Dataset Overview
RBPMAGOH
Knock-MethodshRNA
RBP FamilyMago_nashi
Biosample NameK562
Tissue TypeHaematopoietic_and_lymphoid_tissue
Biosample TypeCell line
# of Control2
# of Treat2
SpeciesHuman
Data SourceENCODE
Profile IDENCSR849STR
PlatformHiSeq
Pubmed ID32252787

MAGOH - Target Gene Network

up-regulated gene   
down-regulated gene   
Gene Type: # of Top Genes:

Differential Expression Genes responding to KD/KO of MAGOH
Gene Mean Expr. of Control Mean Expr. of KD/KO logFC PValue FDR

Function Analysis of Target Genes of MAGOH


Differential Alternative Splicing
  • Exon Skipping
  • Mutually Exclusive Exons
  • Alternative 5’ splice site
  • Alternative 3’ splice site
  • Intron Retention
RBP LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE pValue △Inc Dataset ID Sashimi plot
RBP LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE pValue △Inc Dataset ID Sashimi plot
RBP LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE pValue △Inc Dataset ID Sashimi plot
RBP LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE pValue △Inc Dataset ID Sashimi plot
RBP LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE pValue △Inc Dataset ID Sashimi plot

Differential Variants in RNA (DVRs)
Chrom Site Ref_allele Alt_allele Pvalue Genename Strand KnownRNAediting RepeatName RepeatFamily
chr1204095687CA5.97770E-05SOX13+FALSE
chr1204520442AG7.81381E-05MDM4+TRUEAluJbSINE,Alu
chr1911256697TC0.00039SPC24-TRUEAluJr4SINE,Alu
chr136770065CT0.00131THRAP3+FALSE(T)nSINE,Alu
chr121940555CT0.00067RAP1GAP-FALSE
chr1773940094TC0.00557ACOX1-TRUEAluJbSINE,Alu
chr177166017GA0.00146.FALSE
chr1574319121AG0.00311PML+TRUEAluSz6SINE,Alu
chr126900708GA0.00349RPS6KA1+FALSE
chr683921257GT0.00876ME1-FALSE
chr127203728AT0.00528.FALSE
chr5134061334AG0.00721SEC24A+FALSE
chr11534614TC5.67045E-11FNDC10-FALSE
chr1244182706AG0.00788IRAK4+FALSEMSTB-intSINE,Alu
chr10117823568TA0.00483GFRA1-FALSE(ATC)nSINE,Alu
chr237331531TC0.00063.FALSEAluJbSINE,Alu
chr624720533CG0.00023.FALSE
chr9115936771CT1.86133E-10FKBP15-FALSE
chr534906661TC9.12853E-06RAD1-TRUEAluJoSINE,Alu
chr116952481AG0.00093CROCCP2-FALSE
chr193617404TG0.00265TMED5-FALSE
chr2171850175GT0.00054TLK1-FALSE
chr127202901TC0.00224.FALSEAluSq2SINE,Alu
chr766421684TG0.00042TMEM248+FALSEAluJrSINE,Alu
chr129631909AG0.00029PTPRU+FALSE
chr3101576175TC0.00246NFKBIZ+FALSE
chr1148252049AC0.00042NBPF8,NBPF14,NBPF9-FALSE
chr1688709698CT0.00330CYBA-FALSE
chr532124827GT0.00047GOLPH3-FALSE
chr642981525GC0.00041MEA1-FALSE
chr1109818158CT4.51493E-05CELSR2+FALSE
chr63022544TC7.02821E-06HTATSF1P2-TRUEAluJrSINE,Alu
chr7129472335TC0.00420UBE2H-FALSE(CA)nSINE,Alu
chr18045340CA0.00217PARK7+FALSE
chr2206988452AT0.00669NDUFS1-FALSE
chr1120166681GA0.00879ZNF697-FALSE
chr642855101AG0.00329RPL7L1+TRUEAluSpSINE,Alu
chr1154317153CT0.00483ATP8B2+FALSE
chr1249745500AG0.00265DNAJC22+TRUEAluSx3SINE,Alu
chr116945027TC0.00819CROCCP2-FALSEL1ME3CzSINE,Alu
chr1936033460CT0.00622GAPDHS,TMEM147-AS1+,-FALSE
chr145280500AG0.00857.FALSEAluSxSINE,Alu
chr1120695049GA0.00129.FALSE
chr121766762CG0.00259NBPF3+FALSE
chr119543353TC0.00091LOC101927895,EMC1+,-FALSEAluJbSINE,Alu
chr417802931TC0.00951DCAF16-TRUEAluSzSINE,Alu
chr1150704633TC1.58455E-05CTSS-TRUEAluJoSINE,Alu
chr2118854088CT0.00543INSIG2+FALSE
chr362189314CT0.00018PTPRG+FALSE
chr133219771GC0.00256KIAA1522+FALSE
chr7129474438CT0.00034UBE2H-FALSE
chr5118174855TC1.06010E-07DTWD2-TRUEAluYSINE,Alu
chr1116235179GT0.00187VANGL1+FALSE
chr131905887AC0.00245SERINC2+FALSE
chr2217366515AG0.00357.FALSEAluSzSINE,Alu
chr3133538762AT0.00804SRPRB+FALSE
chr1675479484TC1.12347E-07TMEM170A-TRUEAluJbSINE,Alu
chr136067821TC1.12344E-05PSMB2-TRUEAluSzSINE,Alu
chr110517314TC0.00286.FALSEAluJrSINE,Alu
chr11650832AG0.00065CDK11B,CDK11A-FALSE
chr1109746601AG0.00024KIAA1324+TRUEAluJbSINE,Alu
chr5112312528TC0.00827DCP2+FALSE
chr624719404CA0.00024.FALSE
chr1713710GC0.00448LOC100288069-FALSEFRAMSINE,Alu
chr1450713578TC0.00260L2HGDH-TRUEAluSxSINE,Alu
chr2172412008CG0.00982CYBRD1+FALSE
chr136031860GT0.00564NCDN+FALSE
chr145671429GA0.00054ZSWIM5-FALSE
chr178414329GA0.00635FUBP1-FALSEA-richSINE,Alu
chr224224134AG9.70565E-06.FALSEAluSpSINE,Alu
chr2118940466AT0.00169CXADR+FALSEAluYSINE,Alu
chr111347150CA0.00016UBIAD1+FALSE
chr110520764TC0.00542DFFA-TRUEAluSc8SINE,Alu
chr1942376675AG0.00085.FALSE
chr8146280802CT0.00492C8orf33+FALSELTR13SINE,Alu
chr1990806GA0.00432AGRN+FALSE
chr328390351AG1.14010E-06AZI2-FALSE
chr1168220489AG0.00525.FALSEAluSz6SINE,Alu
chr6149912307AG0.00026.FALSEAluScSINE,Alu
chr41305799CT0.00271MAEA+FALSE
chr1151955393TC7.77942E-05S100A10-FALSE
chr1214531079AG0.00124PTPN14-FALSE
chr842043493GA0.00045PLAT-FALSEMLT2C1SINE,Alu
chr1109475572AG0.00096GPSM2,CLCC1+,-FALSEAluJoSINE,Alu
chr1765334967TC0.00045PSMD12-TRUEAluSqSINE,Alu
chr1675479377TC0.00639TMEM170A-TRUEAluJbSINE,Alu
chr11344749AG3.37361E-05.FALSEAluSx1SINE,Alu
chr19328243AG0.00616H6PD+TRUEAluJrSINE,Alu
chr340578941AG0.00293ZNF621+TRUEAluJrSINE,Alu
chr1144930940TC6.15272E-05NBPF20,PDE4DIP+,-FALSE
chr119545142AG0.00071LOC101927895,EMC1+,-FALSE
chr11252510TC1.62601E-05CPSF3L-TRUEAluSpSINE,Alu
chr2206987205TC0.00039.FALSEAluSxSINE,Alu
chr1212796592AC0.00801CREBL2+FALSE
chr124288529TC0.00401PNRC2+FALSE
chr1144918957TA0.00484NBPF20,PDE4DIP+,-FALSE
chr4159176109CA0.00042TMEM144+FALSEMIRSINE,Alu
chr152816674TC1.79626E-07CC2D1B-TRUEAluSx1SINE,Alu
chr127731933CA1.77427E-09WASF2-FALSE
chr1178447798TC2.92578E-05RASAL2+FALSE
chr1151554503TC0.00619TUFT1+FALSE
chr312625747GA0.00067RAF1-FALSE
chr1226352498TG0.00636ACBD3-FALSE
chr4140310370TC0.00335NAA15+FALSE(T)nSINE,Alu
chr3197399402TC0.00840RUBCN-FALSE
chr116890671TC0.00097NBPF1-FALSE
chr194423352GA0.00087CHAF1A+FALSEGA-richSINE,Alu
chr132372387AC0.00757PTP4A2-FALSE(CA)nSINE,Alu
chr145452227GC0.00126EIF2B3-FALSE
chr11647814TC7.10450E-06CDK11B,CDK11A-FALSE
chr4144475142TA0.00375SMARCA5+FALSE
chr271412707GA0.00305PAIP2B-FALSEAluJrSINE,Alu
chr6108214773CT0.00265SEC63-FALSE
chr1939669597TC0.00610PAK4+FALSE(TG)nSINE,Alu
chr579923912TC0.00037DHFR-TRUEAluSpSINE,Alu
chr110517276TC0.00283.FALSEAluJrSINE,Alu
chr163207363CT0.00104.FALSE
chr119586294AG0.00048MRTO4+FALSE
chr1919791274AG7.64703E-05ZNF101+TRUEAluSq2SINE,Alu
chr110517276TC0.00604.FALSEAluJrSINE,Alu
chr1063954812AC0.00641RTKN2-FALSE
chr11309885AG0.00010AURKAIP1-FALSE
chr1220323448CT0.00223RAB3GAP2-FALSE
chr3176739580TC4.09936E-06TBL1XR1-FALSE
chr211323108TA0.00100ROCK2-FALSE(TA)nSINE,Alu
chr1101372409TC0.00203SLC30A7+FALSE
chr5121362874AG0.00607SRFBP1+TRUEFRAMSINE,Alu
chr1590820104AG4.84304E-05.FALSEAluYSINE,Alu
chr1145688664AT0.00013NBPF20,NBPF10,RNF115+FALSE
chr1144595886GA0.00242NBPF20+FALSEAluJbSINE,Alu
chr138002068CT0.00962SNIP1-FALSE
chr127481039AG0.00021SLC9A1-FALSE
chr16582868TC0.00368NOL9-TRUEAluSgSINE,Alu
chr1675479467TC0.00160TMEM170A-TRUEAluJbSINE,Alu
chr3169808354GA0.00015PHC3-FALSE
chr296850885TC0.00699STARD7-FALSE
chr1256510709GA0.00047RPL41+FALSE
chr238971644TG0.00021SRSF7-FALSE
chr116932912TC0.00525NBPF1-FALSEL1MC2SINE,Alu
chr128662199AG7.40709E-05MED18+TRUEAluSq2SINE,Alu
chr1522969232GA0.00017CYFIP1+FALSE
chr127180861CT0.00721ZDHHC18+FALSE
chr195362514GT7.06346E-05CNN3-FALSE
chr147844500TG0.00596CMPK1+FALSE
chr193603177TC0.00364MTF2+FALSE
chr140539202GA0.00966PPT1-FALSE
chr261386572CG0.00821C2orf74+FALSEAluSzSINE,Alu
chr1214524178TC0.00265PTPN14-TRUEAluSxSINE,Alu
chr1900717CT0.00661KLHL17+FALSE(TTTA)nSINE,Alu
chr119586532AG0.00188MRTO4+TRUEAluSzSINE,Alu
chr44864940CT0.00247MSX1+FALSE
chr1176835290CT0.00011CAPN5+FALSE
chr1298942820AG0.00568TMPO+TRUEAluScSINE,Alu
chr657034840TG0.00581ZNF451,LOC101927211+,-FALSE
chr7100957852TC1.09184E-06LOC101927746,IFT22+,-FALSEMADE1SINE,Alu
chr345267321CT0.00059TMEM158-FALSE
chr132799435AT0.00515MARCKSL1-FALSE
chr1251325349CG0.00225METTL7A+FALSEAluSq2SINE,Alu
chr19644558AG0.00644.FALSEAluSxSINE,Alu
chr366430374AT0.00275LRIG1-FALSE
chr116890644CT0.00533NBPF1-FALSE
chr1156163906CT0.00130SLC25A44+FALSE
chr7128097846AG0.00015HILPDA+TRUEAluSx1SINE,Alu
chr1145324364CG0.00343NBPF20,NBPF10+FALSE
chr1235612219TA0.00148TBCE,B3GALNT2+,-FALSE
chr247387306GT0.00026CALM2-FALSE
chr631236900GA0.00167.FALSE
chr817503270GC0.00410MTUS1-FALSE
chr11152631CA0.00439SDF4-FALSE
chr122854928AG0.00258ZBTB40+FALSEA-richSINE,Alu
chr1152552285CA0.00400LCE3D-FALSE
chr345960556CT0.00500FYCO1-FALSE
chr237327665TC2.45403E-06.FALSE
chr314986399TC1.19850E-05FGD5-AS1-TRUEAluSq2SINE,Alu
chr237331037TC0.00026.FALSEAluSx1SINE,Alu
chr11419690AG0.00464ATAD3B+TRUEAluYk2SINE,Alu
chr1144932151GT0.00294NBPF20,PDE4DIP+,-FALSE
chr1112170151AG0.00137RAP1A+FALSEL1ME4aSINE,Alu
chr8103841636TC2.19081E-06AZIN1-TRUE
chr123636030AT0.00067HNRNPR-FALSE
chr153366673AG0.00243ECHDC2-FALSEAluJbSINE,Alu
chr1144053567CT0.00963.FALSE
chr5149013587GA0.00102ARHGEF37+FALSEL2dSINE,Alu
chr314986104TC6.10128E-05FGD5-AS1-TRUEFLAM_CSINE,Alu
chr152838798TC0.00069ORC1-TRUEAluJbSINE,Alu
chr5134236206AG0.00065TXNDC15+TRUEAluSqSINE,Alu
chr1204520250AG0.00706MDM4+TRUEAluJbSINE,Alu
chr11650832AG0.00241CDK11B,CDK11A-FALSE
chr115899549TC0.00960AGMAT-TRUEAluSq2SINE,Alu
chr398517013TC1.12976E-12DCBLD2-FALSE
chr1179044110AG0.00176FAM20B+TRUEAluSxSINE,Alu
chr10101992425TC0.00406CWF19L1-TRUEAluSq2SINE,Alu
chr641900765AG0.00256BYSL+FALSE
chr1207943211GA0.00248CD46+FALSEAluSx1SINE,Alu
chr1160965379TC0.00010F11R-TRUEAluScSINE,Alu
chr128261661GA0.00872SMPDL3B+FALSE
chr264327544GT0.00917PELI1-FALSE
chr7100279005CA0.00176GIGYF1-FALSE(A)nSINE,Alu
chr118808465TA0.00957KLHDC7A+FALSE
chr1918476232AG0.00189PGPEP1+TRUEAluJbSINE,Alu
chr1256510559AG0.00137RPL41+FALSE
chr224522807CT0.00079ITSN2-FALSE
chr2170495929TA0.00625.FALSE
chr119633555GA0.00219AKR7A2-FALSE
chr1013320236CT0.00011PHYH-FALSE
chr11252248AG0.00055CPSF3L-FALSEAluSxSINE,Alu
chr1246831356GA0.00616CNST+FALSE
chr11252441TC0.00602CPSF3L-TRUEAluJrSINE,Alu
chr837717121CA0.00087RAB11FIP1-FALSE
chr138411445GA0.00625INPP5B-FALSE
chr358308214GA0.00113.FALSELTR49SINE,Alu
chr556177872AG0.00618MAP3K1+TRUE(CAA)nSINE,Alu
chr1688785189TC0.00636PIEZO1-TRUEAluJrSINE,Alu
chr1022824828AT0.00225PIP4K2A-FALSE
chr126138358CT0.00645SEPN1+FALSE
chr116576290GA0.00104FBXO42-FALSEA-richSINE,Alu
chr128825337AG0.00099PHACTR4+TRUEAluSgSINE,Alu
chr3167727417CT2.31470E-08GOLIM4-FALSE
chr46644273CG0.00000MRFAP1+FALSE
chr765619292AG0.00189CRCP+TRUEAluSz6SINE,Alu
chr128859264TG0.00030RCC1+FALSE
chr128661657AG0.00011MED18+TRUEAluSgSINE,Alu
chr1475202834AG7.36085E-05FCF1+TRUEAluSxSINE,Alu
chr261764922GA0.00268XPO1-FALSE
chr775958147TA0.00917YWHAG-FALSE
chr1184762676TC0.00720FAM129A-TRUEAluSzSINE,Alu
chr161921200AT0.00177NFIA+FALSE
chr178142901TC0.00332ZZZ3-TRUEAluSxSINE,Alu
chr117199259GA0.00217LOC440570+FALSE
chr3176739694TC1.91391E-08TBL1XR1-FALSE
chr179115905TC0.00113IFI44+FALSE
chr1148341981TC0.00226NBPF8,NBPF14,NBPF9-FALSE
chr2152976703TA0.00217STAM2-FALSE
chr1145688983AG0.00101NBPF20,NBPF10,RNF115+TRUEAluSc8SINE,Alu
chr2191067763AT0.00038C2orf88+FALSE
chr1145311900CT0.00286NBPF20,NBPF10+FALSE
chr1252710721GC0.00519KRT83-FALSE
chr1619715518TC0.00502.FALSEAluSgSINE,Alu
chr1541591457AG1.25234E-05OIP5-AS1+TRUEAluSxSINE,Alu
chr830536143TC0.00883GSR-TRUEAluJrSINE,Alu
chr147746678GC0.00374STIL-FALSE
chr116889041CT0.00429NBPF1-FALSE
chr2170497651CT0.00195.FALSE
chr1182360930AG0.00506GLUL-FALSE
chr1150783968TA0.00368ARNT-FALSE
chr3120113403TG2.55249E-11FSTL1-FALSE
chr11252441TC0.00086CPSF3L-TRUEAluJrSINE,Alu
chr13730400TC0.00800CEP104-TRUEAluSx3SINE,Alu
chr5176863519GC0.00567GRK6+FALSE
chr17421034TC0.00998VPS53-TRUEAluSx1SINE,Alu
chr1144873887CT0.00088NBPF20,PDE4DIP+,-FALSE
chr133148251AG0.00389SYNC,RBBP4+,-FALSEAluSgSINE,Alu
chr121793735CG0.00099NBPF3+FALSE
chr2201774244TC0.00332.FALSEAluSzSINE,Alu
chr187213188CA0.00236SH3GLB1+FALSE
chr1156692049AT6.25184E-05ISG20L2-FALSE
chr116889563CA0.00037NBPF1-FALSE
chr164125439AC3.63698E-07PGM1+FALSE
chr1148751869AG0.00011.FALSE
chr2178129405CT0.00295NFE2L2-FALSE(CGG)nSINE,Alu
chr186046472GT0.00409CYR61+FALSE
chr1120286837AG0.00153PHGDH+FALSE
chr417845943CG0.00000NCAPG,LCORL+,-FALSE
chr146075188CA0.00199NASP+FALSEA-richSINE,Alu
chr2120980896TG0.00132TMEM185B-FALSE
chr116932144AC1.90883E-05NBPF1-FALSE
chr128661767AG0.00242MED18+TRUEAluSgSINE,Alu
chr4103718454TA0.00446LOC102723704,UBE2D3+,-FALSE
chr1475202963AG2.20276E-06FCF1+TRUEAluSxSINE,Alu
chr410443059AT0.00187ZNF518B-FALSE
chr116889050AC0.00669NBPF1-FALSE
chr3124948045GC0.00784ZNF148-FALSE
chr410076860GA1.69987E-09WDR1-FALSE
chr2196602326TG0.00503SLC39A10+FALSE
chr255462747TA0.00163RPS27A+FALSE
chr1172003767CA0.00297CLPB-FALSE
chr4160280309GT0.00770RAPGEF2+FALSE(T)nSINE,Alu
chr128661576AG0.00625MED18+TRUEAluSgSINE,Alu
chr1610625049TC1.15092E-05EMP2-TRUEAluSx3SINE,Alu
chr564964314TC0.00208SGTB-TRUEAluScSINE,Alu
chr1269237056AG0.00372MDM2+TRUE
chr2152976703TA0.00126STAM2-FALSE
chr144088547CA0.00927PTPRF+FALSEA-richSINE,Alu
chr11126147697GA0.00237FOXRED1+FALSE
chr1108742632CT0.00933SLC25A24-FALSE
chr237328082TC0.00530.FALSE
chr1911256689TC9.47404E-06SPC24-TRUEAluJr4SINE,Alu

Differential Expression Gene Analysis