	T	C	0.00138	AP1S3	-	TRUE	AluSx1	SINE,Alu
chr1	16200163	A	G	0.00112	SPEN	+	FALSE
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr8	12880381	A	G	0.00031	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr2	217366570	A	G	0.00332		.	FALSE	AluSz	SINE,Alu
chr1	19543457	T	C	0.00362	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	117532790	C	T	0.00981	PTGFRN	+	FALSE
chr5	79279310	T	A	0.00173	MTX3	-	FALSE
chr1	35646125	C	T	0.00027	SFPQ	-	FALSE
chr8	145159707	G	C	0.00158	MAF1	+	FALSE
chr6	34254565	A	T	0.00617		.	FALSE	(A)n	SINE,Alu
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr1	59249682	G	A	0.00074	JUN	-	FALSE
chr2	101893244	C	A	0.00332	RNF149	-	FALSE	(A)n	SINE,Alu
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr14	53242674	T	C	1.74446E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	145688664	A	T	0.00013	NBPF20,NBPF10,RNF115	+	FALSE
chr1	10520764	T	C	0.00501	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	32697071	C	A	0.00134	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	202984020	A	T	0.00842	TMEM183A,TMEM183B	+	FALSE
chr1	145283986	C	T	0.00814	NBPF20,NOTCH2NL	+	FALSE
chr1	16959698	G	A	0.00086		.	FALSE
chr6	150045926	T	C	0.00053	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	20976163	C	T	1.02809E-07	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	116234083	T	A	0.00477	VANGL1	+	FALSE
chr9	7798518	G	C	0.00423	TMEM261	-	FALSE
chr1	226923938	A	C	0.00160	ITPKB	-	FALSE
chr1	150771703	T	C	0.00500	CTSK	-	FALSE
chr1	1345051	A	G	0.00816		.	FALSE	AluSg	SINE,Alu
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	145323656	A	T	3.43611E-06	NBPF20,NBPF10	+	FALSE
chr1	1662547	T	C	0.00556	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	145112414	T	C	0.00079	NBPF20,SEC22B	+	FALSE
chr3	57611237	A	G	9.49839E-05	DENND6A,PDE12	+,-	FALSE
chr3	148748339	G	T	0.00666	HLTF	-	FALSE
chr2	61277775	A	G	0.00113	PEX13	+	TRUE	AluY	SINE,Alu
chr12	74934944	A	G	0.00094	ATXN7L3B	+	FALSE
chr1	234561498	T	C	2.33971E-05	TARBP1	-	FALSE
chr1	180859304	T	C	2.77658E-06	XPR1	+	FALSE
chr2	206987738	T	C	0.00859		.	FALSE	AluJb	SINE,Alu
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr2	29023121	G	T	0.00077	PPP1CB	+	FALSE
chr1	201846630	C	A	7.51318E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	28825331	A	G	0.00024	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	118409491	A	T	0.00471	GDAP2	-	FALSE	(A)n	SINE,Alu
chr11	65404870	C	T	0.00160	PCNX3	+	FALSE
chr1	10521162	T	C	0.00911	DFFA	-	TRUE	AluY	SINE,Alu
chr12	96661616	A	G	0.00057	ELK3	+	FALSE
chr1	89447856	A	G	0.00465	KYAT3,RBMXL1	-	FALSE
chr12	54526562	A	T	0.00119	LOC400043	+	FALSE	L2a	SINE,Alu
chr12	80168993	G	T	0.00513	PPP1R12A	-	FALSE
chr14	64152514	T	C	1.52259E-06	SGPP1	-	TRUE	(TA)n	SINE,Alu
chr12	53435276	T	G	4.45732E-05	EIF4B	+	FALSE
chr9	46687845	G	C	0.00389	FGF7P6,LOC554249,LOC102724238	+,-	FALSE
chr1	101443431	C	T	0.00013	SLC30A7	+	FALSE	AluSq2	SINE,Alu
chr19	58361328	G	C	0.00972	ZNF587	+	FALSE
chr4	17629377	A	G	0.00890		.	FALSE	AluSx3	SINE,Alu
chr3	56763316	G	A	0.00830	ARHGEF3	-	FALSE
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr5	68426312	G	A	0.00344	SLC30A5	+	FALSE
chr16	23582262	T	G	0.00101	UBFD1	+	FALSE
chr2	128604232	A	T	0.00652	POLR2D	-	FALSE
chr3	20025662	T	G	0.00028	RAB5A,PP2D1	+,-	FALSE
chr2	31491690	T	C	0.00335		.	FALSE
chr19	1457883	C	G	2.74690E-05	APC2	+	FALSE
chr12	125511404	A	G	0.00201	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	234744480	G	A	0.00409	IRF2BP2	-	FALSE
chr7	44841933	A	G	0.00192	PPIA	+	TRUE	AluSx	SINE,Alu
chr8	143744556	T	C	0.00586	JRK	-	TRUE	AluJr	SINE,Alu
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	94995653	A	C	0.00035	F3	-	FALSE	AluSx	SINE,Alu
chr3	148748197	T	A	0.00026	HLTF	-	FALSE
chr2	102484490	G	T	0.00635	MAP4K4	+	FALSE
chr1	45280109	A	G	0.00251		.	FALSE	AluYk3	SINE,Alu
chr3	88205579	G	T	2.47620E-05	C3orf38	+	FALSE
chr1	179326847	A	G	0.00512	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	12677547	G	A	0.00015	DHRS3	-	FALSE	(A)n	SINE,Alu
chr4	763539	G	C	0.00816	PCGF3	+	FALSE
chr1	114940216	T	G	0.00074	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	10043504	A	G	0.00213	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr1	6582353	T	C	0.00121	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	16909220	T	C	0.00029	NBPF1	-	FALSE
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr1	156613401	T	C	5.47226E-05	BCAN	+	FALSE
chr22	18571343	A	G	0.00501	PEX26	+	TRUE	AluSz	SINE,Alu
chr10	102308803	G	C	0.00324	HIF1AN	+	FALSE	(GT)n	SINE,Alu
chr1	6651456	A	G	0.00614	KLHL21	-	FALSE
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr1	36068369	T	C	0.00404	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	32638906	C	T	5.73102E-10	KPNA6	+	FALSE
chr5	139931626	T	G	0.00490	SRA1	-	FALSE
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr1	214524566	T	C	0.00040	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr1	54691921	G	A	0.00909	SSBP3	-	FALSE
chr2	9629953	C	A	0.00042	ADAM17	-	FALSE
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr3	45960562	T	A	2.01390E-05	FYCO1	-	FALSE
chr1	16269737	C	T	0.00816	ZBTB17	-	FALSE
chr14	57879959	G	A	0.00144		.	FALSE
chr5	125962086	A	G	0.00231	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	206566948	G	A	0.00568	SRGAP2	+	FALSE
chr1	28826023	A	G	0.00143	PHACTR4	+	FALSE	AluJb	SINE,Alu
chr2	132481480	T	C	0.00989	C2orf27A	+	FALSE
chr1	205719141	C	T	0.00021	NUCKS1	-	FALSE
chr1	16576295	G	A	0.00139	FBXO42	-	FALSE	A-rich	SINE,Alu
chr1	169101269	T	G	0.00207	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr1	1252652	T	C	0.00219	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	20826784	T	C	0.00204	MUL1	-	FALSE
chr1	9331101	A	G	0.00026	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	19543785	T	C	0.00492	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	9848198	G	T	0.00295	ARPC4,ARPC4-TTLL3	+	FALSE	(T)n	SINE,Alu
chr1	1656557	T	C	0.00061	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr5	79276281	A	G	0.00026	MTX3	-	FALSE
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr1	85786299	T	A	0.00502	DDAH1	-	FALSE
chr1	25889176	C	T	3.50303E-06	LDLRAP1	+	FALSE
chr1	16921146	T	C	0.00353	NBPF1	-	FALSE
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr14	23794557	T	A	0.00983	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr17	65334886	T	C	8.05380E-09	PSMD12	-	TRUE	AluSq	SINE,Alu
chr5	41917696	T	A	0.00045	C5orf51	+	FALSE
chr1	45976723	T	C	0.00340	MMACHC,PRDX1	+,-	FALSE
chr1	65299558	C	T	0.00162	JAK1	-	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr7	94060361	C	T	2.02320E-06	COL1A2	+	FALSE
chr5	79923788	T	C	0.00693	DHFR	-	TRUE	AluSp	SINE,Alu
chr15	41591039	A	G	0.00214	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	145513114	A	G	0.00026	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	15113842	T	C	0.00100	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr11	35017260	T	C	0.00224	PDHX	+	FALSE
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr3	99886662	G	A	0.00011	CMSS1	+	FALSE
chr16	19725719	C	T	0.00471	KNOP1	-	FALSE
chr1	569492	T	C	0.00743		.	FALSE
chr1	28800380	C	A	0.00709	PHACTR4	+	FALSE
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr8	94744813	C	T	5.22032E-05	RBM12B	-	FALSE
chr12	56215097	A	T	0.00051	DNAJC14	-	FALSE
chr3	188596752	A	G	0.00203	LPP	+	FALSE
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr2	74333235	C	T	0.00022	TET3	+	FALSE
chr1	65298791	A	T	0.00242	RAVER2	+	FALSE
chr1	6282383	T	C	0.00371	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr1	144615223	C	G	0.00324	NBPF20,NBPF9	+	FALSE
chr1	36787880	C	T	0.00023	EVA1B	-	FALSE
chr1	10519951	T	C	0.00499		.	FALSE	AluJr	SINE,Alu
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chrM	9756	G	A	0.00315		.	FALSE
chr1	114940216	T	G	0.00674	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	46032974	T	C	0.00196	AKR1A1	+	FALSE
chr4	2940371	T	C	0.00905	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	23835919	C	T	0.00872	E2F2	-	FALSE
chr1	148556784	G	A	0.00543		.	FALSE
chr1	16889138	T	C	0.00356	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr2	153483048	G	A	0.00740	FMNL2	+	FALSE
chr4	39460539	G	A	0.00323	RPL9	-	FALSE
chr9	125866242	T	G	0.00988	RABGAP1	+	FALSE	(TG)n	SINE,Alu
chr2	56611540	A	C	0.00198	CCDC85A	+	FALSE
chr3	5026729	C	T	0.00539	BHLHE40	+	FALSE
chr1	114940210	T	G	0.00028	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	19428086	G	T	0.00449	UBR4	-	FALSE
chr5	135515156	G	A	0.00364	SMAD5	+	FALSE
chr1	10517952	C	A	0.00341		.	FALSE
chr3	125248838	A	T	0.00899	OSBPL11	-	FALSE
chr1	114515903	C	T	0.00169	HIPK1	+	FALSE
chr8	98736864	T	A	0.00086	MTDH	+	FALSE
chr1	220231254	T	C	0.00376	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr19	8005999	T	C	0.00027	TIMM44	-	FALSE
chr3	101284940	T	C	1.85568E-05	TRMT10C	+	FALSE
chr1	6282401	T	C	0.00665	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	14986104	T	C	0.00307	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	1721936	G	A	0.00731	GNB1	-	FALSE
chr1	145689566	A	G	0.00331	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	16933583	T	C	0.00050	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr4	186081538	T	A	0.00077	CFAP97	-	FALSE
chr1	9162224	T	C	0.00124		.	FALSE	AluSx	SINE,Alu
chr2	37328075	T	C	0.00335		.	FALSE
chr1	160967833	T	C	0.00717	F11R	-	TRUE	AluSp	SINE,Alu
chr3	10193796	A	G	0.00493	VHL	+	TRUE	AluSx	SINE,Alu
chr1	41204569	C	T	0.00854	NFYC	+	FALSE
chr16	10625075	T	C	2.22045E-15	EMP2	-	TRUE	AluSx3	SINE,Alu
chr7	98258736	G	A	0.00348	NPTX2	+	FALSE
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	6282371	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr17	38798073	T	G	0.00692	SMARCE1	-	FALSE
chr2	56150885	G	A	0.00624	EFEMP1	-	FALSE
chr4	2940486	T	C	7.87098E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	33149496	A	G	0.00469	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr14	75202373	A	G	0.00019	FCF1	+	FALSE	AluSc	SINE,Alu
chr1	28564612	C	A	0.00714	ATPIF1	+	FALSE
chr15	42503335	T	C	0.00023	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr7	129472357	A	G	0.00287	UBE2H	-	FALSE
chr8	30536152	T	C	0.00015	GSR	-	TRUE	AluJr	SINE,Alu
chr1	31905882	A	C	0.00132	SERINC2	+	FALSE
chr1	145313405	C	T	0.00322	NBPF20,NBPF10	+	FALSE
chr1	117945049	G	A	0.00120	MAN1A2	+	FALSE
chr1	21808159	G	A	9.34000E-05	NBPF3	+	FALSE
chr19	42375549	A	G	4.56329E-05		.	FALSE	AluSx	SINE,Alu
chr1	19542239	T	C	0.00043	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	16529016	C	T	0.00024	ARHGEF19	-	FALSE
chr1	16893691	C	A	0.00141	NBPF1	-	FALSE
chr1	9160963	T	C	0.00354		.	FALSE	AluJb	SINE,Alu
chr1	46075663	A	G	0.00013	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	206986945	T	C	0.00414		.	FALSE	AluJr	SINE,Alu
chr1	134370	T	C	0.00327		.	FALSE	AluSg	SINE,Alu
chr1	35817022	T	A	0.00072	ZMYM4	+	FALSE
chr2	27293352	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chr3	128339057	A	T	0.00535	RPN1	-	FALSE	(A)n	SINE,Alu
chr15	82336939	G	A	2.47536E-05	MEX3B	-	FALSE
chr6	36894339	G	A	0.00650	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	10520174	T	C	0.00158		.	FALSE	AluSx	SINE,Alu
chr5	96498783	G	A	0.00056	RIOK2	-	FALSE
chr1	184761162	T	C	0.00685	FAM129A	-	TRUE	AluJo	SINE,Alu
chr3	33185522	C	A	1.53330E-10	CRTAP	+	FALSE	L2a	SINE,Alu
chr2	10198113	C	A	0.00893	CYS1	-	FALSE
chr1	58946773	C	T	0.00037	OMA1	-	FALSE
chr1	229762054	T	A	0.00084	URB2	+	FALSE
chr11	60658566	A	C	0.00387	PRPF19	-	FALSE
chr7	6066461	T	C	2.08606E-05	EIF2AK1	-	FALSE
chr4	71682341	T	C	0.00584	GRSF1	-	TRUE	AluSz6	SINE,Alu
chr3	196662641	T	C	0.00089	NCBP2	-	FALSE
chr5	179382563	T	C	0.00704	RNF130	-	FALSE
chr12	125511960	A	G	6.81205E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr15	59954723	T	A	0.00043	BNIP2	-	FALSE
chr1	201846616	C	G	0.00209	IPO9	+	FALSE	(CA)n	SINE,Alu
chr5	139680027	A	G	0.00155	PFDN1	-	FALSE
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr1	16344402	G	A	0.00168	HSPB7	-	FALSE	L3	SINE,Alu
chr1	37948912	C	T	0.00084	ZC3H12A	+	FALSE
chr1	16841561	G	A	0.00025		.	FALSE
chr10	121437033	T	G	0.00357	BAG3	+	FALSE
chr12	125512173	A	G	0.00285		.	FALSE	AluSx1	SINE,Alu
chr2	37331555	T	C	0.00171		.	FALSE	AluJb	SINE,Alu
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chr1	100548780	A	T	0.00791	MFSD14A	+	FALSE
chr2	37331531	T	C	0.00148		.	FALSE	AluJb	SINE,Alu
chr7	6063283	C	T	0.00032	AIMP2,EIF2AK1	+,-	FALSE
chr2	74442550	A	T	0.00826		.	FALSE
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chrX	77083982	T	C	0.00086	MAGT1	-	TRUE	AluSz	SINE,Alu
chr6	143832707	G	A	0.00418	FUCA2	-	FALSE	(GCA)n	SINE,Alu
chr14	75202856	A	G	3.12821E-09	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	1595586	T	C	0.00051	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	160967890	T	C	0.00876	F11R	-	TRUE	AluSp	SINE,Alu
chr18	10691357	G	A	0.00082	PIEZO2	-	FALSE
chr1	206566948	G	A	0.00879	SRGAP2	+	FALSE
chrX	77083828	T	C	1.52468E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr2	204301760	C	T	0.00313	RAPH1	-	FALSE
chrX	77083845	T	C	0.00102	MAGT1	-	TRUE	AluSz	SINE,Alu
chr3	44791554	T	C	7.29341E-07	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr3	42643425	G	A	0.00482	NKTR	+	FALSE	L2a	SINE,Alu
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr1	117645998	A	G	0.00057		.	FALSE
chr1	175914284	A	G	0.00036	RFWD2	-	FALSE
chr2	8996701	G	T	0.00063	MBOAT2	-	FALSE	AluSz	SINE,Alu
chr12	29493734	C	T	0.00163	ERGIC2	-	FALSE
chr3	37366459	C	A	2.94197E-05	GOLGA4	+	FALSE
chr19	9761591	T	C	0.00516	ZNF562	-	TRUE	AluSp	SINE,Alu
chr1	179829096	T	C	4.38746E-06	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	154557171	G	A	0.00045	ADAR	-	FALSE	A-rich	SINE,Alu
chr5	76371820	A	G	0.00162		.	FALSE
chr1	144594232	C	T	2.29859E-05	NBPF20	+	FALSE
chr3	48787684	T	C	0.00494	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	53716416	G	A	0.00967	LRP8	-	FALSE
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr3	122447574	A	C	0.00224	PARP14	+	FALSE
chr2	85548074	T	C	0.00428	TGOLN2	-	FALSE
chr4	109551185	G	A	0.00344	RPL34	+	FALSE
chr2	61705068	A	T	0.00103		.	FALSE
chr1	100488177	C	T	0.00080	SLC35A3	+	FALSE
chr5	130540368	A	C	0.00420	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr6	42856924	A	G	2.08684E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	47129284	A	G	0.00327	MCFD2	-	FALSE
chr2	242384368	G	A	0.00031	FARP2	+	FALSE	AluJr	SINE,Alu
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr2	96573123	C	T	0.00413	ANKRD36C	-	FALSE
chr3	14986111	T	C	0.00653	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr8	145159718	G	C	0.00409	MAF1	+	FALSE
chr16	747230	C	G	0.00269	FBXL16	-	FALSE
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr1	115313038	G	A	0.00144	SIKE1	-	FALSE
chr12	98942886	A	G	1.80851E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr1	229652587	T	C	0.00732	ABCB10	-	FALSE
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr2	55516891	G	A	2.12747E-05	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr4	57327082	A	G	0.00834	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	141667149	T	C	0.00273	TFDP2	-	TRUE	AluSx	SINE,Alu
chr1	148252049	A	C	0.00493	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	35652608	A	G	0.00026	SFPQ	-	FALSE
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr2	85772404	C	A	0.00015	GGCX	-	FALSE
chr1	1255412	C	A	0.00751	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr4	4864940	C	T	0.00247	MSX1	+	FALSE
chr1	148561090	G	A	0.00087	NBPF15	+	FALSE
chr1	16259813	A	G	0.00475	SPEN	+	FALSE
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr1	148577409	C	A	0.00897	NBPF15	+	FALSE
chr1	155853251	A	G	0.00207	SYT11	+	TRUE	AluJb	SINE,Alu
chr3	179042866	A	G	0.00806	ZNF639	+	FALSE	AluSp	SINE,Alu
chr1	36644564	C	T	1.56500E-06	MAP7D1	+	FALSE
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chrX	37699364	C	G	0.00695	DYNLT3	-	FALSE
chr9	34088016	G	A	0.00226	DCAF12	-	FALSE
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr1	86117191	T	C	1.34616E-06	ZNHIT6	-	TRUE	AluSg	SINE,Alu
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr1	28661692	A	G	2.56757E-06	MED18	+	TRUE	AluSg	SINE,Alu
chr1	45280099	A	G	0.00286		.	FALSE	AluYk3	SINE,Alu
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr1	9328086	G	A	0.00017	H6PD	+	FALSE	AluJr	SINE,Alu
chr1	12071680	A	G	0.00985	MFN2	+	FALSE
chr1	228880098	T	A	4.07865E-05	RHOU	+	FALSE
chr3	23962339	T	A	0.00925	RPL15	+	FALSE
chrX	123046290	A	G	0.00524	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	28661576	A	G	0.00021	MED18	+	TRUE	AluSg	SINE,Alu
chr1	156499969	T	C	8.53229E-06	IQGAP3	-	FALSE
chr1	203277243	G	T	1.60795E-05	BTG2	+	FALSE
chr22	36677549	C	T	0.00040	MYH9	-	FALSE
chr5	151041886	T	G	0.00269	SPARC	-	FALSE
chr1	45976269	C	G	0.00039	MMACHC	+	FALSE
chr6	74133913	T	C	0.00439		.	FALSE	AluY	SINE,Alu
chr1	20238572	A	T	0.00950	OTUD3	+	FALSE
chr1	156564754	A	G	0.00562	GPATCH4	-	FALSE
chr1	22854931	C	A	7.08508E-09	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr1	145282799	G	A	0.00915	NBPF20,NOTCH2NL	+	FALSE
chr2	161130867	C	A	0.00034	RBMS1	-	FALSE
chr1	117530273	A	G	0.00270	PTGFRN	+	FALSE
chr4	109551183	T	A	0.00270	RPL34	+	FALSE
chr1	1647814	T	C	0.00123	CDK11B,CDK11A	-	FALSE
chr4	185309401	A	G	0.00782	IRF2	-	FALSE
chr2	242447628	T	G	0.00020	STK25	-	FALSE
chr2	109383604	G	A	0.00331	RANBP2	+	FALSE
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr12	120898658	A	G	0.00372	GATC	+	TRUE	AluY	SINE,Alu
chr1	9324670	A	G	0.00734	H6PD	+	FALSE
chr1	6283434	T	C	4.87712E-06	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	114352238	G	A	1.72390E-05	WASH2P	+	FALSE
chr3	101405563	A	G	0.00511	RPL24	-	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr1	46075715	A	G	0.00401	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	145368837	C	A	4.93702E-07	NBPF20,NBPF10	+	FALSE
chr3	100467676	A	T	0.00067	TFG	+	FALSE
chr1	245006499	C	G	0.00238	COX20	+	FALSE
chr2	61369774	T	C	0.00267	LOC339803	-	TRUE	AluSx	SINE,Alu
chr1	9162348	T	C	0.00023		.	FALSE	AluSx	SINE,Alu
chr5	180682612	A	T	0.00235	CTC-338M12.4	+	FALSE
chr6	31626580	G	A	0.00291		.	FALSE
chr4	2940413	T	C	0.00311	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	118502732	C	T	0.00151	WDR3,SPAG17	+,-	FALSE
chr1	45244421	G	A	0.00925		.	FALSE
chr4	1006333	G	A	0.00117	FGFRL1	+	FALSE	(CTG)n	SINE,Alu
chr14	75202544	A	G	3.08187E-07	FCF1	+	TRUE	AluSc	SINE,Alu
chr5	44819912	A	G	0.00176		.	FALSE	AluSz	SINE,Alu
chr1	214524509	A	G	0.00471	PTPN14	-	FALSE	AluSg	SINE,Alu
chr1	39549983	G	A	0.00896	MACF1	+	FALSE
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr4	189026673	A	G	0.00994	TRIML2	-	FALSE
chr19	19792444	A	G	0.00686	ZNF101	+	TRUE	AluJb	SINE,Alu
chr10	17362784	A	G	0.00261	ST8SIA6	-	FALSE
chr17	65334766	T	C	4.45484E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	28826085	A	G	0.00196	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr15	85185205	T	C	0.00459	WDR73,SCAND2P	+,-	FALSE	FLAM_C	SINE,Alu
chr1	154320942	A	G	0.00579	ATP8B2	+	FALSE
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr9	140709880	C	T	0.00178	EHMT1	+	FALSE
chr1	93307477	A	G	6.92611E-06	FAM69A,RPL5	+,-	FALSE
chr1	168220529	A	G	0.00161		.	FALSE	AluSz6	SINE,Alu
chr5	179720333	A	G	0.00308		.	FALSE
chr2	37331119	T	C	0.00758		.	FALSE	AluSx1	SINE,Alu
chr1	43272841	A	T	0.00029	SVBP	-	FALSE
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr1	40537947	A	C	0.00295	CAP1	+	FALSE
chr15	78841543	T	A	0.00438	PSMA4	+	FALSE

RBP	HNRNPAB
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR354XQY
Platform	HiSeq
Pubmed ID	32252787

HNRNPAB - Target Gene Network