RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr7	44917278	T	C	0.00461	PURB	-	TRUE	AluSz	SINE,Alu
chr7	100957851	T	C	0.00028	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr3	48787108	T	C	0.00291	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	16912029	C	G	0.00177	NBPF1	-	FALSE
chr7	128829066	A	G	0.00816	SMO	+	FALSE
chr3	152882287	C	T	0.00774	RAP2B	+	FALSE
chr1	155853251	A	G	0.00207	SYT11	+	TRUE	AluJb	SINE,Alu
chr7	6442891	G	A	0.00134	RAC1	+	FALSE
chr1	87328400	C	T	0.00755	SEP15	-	FALSE
chr13	50273970	C	T	1.77946E-05	KPNA3	-	FALSE
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr5	154194459	C	A	0.00556	LARP1	+	FALSE
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr16	22296860	A	G	0.00041	EEF2K	+	TRUE	AluJo	SINE,Alu
chr1	65299564	G	T	0.00664	JAK1	-	FALSE
chr1	6257826	T	C	0.00192	RPL22	-	FALSE
chr1	224517842	C	T	0.00014	NVL	-	FALSE
chr1	149581866	C	G	0.00774	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr4	95586727	G	T	0.00996	PDLIM5	+	FALSE
chr12	133298254	A	G	1.64181E-10	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	22400707	C	G	0.00232	CDC42	+	FALSE	AluSc8	SINE,Alu
chr16	10623558	T	C	0.00103	EMP2	-	TRUE	AluSp	SINE,Alu
chr4	843695	A	G	0.00602	GAK	-	FALSE
chr1	146650916	C	T	0.00025	PDIA3P1	+	FALSE
chr2	203744241	T	C	0.00511		.	FALSE	AluSx	SINE,Alu
chr3	42594019	C	T	3.51223E-05	SEC22C	-	FALSE
chr1	54493443	C	A	0.00872	TMEM59	-	FALSE	AluSz6	SINE,Alu
chr1	180247477	C	T	0.00060		.	FALSE
chr1	145293498	G	C	0.00154	NBPF20,NBPF10	+	FALSE
chr2	74381319	C	A	0.00912	MOB1A	-	FALSE	AluY	SINE,Alu
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr1	10517659	T	C	0.00010		.	FALSE	AluSx1	SINE,Alu
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr2	86249962	T	C	0.00443	LOC90784	-	TRUE	AluJr	SINE,Alu
chr3	158320703	C	A	0.00841	MLF1	+	FALSE
chr3	189675270	T	G	0.00039	P3H2	-	FALSE
chr17	58156064	G	A	9.79781E-05	HEATR6	-	FALSE
chr7	6064007	T	A	0.00551	EIF2AK1	-	FALSE
chr3	167727417	C	T	2.31470E-08	GOLIM4	-	FALSE
chr1	16890331	C	G	0.00226	NBPF1	-	FALSE
chr16	10625437	T	C	0.00028	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	10043416	G	A	0.00052	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	75118856	T	C	1.43220E-05	HK2	+	FALSE	(ATTTTA)n	SINE,Alu
chr3	42643425	G	A	0.00482	NKTR	+	FALSE	L2a	SINE,Alu
chr3	39452123	G	A	0.00093	RPSA	+	FALSE
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr6	24780892	A	C	0.00246	GMNN	+	FALSE
chr1	35650014	C	A	0.00012	SFPQ	-	FALSE
chr1	998582	G	C	0.00073		.	FALSE
chr3	179506482	A	G	0.00017	USP13	+	FALSE	MER33	SINE,Alu
chr1	10521162	T	C	0.00911	DFFA	-	TRUE	AluY	SINE,Alu
chr2	189459785	C	T	0.00262	GULP1	+	FALSE
chr1	220231982	T	C	0.00328	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr1	204520442	A	G	7.81381E-05	MDM4	+	TRUE	AluJb	SINE,Alu
chr1	16890286	C	T	3.65680E-06	NBPF1	-	FALSE
chr1	168218573	A	G	0.00202		.	FALSE	AluSz	SINE,Alu
chr1	24296869	G	T	0.00505		.	FALSE	AluSg	SINE,Alu
chr17	49042395	T	C	0.00326	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	6283264	T	C	5.77123E-05	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	84670484	T	C	0.00324	SUCLG1	-	TRUE
chr1	53291408	A	G	0.00931	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	10517653	T	C	1.73226E-05		.	FALSE	AluSx1	SINE,Alu
chr14	70838369	T	C	0.00015	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr1	160966351	T	C	0.00023	F11R	-	TRUE	AluSg	SINE,Alu
chr1	45244411	C	A	0.00362	RPS8	+	FALSE
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr1	10517672	T	C	0.00090		.	FALSE	AluSx1	SINE,Alu
chr16	90037828	G	A	0.00029	CENPBD1	-	FALSE	Tigger12	SINE,Alu
chr5	10265488	A	G	0.00120	CCT5	+	FALSE
chr4	56294560	A	G	0.00965	CLOCK	-	FALSE
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr1	142700116	C	T	0.00081	ANKRD20A12P	-	FALSE
chr1	145311900	C	T	0.00011	NBPF20,NBPF10	+	FALSE
chr1	95362952	T	C	0.00155	CNN3	-	FALSE
chr11	72003767	C	A	0.00297	CLPB	-	FALSE
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr4	141600320	A	G	0.00179	TBC1D9	-	FALSE
chr1	180082703	C	A	2.04280E-05	CEP350	+	FALSE
chr2	70131964	A	C	0.00351	SNRNP27	+	FALSE	L1ME4a	SINE,Alu
chr5	34189578	T	C	0.00378		.	FALSE
chr1	87328396	A	T	0.00148	SEP15	-	FALSE
chr1	145689611	C	A	0.00104	NBPF20,NBPF10	+	FALSE	AluSg	SINE,Alu
chr19	45406536	G	T	0.00518	TOMM40	+	FALSE
chr5	6372180	C	T	0.00034	MED10	-	FALSE
chr22	39069181	T	C	0.00346	CBY1	+	FALSE
chr1	225156655	C	T	0.00671	DNAH14	+	FALSE
chr2	37331116	T	C	0.00481		.	FALSE	AluSx1	SINE,Alu
chr4	1388115	C	G	0.00682	CRIPAK	+	FALSE	L1MB4	SINE,Alu
chr2	208619699	A	G	0.00741	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	1431165	C	T	0.00392	ATAD3B	+	FALSE
chr3	15838717	A	C	0.00673	ANKRD28	-	FALSE	(A)n	SINE,Alu
chr1	27181647	G	A	0.00103	ZDHHC18	+	FALSE
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr8	48890247	A	G	2.58682E-14	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	210416438	C	A	0.00085	SERTAD4	+	FALSE
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr1	16921146	T	C	0.00835	NBPF1	-	FALSE
chr2	206986245	T	C	0.00304		.	FALSE	AluSz	SINE,Alu
chr3	126755134	C	T	0.00920	PLXNA1	+	FALSE
chr1	19542464	T	C	0.00736	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr9	133777993	G	T	0.00959	FIBCD1	-	FALSE
chr6	33269307	T	C	0.00645		.	FALSE	AluSx	SINE,Alu
chr1	38327584	T	C	0.00017	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	28825418	A	G	0.00046	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr11	3716835	C	T	0.00828	NUP98	-	FALSE
chr3	179117128	T	C	0.00112	GNB4	-	TRUE	AluSz	SINE,Alu
chr7	2290637	C	T	0.00956	NUDT1	+	FALSE
chr1	109818161	C	T	6.45247E-05	CELSR2	+	FALSE
chr12	98943182	A	G	1.41026E-08	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	31344952	C	T	0.00544	SDC3	-	FALSE
chr1	25894464	G	A	0.00527	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr16	29454768	A	G	0.00564	SMG1P6,BOLA2-SMG1P6	-	FALSE
chr1	67874689	T	C	0.00338	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	36602178	A	T	0.00764	TRAPPC3	-	FALSE
chr1	145290818	C	G	0.00287	NBPF20	+	FALSE
chr4	170643973	C	T	0.00232	CLCN3	+	FALSE
chr1	97543764	C	T	0.00353	DPYD	-	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr3	186502665	C	T	0.00637	EIF4A2	+	FALSE
chr1	32385070	T	A	0.00593	PTP4A2	-	FALSE
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	15989141	C	G	0.00677		.	FALSE
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr7	99006740	G	A	0.00269	BUD31	+	FALSE
chr1	144598726	A	C	0.00325	NBPF20	+	FALSE
chr19	62927	G	A	0.00358	WASH5P	-	FALSE
chr17	73885274	T	C	0.00143	TRIM65	-	TRUE	AluSg	SINE,Alu
chr1	205583610	T	C	0.00501	ELK4	-	FALSE
chr19	65139	A	G	0.00777	WASH5P	-	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr4	1305799	C	T	0.00271	MAEA	+	FALSE
chr2	85773689	T	C	0.00104	GGCX	-	TRUE	AluSx1	SINE,Alu
chr3	191115082	G	C	0.00037	CCDC50	+	FALSE
chr1	153585584	G	A	0.00011	S100A16	-	FALSE
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	55207988	G	A	0.00914	MROH7-TTC4,TTC4	+	FALSE
chr1	145291494	A	G	0.00738	NBPF20	+	FALSE	MIRb	SINE,Alu
chr7	75677504	C	T	0.00768	MDH2	+	FALSE
chr1	36392543	G	T	0.00971		.	FALSE	(T)n	SINE,Alu
chr1	26608009	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	193222534	G	T	0.00504	CDC73	+	FALSE	(TGT)n	SINE,Alu
chr5	70248478	G	A	0.00229	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr11	133689	G	A	0.00856		.	FALSE	AluJb	SINE,Alu
chr1	100150196	A	G	0.00176	PALMD	+	TRUE	AluJr	SINE,Alu
chr1	36068237	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	197611262	A	G	0.00208		.	FALSE	AluSx1	SINE,Alu
chr1	118502087	C	T	0.00585	WDR3,SPAG17	+,-	FALSE
chr2	47401264	C	G	9.89170E-05	CALM2	-	FALSE
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr1	114443458	A	G	0.00320	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr17	57279253	A	G	1.08987E-07	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	200522059	A	T	0.00163	KIF14	-	FALSE	AluSg	SINE,Alu
chr3	127790249	A	G	0.00056	RUVBL1,SEC61A1	+,-	FALSE
chr1	16133912	T	C	0.00126	UQCRHL	-	TRUE
chr1	47716046	A	T	0.00696	STIL	-	FALSE
chr1	3654747	C	A	0.00691	TP73-AS1	-	FALSE
chr1	165877575	A	C	0.00675	UCK2	+	FALSE
chr1	145511929	A	G	0.00028	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	28832533	G	A	0.00761	SNHG3,RCC1	+	FALSE
chr3	124948049	T	C	0.00709	ZNF148	-	TRUE
chr1	145376020	G	A	0.00478	NBPF20,NBPF10	+	FALSE
chr1	6283332	T	C	0.00387	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr1	33148691	A	G	0.00117	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	155456608	A	G	0.00734	PLRG1	-	FALSE	L1MC5	SINE,Alu
chr2	219146868	T	C	0.00764	PNKD,TMBIM1	+,-	FALSE
chr1	24128467	C	T	0.00086	HMGCL	-	FALSE
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr2	109374952	A	G	0.00031	RANBP2	+	FALSE
chr16	747231	T	G	0.00269	FBXL16	-	FALSE
chr1	220970028	A	G	0.00444	MARC1	+	FALSE
chr1	10518875	T	C	0.00127		.	FALSE	AluSx1	SINE,Alu
chr7	129472357	A	G	0.00287	UBE2H	-	FALSE
chr1	214524556	T	C	0.00730	PTPN14	-	TRUE	AluSg	SINE,Alu
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr1	109737090	G	A	0.00173	KIAA1324	+	FALSE
chr1	10517952	C	A	0.00341		.	FALSE
chr1	10459165	G	A	2.83145E-06	PGD	+	FALSE
chr1	145688664	A	T	0.00679	NBPF20,NBPF10,RNF115	+	FALSE
chr1	19542354	T	C	0.00684	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	10193796	A	G	2.82806E-06	VHL	+	TRUE	AluSx	SINE,Alu
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr1	33149256	A	G	0.00010	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	36068325	T	C	3.42972E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	208619320	A	G	0.00339	CCNYL1	+	FALSE	EutTc1-N1	SINE,Alu
chr3	170114078	A	C	0.00219	SKIL	+	FALSE
chr2	164466037	A	T	0.00090	FIGN	-	FALSE
chr5	40826639	A	G	0.00978	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr1	179326296	A	G	0.00171	SOAT1	+	TRUE
chr4	88059663	G	T	0.00165	AFF1	+	FALSE	(GT)n	SINE,Alu
chr6	33384326	A	T	0.00678		.	FALSE
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	194124624	C	T	0.00502	ATP13A3	-	FALSE
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	158170017	T	C	0.00662	GALNT5	+	FALSE
chr1	153907287	G	C	0.00159	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr9	115447531	T	C	0.00164	INIP	-	TRUE	AluJb	SINE,Alu
chr15	90819418	A	G	0.00516		.	FALSE	AluSx	SINE,Alu
chr2	11323108	T	A	0.00100	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	6697343	C	T	0.00054	DNAJC11	-	FALSE
chr9	100777784	T	A	0.00080	ANP32B	+	FALSE
chr1	3729217	T	C	0.00030	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	237035915	C	G	0.00348	AGAP1	+	FALSE
chr2	206987223	T	C	0.00532		.	FALSE	AluSx	SINE,Alu
chr14	19686757	A	G	0.00565	DUXAP10	+	FALSE
chr1	65692499	C	T	0.00235	AK4	+	FALSE	(T)n	SINE,Alu
chr7	64441627	G	A	0.00478	ZNF117	-	FALSE
chr1	28662199	A	G	0.00011	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr1	160965379	T	C	0.00477	F11R	-	TRUE	AluSc	SINE,Alu
chr1	53289547	A	G	0.00505	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr3	52084040	C	T	4.81509E-06	DUSP7	-	FALSE
chr3	45722055	A	G	0.00835	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	227847344	T	C	0.00205	ZNF678	+	FALSE
chr8	95805038	A	G	1.06873E-05	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr5	1317949	C	T	0.00173	CLPTM1L	-	FALSE
chr2	64859679	T	C	0.00824	SERTAD2	-	FALSE
chr2	99812447	A	G	0.00525	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	19543361	A	T	0.00076	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr19	59095449	A	G	6.25071E-06	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr1	201846635	A	T	0.00293	IPO9	+	FALSE	(CA)n	SINE,Alu
chr2	97884961	G	A	0.00668	ANKRD36	+	FALSE
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr1	144874760	T	C	0.00267	NBPF20,PDE4DIP	+,-	FALSE
chr1	156011444	T	C	0.00483	UBQLN4	-	FALSE
chr6	42855200	A	G	2.13337E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	17962998	T	A	0.01000	GEN1	+	FALSE
chr1	179044252	A	G	0.00801	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	36390527	A	G	0.00065		.	FALSE	L2c	SINE,Alu
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr1	200375846	G	T	0.00061	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	118166877	C	T	0.00980	FAM46C	+	FALSE
chr19	7084638	A	G	0.00508	ZNF557	+	TRUE	AluJb	SINE,Alu
chr15	89803950	C	T	0.00698	FANCI	+	FALSE
chr1	32799437	C	T	0.00318	MARCKSL1	-	FALSE
chr3	155660961	A	G	6.62819E-05		.	FALSE	AluSz	SINE,Alu
chr12	69237053	A	G	0.00331	MDM2	+	TRUE
chr1	186370281	C	G	0.00387	C1orf27,OCLM	+	FALSE
chr1	87573348	C	A	0.00879	HS2ST1	+	FALSE
chr1	1252349	A	G	0.00798	CPSF3L	-	FALSE	AluJr	SINE,Alu
chr17	79476999	G	T	6.09622E-06	ACTG1	-	FALSE
chr2	128064446	G	T	0.00652	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr6	52442880	G	T	5.05556E-08	TRAM2-AS1	+	FALSE
chr1	10517672	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr12	133297966	A	G	0.00000	PGAM5	+	FALSE	AluJo	SINE,Alu
chr2	128952075	A	G	0.00919	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr6	132617374	C	G	0.00062	MOXD1	-	FALSE
chr2	217366191	T	A	0.00306		.	FALSE
chr4	17629921	A	G	0.00454		.	FALSE	MER90	SINE,Alu
chr1	20976163	C	T	0.00174	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	64479079	G	A	0.00452	LOC100507006	+	FALSE
chr3	122283292	C	G	0.00047	DTX3L,PARP9	+,-	FALSE
chr1	1647893	C	T	0.00509	CDK11B,CDK11A	-	FALSE
chr16	5134599	G	C	0.00355	ALG1,EEF2KMT	+,-	FALSE
chr1	228880098	T	A	4.07865E-05	RHOU	+	FALSE
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr1	40705200	G	A	3.20116E-08	RLF	+	FALSE
chr16	1411034	A	G	0.00322	GNPTG	+	TRUE	AluSz	SINE,Alu
chr1	144918957	T	A	0.00484	NBPF20,PDE4DIP	+,-	FALSE
chr1	10517290	T	C	0.00437		.	FALSE	AluJr	SINE,Alu
chr12	42719890	A	G	0.00730	ZCRB1	-	FALSE
chr2	32535836	A	G	0.00163		.	FALSE	AluJb	SINE,Alu
chr7	29960211	C	A	0.00034	SCRN1	-	FALSE
chr4	10442610	T	C	0.00174	ZNF518B	-	FALSE
chr1	157963370	C	G	0.00445	KIRREL	+	FALSE
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr2	207146631	C	A	9.52905E-05	ZDBF2	+	FALSE
chr1	10221302	G	A	0.00119	UBE4B	+	FALSE
chr1	200375418	C	T	0.00425	ZNF281	-	FALSE
chr1	25570566	C	G	0.00326	RSRP1	-	FALSE	Alu	SINE,Alu
chr2	217366896	A	G	0.00457		.	FALSE	AluSz6	SINE,Alu
chr3	155660833	A	G	0.00020		.	FALSE	AluSz	SINE,Alu
chr1	167973198	A	G	0.00061	DCAF6	+	FALSE
chr17	34942575	G	A	0.00374	GGNBP2	+	FALSE	A-rich	SINE,Alu
chr1	166820104	G	A	0.00477	POGK	+	FALSE	MER1B	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr1	67874689	T	C	0.00053	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	16957414	C	T	0.00708		.	FALSE
chr2	198416726	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	20976211	T	C	0.00833	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr12	56510710	A	C	0.00050	RPL41	+	FALSE
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr14	31916782	T	C	4.67250E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	36067870	T	C	0.00513	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1344757	A	G	0.00024		.	FALSE	AluSx1	SINE,Alu
chr5	154194476	T	A	0.00611	LARP1	+	FALSE
chr12	98942824	A	G	2.17067E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr8	101269589	A	T	0.00281	RNF19A	-	FALSE
chr7	123390058	A	G	0.00102		.	FALSE
chr1	146467146	A	G	0.00510	NBPF20,NBPF25P,NBPF12	+	TRUE	L1MC4	SINE,Alu
chr1	200589540	T	A	0.00151	KIF14	-	FALSE
chr1	19543457	T	C	0.00362	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	208466270	A	G	0.00713	CREB1,METTL21A	+,-	FALSE
chr5	40830064	T	C	0.00554		.	FALSE	AluSp	SINE,Alu
chr1	145442111	C	A	0.00090	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	149913727	T	C	0.00721	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	145689843	A	G	4.95254E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr7	148700782	G	A	0.00209	PDIA4	-	FALSE
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr2	64119873	A	T	0.00492	VPS54	-	FALSE
chr1	24287616	G	A	0.00218	PNRC2	+	FALSE
chr1	9161203	T	C	3.69156E-05		.	FALSE	AluSx	SINE,Alu
chr2	227600369	A	G	0.00577	IRS1	-	FALSE
chr1	6681544	T	C	0.00031	PHF13	+	FALSE
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr1	16913677	T	C	0.00638	NBPF1	-	FALSE
chr1	93616202	T	C	0.00194	TMED5	-	FALSE
chr3	33893987	A	G	0.00123	PDCD6IP	+	FALSE
chr1	150281017	A	G	0.00057	MRPS21	+	TRUE	AluSz	SINE,Alu
chr2	11323106	G	T	0.00860	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	153512503	C	T	0.00082	PRPF40A	-	FALSE
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr6	42857111	A	G	0.00681	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr1	26755643	A	G	0.00728	LIN28A	+	FALSE	AluSc	SINE,Alu
chr17	41133087	A	G	0.00141	RUNDC1	+	FALSE
chr1	1650801	T	C	0.00827	CDK11B,CDK11A	-	FALSE
chr17	43364293	C	G	0.00144	MAP3K14	-	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr1	100489835	A	G	0.00043	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr1	148561089	T	C	0.00011	NBPF15	+	FALSE
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr1	16893691	C	A	0.00764	NBPF1	-	FALSE
chr5	177576460	C	T	0.00635		.	FALSE
chr1	6583036	T	C	0.00296	NOL9	-	TRUE	AluSx4	SINE,Alu
chr10	117823569	G	A	0.00391	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr2	37429627	A	G	0.00027	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr11	60658566	A	C	0.00387	PRPF19	-	FALSE
chr3	72425248	T	A	0.00281	RYBP	-	FALSE
chr1	148251009	T	C	0.00065	NBPF8,NBPF14,NBPF9	-	TRUE
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr1	36067677	T	C	0.00017	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr6	3225721	C	G	4.80019E-07	TUBB2B	-	FALSE
chr2	37479862	C	T	0.00603	PRKD3	-	FALSE
chr1	60340527	G	A	0.00027	HOOK1	+	FALSE
chr1	36068281	T	C	0.00026	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr2	242447628	T	G	0.00674	STK25	-	FALSE
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	54887287	C	T	7.50624E-05	SPTBN1	+	FALSE
chr2	131129926	G	T	0.00034	PTPN18	+	FALSE
chr1	36067925	T	C	1.81623E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	37290496	T	C	0.00410		.	FALSE	AluSz	SINE,Alu
chr2	206986988	T	C	0.00957		.	FALSE	AluJr	SINE,Alu
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr1	93308173	T	G	0.00380	FAM69A	-	FALSE
chr19	58375707	A	G	0.00156	ZNF587	+	TRUE	AluSg	SINE,Alu
chr21	34729931	A	G	0.00040	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr3	10193797	A	G	0.00199	VHL	+	TRUE	AluSx	SINE,Alu
chr6	34249357	T	A	0.00373		.	FALSE
chr1	200521412	G	A	0.00110	KIF14	-	FALSE
chr2	191366707	A	G	0.00900	MFSD6	+	FALSE
chr6	7250960	G	A	0.00889	RREB1	+	FALSE
chr1	15668319	G	A	0.00489	FHAD1	+	FALSE
chr2	132049924	A	G	0.00338	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr1	3545183	A	T	0.00347	TPRG1L	+	FALSE
chr1	65879488	A	C	0.00560	DNAJC6	+	FALSE
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr19	14203874	A	C	0.00870	PRKACA	-	FALSE	(A)n	SINE,Alu
chr1	168218494	A	G	0.00317		.	FALSE	AluSz	SINE,Alu
chr12	32532505	G	A	0.00385		.	FALSE
chr1	19543352	T	C	0.00715	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10519048	T	C	0.00089		.	FALSE	AluSx3	SINE,Alu
chr7	138740037	G	C	0.00598	ZC3HAV1	-	FALSE
chr1	33148287	A	G	0.00052	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	226352498	T	G	0.00636	ACBD3	-	FALSE
chr1	179042555	A	G	0.00922	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr3	100084432	G	A	0.00321	TOMM70	-	FALSE
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr1	205737682	A	G	0.00320	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	148241604	G	T	0.00756	NBPF8	-	FALSE	U1	SINE,Alu
chr2	61705068	A	T	0.00103		.	FALSE
chr15	63111739	T	C	0.00914	TLN2	+	FALSE
chr1	1595604	A	T	0.00233	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr4	56291623	G	T	0.00490	TMEM165	+	FALSE
chr1	10520296	T	C	0.00765		.	FALSE	AluSx	SINE,Alu
chr1	20826781	C	T	0.00296	MUL1	-	FALSE
chr1	10518797	T	C	0.00421		.	FALSE	AluSx1	SINE,Alu
chr2	174090631	A	C	0.00038	ZAK,MLK7-AS1	+,-	FALSE
chr1	9324213	C	T	0.00063	H6PD	+	FALSE
chr1	156613401	T	C	5.47226E-05	BCAN	+	FALSE
chr1	28826118	A	G	0.00039	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	180063334	G	A	2.71425E-05	CEP350	+	FALSE
chr1	1594977	T	C	0.00749	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	15818065	T	C	0.00372	CASP9	-	TRUE	AluJb	SINE,Alu
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	17345245	C	T	0.00701	SDHB	-	FALSE
chr1	112266787	G	T	0.00873	FAM212B	-	FALSE
chr1	17395521	G	A	0.00788	PADI2	-	FALSE
chr1	27202835	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr2	176792531	C	T	0.00779	LNPK	-	FALSE
chr1	84373309	T	C	0.00627	TTLL7	-	FALSE
chr6	122765962	T	A	0.00362	SERINC1	-	FALSE
chr17	17425631	C	T	0.00036	PEMT	-	FALSE
chr6	90344221	T	C	0.00809	LYRM2	-	TRUE	AluJo	SINE,Alu
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr6	11577085	C	T	1.34362E-05	TMEM170B	+	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr1	36529549	A	G	0.00806		.	FALSE	AluJr	SINE,Alu
chr1	169799880	G	T	0.00118	C1orf112	+	FALSE
chr2	179969921	A	T	0.00203	SESTD1	-	FALSE
chr2	206981835	T	C	0.00047		.	FALSE	AluJb	SINE,Alu
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr5	37290400	T	C	0.00282		.	FALSE	AluSz	SINE,Alu
chr1	32373854	A	T	0.00096	PTP4A2	-	FALSE
chr1	19565338	C	T	0.00631	LOC101927895,EMC1	+,-	FALSE
chr1	144606838	A	G	0.00988	NBPF20	+	FALSE
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	79108421	A	T	7.77428E-05	IFI44L	+	FALSE
chr16	75479891	T	C	9.48885E-06	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	19543249	T	C	0.00559	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr1	16932495	A	C	0.00199	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	183900729	T	C	0.00074	AP2M1	+	FALSE	MIR3	SINE,Alu
chr7	137561077	C	A	0.00995	CREB3L2	-	FALSE
chr1	9989022	A	G	0.00616	LZIC	-	FALSE	L1MB5	SINE,Alu
chr1	10521238	T	C	0.00797	DFFA	-	TRUE	AluY	SINE,Alu
chr1	155851645	A	G	4.46102E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr12	54526562	A	T	0.00119	LOC400043	+	FALSE	L2a	SINE,Alu
chr1	45226084	G	A	0.00970	KIF2C	+	FALSE
chr2	37327666	T	C	0.00028		.	FALSE
chr1	24934334	A	G	0.00031	NCMAP	+	TRUE	AluSz6	SINE,Alu
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr3	194999609	G	T	0.00796	ACAP2	-	FALSE
chr5	43377330	T	C	0.00039	CCL28	-	TRUE	AluSz	SINE,Alu
chr2	217123958	T	C	0.00012	MARCH4	-	FALSE
chr1	33066859	A	G	0.00403	ZBTB8A	+	TRUE	AluSq4	SINE,Alu
chr1	109476780	C	T	0.00990	GPSM2,CLCC1	+,-	FALSE
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr4	103731698	T	C	0.00029	UBE2D3	-	TRUE	AluYk2	SINE,Alu
chr17	57281021	A	G	1.37320E-05	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	108114598	C	T	0.00863	VAV3	-	FALSE
chr1	112266790	C	T	0.00892	FAM212B	-	FALSE
chr9	103064530	G	A	0.00036	TEX10	-	FALSE
chr5	72801323	C	A	0.00119	BTF3	+	FALSE
chr2	37330476	T	C	2.74271E-05		.	FALSE	AluSq2	SINE,Alu
chr2	201774341	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr5	96350710	G	A	0.00302	LNPEP	+	FALSE
chr1	67874696	T	C	0.00098	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	24710405	A	G	0.00246	STPG1	-	FALSE
chr4	248996	A	G	0.00123	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr2	54858511	C	T	0.00124	SPTBN1	+	FALSE
chr2	87821033	C	A	0.00474		.	FALSE
chr7	100804140	C	T	0.00377	AP1S1	+	FALSE
chr10	1086801	G	C	0.00421	IDI2-AS1,IDI1	+,-	FALSE
chr1	9162348	T	C	0.00023		.	FALSE	AluSx	SINE,Alu
chr1	110466466	T	C	0.00377	CSF1	+	FALSE
chr1	33960062	A	G	0.00437	ZSCAN20	+	FALSE

RBP	RPS2
Knock-Method	shRNA
RBP Family	Ribosomal_S5
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR667RIA
Platform	HiSeq
Pubmed ID	32252787

RPS2 - Target Gene Network