RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	115299508	A	T	0.00070	CSDE1	-	FALSE
chr1	100489992	A	G	0.00297	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr19	4423353	G	A	0.00057	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr1	36386884	C	T	0.00024	AGO1	+	FALSE
chr11	18552273	C	T	0.00243		.	FALSE
chr1	110136458	A	G	0.00136	GNAI3	+	FALSE
chr3	196079280	T	C	0.00614		.	FALSE	AluSx	SINE,Alu
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr10	79552092	C	T	0.00159	DLG5	-	FALSE
chr1	3731655	G	T	0.00985	CEP104	-	FALSE
chr16	10625266	T	C	0.00587	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	19543465	T	C	0.00427	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	74332839	A	G	4.77205E-06	TET3	+	FALSE
chr1	54691910	A	G	0.00481	SSBP3	-	FALSE
chr1	20976589	C	T	0.00407	PINK1,PINK1-AS	+,-	FALSE
chr1	1255400	T	C	0.00224	CPSF3L	-	FALSE
chr1	179852074	T	C	0.00033	TOR1AIP1	+	FALSE
chr2	204301754	C	G	0.00012	RAPH1	-	FALSE
chr1	990806	G	A	0.00432	AGRN	+	FALSE
chr1	28825418	A	G	0.00961	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	10519048	T	C	0.00089		.	FALSE	AluSx3	SINE,Alu
chr19	57816349	A	G	8.96695E-06		.	FALSE	AluY	SINE,Alu
chr1	91990450	A	T	0.00405	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr19	11257634	T	C	0.00237	SPC24	-	TRUE	AluSp	SINE,Alu
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr1	108113839	T	C	1.78857E-05	VAV3	-	FALSE
chr4	70707440	T	C	0.00059	SULT1E1	-	FALSE	AluJr	SINE,Alu
chr5	96110979	A	T	0.00020	ERAP1	-	FALSE
chr1	161928771	G	A	0.00294	ATF6	+	FALSE
chr4	68587786	G	T	0.00658	UBA6-AS1	+	FALSE	MER41B	SINE,Alu
chr1	144873887	C	T	0.00088	NBPF20,PDE4DIP	+,-	FALSE
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr9	131570178	T	C	0.00767	TBC1D13	+	FALSE
chr5	32586597	G	C	0.00970	SUB1	+	FALSE
chr2	216908679	C	T	0.00988	PECR	-	FALSE
chr1	3730400	T	C	0.00584	CEP104	-	TRUE	AluSx3	SINE,Alu
chr7	2473747	A	G	0.00872	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr2	181737842	C	T	0.00350	SCHLAP1	+	FALSE
chr6	47592459	A	G	0.00789	CD2AP	+	FALSE
chr1	179044181	A	G	1.64117E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr12	51325237	A	G	5.73531E-05	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr20	25428348	A	G	0.00121	GINS1	+	TRUE	AluSz	SINE,Alu
chr3	98518158	A	T	1.44910E-06	DCBLD2	-	FALSE
chr9	21331486	T	G	0.00675	KLHL9	-	FALSE
chr2	103332887	T	A	0.00515	MFSD9	-	FALSE	L2d2	SINE,Alu
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	202030311	T	A	0.00732	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	145500919	C	T	0.00029	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	1595034	T	C	2.36116E-07	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	19953130	T	A	0.00595	MINOS1,MINOS1-NBL1	+	FALSE
chr8	144827206	A	T	0.00196	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr1	87811103	T	G	0.00028	LMO4	+	FALSE
chr2	3607238	C	T	0.00222	RNASEH1-AS1	+	FALSE
chr4	10443061	G	T	0.00057	ZNF518B	-	FALSE
chr1	144877176	C	T	0.00010	NBPF20,PDE4DIP	+,-	FALSE
chr5	121362874	A	G	0.00607	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr1	212114662	A	G	0.00858	INTS7	-	FALSE
chr16	81064533	A	G	0.00686	CENPN	+	TRUE	AluSg	SINE,Alu
chr2	29135468	C	G	0.00217	WDR43	+	FALSE
chr3	62189465	C	T	2.69664E-05	PTPRG	+	FALSE
chr1	31342611	A	C	0.00145	SDC3	-	FALSE
chr1	109476780	C	T	0.00990	GPSM2,CLCC1	+,-	FALSE
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr1	36068370	T	C	0.00789	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	160625969	T	C	0.00527	LY75-CD302,CD302	-	TRUE	AluSz	SINE,Alu
chr1	46075612	A	G	0.00153	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr1	9642827	G	A	0.00985	SLC25A33	+	FALSE
chr1	19586519	A	G	0.00310	MRTO4	+	TRUE	AluSz	SINE,Alu
chr6	42856100	A	G	0.00048	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr18	24127008	T	G	0.00800	KCTD1	-	FALSE	(TGG)n	SINE,Alu
chr1	40306898	T	C	9.21891E-07	TRIT1	-	FALSE
chr1	89447715	T	G	0.00137	KYAT3,RBMXL1	-	FALSE
chr1	203766875	T	C	3.09664E-07	ZC3H11A,ZBED6	+	FALSE
chr12	125511961	A	G	1.08093E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	145282799	G	A	0.00081	NBPF20,NOTCH2NL	+	FALSE
chr1	27992800	C	A	5.71645E-05	IFI6	-	FALSE	FAM	SINE,Alu
chr1	11089869	A	G	0.00839	MASP2	-	FALSE	AluSp	SINE,Alu
chrX	119572534	C	A	0.00387	LAMP2	-	FALSE
chr1	45975345	A	G	0.00129	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	79356178	C	A	0.00678	ADGRL4	-	FALSE
chr2	61276758	A	G	0.00924	PEX13	+	TRUE	AluSp	SINE,Alu
chr5	37290496	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr1	56961756	A	G	0.00265	PLPP3	-	FALSE
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr1	120163518	C	T	0.00646	ZNF697	-	FALSE
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr2	27170943	A	C	0.00684	DPYSL5	+	FALSE	(CA)n	SINE,Alu
chr12	80168993	G	T	0.00513	PPP1R12A	-	FALSE
chr5	76372541	G	C	0.00498	ZBED3	-	FALSE
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr10	121437033	T	G	0.00357	BAG3	+	FALSE
chr20	309186	A	G	0.00665	SOX12	+	FALSE	A-rich	SINE,Alu
chr4	1380585	A	G	0.00644	UVSSA	+	TRUE	AluJr	SINE,Alu
chr1	33148118	A	G	0.00374	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	150345451	A	G	2.37481E-05	SELT	+	TRUE
chr1	1417974	C	T	0.00677	ATAD3B	+	FALSE
chr3	197611125	A	G	0.00948		.	FALSE	AluSx1	SINE,Alu
chr1	58999651	T	G	0.00484	OMA1	-	FALSE
chr1	179327011	A	G	0.00930	SOAT1	+	TRUE
chr1	28930023	G	A	0.00037	TAF12	-	FALSE
chr1	67874859	T	C	1.49998E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr15	90820171	A	G	0.00185		.	FALSE
chr1	179829595	T	C	0.00115	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr3	195412715	T	C	0.00837	SDHAP2	+	FALSE
chr4	248713	A	G	0.00367	ZNF876P	+	FALSE
chr1	204525666	A	G	0.00093	MDM4	+	TRUE	AluSz	SINE,Alu
chr3	48787219	A	G	0.00024	PRKAR2A	-	FALSE
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr1	161160459	T	C	0.00270	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr1	145376020	G	A	0.00478	NBPF20,NBPF10	+	FALSE
chr3	15114759	G	A	0.00595	RBSN	-	FALSE
chr1	184761312	T	C	0.00443	FAM129A	-	TRUE	AluJo	SINE,Alu
chr17	57279167	A	G	6.96573E-05	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	10042955	A	G	0.00430	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	216903620	T	C	0.00623	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	207943385	A	G	0.00558	CD46	+	TRUE	AluSx1	SINE,Alu
chr16	15794023	A	G	4.91052E-06	NDE1	+	TRUE	AluSz6	SINE,Alu
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr6	34252328	T	A	0.00062		.	FALSE	(T)n	SINE,Alu
chr4	22404391	G	A	0.00338	ADGRA3	-	FALSE
chr14	50320630	G	C	0.00316		.	FALSE	7SLRNA	SINE,Alu
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr1	10517672	T	C	0.00070		.	FALSE	AluSx1	SINE,Alu
chr1	12677549	T	A	1.84464E-05	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	10521162	T	C	0.00911	DFFA	-	TRUE	AluY	SINE,Alu
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr1	9161245	T	C	0.00480		.	FALSE	AluSx	SINE,Alu
chr3	119388380	T	C	0.00110	COX17	-	FALSE
chr1	148003749	T	C	0.00114	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	2326812	A	G	0.00709	RER1	+	FALSE
chr2	30480670	G	T	0.00167	LBH	+	FALSE
chr1	33148635	A	G	0.00168	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	155457052	T	A	0.00833	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	10519936	T	C	0.00029		.	FALSE	AluJr	SINE,Alu
chr4	152025793	T	A	0.00675	RPS3A	+	FALSE
chr12	133298339	A	G	1.45756E-07	PGAM5	+	TRUE	AluSp	SINE,Alu
chr3	45721836	A	G	0.00714	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr2	69689663	T	C	0.00091	AAK1	-	TRUE	AluSg	SINE,Alu
chr5	178508569	C	T	0.00571	ZNF354C	+	FALSE
chr17	65334758	T	C	1.31160E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	234542410	C	A	0.00832	TARBP1	-	FALSE
chr1	179044100	A	G	0.00219	FAM20B	+	TRUE	AluSx	SINE,Alu
chr5	290324	T	A	0.00729	PDCD6	+	FALSE
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr8	11701429	T	C	0.00758	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	46782446	A	G	0.00145	UQCRH	+	FALSE
chr1	146649854	C	T	0.00033	PDIA3P1	+	FALSE
chr1	28573293	G	A	0.00059		.	FALSE
chr1	26143697	G	C	0.00778	SEPN1	+	FALSE
chr1	85742155	G	A	0.00813	BCL10,LOC646626	+,-	FALSE
chr1	145689843	A	G	4.95254E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	6283558	A	T	0.00624	ICMT	-	FALSE
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	1668168	G	T	0.00344	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr2	232319578	C	A	0.00844	NCL	-	FALSE	A-rich	SINE,Alu
chr3	20195395	C	T	3.65176E-06	KAT2B	+	FALSE
chr4	39550084	T	C	2.47241E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr1	144833405	C	A	0.00345	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr1	36032276	A	T	0.00012	NCDN	+	FALSE	(CA)n	SINE,Alu
chr1	1152601	A	G	0.00075	SDF4	-	FALSE
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	17998	C	T	0.00995	WASH7P	-	FALSE
chr2	206986380	T	C	0.00053		.	FALSE	AluSz	SINE,Alu
chr1	121133770	A	G	0.00295	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr1	144595943	A	G	0.00050	NBPF20	+	FALSE	AluJb	SINE,Alu
chr4	38016395	T	G	0.00537	TBC1D1	+	FALSE
chr8	23290112	T	C	0.00121	ENTPD4	-	TRUE	AluY	SINE,Alu
chr12	9395329	G	A	0.00814	LINC00987	+	FALSE
chr16	56510329	T	G	0.00247	OGFOD1	+	FALSE
chr1	9645101	C	T	0.00726		.	FALSE	(ATATTC)n	SINE,Alu
chr2	191366707	A	G	0.00900	MFSD6	+	FALSE
chr12	56510709	G	A	0.00047	RPL41	+	FALSE
chr1	10521172	T	C	0.00178	DFFA	-	TRUE	AluY	SINE,Alu
chr4	103731698	T	C	0.00029	UBE2D3	-	TRUE	AluYk2	SINE,Alu
chr1	65299548	T	A	0.00852	JAK1	-	FALSE
chr1	148595665	A	G	0.00141	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr5	41917720	T	G	0.00727	C5orf51	+	FALSE
chr1	9160900	T	C	0.00893		.	FALSE	AluJb	SINE,Alu
chr1	45975574	A	G	0.00613	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr4	7764017	T	C	0.00028	AFAP1,AFAP1-AS1	+,-	FALSE
chr5	52250837	C	T	0.00017		.	FALSE
chr5	115165731	T	C	5.24208E-07	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	19586458	A	G	0.00053	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	95660026	G	T	0.00129	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr2	130900880	C	T	0.00044	CCDC74B	-	FALSE
chr20	3848225	A	G	0.00075	MAVS	+	TRUE	AluJr	SINE,Alu
chr1	9990314	T	A	0.00017	LZIC	-	FALSE
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	179042512	A	G	4.06106E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	206862015	G	A	0.00368	INO80D	-	FALSE
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	228107281	G	A	0.00833		.	FALSE
chr1	19543457	T	C	0.00569	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr11	60658566	A	C	0.00387	PRPF19	-	FALSE

RBP	MAZ
Knock-Method	siRNA
RBP Family	zf-C2H2
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR129WCZ
Platform	HiSeq
Pubmed ID	32252787

MAZ - Target Gene Network