RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr4	57326291	A	G	0.00424	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	204521280	A	G	0.00519	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	27992825	G	A	0.00192	IFI6	-	FALSE
chr1	118066459	A	G	0.00360	MAN1A2	+	FALSE
chr1	146495577	T	A	0.00072	LOC728989	-	FALSE
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr1	109818151	T	C	0.00855	CELSR2	+	FALSE
chr4	56295160	T	A	0.00187	CLOCK	-	FALSE	(T)n	SINE,Alu
chr19	45406536	G	T	0.00518	TOMM40	+	FALSE
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr1	1252513	T	C	0.00043	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr3	98541116	G	A	1.05300E-07	DCBLD2	-	FALSE
chr1	33149443	A	G	2.90388E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	19585554	A	G	2.15626E-06	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr12	125512444	A	G	4.63106E-05		.	FALSE	AluY	SINE,Alu
chr1	19282314	G	T	0.00158	IFFO2	-	FALSE
chr1	10517952	C	A	0.00341		.	FALSE
chr2	37327662	T	C	0.00022		.	FALSE
chr3	195411498	G	A	0.00722	SDHAP2	+	FALSE
chr1	117645998	A	G	0.00434		.	FALSE
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr2	128603087	T	C	0.00036		.	FALSE	AluSp	SINE,Alu
chr7	79848337	G	A	0.00037	GNAI1	+	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	100490274	A	G	0.00234	SLC35A3	+	TRUE	AluSc5	SINE,Alu
chr10	121588038	A	C	0.00100	INPP5F	+	FALSE
chr2	86249840	T	C	0.00482	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	86117122	T	C	0.00462	ZNHIT6	-	FALSE	AluSg	SINE,Alu
chr1	230979207	C	A	0.00643	C1orf198	-	FALSE
chr1	158065762	C	T	0.00310	KIRREL	+	FALSE
chr1	150771703	T	C	0.00500	CTSK	-	FALSE
chr1	169101307	C	T	0.00405	ATP1B1	+	FALSE
chr10	75008846	T	C	0.00135	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	16894497	C	T	0.00454	NBPF1	-	FALSE
chr1	156564726	T	C	0.00995	GPATCH4	-	FALSE
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	178406764	C	T	0.00416	AGPS	+	FALSE
chr1	46830257	C	T	0.00208	NSUN4	+	FALSE	AluSx1	SINE,Alu
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr8	11701297	T	C	0.00288	CTSB	-	TRUE	AluSx1	SINE,Alu
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr1	33146255	C	A	0.00182	SYNC,RBBP4	+,-	FALSE
chr5	118729619	A	G	0.00586	TNFAIP8	+	FALSE
chr2	20097874	T	C	0.00769	TTC32	-	FALSE
chr1	155214017	C	A	0.00261	GBA	-	FALSE	AluSx3	SINE,Alu
chr8	30643549	G	C	0.00257	PPP2CB	-	FALSE
chr1	10517653	T	C	0.00475		.	FALSE	AluSx1	SINE,Alu
chr6	29857113	C	A	0.00582		.	FALSE
chr1	36068210	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	1252654	A	G	0.00125	CPSF3L	-	FALSE	AluSp	SINE,Alu
chr2	172412008	C	G	0.00982	CYBRD1	+	FALSE
chr1	9325676	C	T	9.85088E-06	H6PD	+	FALSE
chr1	10521162	T	C	0.00911	DFFA	-	TRUE	AluY	SINE,Alu
chr1	36067886	T	C	0.00150	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	10193796	A	G	0.00493	VHL	+	TRUE	AluSx	SINE,Alu
chr4	1066073	T	A	0.00387	RNF212	-	FALSE	L1MC1	SINE,Alu
chr4	183721749	G	A	0.00324	TENM3	+	FALSE
chr12	72096206	A	G	2.06003E-07	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr16	88789700	C	T	0.00703	PIEZO1	-	FALSE
chr1	233518885	T	C	0.00021	MLK4	+	FALSE	(TTTC)n	SINE,Alu
chr1	32508397	T	C	0.00166	KHDRBS1	+	FALSE
chr3	138121198	C	T	0.00076	MRAS	+	FALSE
chr1	17299387	T	A	0.00941	CROCC	+	FALSE
chr1	85787118	G	C	0.00104	DDAH1	-	FALSE
chr19	39433138	G	A	0.00276	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	154557171	G	A	0.00045	ADAR	-	FALSE	A-rich	SINE,Alu
chr3	45960578	G	A	0.00632	FYCO1	-	FALSE
chr1	20978457	T	C	0.00036	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr1	38279987	T	C	0.00980	MTF1	-	FALSE
chr4	10443062	T	G	0.00303	ZNF518B	-	FALSE
chr1	65692498	T	C	0.00356	AK4	+	FALSE	(T)n	SINE,Alu
chr1	15015	G	C	0.00809	WASH7P	-	FALSE
chr1	119693495	A	G	0.00996	LOC101929147	+	TRUE	AluSx	SINE,Alu
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr2	99772827	A	G	4.47582E-05	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	146650289	C	T	0.00736	PDIA3P1	+	FALSE
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr1	203713133	G	A	0.00984	ATP2B4	+	FALSE
chr1	120163520	T	C	0.00017	ZNF697	-	FALSE
chr16	603884	C	G	0.00118	CAPN15	+	FALSE
chr1	121133733	G	A	0.00467	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	26143725	A	T	0.00291	SEPN1	+	FALSE	AluSx	SINE,Alu
chr3	45125566	C	T	0.00000	CDCP1	-	FALSE	Charlie8	SINE,Alu
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	160659996	G	A	0.00177	LY75-CD302,LY75	-	FALSE
chr3	196670087	G	A	4.07177E-06	NCBP2-AS2	+	FALSE
chrX	118673382	T	C	0.00021	CXorf56	-	TRUE	AluSz	SINE,Alu
chr4	6718775	G	T	3.33433E-09	BLOC1S4	+	FALSE
chr1	90493918	G	A	0.00166	ZNF326	+	FALSE
chr1	179044100	A	G	0.00487	FAM20B	+	TRUE	AluSx	SINE,Alu
chr17	37006214	T	C	0.00706		.	FALSE	AluSx	SINE,Alu
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr2	74686329	C	T	0.00640	INO80B-WBP1,WBP1	+	FALSE
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	162354203	A	G	0.00956	C1orf226	+	FALSE
chr16	48387296	A	G	0.00058	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	116947126	C	A	4.37114E-09	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr17	17971644	G	T	0.00154	GID4	+	FALSE
chr1	16958063	C	T	0.00246		.	FALSE
chr1	6283439	T	C	0.00786	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr5	139931628	A	C	0.00804	SRA1	-	FALSE
chr1	16893813	A	G	7.34801E-05	NBPF1	-	FALSE
chr2	37331841	C	T	0.00179		.	FALSE	L1MC4	SINE,Alu
chr1	155695985	A	G	0.00031	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	33149400	A	G	0.00407	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	179117270	T	C	0.00478	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	6283296	T	C	0.00106	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr1	16893686	G	C	0.00138	NBPF1	-	FALSE
chr2	101893247	C	A	0.00237	RNF149	-	FALSE	(A)n	SINE,Alu
chr1	33147934	A	G	0.00251	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr1	19199221	C	T	0.00676	ALDH4A1	-	FALSE
chr1	16921146	T	C	0.00835	NBPF1	-	FALSE
chr6	42855979	A	G	8.12389E-06	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	44459935	T	C	0.00953	CCDC24	+	FALSE	AluJb	SINE,Alu
chr1	163116048	G	T	3.38683E-05	RGS5	-	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr8	12880299	A	G	1.70760E-05	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr1	1595078	T	C	0.00714	CDK11B,SLC35E2B	-	FALSE	AluSg	SINE,Alu
chr1	16889820	C	T	0.00012	NBPF1	-	FALSE
chr22	18572729	A	G	0.00228	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	16912029	C	G	0.00831	NBPF1	-	FALSE
chr1	33149400	A	G	0.00026	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	128756738	A	G	0.00408		.	FALSE	AluSx	SINE,Alu
chr1	156613401	T	C	5.47226E-05	BCAN	+	FALSE
chr2	70452144	T	G	0.00191	TIA1	-	FALSE
chr6	13788045	T	C	0.00157	MCUR1	-	TRUE
chr1	931939	G	A	0.00428		.	FALSE
chr17	57279281	A	G	0.00055	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	10518591	A	T	0.00811		.	FALSE
chr2	32534897	A	G	0.00680		.	FALSE	AluSx1	SINE,Alu
chr16	75479474	T	C	2.06057E-06	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr5	125961623	A	G	6.78430E-09	PHAX	+	TRUE	AluSz6	SINE,Alu
chr3	160283126	A	C	0.00564	KPNA4	-	FALSE
chr1	36770950	A	G	0.00118	THRAP3	+	FALSE
chr3	188603007	C	G	0.00785	LPP	+	FALSE
chr1	156692054	A	T	0.00471	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	3806074	G	A	0.00354	C1orf174	-	FALSE	AluSp	SINE,Alu
chr1	46075791	A	G	0.00120	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	53288897	A	G	0.00439	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr8	117858601	T	A	0.00891	RAD21	-	FALSE
chr1	193054154	G	A	0.00757	TROVE2	+	FALSE
chr16	88784415	T	C	0.00750	PIEZO1	-	TRUE	AluSx3	SINE,Alu
chr1	203766875	T	C	3.09664E-07	ZC3H11A,ZBED6	+	FALSE
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	10520764	T	C	0.00542	DFFA	-	TRUE	AluSc8	SINE,Alu
chr6	52868087	T	C	0.00594	ICK	-	TRUE	MER135	SINE,Alu
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	41917720	T	G	0.00727	C5orf51	+	FALSE
chr2	37330146	C	G	2.68632E-05		.	FALSE
chr1	246714587	G	A	0.00023	TFB2M	-	FALSE
chr1	168220489	A	G	0.00319		.	FALSE	AluSz6	SINE,Alu
chr1	79109337	G	T	0.00790	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	32096265	A	G	0.00208	PEF1	-	FALSE
chr17	65334867	T	C	1.03096E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr10	13234356	A	T	3.19668E-07	MCM10	+	FALSE
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	168218574	A	G	0.00148		.	FALSE	AluSz	SINE,Alu
chr1	1251844	T	C	0.00731	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	38174665	G	A	0.00339	CDCA8	+	FALSE
chr7	128143512	A	G	0.00984		.	FALSE	AluJr4	SINE,Alu
chr1	110136458	A	G	0.00136	GNAI3	+	FALSE
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr1	143467373	T	C	0.00182		.	FALSE
chr1	169101270	T	G	0.00036	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr2	202028727	A	G	0.00833	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	46077218	A	G	0.00783	NASP	+	TRUE	AluSc8	SINE,Alu
chr1	40219280	T	C	0.00169	PPIE	+	FALSE
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr9	133997543	C	G	0.00046	AIF1L	+	FALSE
chr19	23542193	T	C	0.00099	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	70610735	T	C	0.00259	LRRC40	-	FALSE
chr7	143003517	T	A	0.00251	CASP2	+	FALSE	AluY	SINE,Alu
chr2	128601490	T	C	0.00013		.	FALSE	AluJr	SINE,Alu
chr1	6582558	T	C	0.00479	NOL9	-	TRUE	AluSx1	SINE,Alu
chr3	14986104	T	C	0.00621	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr1	116234313	A	G	0.00262	VANGL1	+	FALSE
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr2	91805938	A	G	0.00000		.	FALSE	MLT1H1	SINE,Alu
chr1	28825830	A	G	0.00549	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr1	16892918	T	C	0.00128	NBPF1	-	FALSE
chr1	67874696	T	C	0.00014	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	15993699	C	A	0.00420		.	FALSE	AluSx4	SINE,Alu
chr1	93811476	G	C	0.00663		.	FALSE
chr1	9162206	T	C	0.00882		.	FALSE	AluSx	SINE,Alu
chr1	178444613	T	G	0.00630	RASAL2	+	FALSE
chr5	125962528	A	G	0.00924	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	16890644	C	T	0.00174	NBPF1	-	FALSE
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr1	52306079	T	A	0.00708	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr10	126677249	A	T	0.00762	CTBP2	-	FALSE
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr2	55516891	G	A	2.12747E-05	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	47840953	A	G	0.00404	CMPK1	+	FALSE
chr1	26755643	A	G	0.00728	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	40214148	A	G	0.00426	PPIE	+	TRUE	AluSq2	SINE,Alu
chr4	56236845	A	G	6.76031E-06	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	91990450	A	T	0.00091	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	65900357	G	T	0.00041	LEPR,LEPROT	+	FALSE
chr7	129592510	G	T	0.00165	UBE2H	-	FALSE
chr1	119574537	G	A	0.00255	WARS2	-	FALSE
chr2	201774774	T	C	0.00017		.	FALSE	AluJr4	SINE,Alu
chr3	10192816	A	G	0.00010	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	67874697	T	C	4.44446E-05	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	28662199	A	G	7.40709E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr4	119526740	C	G	0.00435	LOC729218	+	FALSE
chr1	15989141	C	G	0.00364		.	FALSE
chr1	144930596	C	A	0.00103	NBPF20,PDE4DIP	+,-	FALSE
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr3	14526656	A	G	0.00189	SLC6A6	+	FALSE
chr1	6283551	T	C	0.00324	ICMT	-	FALSE
chr3	42591956	G	A	0.00030	SEC22C	-	FALSE
chr1	25169634	A	G	0.00843	CLIC4	+	FALSE
chr1	145688664	A	T	0.00298	NBPF20,NBPF10,RNF115	+	FALSE
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr1	151742798	T	C	0.00626	OAZ3	+	FALSE
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr1	168218494	A	G	0.00317		.	FALSE	AluSz	SINE,Alu
chr1	145693061	A	G	0.00158	NBPF20,NBPF10	+	TRUE	AluSz6	SINE,Alu
chr20	25428294	A	G	1.11452E-05	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	117945042	G	A	0.00150	MAN1A2	+	FALSE
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr1	111489903	A	C	0.00666	LRIF1	-	FALSE
chr1	32373838	T	G	0.00376	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	41088377	C	T	2.57179E-08	RIMS3	-	FALSE
chr1	46165408	T	C	0.00106	IPP	-	TRUE	FRAM	SINE,Alu
chr1	11084103	T	A	0.00968	TARDBP	+	FALSE
chr12	57923211	A	C	0.00071	MBD6	+	FALSE	(C)n	SINE,Alu
chr4	42022464	C	A	0.00438	SLC30A9	+	FALSE
chr1	1534826	C	T	0.00382	FNDC10	-	FALSE
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr10	28971536	A	T	0.00815	BAMBI	+	FALSE
chr9	19373160	A	G	0.00404	DENND4C	+	FALSE	MADE1	SINE,Alu
chr1	32384710	G	A	0.00299	PTP4A2	-	FALSE
chr1	155106227	A	T	0.00214	EFNA1	+	FALSE
chr16	29454295	T	C	0.00019	SMG1P6,BOLA2-SMG1P6	-	TRUE	Tigger4a	SINE,Alu
chr1	11846092	G	T	0.00877	C1orf167,MTHFR	+,-	FALSE
chr1	27205224	T	C	0.00353		.	FALSE	AluSc	SINE,Alu
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr1	16889217	G	C	0.00795	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr15	49454018	C	T	0.00053	GALK2	+	FALSE	AluSx1	SINE,Alu
chr3	41281407	G	T	0.00288	CTNNB1	+	FALSE
chr1	990806	G	A	0.00432	AGRN	+	FALSE
chr1	19542433	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr19	19791270	A	G	0.00732	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	144619903	T	A	0.00712	NBPF20,NBPF9	+	FALSE
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr1	36068325	T	C	3.42972E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	28261657	C	T	0.00327	SMPDL3B	+	FALSE
chr4	4291832	A	T	6.49020E-08	LYAR	-	FALSE
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr18	28571649	A	T	0.00301	DSC3	-	FALSE	MER65C	SINE,Alu
chr4	17803604	T	C	0.00414	DCAF16	-	TRUE	AluY	SINE,Alu
chr8	95805070	A	G	0.00721	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr8	56985607	C	T	0.00085	RPS20	-	FALSE
chr1	6354955	G	A	0.00282	ACOT7	-	FALSE
chr11	65404869	G	T	1.77375E-05	PCNX3	+	FALSE
chr1	179327011	A	G	0.00930	SOAT1	+	TRUE
chr5	157185319	A	G	0.00100	LSM11	+	TRUE	AluSq	SINE,Alu
chr1	15989141	C	G	0.00091		.	FALSE
chr1	10240859	G	T	0.00312	UBE4B	+	FALSE
chr1	16945570	A	G	0.00131	CROCCP2	-	FALSE
chr1	16890286	C	T	3.65680E-06	NBPF1	-	FALSE
chr1	38326704	T	C	0.00328	INPP5B	-	TRUE	AluJr	SINE,Alu
chr5	125961463	A	G	0.00323	PHAX	+	TRUE	AluSz6	SINE,Alu
chr6	43747963	G	C	0.00274	VEGFA	+	FALSE
chr4	88059664	T	G	0.00178	AFF1	+	FALSE	(GT)n	SINE,Alu
chr8	38829839	A	G	0.00184	PLEKHA2	+	TRUE	AluJr4	SINE,Alu
chr21	18940466	A	T	0.00169	CXADR	+	FALSE	AluY	SINE,Alu
chr3	10192747	A	G	0.00893	VHL	+	TRUE	AluSx1	SINE,Alu
chr6	71299074	A	G	0.00824		.	FALSE	AluSx1	SINE,Alu
chr14	63841404	T	A	0.00470	PPP2R5E	-	FALSE	(T)n	SINE,Alu
chr1	179326882	A	G	0.00020	SOAT1	+	TRUE	AluJo	SINE,Alu
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr1	10520683	T	C	0.00058	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	150937771	T	A	0.00026	CERS2	-	FALSE	(ATTTTTT)n	SINE,Alu
chr1	109192040	T	C	6.39517E-05	HENMT1	-	TRUE	AluJr	SINE,Alu
chr1	16932429	C	G	0.00221	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr6	160101733	T	C	0.00784	SOD2	-	TRUE	AluSz	SINE,Alu
chr5	68850922	G	C	0.00323	OCLN	+	FALSE	AluSx4	SINE,Alu
chr3	52800284	T	C	6.08396E-05	NEK4	-	FALSE
chr3	9935263	A	G	1.04104E-09	JAGN1	+	FALSE
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr11	65404868	T	G	0.00022	PCNX3	+	FALSE
chr7	20178434	T	C	0.00178	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr2	37331546	T	C	0.00694		.	FALSE	AluJb	SINE,Alu
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr2	85547772	G	C	0.00871	TGOLN2	-	FALSE
chr8	144940794	G	C	0.00038	EPPK1	-	FALSE
chr1	171561203	T	G	0.00119	PRRC2C	+	FALSE
chr2	33812352	A	G	0.00223	FAM98A	-	FALSE
chr2	132275396	T	C	0.00348	LOC150776	+	FALSE
chr1	16890639	C	T	5.60894E-05	NBPF1	-	FALSE
chr1	46828700	A	G	0.00093	NSUN4	+	FALSE
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr1	21100753	T	C	0.00624	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr2	38971640	A	C	0.00050	SRSF7	-	FALSE
chr5	118175182	T	C	0.00205	DTWD2	-	TRUE	AluJr	SINE,Alu
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr4	165998654	T	C	0.00564	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr3	48632596	A	G	0.00666		.	FALSE
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr1	59142713	T	C	0.00078	MYSM1	-	FALSE
chr17	53470462	C	T	0.00230	MMD	-	FALSE
chr10	75009591	T	C	8.39163E-08	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr15	22969232	G	A	0.00017	CYFIP1	+	FALSE
chr1	28865502	G	A	0.00073	RCC1	+	FALSE
chr1	40539202	G	A	0.00966	PPT1	-	FALSE
chr2	71298486	T	C	0.00408	NAGK	+	FALSE
chr1	110207639	T	A	0.00080	GSTM4	+	FALSE
chr1	145499276	C	T	0.00581	NBPF20,NBPF10,LIX1L	+	FALSE
chr2	37328016	T	C	0.00473		.	FALSE
chr2	9629290	T	G	0.00180	ADAM17	-	FALSE	(TGT)n	SINE,Alu
chr6	42061234	T	C	0.00170		.	FALSE	AluSx1	SINE,Alu
chr1	16933583	T	C	0.00050	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr4	165998642	T	C	0.00021	TMEM192	-	TRUE	AluSg	SINE,Alu
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr1	149818441	T	C	0.00773		.	FALSE	MLT1D	SINE,Alu
chr1	120165038	A	G	0.00926	ZNF697	-	FALSE
chr1	179042512	A	G	4.06106E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr12	10311392	T	C	0.00177	OLR1	-	FALSE
chr4	39550612	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr1	9163290	T	C	0.00130		.	FALSE	AluSp	SINE,Alu
chr1	1647871	T	C	7.46571E-06	CDK11B,CDK11A	-	FALSE
chr7	116147752	A	G	0.00031	CAV2	+	FALSE	(AAAAGAAA)n	SINE,Alu
chr1	6651456	A	G	0.00614	KLHL21	-	FALSE
chr19	4423353	G	A	0.00057	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr1	108113839	T	C	0.00062	VAV3	-	FALSE
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr7	100271438	G	T	0.00460	GNB2	+	FALSE
chr1	38327700	T	C	0.00509	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr6	109786003	T	C	0.00245	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr5	52388459	A	T	0.00052	ITGA2	+	FALSE
chr1	110949720	C	T	0.00666	LAMTOR5	-	FALSE	L1ME4b	SINE,Alu
chr1	46075188	C	A	0.00199	NASP	+	FALSE	A-rich	SINE,Alu
chr2	85824711	G	A	0.00198	RNF181	+	FALSE
chr2	99813020	A	G	0.00015	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	233446266	C	T	0.00177	EIF4E2	+	FALSE
chr1	11721832	C	G	0.00514	FBXO44	+	FALSE
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr3	12624763	T	C	1.62214E-06	MKRN2	+	FALSE
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr2	238005476	C	T	0.00456	COPS8	+	FALSE
chr1	89225976	T	C	0.00586	PKN2	+	FALSE
chr1	8938276	T	A	0.00178	ENO1	-	FALSE
chr1	114940211	G	T	8.00129E-05	TRIM33	-	FALSE	(T)n	SINE,Alu
chr4	119553307	T	C	0.00096	LOC729218	+	FALSE
chr5	149823799	A	T	0.00672	RPS14	-	FALSE
chr8	11701429	T	C	0.00758	CTSB	-	TRUE	AluSx1	SINE,Alu

RBP	U2AF1
Knock-Method	shRNA
RBP Family	zf-CCCH
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR372UWV
Platform	HiSeq
Pubmed ID	32252787

U2AF1 - Target Gene Network