RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	52251222	G	T	0.00808		.	FALSE	(GATA)n	SINE,Alu
chr1	145369556	A	G	0.00086	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	145688664	A	T	0.00679	NBPF20,NBPF10,RNF115	+	FALSE
chr1	28826130	A	G	0.00207	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	204301753	T	A	0.00012	RAPH1	-	FALSE
chr1	53712215	G	T	0.00458	LRP8	-	FALSE
chr1	1650832	A	G	0.00065	CDK11B,CDK11A	-	FALSE
chr1	23689522	G	T	0.00570	ZNF436	-	FALSE
chr1	154454628	T	C	0.00099	SHE	-	TRUE	AluSq2	SINE,Alu
chr12	100556267	T	C	0.00071	GOLGA2P5	-	FALSE
chrX	2824317	T	C	0.00047	ARSD	-	TRUE	AluJb	SINE,Alu
chr11	63724398	T	C	0.00664	NAA40	+	FALSE	AluSx	SINE,Alu
chr1	109535088	G	A	0.00353	WDR47	-	FALSE
chr1	16929100	C	T	0.00249	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr2	216903620	T	C	0.00623	PECR	-	TRUE	AluSx3	SINE,Alu
chr12	56510697	G	A	0.00055	RPL41	+	FALSE
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr1	113212974	A	T	0.00424	CAPZA1	+	FALSE
chr2	46808168	C	T	0.00377	RHOQ	+	FALSE
chr1	1421531	C	A	0.00467	ATAD3B	+	FALSE
chr1	246714587	G	A	0.00150	TFB2M	-	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	202993198	C	A	0.00754	TMEM183A	+	FALSE
chr8	146200283	T	C	0.00082	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	36067925	T	C	0.00103	PSMB2	-	TRUE	AluSz	SINE,Alu
chr17	4928356	A	G	0.00048	KIF1C	+	TRUE	AluSz	SINE,Alu
chr1	19545142	A	G	0.00071	LOC101927895,EMC1	+,-	FALSE
chr14	76680377	T	A	0.00143		.	FALSE	L1M5	SINE,Alu
chrX	123046779	A	G	0.00629	XIAP	+	TRUE	AluSz	SINE,Alu
chr7	29962664	A	C	0.00077	SCRN1	-	FALSE
chr20	35520977	T	C	0.00359	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr5	43575020	T	C	8.37337E-06	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr5	40832550	C	T	7.98859E-06	RPL37	-	FALSE
chr10	79793877	C	T	0.00977	RPS24	+	FALSE
chr12	133298349	A	G	2.42844E-07	PGAM5	+	TRUE	AluSp	SINE,Alu
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr5	205565	G	A	0.00593	CCDC127	-	FALSE
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr1	15993699	C	A	0.00011		.	FALSE	AluSx4	SINE,Alu
chr17	46803538	C	T	0.00492	HOXB13	-	FALSE
chr11	769883	T	C	0.00631	PDDC1	-	TRUE	AluY	SINE,Alu
chr1	45975345	A	G	9.37661E-05	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	10520296	T	C	0.00299		.	FALSE	AluSx	SINE,Alu
chr1	1595048	T	C	0.00495	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	206980072	G	A	1.35396E-05		.	FALSE	MLT1A1	SINE,Alu
chr3	17200672	C	A	0.00665	TBC1D5	-	FALSE
chr1	115259543	C	T	0.00492	CSDE1	-	FALSE
chr4	1228741	G	A	0.00095	CTBP1	-	FALSE
chr8	42884422	A	G	0.00768	HOOK3	+	TRUE	AluSc	SINE,Alu
chr3	12624763	T	C	1.62214E-06	MKRN2	+	FALSE
chr1	54691921	G	A	0.00032	SSBP3	-	FALSE
chr5	79923793	T	C	0.00664	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	151966348	C	T	0.00511	S100A10	-	FALSE
chr1	70718271	G	A	0.00273		.	FALSE
chr1	10364612	A	C	0.00860	KIF1B	+	FALSE
chr1	20975992	T	C	2.78350E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	19653870	T	C	0.00477	PQLC2	+	FALSE
chr6	138734422	C	T	0.00447	HEBP2	+	FALSE
chr1	200522059	A	T	0.00163	KIF14	-	FALSE	AluSg	SINE,Alu
chr3	33909024	A	T	0.00134	PDCD6IP	+	FALSE
chr17	78091513	G	A	0.00810	GAA	+	FALSE
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr2	157440644	G	C	0.00394	GPD2	+	FALSE
chr17	67538540	T	C	0.00295		.	FALSE
chr1	211918115	C	T	0.00979	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr1	148004525	C	T	0.00541	NBPF8	-	FALSE
chr3	15112630	C	T	0.00017	RBSN	-	FALSE	AluSq2	SINE,Alu
chr7	100958270	T	C	0.00087	LOC101927746,IFT22	+,-	FALSE
chr8	145159708	A	G	0.00101	MAF1	+	FALSE
chrX	123046306	A	G	0.00016	XIAP	+	TRUE	AluJb	SINE,Alu
chr14	68144079	G	T	0.00974	RDH11	-	FALSE
chr4	95173779	T	C	0.00771	SMARCAD1	+	FALSE
chr12	9464350	G	C	0.00209	LOC642846	+	FALSE
chr3	149686507	T	C	0.00193	PFN2	-	FALSE
chr2	198339541	C	T	0.00465	COQ10B	+	FALSE	(T)n	SINE,Alu
chr1	109465174	A	C	0.00234	GPSM2	+	FALSE
chr2	54888359	A	G	3.08576E-05	SPTBN1	+	FALSE
chr5	76371820	A	G	0.00162		.	FALSE
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	36534939	A	G	0.00936		.	FALSE	AluJo	SINE,Alu
chr3	99516879	A	T	0.00667	MIR548G	-	FALSE
chr1	94930345	G	A	1.57139E-05	ABCD3	+	FALSE
chr2	37330611	T	C	0.00249		.	FALSE	AluSq2	SINE,Alu
chr1	36534736	A	G	0.00016		.	FALSE	AluJo	SINE,Alu
chr1	10517688	T	C	0.00630		.	FALSE	AluSx1	SINE,Alu
chr2	176792357	A	G	7.02808E-05	LNPK	-	FALSE
chr9	96438975	T	C	0.00042	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr3	10192744	A	G	3.36147E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr12	48175093	A	G	0.00690	SLC48A1	+	FALSE
chr1	35658211	G	T	1.28982E-07	SFPQ	-	FALSE
chr11	68523337	T	C	0.00016	CPT1A	-	TRUE	AluSq	SINE,Alu
chr2	74375276	A	C	0.00328	BOLA3-AS1	+	FALSE
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr4	103718454	T	A	0.00446	LOC102723704,UBE2D3	+,-	FALSE
chr7	6501828	C	A	0.00110	KDELR2	-	FALSE
chr1	156233189	C	T	5.51743E-05	SMG5	-	FALSE
chr2	201774393	T	C	0.00971		.	FALSE	AluSz	SINE,Alu
chr2	37330534	T	C	6.35640E-05		.	FALSE	AluSq2	SINE,Alu
chr7	2290522	C	T	0.00517	NUDT1	+	FALSE
chr9	115447528	T	C	0.00112	INIP	-	TRUE	AluJb	SINE,Alu
chr1	45976265	A	G	0.00657	MMACHC	+	FALSE
chr1	10517691	T	C	0.00558		.	FALSE	AluSx1	SINE,Alu
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE
chr10	61548852	G	A	0.00693	CCDC6	-	FALSE
chr1	145284883	A	G	0.00062	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr2	30864980	A	G	7.96700E-05	LCLAT1	+	FALSE
chr1	11347150	C	A	0.00366	UBIAD1	+	FALSE
chr1	28920901	A	G	0.00405	RAB42	+	FALSE	AluSx	SINE,Alu
chr20	43707842	A	G	0.00100	STK4	+	TRUE	AluJb	SINE,Alu
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr15	41590972	A	G	2.40282E-05	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr1	42881767	G	C	0.00437	RIMKLA	+	FALSE
chr4	39549701	T	C	0.00269	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr1	24288535	A	T	0.00271	PNRC2	+	FALSE
chr2	44115183	T	A	0.00914	LRPPRC	-	FALSE
chr1	145116142	A	T	0.00570	NBPF20,SEC22B	+	FALSE
chr14	70838368	T	C	0.00561	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chr3	183901281	G	A	4.84515E-09	AP2M1	+	FALSE
chrX	123046695	A	G	0.00054	XIAP	+	TRUE	AluSz	SINE,Alu
chr12	125514124	A	G	3.15634E-06		.	FALSE	(TA)n	SINE,Alu
chr6	3021492	A	G	0.00613	HTATSF1P2	-	FALSE	Tigger3a	SINE,Alu
chr10	61548856	T	C	0.00067	CCDC6	-	FALSE
chr1	117117182	C	T	0.00270	IGSF3	-	FALSE
chr1	1595586	T	C	0.00051	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	179044216	A	G	0.00277	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	205686523	G	T	2.43057E-05	NUCKS1	-	FALSE
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr7	6064009	C	G	0.00273	EIF2AK1	-	FALSE
chr2	61277463	A	G	0.00826	PEX13	+	TRUE	AluSx	SINE,Alu
chr16	56510334	T	C	0.00494	OGFOD1	+	FALSE
chr5	149829073	A	G	0.00866	RPS14	-	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr1	10517950	G	C	0.00449		.	FALSE
chr19	9672318	T	C	2.91158E-05		.	FALSE	AluJr	SINE,Alu
chr1	68940566	A	C	0.00126	DEPDC1	-	FALSE
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr1	95660019	G	T	0.00052	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	27202963	C	T	0.00106		.	FALSE	AluSq2	SINE,Alu
chr3	179117033	T	C	0.00019	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	16576836	A	G	0.00885	FBXO42	-	FALSE
chr1	161931167	A	G	0.00251	ATF6	+	FALSE
chr1	46076529	A	G	0.00196	NASP	+	TRUE	AluSx	SINE,Alu
chr1	10517653	T	C	0.00038		.	FALSE	AluSx1	SINE,Alu
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr1	160920966	C	T	0.00980	ITLN2	-	FALSE
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr1	10520178	T	C	0.00112		.	FALSE	AluSx	SINE,Alu
chr1	74672474	G	A	0.00441	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	181058313	G	A	0.00651	IER5	+	FALSE
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr2	120021785	T	C	0.00751	STEAP3	+	FALSE
chr8	25222165	A	G	0.00019	DOCK5	+	FALSE
chr1	8930561	T	G	0.00913	ENO1	-	FALSE
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chr1	10043002	A	G	0.00247	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	61764920	C	A	0.00363	XPO1	-	FALSE
chr1	1252662	T	C	0.00235	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	204520455	T	C	0.00478	MDM4	+	FALSE	AluJb	SINE,Alu
chr1	1252443	T	C	0.00392	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr19	58357211	A	G	0.00041	ZNF587B	+	TRUE	AluSx3	SINE,Alu
chr1	27205634	T	C	0.00025		.	FALSE	FLAM_A	SINE,Alu
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr2	69746296	C	T	0.00620	AAK1	-	FALSE
chr1	36068052	G	T	1.43241E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr17	5288079	A	C	0.00085	RABEP1	+	FALSE
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chr1	36642420	T	C	0.00188	MAP7D1	+	FALSE
chr1	16928622	C	A	0.00197	NBPF1	-	FALSE
chr1	23847464	C	A	0.00895	E2F2	-	FALSE
chr3	42636141	G	A	0.00224	SEC22C,SS18L2	+,-	FALSE
chr19	9672981	T	C	0.00041		.	FALSE	AluSx3	SINE,Alu
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr10	61548855	G	T	0.00070	CCDC6	-	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr4	13604418	G	C	2.95746E-07	BOD1L1	-	FALSE
chr8	144940794	G	C	0.00038	EPPK1	-	FALSE
chr14	62213927	C	A	0.00771	HIF1A,HIF1A-AS2	+,-	FALSE
chr1	26128521	A	G	0.00251	SEPN1	+	TRUE	AluJb	SINE,Alu
chr1	53288894	A	G	0.00066	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	59142713	T	C	0.00078	MYSM1	-	FALSE
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	1684346	G	C	0.00504	NADK	-	FALSE
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr16	10623576	T	C	0.00013	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr15	91044378	C	T	0.00453	IQGAP1	+	FALSE
chr3	48787046	T	C	0.00699	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	32158374	T	C	0.00134	COL16A1	-	FALSE
chr1	10520672	T	C	0.00222	DFFA	-	TRUE	AluSc8	SINE,Alu
chr2	164466037	A	T	0.00090	FIGN	-	FALSE
chr15	52840681	C	T	0.00789	ARPP19	-	FALSE	AluSx1	SINE,Alu
chr4	25278988	T	C	2.09007E-08	PI4K2B	+	FALSE
chr5	41919747	C	T	0.00814	C5orf51	+	FALSE	L2c	SINE,Alu
chr1	16892277	G	T	0.00021	NBPF1	-	FALSE
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr1	1597356	G	C	0.00995	CDK11B,SLC35E2B	-	FALSE
chr1	229652587	T	C	0.00732	ABCB10	-	FALSE
chr1	109465171	T	A	0.00989	GPSM2	+	FALSE
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	1593023	G	C	2.84325E-05	CDK11B,SLC35E2B	-	FALSE
chr2	179973026	T	C	0.00210	SESTD1	-	FALSE
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr15	85184816	T	C	3.05793E-06	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr11	68524809	T	C	0.00129	CPT1A	-	TRUE
chr1	117530273	A	G	0.00270	PTGFRN	+	FALSE
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr3	122291688	A	G	0.00597	DTX3L	+	FALSE	AluSz	SINE,Alu
chr1	3545189	T	G	0.00027	TPRG1L	+	FALSE
chr1	214524531	T	C	0.00753	PTPN14	-	TRUE	AluSg	SINE,Alu
chr12	133297956	A	G	4.23080E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	19545147	T	G	0.00510	LOC101927895,EMC1	+,-	FALSE
chr1	27108245	T	C	0.00265	ARID1A	+	FALSE
chr1	11083183	G	T	0.00342	TARDBP	+	FALSE
chr4	128758152	A	G	0.00198		.	FALSE	AluSx	SINE,Alu
chr2	208620129	A	G	0.00167	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr8	48890114	A	G	2.61683E-11	MCM4	+	TRUE	AluJb	SINE,Alu
chr3	40503554	A	C	0.00197	RPL14	+	FALSE
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr5	204215	A	G	0.00872		.	FALSE	MER68	SINE,Alu
chr1	109856085	G	A	0.00684	SORT1	-	FALSE
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr18	33831189	C	A	0.00763	MOCOS	+	FALSE
chr1	197475873	G	A	0.00844	DENND1B	-	FALSE
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr1	156084582	T	C	0.00195	LMNA	+	FALSE
chr12	125269489	C	T	0.00817	SCARB1	-	FALSE
chr3	44790781	T	C	0.00887	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	24289057	G	C	0.00044	PNRC2	+	FALSE
chr1	28825331	A	G	0.00051	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	99772813	A	G	0.00670	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr22	41252612	G	A	0.00561	ST13	-	FALSE
chr3	195776630	T	A	7.10429E-08	TFRC	-	FALSE
chr2	17897488	T	C	0.00430	SMC6	-	FALSE
chr2	33007710	C	T	0.00743	TTC27	+	FALSE
chr1	24086788	C	T	0.00040	TCEB3	+	FALSE
chr2	10567337	G	C	0.00940	HPCAL1	+	FALSE
chr5	56177849	C	G	0.00921	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	29644328	C	T	0.00014	PTPRU	+	FALSE
chr1	226172221	T	C	0.00030	SDE2	-	FALSE	L1MEf	SINE,Alu
chr1	94335191	C	T	0.00382	DNTTIP2	-	FALSE
chr1	92976590	G	A	0.00629	EVI5	-	FALSE
chr1	17393261	T	C	3.60266E-05	PADI2	-	FALSE
chr1	64125439	A	C	3.63698E-07	PGM1	+	FALSE
chr1	19543799	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	212459257	A	G	0.00068	PPP2R5A	+	FALSE
chr17	72206017	T	A	6.66319E-05	RPL38	+	FALSE
chr1	201846617	A	C	0.00380	IPO9	+	FALSE	(CA)n	SINE,Alu
chr14	75202963	A	G	2.20276E-06	FCF1	+	TRUE	AluSx	SINE,Alu
chr4	52888499	G	A	8.91315E-05	SGCB	-	FALSE
chr1	70718269	A	G	0.00234		.	FALSE
chr1	6259433	G	A	0.00522	RPL22	-	FALSE	G-rich	SINE,Alu
chr2	8823941	G	A	0.00053	ID2	+	FALSE
chr9	132268442	A	G	0.00642	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	100489619	A	G	0.00319	SLC35A3	+	TRUE
chr3	49506286	G	T	0.00052	DAG1	+	FALSE	AluJb	SINE,Alu
chr4	6718811	A	G	1.36854E-07	BLOC1S4	+	FALSE	FLAM_A	SINE,Alu
chr7	91502407	C	G	0.00183	MTERF1	-	FALSE
chr1	19542250	T	C	0.00859	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	24288530	A	T	0.00031	PNRC2	+	FALSE
chr2	132481470	C	T	0.00594	C2orf27A	+	FALSE
chr3	148748380	T	C	0.00240	HLTF	-	FALSE
chr16	48386354	A	G	0.00064	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr1	33961147	T	G	0.00911	ZSCAN20	+	FALSE
chr3	172115465	T	A	0.00170	FNDC3B	+	FALSE
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr1	148252785	T	C	0.00314	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	19543247	T	C	4.83051E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	128063697	G	A	0.00775	MAP3K2	-	FALSE
chr2	86731651	G	A	0.00378	CHMP3,RNF103-CHMP3	-	FALSE
chr1	144931392	G	A	0.00241	NBPF20,PDE4DIP	+,-	FALSE
chr6	134492482	A	C	0.00108	SGK1	-	FALSE
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr1	3731655	G	T	0.00985	CEP104	-	FALSE
chr1	65297860	A	T	0.00847	RAVER2	+	FALSE
chr1	249139806	G	A	0.00983	ZNF672	+	FALSE
chr5	180669695	T	C	0.00101	RACK1	-	TRUE	AluSx1	SINE,Alu
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	54563156	A	G	3.59804E-06	TCEANC2	+	FALSE
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr1	220232066	T	C	0.00673	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	78414285	T	A	0.00256	FUBP1	-	FALSE
chr1	16889502	T	C	0.00468	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr3	45960560	T	A	0.00201	FYCO1	-	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr1	36067886	T	C	0.00150	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	145273345	T	C	0.00640	NBPF20,NOTCH2NL	+	FALSE
chr2	55516902	G	A	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	203839213	T	A	0.00800	SNRPE	+	FALSE
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr1	25894467	A	T	0.00136	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	155144757	T	C	0.00758	KRTCAP2	-	FALSE	Tigger19b	SINE,Alu
chr2	209221291	T	G	0.00020	PIKFYVE	+	FALSE	AluSx	SINE,Alu
chr2	202038524	A	G	0.00382		.	FALSE	AluSx1	SINE,Alu
chr3	98517013	T	C	1.12976E-12	DCBLD2	-	FALSE
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	180859304	T	C	2.77658E-06	XPR1	+	FALSE
chr14	20770036	T	C	0.00217	TTC5	-	FALSE
chr1	11347155	C	T	0.00366	UBIAD1	+	FALSE
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr15	23282589	A	G	0.00291	HERC2P2	-	FALSE
chr12	56215102	T	A	0.00405	DNAJC14	-	FALSE
chr3	73024350	C	A	0.00109	GXYLT2	+	FALSE
chr8	128752685	G	A	0.00000	MYC	+	FALSE
chr12	104186946	G	T	0.00523	NT5DC3	-	FALSE
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr1	40705200	G	A	3.20116E-08	RLF	+	FALSE
chr1	101444065	T	C	0.00927	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr15	59428230	G	A	0.00891	MYO1E	-	FALSE	MLT1B	SINE,Alu
chr1	36644564	C	T	1.56500E-06	MAP7D1	+	FALSE
chr2	206987629	T	C	0.00491		.	FALSE	AluJb	SINE,Alu
chr18	47920424	A	G	0.00000	SKA1	+	FALSE	MER21C	SINE,Alu
chr1	25570561	T	A	0.00425	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	40538317	C	A	0.00178	CAP1	+	FALSE
chr1	214529740	T	C	0.00356	PTPN14	-	TRUE
chr1	36068364	T	C	0.00013	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr2	191224981	G	T	0.00676	INPP1	+	FALSE
chr1	33146255	C	A	0.00182	SYNC,RBBP4	+,-	FALSE
chr17	42880190	T	C	0.00284	GJC1	-	TRUE	AluJb	SINE,Alu
chr3	10143199	A	G	0.00496	FANCD2,FANCD2OS	+,-	FALSE	AluSc8	SINE,Alu
chr12	133334975	T	C	0.00070	ANKLE2	-	TRUE	AluSz	SINE,Alu
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	1668943	A	C	0.00640	SLC35E2	-	FALSE
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr15	85185045	T	C	0.00210	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr7	21941589	T	A	0.00535	CDCA7L	-	FALSE
chr2	37327670	T	C	0.00021		.	FALSE
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr14	23794557	T	A	0.00983	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr5	175811093	A	G	0.00730	NOP16	-	FALSE
chr5	34906156	T	C	2.52494E-05	RAD1	-	TRUE	AluSx1	SINE,Alu
chr2	170103351	G	T	0.00139	LRP2	-	FALSE
chr3	10193797	A	G	0.00261	VHL	+	TRUE	AluSx	SINE,Alu
chr1	45476889	C	G	0.00969	HECTD3	-	FALSE
chr1	53291420	A	G	0.00069	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	36067760	T	C	1.59237E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	53841241	T	A	0.00179	SNX18	+	FALSE
chr3	42826041	T	G	0.00019	HIGD1A	-	FALSE
chr1	10517526	T	C	0.00364		.	FALSE	AluSx1	SINE,Alu
chr6	3266908	G	A	0.00974	PSMG4	+	FALSE
chr1	36068369	T	C	5.31121E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr6	150045926	T	C	0.00053	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	145369354	C	T	0.00872	NBPF20,NBPF10	+	FALSE
chr5	34906692	T	C	0.00021	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	36529575	A	G	2.40551E-05		.	FALSE	AluJr	SINE,Alu
chr3	27674782	A	G	0.00630		.	FALSE
chr4	39550085	T	C	3.55103E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	204095426	C	T	0.00481	SOX13	+	FALSE
chr2	47604176	C	T	0.00328	EPCAM	+	FALSE
chr1	67874705	T	C	0.00015	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	46165437	T	C	0.00090	IPP	-	TRUE	FRAM	SINE,Alu
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr3	160219829	C	T	0.00654	KPNA4	-	FALSE	(TA)n	SINE,Alu
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr1	144606963	G	T	0.00965	NBPF20	+	FALSE
chr1	1252468	T	C	0.00096	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr1	16933110	T	C	0.00821	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr3	107763040	G	A	1.74111E-05	CD47	-	FALSE
chr2	62095566	C	T	0.00471	CCT4	-	FALSE
chr1	43391823	C	T	0.00718	SLC2A1	-	FALSE
chr3	24019989	C	T	0.00339	NR1D2	+	FALSE
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr1	10519064	T	C	0.00515		.	FALSE	AluSx3	SINE,Alu
chr1	150446673	A	G	2.11627E-07	RPRD2	+	FALSE
chr13	21547679	A	G	0.00233	LATS2	-	FALSE
chr1	175129946	C	T	0.00466	KIAA0040	-	FALSE	(TCT)n	SINE,Alu
chr1	9161245	T	C	0.00480		.	FALSE	AluSx	SINE,Alu
chr1	12071680	A	G	0.00985	MFN2	+	FALSE
chr1	9330740	G	C	0.00077	H6PD	+	FALSE
chr1	225678219	T	C	0.00080	ENAH	-	TRUE	AluSx	SINE,Alu
chr6	3021465	T	C	0.00029	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	154440548	G	T	0.00123	IL6R	+	FALSE	(TTGTT)n	SINE,Alu
chr17	78226862	A	C	0.00590	SLC26A11	+	FALSE
chr3	14986098	T	C	3.23580E-05	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	75779650	G	C	0.00116	ZNF717	-	FALSE
chr17	57279323	A	G	0.00159	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	46077345	A	G	0.00024	NASP	+	TRUE	AluSc8	SINE,Alu
chr7	6501820	A	T	0.00531	KDELR2	-	FALSE
chr3	48787684	T	C	0.00494	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr3	5258236	G	C	3.37681E-06	EDEM1	+	FALSE
chr2	73460299	G	C	0.00180	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	19984107	G	A	0.00963	MINOS1-NBL1,NBL1	+	FALSE
chr2	86252112	T	C	0.00233	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr19	21131571	A	G	0.00120	ZNF85	+	FALSE
chr1	145513125	A	G	0.00274	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	931935	T	C	0.00913		.	FALSE
chr1	114226255	G	A	0.00381	MAGI3	+	FALSE
chr1	10519888	T	C	0.00218		.	FALSE	AluJr	SINE,Alu
chr2	101587455	C	T	0.00178	NPAS2	+	FALSE
chr8	128752643	G	A	4.26326E-14	MYC	+	FALSE	GA-rich	SINE,Alu
chr3	10192826	A	G	0.00037	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	6165419	C	T	0.00883	CHD5	-	FALSE
chr17	57279281	A	G	0.00918	PRR11	+	TRUE	AluSq2	SINE,Alu
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	206983267	T	C	0.00133		.	FALSE	AluJb	SINE,Alu
chr2	203744550	T	C	0.00037		.	FALSE	AluSx1	SINE,Alu
chr7	29962586	G	A	0.00051	SCRN1	-	FALSE
chr4	128995640	G	A	0.00567	LARP1B	+	FALSE
chr4	76568676	T	A	0.00051	G3BP2	-	FALSE
chr1	86118417	T	G	0.00211	ZNHIT6	-	FALSE
chr3	183900836	G	A	2.54977E-05	AP2M1	+	FALSE
chr2	24225006	A	G	0.00555		.	FALSE	AluSx	SINE,Alu
chr3	30047174	A	T	0.00556	RBMS3	+	FALSE
chr2	37329238	T	C	0.00754		.	FALSE	AluJr4	SINE,Alu
chr1	144931581	C	G	0.00292	NBPF20,PDE4DIP	+,-	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	21940555	C	T	0.00907	RAP1GAP	-	FALSE
chr6	150046603	T	C	0.00730	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr2	74349080	A	G	0.00094		.	FALSE	AluSz	SINE,Alu
chr1	27202959	T	C	0.00653		.	FALSE	AluSq2	SINE,Alu
chr1	205737682	A	G	0.00320	RAB29	-	FALSE	AluSq2	SINE,Alu
chr2	37329307	T	C	0.00201		.	FALSE	AluJr4	SINE,Alu
chr16	74655591	T	G	0.00652	RFWD3	-	FALSE	AluSx	SINE,Alu
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr5	132440285	C	G	0.00322	HSPA4	+	FALSE
chr3	58306686	A	G	0.00970		.	FALSE	AluSz	SINE,Alu
chr19	45406538	C	G	0.00119	TOMM40	+	FALSE
chr1	32697110	A	T	5.19592E-06	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	43748051	A	G	0.00489	C1orf210	-	FALSE	L2c	SINE,Alu
chr1	16932912	T	C	0.00808	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr14	74526976	T	C	1.13179E-06	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	67874696	T	C	0.00839	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr10	47098568	C	T	0.00178	LINC00842	-	FALSE
chr1	11785182	A	G	0.00262		.	FALSE	AluJr	SINE,Alu
chr1	145513098	A	G	0.00514	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	24999468	G	T	0.00075	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	15899630	T	C	0.00082	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr5	159829024	G	C	0.00400	SLU7	-	FALSE
chr2	114513901	C	T	0.00655	SLC35F5	-	FALSE
chr2	220406239	T	G	0.00014	CHPF	-	FALSE	MIRb	SINE,Alu
chr4	57801150	A	T	0.00462	REST	+	FALSE
chr1	28825433	A	G	0.00019	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr12	66546100	A	G	0.00849	TMBIM4	-	FALSE
chr19	53914448	A	G	0.00583	ZNF765	+	TRUE	AluSx	SINE,Alu
chr19	46053667	A	G	0.00995	OPA3	-	FALSE
chr1	10519888	T	C	0.01000		.	FALSE	AluJr	SINE,Alu
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr19	53999034	A	G	0.00282		.	FALSE	AluSq2	SINE,Alu
chr1	28823671	T	C	0.00073	PHACTR4	+	FALSE
chr17	73939212	T	C	0.00376	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr12	44182706	A	G	0.00788	IRAK4	+	FALSE	MSTB-int	SINE,Alu
chr1	144917546	A	G	0.00614	NBPF20,PDE4DIP	+,-	FALSE
chr1	43394612	T	C	0.00154	SLC2A1	-	FALSE
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr6	138413269	A	G	0.00743	PERP	-	FALSE
chr1	33145978	A	T	0.00288	SYNC,RBBP4	+,-	FALSE

RBP	RBM22
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR330KHN
Platform	HiSeq
Pubmed ID	32252787

RBM22 - Target Gene Network