RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	33148096	A	G	0.00404	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	46075188	C	A	0.00199	NASP	+	FALSE	A-rich	SINE,Alu
chr1	87213190	A	C	0.00054	SH3GLB1	+	FALSE
chr1	19586360	T	C	0.00023	MRTO4	+	FALSE
chr12	123346999	T	A	0.00838	HIP1R	+	FALSE
chr1	218617066	A	T	0.00036	TGFB2-OT1,TGFB2	+	FALSE
chr20	3905907	A	G	0.00325	PANK2	+	TRUE	AluSx	SINE,Alu
chr3	15114759	G	A	1.99109E-05	RBSN	-	FALSE
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr3	178954055	T	C	0.00308	PIK3CA	+	FALSE
chr5	53841238	G	T	0.00267	SNX18	+	FALSE
chr5	92956173	C	T	0.00646	FAM172A	-	FALSE
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr1	116234313	A	G	0.00016	VANGL1	+	FALSE
chr1	144902696	A	T	0.00997	NBPF20,PDE4DIP	+,-	FALSE
chr5	56177845	A	T	0.00420	MAP3K1	+	FALSE
chr12	133298254	A	G	1.64181E-10	PGAM5	+	TRUE	AluSp	SINE,Alu
chr3	183890097	G	A	1.43668E-06	DVL3	+	FALSE
chr1	33149496	A	G	0.00662	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	49506286	G	T	0.00052	DAG1	+	FALSE	AluJb	SINE,Alu
chr1	156044222	G	T	0.00758	MEX3A	-	FALSE	(T)n	SINE,Alu
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr7	128097846	A	G	0.00015	HILPDA	+	TRUE	AluSx1	SINE,Alu
chr1	100548868	T	C	0.00114	MFSD14A	+	FALSE
chr2	10179657	A	C	0.00035		.	FALSE	L1ME4b	SINE,Alu
chrX	23721422	A	C	0.00160		.	FALSE
chr1	10517659	T	C	0.00679		.	FALSE	AluSx1	SINE,Alu
chr2	216300795	C	G	0.00641		.	FALSE
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr7	129472333	C	T	0.00292	UBE2H	-	FALSE	(CA)n	SINE,Alu
chr12	72096206	A	G	2.06003E-07	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	23240263	G	A	5.22984E-05	EPHB2	+	FALSE
chr4	113152490	G	A	0.00221		.	FALSE
chr2	114352238	G	A	1.72390E-05	WASH2P	+	FALSE
chr1	113511408	A	G	0.00738		.	FALSE	AluY	SINE,Alu
chr3	10322521	T	C	0.00531	TATDN2	+	FALSE
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr1	205686523	G	T	2.43057E-05	NUCKS1	-	FALSE
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr2	36776056	T	A	0.00030	CRIM1	+	FALSE
chr4	39552066	T	C	0.00370	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chrX	152916230	A	C	1.62471E-05	DUSP9	+	FALSE
chr4	140394600	G	A	0.00950	RAB33B	+	FALSE
chr1	19542631	T	C	0.00198	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr1	101444796	C	T	0.00453	SLC30A7	+	FALSE
chr1	145509570	A	G	0.00037	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	158057633	C	G	0.00031	KIRREL	+	FALSE
chr5	139931631	G	C	0.00138	SRA1	-	FALSE
chr6	114181220	A	G	0.00265	MARCKS	+	FALSE
chr1	54692341	T	C	0.00027	SSBP3	-	FALSE	(T)n	SINE,Alu
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr3	182614493	T	C	0.00195	ATP11B	+	FALSE
chr3	44791351	T	C	0.00497	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	10517352	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr1	120612006	G	A	0.00602	NOTCH2	-	FALSE
chr3	195243003	A	C	0.00301	PPP1R2	-	FALSE
chr4	17803616	T	C	0.00046	DCAF16	-	TRUE	AluY	SINE,Alu
chr3	101284940	T	C	1.85568E-05	TRMT10C	+	FALSE
chr1	1650845	G	A	0.00094	CDK11B,CDK11A	-	FALSE
chr1	10518797	T	C	0.00421		.	FALSE	AluSx1	SINE,Alu
chr1	16929327	C	T	0.00304	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	16912014	A	C	0.00704	NBPF1	-	FALSE
chr3	196728813	C	T	0.00068	MELTF	-	FALSE
chr10	61548856	T	C	0.00067	CCDC6	-	FALSE
chr7	100031511	C	T	0.00490	MEPCE	+	FALSE
chr1	114449662	T	C	0.00223	DCLRE1B	+	FALSE
chr1	27250642	A	G	0.00020	NUDC	+	FALSE
chr7	130629624	T	C	0.00435	LINC-PINT	-	TRUE
chr7	107789927	T	C	0.00111	NRCAM	-	FALSE
chr2	232319593	A	C	0.00348	NCL	-	FALSE	A-rich	SINE,Alu
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr2	37327280	A	T	0.00831		.	FALSE	L1MB8	SINE,Alu
chr3	160969268	C	T	0.00835	NMD3	+	FALSE
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr1	19586455	A	G	3.44081E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	156763332	A	G	0.00090	NOM1	+	TRUE	AluSx	SINE,Alu
chr1	1594940	T	C	0.00115	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr4	247533	A	G	0.00972	ZNF876P	+	FALSE
chr4	248783	A	G	0.00901	ZNF876P	+	FALSE	L1MA3	SINE,Alu
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr19	21907988	C	T	0.00295	ZNF100	-	FALSE
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr2	37429532	A	G	0.00014	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr17	78226862	A	C	0.00590	SLC26A11	+	FALSE
chr1	212515613	C	T	0.00286	PPP2R5A	+	FALSE
chrX	77083673	T	C	0.00090	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr5	172396725	T	A	0.00014	RPL26L1	+	FALSE
chr1	201438097	G	C	2.75480E-05	PHLDA3	-	FALSE
chr1	68940887	T	G	0.00293	DEPDC1	-	FALSE	MIR	SINE,Alu
chr1	156499969	T	C	8.53229E-06	IQGAP3	-	FALSE
chr1	32508534	A	G	0.00666	KHDRBS1	+	FALSE
chr2	73460314	C	T	0.00333	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	1597020	C	G	0.00021	CDK11B,SLC35E2B	-	FALSE
chr1	67874859	T	C	1.49998E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr19	11256703	T	C	2.95254E-05	SPC24	-	TRUE	AluJr4	SINE,Alu
chr3	196079700	T	C	0.00518		.	FALSE	AluSc	SINE,Alu
chr1	26755643	A	G	0.00428	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	201860626	A	G	0.00599	SHISA4	+	FALSE
chr1	1594196	T	C	0.00097	CDK11B,SLC35E2B	-	FALSE
chr2	50147865	T	A	0.00112	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	109475543	A	G	0.00325	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr10	45499895	G	A	0.00255	ZNF22	+	FALSE
chr1	16890484	G	C	0.00704	NBPF1	-	FALSE
chr2	176792535	T	G	0.00211	LNPK	-	FALSE
chrX	2824916	T	C	6.31541E-06	ARSD	-	TRUE	AluSx1	SINE,Alu
chr3	58292300	C	T	0.00740	RPP14	+	FALSE
chr1	31346203	A	C	0.00050	SDC3	-	FALSE
chr1	47716042	A	T	0.00574	STIL	-	FALSE
chr2	32535873	A	G	0.00270		.	FALSE	AluJb	SINE,Alu
chr6	27327349	C	G	0.00359	ZNF204P	-	FALSE
chr20	25428646	A	G	9.98122E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr13	31033316	T	A	0.00497	HMGB1	-	FALSE
chr7	6063468	G	A	0.00451	EIF2AK1	-	FALSE
chr12	124146073	A	G	0.00085	GTF2H3	+	FALSE	AluSx4	SINE,Alu
chr2	31491629	A	G	2.09863E-05		.	FALSE
chr1	25570566	C	G	0.00326	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	36386884	C	T	0.00590	AGO1	+	FALSE
chr1	11347154	A	T	0.00366	UBIAD1	+	FALSE
chr4	7762848	G	A	4.98180E-08	AFAP1,AFAP1-AS1	+,-	FALSE
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr3	10290508	C	T	0.00682	TATDN2	+	FALSE
chr1	168220535	A	G	0.00665		.	FALSE	AluSz6	SINE,Alu
chr4	53732381	C	T	0.00433	RASL11B	+	FALSE	(TTTCTTT)n	SINE,Alu
chr1	179042555	A	G	0.00922	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	144816555	C	T	0.00530	NBPF20,NBPF9	+	FALSE
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chr5	40832555	A	T	5.95918E-06	RPL37	-	FALSE
chr1	33148696	A	G	0.00363	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr20	25427885	A	G	0.00455	GINS1	+	TRUE	AluSz	SINE,Alu
chr3	15115284	G	A	0.00305	RBSN	-	FALSE
chr1	150281017	A	G	0.00057	MRPS21	+	TRUE	AluSz	SINE,Alu
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr5	1574319	T	A	0.00158	SDHAP3	-	FALSE
chr1	180854773	A	G	0.00800	XPR1	+	FALSE
chr1	10519064	T	C	0.00192		.	FALSE	AluSx3	SINE,Alu
chr1	38327700	T	C	0.00509	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	26755643	A	G	0.00068	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	45975345	A	G	0.00129	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	83406544	C	T	0.00328	TMEM150C	-	FALSE
chr1	179042692	A	G	4.94937E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	59120961	G	A	9.55369E-05	MYSM1	-	FALSE
chr1	43629982	C	T	0.00118	EBNA1BP2	-	FALSE
chr2	206986245	T	C	0.00304		.	FALSE	AluSz	SINE,Alu
chr6	13790848	T	C	0.00344	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr12	52631385	G	C	0.00777	KRT7	+	FALSE
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr1	40219280	T	C	8.82951E-05	PPIE	+	FALSE
chr6	31324705	A	C	0.00179		.	FALSE
chr1	1593023	G	C	2.84325E-05	CDK11B,SLC35E2B	-	FALSE
chr1	146628742	T	G	0.00102	PRKAB2	-	FALSE
chr1	15990912	T	C	0.00133		.	FALSE	AluSx3	SINE,Alu
chr3	13670776	T	C	0.00336	FBLN2	+	FALSE
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr2	238484068	T	C	0.00047	RAB17	-	FALSE
chr1	53288862	A	G	0.00503	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	165877575	A	C	0.00675	UCK2	+	FALSE
chr12	46577921	G	T	0.00306	SLC38A1	-	FALSE
chr1	44818549	C	T	0.00108	ERI3	-	FALSE
chr1	179829425	T	C	1.55944E-05	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	237065583	G	T	0.00959	MTR	+	FALSE
chr3	12942852	C	A	0.00458	IQSEC1	-	FALSE
chr7	152342445	T	C	0.00059		.	FALSE	AluJo	SINE,Alu
chr15	41597437	T	A	0.00217		.	FALSE	AluSz6	SINE,Alu
chr10	75008815	T	C	5.77576E-09	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	155230131	C	T	0.00829	SCAMP3	-	FALSE
chr1	1459332	G	A	1.33172E-08	ATAD3A	+	FALSE
chr10	101563815	G	A	0.00218	ABCC2	+	FALSE
chr1	31905905	G	C	0.00948	SERINC2	+	FALSE
chr1	36067851	T	C	0.00269	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10520684	T	C	0.00389	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	2336210	C	T	0.00509	RER1	+	FALSE
chr1	36642420	T	C	0.00188	MAP7D1	+	FALSE
chr1	245017464	T	A	0.00314	HNRNPU,SNORA100	-	FALSE
chr2	204055625	G	A	0.00426	NBEAL1	+	FALSE
chr8	144940792	G	C	9.20360E-05	EPPK1	-	FALSE
chr7	6063466	T	A	0.00153	EIF2AK1	-	FALSE
chr4	89625427	G	C	0.00025	HERC3	+	FALSE
chr1	10517352	T	C	0.00064		.	FALSE	AluJr	SINE,Alu
chr4	88061645	T	A	0.00049	AFF1	+	FALSE	(TATAT)n	SINE,Alu
chr14	92629726	T	A	0.00787	CPSF2	+	FALSE
chr8	144940222	A	C	0.00202	EPPK1	-	FALSE
chr16	9204015	C	T	0.00325	C16orf72	+	FALSE
chr5	65452100	G	T	0.00600	SREK1	+	FALSE	(TTTTTG)n	SINE,Alu
chr1	74672474	G	A	0.00441	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr3	148748339	G	T	0.00666	HLTF	-	FALSE
chr1	27202845	T	C	0.00034		.	FALSE	AluSq2	SINE,Alu
chr1	16892938	T	C	0.00569	NBPF1	-	FALSE
chr2	230629138	C	T	0.00958	TRIP12	-	FALSE
chr1	193055149	A	G	0.00589	TROVE2	+	FALSE
chr1	148252049	A	C	0.00493	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	67874696	T	C	0.00839	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	13936953	C	T	0.00515	PDPN	+	FALSE
chr1	138156	G	T	0.00413	LOC729737	-	FALSE
chr1	45987557	G	C	0.00921	PRDX1	-	FALSE
chr3	93780109	G	C	8.09346E-05	DHFR2	-	FALSE
chr5	36143392	C	T	0.00625	LMBRD2	-	FALSE
chr7	36447358	G	C	0.00838	ANLN	+	FALSE
chr7	20178420	T	C	0.00053	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	3545191	C	T	0.00165	TPRG1L	+	FALSE
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr14	90509564	C	T	0.00552	TDP1	+	FALSE
chr1	46077218	A	G	0.00543	NASP	+	TRUE	AluSc8	SINE,Alu
chr2	26612465	G	A	0.00270	EPT1	+	FALSE
chr1	87170493	T	G	0.00345	SH3GLB1	+	FALSE
chr1	154128838	G	T	0.00062	TPM3	-	FALSE
chr1	16575726	T	C	0.00916	FBXO42	-	FALSE
chr1	38326774	T	C	0.00664	INPP5B	-	TRUE	AluJr	SINE,Alu
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr4	56295161	T	A	0.00075	CLOCK	-	FALSE	(T)n	SINE,Alu
chr3	14986453	T	C	1.05842E-07	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr2	9629954	T	C	0.00802	ADAM17	-	FALSE
chr4	7761211	C	T	8.70555E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr2	71412707	G	A	0.00305	PAIP2B	-	FALSE	AluJr	SINE,Alu
chr1	53289860	A	G	0.00119	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	6585215	C	T	0.00286	NOL9	-	FALSE	FAM	SINE,Alu
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr8	41401571	T	A	0.00240	LOC102723729,GINS4	+,-	FALSE
chr1	220231484	T	C	0.00046	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	145283718	G	A	0.00989	NBPF20,NOTCH2NL	+	FALSE
chr1	19542458	T	C	0.00113	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145284138	G	A	0.00382	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr1	16723840	G	A	0.00072	SZRD1	+	FALSE
chr15	49419124	T	C	1.84263E-05	COPS2	-	TRUE	MARNA	SINE,Alu
chr1	46159823	T	A	0.00823	TMEM69	+	FALSE
chr12	15035081	T	C	0.00951	MGP	-	FALSE
chr3	156259317	T	C	0.00189	SSR3	-	TRUE	AluSq2	SINE,Alu
chr7	116437206	A	G	0.00118	MET	+	FALSE
chr1	36390527	A	G	0.00065		.	FALSE	L2c	SINE,Alu
chr1	19542456	T	C	0.00186	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	10302172	G	A	0.00202	TATDN2	+	FALSE
chr1	17394048	T	A	0.00055	PADI2	-	FALSE
chr1	75190452	C	T	4.33030E-05	CRYZ	-	FALSE
chr1	10042988	A	G	0.00095	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	3546128	A	G	0.00703	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr5	151041876	G	T	5.29152E-05	SPARC	-	FALSE
chr1	178887208	A	T	0.00239	RALGPS2	+	FALSE
chr1	45975628	A	G	0.00413	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr4	36121336	T	G	0.00183	ARAP2	-	FALSE
chr17	65334986	T	C	1.42836E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr4	185397529	A	G	0.00116		.	FALSE	FRAM	SINE,Alu
chr2	101622889	T	A	0.00022	RPL31	+	FALSE
chr3	156258308	T	C	0.00323	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	119574537	G	A	0.00783	WARS2	-	FALSE
chr4	123859284	C	T	0.00034	SPATA5	+	FALSE
chr1	36770045	T	C	0.00943	THRAP3	+	FALSE
chr1	179327008	A	G	0.00168	SOAT1	+	TRUE
chr4	177252238	A	G	3.85736E-09	SPCS3	+	TRUE
chr1	212459257	A	G	0.00068	PPP2R5A	+	FALSE
chr4	6718811	A	G	1.36854E-07	BLOC1S4	+	FALSE	FLAM_A	SINE,Alu
chr1	117532509	C	A	0.00521	PTGFRN	+	FALSE
chr16	8902411	A	G	0.00357	PMM2	+	FALSE
chr6	3154871	A	C	7.50591E-06	TUBB2A	-	FALSE
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr5	149364145	A	G	0.00383	SLC26A2	+	TRUE	AluSc8	SINE,Alu
chr1	28826223	A	G	0.00990	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	570178	G	A	0.00787		.	FALSE
chr1	26755136	A	G	0.00279	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	27182751	C	A	0.00122		.	FALSE
chr2	74442431	T	G	0.00375		.	FALSE
chr1	1498747	T	C	0.00847	SSU72	-	TRUE	AluSg7	SINE,Alu
chr1	10521172	T	C	0.00244	DFFA	-	TRUE	AluY	SINE,Alu
chr1	121133392	T	C	0.00651	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr6	26368938	C	T	0.00121	BTN3A2	+	FALSE
chr1	145512141	A	G	0.00215	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	86049391	T	A	0.00019	CYR61	+	FALSE
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr3	44790773	T	C	0.00122	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	11783041	A	G	0.00036		.	FALSE	AluSx	SINE,Alu
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr1	9328223	A	G	0.00591	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	145512073	A	G	0.00066	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr1	11141187	C	G	0.00819	EXOSC10	-	FALSE
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr2	201774244	T	C	0.00332		.	FALSE	AluSz	SINE,Alu
chr8	143763618	C	G	0.00421	PSCA	+	FALSE
chr1	92975262	C	A	0.00238	EVI5	-	FALSE
chr4	83406545	A	G	0.00156	TMEM150C	-	FALSE
chr1	10517953	T	A	0.00535		.	FALSE
chr1	33277080	C	T	8.00797E-06	YARS	-	FALSE	LTR6A	SINE,Alu
chr1	26608015	T	A	3.80922E-07		.	FALSE
chrX	24095066	G	T	0.00603	EIF2S3	+	FALSE
chr10	15120275	T	C	0.00017	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr1	148556726	G	T	0.00023		.	FALSE
chr10	102121601	A	G	0.00000	SCD	+	TRUE	MLT1L	SINE,Alu
chr1	36535590	A	G	0.00301		.	FALSE	AluSx1	SINE,Alu
chr9	89627066	A	G	0.00588	LOC440173	-	FALSE
chr2	206987229	T	C	0.00743		.	FALSE	AluSx	SINE,Alu
chr10	129216658	T	C	0.00710	DOCK1	+	FALSE
chr14	74431191	A	G	0.00670	ENTPD5	-	FALSE
chr6	44222158	T	A	0.00856	SLC35B2	-	FALSE
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr1	10518591	A	T	0.00811		.	FALSE
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr3	44790879	T	C	0.00453	KIAA1143	-	TRUE	AluY	SINE,Alu
chr3	197400501	C	G	0.00011	RUBCN	-	FALSE
chr3	52448770	A	G	0.00498	PHF7	+	TRUE	AluJb	SINE,Alu
chr1	109818159	G	T	0.00419	CELSR2	+	FALSE
chr1	169768080	C	A	0.00980	C1orf112	+	FALSE
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr2	55462102	A	G	0.00026	RPS27A	+	FALSE
chr5	34908535	T	C	0.00054	RAD1	-	FALSE	AluSp	SINE,Alu
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	211920314	T	C	0.00938	LPGAT1	-	FALSE
chr13	25473685	C	T	0.00580	CENPJ	-	FALSE
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr7	21941589	T	A	0.00535	CDCA7L	-	FALSE
chr3	28390351	A	G	0.00200	AZI2	-	FALSE
chr3	42689777	T	G	0.00696	NKTR,LOC101928323	+,-	FALSE	MLT1E3	SINE,Alu
chr3	191100561	C	A	2.52744E-07	CCDC50	+	FALSE
chr1	204521239	A	G	0.00095	MDM4	+	TRUE	AluSp	SINE,Alu
chr2	37479862	C	T	0.00603	PRKD3	-	FALSE
chr5	180001389	G	A	0.00138	CNOT6	+	FALSE
chr1	145281633	C	A	0.00059	NBPF20,NOTCH2NL	+	FALSE
chr1	10042987	A	G	3.47016E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	47840938	A	G	0.00089	CMPK1	+	FALSE
chr1	144053664	A	C	0.00050		.	FALSE
chr1	28662199	A	G	0.00138	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	176176230	G	A	0.00091	RFWD2	-	FALSE
chr3	98518158	A	T	1.44910E-06	DCBLD2	-	FALSE
chr2	70504926	A	G	0.00671	PCYOX1	+	FALSE	MER5A	SINE,Alu
chr1	10517567	T	C	0.00262		.	FALSE	AluSx1	SINE,Alu
chr2	32535797	A	G	0.00910		.	FALSE	AluJb	SINE,Alu
chr5	174956494	T	A	2.51545E-05	SFXN1	+	FALSE
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr4	2940243	T	A	0.00028	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr1	24293612	G	A	0.00366		.	FALSE
chr1	67874697	T	C	0.00642	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	10043363	A	G	0.00509	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr15	42503333	T	C	0.00120	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr22	33257373	G	A	0.00581	SYN3,TIMP3	+,-	FALSE
chr3	44791062	T	C	0.00014	KIAA1143	-	FALSE
chr1	16133912	T	C	0.00126	UQCRHL	-	TRUE
chr1	78414285	T	A	0.00256	FUBP1	-	FALSE
chr2	24522807	C	T	0.00079	ITSN2	-	FALSE
chr5	180236449	G	C	0.00011	MGAT1	-	FALSE
chr3	195243024	C	A	0.00729	PPP1R2	-	FALSE
chr6	42856029	A	G	0.00099	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr8	48890114	A	G	2.61683E-11	MCM4	+	TRUE	AluJb	SINE,Alu
chr6	13789470	T	C	0.00166	MCUR1	-	TRUE	AluSg	SINE,Alu
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr6	42857542	T	A	0.00029	RPL7L1	+	FALSE	MIRc	SINE,Alu
chr17	65334856	T	C	1.38810E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	101541172	A	G	6.48917E-05	LOC102606465	+	TRUE	MLT1K	SINE,Alu
chr6	160100926	T	C	0.00028	SOD2	-	TRUE	AluSz	SINE,Alu
chr1	148595665	A	G	0.00141	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	45244433	G	A	0.00060		.	FALSE
chr1	10519951	T	C	0.00378		.	FALSE	AluJr	SINE,Alu
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	145513114	A	G	0.00033	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	97534237	C	T	0.00644	SEMA4C	-	FALSE
chr1	10521200	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr4	39551031	T	C	0.00068	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	67874696	T	C	9.42249E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr15	41590943	A	G	0.00561	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	109465174	A	C	0.00234	GPSM2	+	FALSE
chr1	154554950	G	T	0.00599	ADAR	-	FALSE
chr1	17739586	G	A	0.00093	RCC2	-	FALSE
chr1	10519888	T	C	0.00666		.	FALSE	AluJr	SINE,Alu
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr1	46828700	A	G	0.00273	NSUN4	+	FALSE
chr1	45975574	A	G	0.00890	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr1	115313039	A	G	0.00895	SIKE1	-	FALSE
chr1	54636689	A	G	0.00268		.	FALSE
chr1	67895926	A	G	0.00705	SERBP1	-	FALSE
chr1	38326661	T	C	0.00023	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	207247475	C	A	0.00680	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr16	75479910	T	C	0.00026	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	1001422	G	T	0.00998		.	FALSE	LTR13A	SINE,Alu
chr20	18468404	T	C	0.00301	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	46076599	A	G	0.00116	NASP	+	TRUE	AluSx	SINE,Alu
chr5	130536847	A	G	0.00917	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr1	1252180	T	C	0.00021	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr1	89649522	T	C	0.00358	GBP4	-	TRUE	AluJb	SINE,Alu
chr2	85132775	C	G	7.25564E-06	TMSB10	+	FALSE
chr2	128644574	A	G	0.00163		.	FALSE
chr1	54691922	T	A	0.00067	SSBP3	-	FALSE
chr6	3225721	C	G	4.80019E-07	TUBB2B	-	FALSE
chr2	10194192	T	C	0.00715	KLF11	+	FALSE
chr1	28836048	G	A	0.00035	SNHG3,RCC1	+	FALSE	AluSx4	SINE,Alu
chr10	75009921	T	C	0.00639	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr15	74319733	A	G	0.00524	PML	+	TRUE	AluJr	SINE,Alu
chr19	58357268	A	G	0.00099	ZNF587B	+	TRUE	AluSx3	SINE,Alu
chr9	100777784	T	A	0.00080	ANP32B	+	FALSE
chr11	68523567	T	C	0.00079	CPT1A	-	TRUE	AluSq	SINE,Alu
chr2	37331037	T	C	0.00026		.	FALSE	AluSx1	SINE,Alu
chr2	37327666	T	C	0.00028		.	FALSE
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr1	120163247	T	C	0.00010	ZNF697	-	FALSE
chr1	32638906	C	T	5.73102E-10	KPNA6	+	FALSE
chr14	50792787	A	G	0.00278	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	27992798	C	A	0.00690	IFI6	-	FALSE	FAM	SINE,Alu
chr1	32697071	C	A	0.00134	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	67874689	T	C	0.00112	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	197070776	C	T	0.00698	ASPM	-	FALSE
chr1	8045343	C	A	0.00162		.	FALSE
chr3	33186111	T	C	0.00349	CRTAP	+	FALSE	LTR16A1	SINE,Alu
chr1	881627	G	A	2.43828E-05	NOC2L	-	FALSE
chr1	67875011	G	T	0.00359	SERBP1	-	FALSE
chr1	24086807	T	C	0.00352	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	53289759	A	G	0.00383	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr2	238253065	C	T	0.00914	COL6A3	-	FALSE
chr1	145511988	A	G	0.00965	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr7	44917316	T	C	0.00564	PURB	-	FALSE	AluSz	SINE,Alu
chr17	47007752	A	T	0.00029	SNF8	-	FALSE
chr2	232328545	C	T	0.00581	NCL	-	FALSE
chr11	74551853	A	C	0.00079	RNF169	+	FALSE
chr1	145512078	A	G	0.00615	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	14986133	T	C	1.90274E-11	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	7833544	T	C	0.00186	VAMP3	+	FALSE
chr8	40011786	C	A	0.00196	C8orf4	+	FALSE
chr5	93018884	A	C	0.00030	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr6	71299074	A	G	0.00824		.	FALSE	AluSx1	SINE,Alu
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr4	41956413	C	T	0.00543	TMEM33	+	FALSE
chr1	1252749	T	C	0.00875	CPSF3L	-	TRUE	AluSp	SINE,Alu
chrX	77083846	T	C	0.00668	MAGT1	-	TRUE	AluSz	SINE,Alu
chr5	40832557	G	T	0.00024	RPL37	-	FALSE
chr1	19585554	A	G	2.15626E-06	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	1534614	T	C	5.67045E-11	FNDC10	-	FALSE
chr4	25749196	T	A	0.00870	SEL1L3	-	FALSE
chr1	16932931	C	A	0.00169	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	135208352	T	G	0.00259	MGAT5	+	FALSE
chr2	114220055	T	C	9.23000E-05	CBWD2	+	FALSE
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr1	46662492	G	A	9.93078E-05	POMGNT1	-	FALSE
chr14	53243438	T	C	7.89901E-12	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr3	149679162	T	A	0.00235	RNF13	+	FALSE
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr2	86249930	T	C	6.06022E-05	LOC90784	-	TRUE	AluJr	SINE,Alu
chr14	76671382	A	G	0.00777	GPATCH2L	+	TRUE	AluJr4	SINE,Alu
chr2	37330576	T	C	0.00055		.	FALSE	AluSq2	SINE,Alu
chr8	23290112	T	C	0.00121	ENTPD4	-	TRUE	AluY	SINE,Alu
chr12	77438436	T	C	0.00187	E2F7	-	FALSE
chr1	144604425	C	T	0.00299	NBPF20	+	FALSE
chr1	26449327	A	G	0.00330	PDIK1L	+	FALSE
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr1	28904397	C	G	0.00125	TRNAU1AP	+	FALSE
chr1	11783009	A	G	7.55078E-05		.	FALSE	AluSx	SINE,Alu

RBP	HNRNPA0
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR720BPO
Platform	HiSeq
Pubmed ID	32252787

HNRNPA0 - Target Gene Network