RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	9788153	G	A	0.00198	PIK3CD	+	FALSE	AluSx	SINE,Alu
chr1	236721608	C	T	0.00286	HEATR1	-	FALSE
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr14	50792787	A	G	0.00278	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	10520154	T	C	0.00018		.	FALSE	AluSx	SINE,Alu
chr6	32147696	G	A	6.22517E-06		.	FALSE
chr5	37290413	T	C	0.00467		.	FALSE	AluSz	SINE,Alu
chr1	36068369	T	C	0.00012	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	99812464	A	G	1.88485E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr15	83685469	T	C	0.00976	BTBD1	-	FALSE
chr4	119551832	G	A	0.00522	LOC729218	+	FALSE
chr1	77759578	A	G	0.00492	AK5	+	FALSE
chr1	29519665	T	C	0.00680	MECR	-	TRUE	AluJb	SINE,Alu
chr2	37327670	T	C	0.00297		.	FALSE
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr20	18468633	C	A	3.51877E-10	RBBP9	-	FALSE
chr12	93192790	G	T	0.00161	EEA1	-	FALSE
chr3	42592874	T	C	9.28376E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	33148196	A	G	0.00303	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr6	116600810	G	A	0.00028	DSE,TSPYL1	+,-	FALSE
chr3	113528895	A	T	0.00191	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr1	40975260	G	C	0.00902	EXO5	+	FALSE
chr3	47953733	C	A	0.00057	MAP4	-	FALSE
chr17	49042381	T	C	0.00931	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	17345246	A	T	0.00812	SDHB	-	FALSE
chr11	118880839	A	G	0.00922	CCDC84	+	TRUE	AluJb	SINE,Alu
chr1	36068237	T	C	0.00291	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	179325847	A	G	7.26692E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr2	128603087	T	C	0.00036		.	FALSE	AluSp	SINE,Alu
chr1	12082926	A	G	0.00594	MIIP	+	FALSE
chr4	109551185	G	A	0.00344	RPL34	+	FALSE
chr1	6257826	T	C	0.00192	RPL22	-	FALSE
chr1	3545194	C	G	0.00254	TPRG1L	+	FALSE
chr1	53292607	T	A	0.00680	ZYG11B	+	FALSE
chr1	36773405	T	G	0.00546	SH3D21	+	FALSE
chr16	58054477	T	C	0.00180	USB1	+	FALSE
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr1	53711735	G	C	0.00884	LRP8	-	FALSE
chr3	17200677	T	G	0.00371	TBC1D5	-	FALSE
chr1	26226610	C	T	0.00955	STMN1	-	FALSE
chr1	33150598	T	C	4.12722E-05	SYNC,RBBP4	+,-	FALSE
chr1	152187945	C	T	9.69718E-05	HRNR	-	FALSE	(GCCAGA)n	SINE,Alu
chr2	37331037	T	C	0.00538		.	FALSE	AluSx1	SINE,Alu
chr1	27992800	C	A	0.00011	IFI6	-	FALSE	FAM	SINE,Alu
chr19	9672919	T	C	0.00097		.	FALSE	AluSx3	SINE,Alu
chr1	67874697	T	C	0.00022	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr12	9395329	G	A	0.00814	LINC00987	+	FALSE
chr1	52838798	T	C	0.00069	ORC1	-	TRUE	AluJb	SINE,Alu
chr8	30536606	T	C	9.30891E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr17	57279257	A	G	0.00362	PRR11	+	TRUE	AluSq2	SINE,Alu
chr3	52084404	A	T	0.00032	DUSP7	-	FALSE	(A)n	SINE,Alu
chr17	61502463	T	G	0.00370	TANC2	+	FALSE
chr2	25044957	G	A	0.00651	CENPO,ADCY3	+,-	FALSE
chr1	10520296	T	C	0.00765		.	FALSE	AluSx	SINE,Alu
chr21	46353985	A	G	0.00985	LINC01547	-	FALSE	MER5A	SINE,Alu
chr5	114951140	T	G	0.00761	TMED7-TICAM2,LOC101927100,TMED7	+,-	FALSE
chr1	28661653	A	G	9.75782E-05	MED18	+	TRUE	AluSg	SINE,Alu
chr2	208619742	A	G	0.00500	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr10	75009720	T	C	0.00016	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr4	17633798	A	G	0.00053	FAM184B	-	FALSE	AluSz	SINE,Alu
chr6	150047430	T	C	0.00107	NUP43	-	TRUE	AluSc	SINE,Alu
chr7	33060946	A	G	0.00542	NT5C3A	-	FALSE
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr5	52251222	G	T	0.00808		.	FALSE	(GATA)n	SINE,Alu
chr1	10520819	T	C	0.00022	DFFA	-	TRUE	AluSc8	SINE,Alu
chrM	10307	A	C	0.00046		.	FALSE
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr3	98516118	T	A	0.00541	DCBLD2	-	FALSE
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr1	145513017	A	G	0.00142	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr4	107246251	G	T	3.16074E-09	AIMP1	+	FALSE
chr8	98739208	A	G	0.00686	MTDH	+	TRUE	AluSg4	SINE,Alu
chr1	79109352	T	G	0.00818	IFI44L	+	FALSE	LTR26	SINE,Alu
chr2	167168093	C	T	0.00789	SCN9A	-	FALSE
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr3	169492101	C	T	0.00402	MYNN	+	FALSE
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr2	128603114	T	C	0.00143		.	FALSE	AluSp	SINE,Alu
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	40539203	A	T	0.00179	PPT1	-	FALSE
chr1	201845903	A	G	0.00041	IPO9	+	FALSE
chr1	16892913	A	G	0.00441	NBPF1	-	FALSE
chr1	206566948	G	A	0.00228	SRGAP2	+	FALSE
chr2	132278176	T	G	0.00291	LOC150776	+	FALSE
chr19	53914418	A	G	0.00891	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	40219065	C	T	0.00232	PPIE	+	FALSE
chr11	68522907	T	C	0.00828	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	89570148	A	G	0.00084		.	FALSE
chrX	16781687	A	G	0.00298		.	FALSE	AluSx1	SINE,Alu
chr3	194373832	T	C	0.00053	LSG1	-	FALSE
chr5	122359498	A	C	0.00038	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	31732603	A	C	0.00164	SNRNP40	-	FALSE
chr2	37329238	T	C	0.00754		.	FALSE	AluJr4	SINE,Alu
chr1	220231276	T	C	0.00545	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr2	143638998	G	A	0.00496	KYNU	+	FALSE
chr1	114515903	C	T	0.00169	HIPK1	+	FALSE
chr20	54943385	C	A	0.00844	FAM210B	+	FALSE
chr1	67874689	T	C	3.52759E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr1	206566904	T	C	0.00322	SRGAP2	+	FALSE
chr1	569874	C	T	0.00072		.	FALSE
chr3	15113783	T	C	0.00127	RBSN	-	FALSE	AluSz6	SINE,Alu
chr1	1622754	A	G	0.00426	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr12	125627187	C	T	0.00055	AACS	+	FALSE
chr1	40705200	G	A	3.20116E-08	RLF	+	FALSE
chr15	38780594	C	T	0.00135	RASGRP1	-	FALSE
chr1	93308173	T	G	0.00380	FAM69A	-	FALSE
chr3	98518156	T	A	7.17121E-05	DCBLD2	-	FALSE
chr1	1255400	T	C	0.00224	CPSF3L	-	FALSE
chr1	8045341	T	A	0.00750	PARK7	+	FALSE
chr11	75526481	C	A	0.00995	UVRAG	+	FALSE
chr1	32096265	A	G	0.00208	PEF1	-	FALSE
chr1	19543465	T	C	0.00427	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr2	109374952	A	G	0.00031	RANBP2	+	FALSE
chr5	79923430	T	C	0.00817	DHFR	-	TRUE	AluJr	SINE,Alu
chr1	205719141	C	T	0.00021	NUCKS1	-	FALSE
chr1	204524950	A	G	4.72439E-07	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	566933	A	G	3.50078E-05		.	FALSE
chr1	67874731	T	C	0.00817	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	37330620	T	C	0.00216		.	FALSE	AluSq2	SINE,Alu
chr4	17802955	T	C	0.00071	DCAF16	-	FALSE	AluSz	SINE,Alu
chr12	124069108	G	A	0.00635	TMED2	+	FALSE	(GCG)n	SINE,Alu
chr1	46075192	A	C	0.00045	NASP	+	FALSE	A-rich	SINE,Alu
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr6	24720531	C	G	0.00960		.	FALSE	(GGC)n	SINE,Alu
chr1	46078630	A	G	4.65755E-11	NASP	+	FALSE
chr6	31322980	C	T	0.00091		.	FALSE
chr4	113152490	G	A	0.00221		.	FALSE
chr1	10517314	T	C	0.00617		.	FALSE	AluJr	SINE,Alu
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr5	130537933	A	G	0.00084	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	193054576	T	C	0.00068	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr6	13788045	T	C	0.00157	MCUR1	-	TRUE
chr1	53288870	A	G	3.51337E-08	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr5	122165503	A	T	0.00170	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	9161245	T	C	0.00480		.	FALSE	AluSx	SINE,Alu
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr3	46007823	G	T	6.71801E-06	FYCO1	-	FALSE
chr1	85718132	C	A	0.00738	C1orf52	-	FALSE
chr1	16892256	T	C	0.00468	NBPF1	-	FALSE
chr6	42857179	C	A	0.00492	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr19	12742506	A	G	2.74962E-05		.	FALSE	AluSx	SINE,Alu
chr12	57923211	A	C	0.00071	MBD6	+	FALSE	(C)n	SINE,Alu
chr1	93811476	G	C	0.00663		.	FALSE
chr7	138265310	A	G	0.00121	TRIM24	+	FALSE
chr4	190864378	T	G	0.00247	FRG1	+	FALSE	GA-rich	SINE,Alu
chr3	15113736	T	C	0.00641	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	21544601	C	T	0.00196	ECE1	-	FALSE
chr22	50745987	C	G	0.00683	PLXNB2	-	FALSE
chr3	39450156	A	G	0.00985	RPSA	+	FALSE
chr4	1982726	C	T	0.00828	WHSC1	+	FALSE
chr16	15794023	A	G	4.91052E-06	NDE1	+	TRUE	AluSz6	SINE,Alu
chr17	65334867	T	C	1.03096E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr5	40832550	C	T	7.98859E-06	RPL37	-	FALSE
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr5	35058804	A	T	0.00836	PRLR	-	FALSE
chr1	207221096	G	A	0.00452	YOD1	-	FALSE
chr4	108834529	G	T	1.01126E-06	SGMS2,LOC101929595	+,-	FALSE
chr2	85546474	T	C	0.00051	TGOLN2	-	TRUE	AluSc	SINE,Alu
chr2	191799592	A	G	0.00021	GLS	+	TRUE
chr1	20826083	G	A	0.00289	MUL1	-	FALSE
chr5	178986978	C	G	0.00341	RUFY1	+	FALSE
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr3	45267321	C	T	0.00059	TMEM158	-	FALSE
chr1	145289875	T	C	0.00160	NBPF20	+	FALSE	MIR	SINE,Alu
chr7	154796233	A	G	0.00545	PAXIP1-AS1	+	TRUE	AluSx3	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1634860	G	T	0.00103	CDK11B,CDK11A	-	FALSE
chr2	64479079	G	A	0.00452	LOC100507006	+	FALSE
chr2	85772407	T	A	0.00232	GGCX	-	FALSE
chr1	12628188	T	C	3.43513E-08	DHRS3	-	FALSE
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr1	118472402	T	G	0.00342	WDR3	+	FALSE
chr1	109746745	A	G	0.00073	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr3	44772983	C	T	0.00795	ZNF501	+	FALSE
chr1	21793735	C	G	0.00099	NBPF3	+	FALSE
chr3	45636213	C	G	0.00240		.	FALSE
chr2	128064423	C	T	0.00063	MAP3K2	-	FALSE
chr11	64084160	C	T	0.00895	ESRRA,TRMT112	+,-	FALSE
chr3	14186757	C	G	0.00864	XPC	-	FALSE
chr1	201845881	A	C	0.00032	IPO9	+	FALSE
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr1	11159823	T	C	0.00186	EXOSC10,LOC105376736	+,-	FALSE
chr1	10520532	T	C	0.00013		.	FALSE	AluSx1	SINE,Alu
chr2	37327662	T	C	0.00022		.	FALSE
chr1	145281408	C	T	0.00220	NBPF20,NOTCH2NL	+	FALSE
chr1	31905886	C	A	0.00226	SERINC2	+	FALSE
chr1	145512925	A	G	0.00230	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	176792535	T	G	0.00211	LNPK	-	FALSE
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr2	217366866	A	G	0.00247		.	FALSE	AluSz6	SINE,Alu
chr1	201846630	C	A	7.51318E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	28661656	A	G	0.00319	MED18	+	TRUE	AluSg	SINE,Alu
chr1	19585772	G	A	2.66054E-05	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr3	56763316	G	A	0.00830	ARHGEF3	-	FALSE
chr1	205320515	A	G	0.00022	KLHDC8A	-	FALSE
chr1	11814631	A	G	5.11326E-05		.	FALSE
chr1	16889642	T	C	0.00017	NBPF1	-	TRUE
chr1	171501831	A	G	0.00040	PRRC2C	+	FALSE
chr17	53239140	C	T	0.00954	STXBP4	+	FALSE	MIR	SINE,Alu
chr10	17275583	T	C	0.00374	VIM	+	FALSE
chr5	40835321	A	T	0.00526	RPL37	-	FALSE
chr12	48539888	C	A	0.00088	PFKM	+	FALSE
chr5	122165512	C	A	0.00276	SNX2	+	FALSE
chr1	28865502	G	A	0.00073	RCC1	+	FALSE
chr1	16529016	C	T	0.00024	ARHGEF19	-	FALSE
chr2	69746296	C	T	0.00620	AAK1	-	FALSE
chr2	217366626	A	G	0.00057		.	FALSE	AluSz	SINE,Alu
chr2	198416735	T	G	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr1	138356	C	A	0.00199	LOC729737	-	FALSE
chr4	24801315	G	A	9.79732E-09	SOD3	+	FALSE
chr1	94351064	A	T	0.00620	GCLM	-	FALSE
chr1	47903063	G	C	0.00292	FOXD2	+	FALSE
chr1	36067784	T	C	0.00821	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	50150389	A	G	0.00046	RBM5	+	TRUE	AluSx	SINE,Alu
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	982994	T	C	0.00432	AGRN	+	FALSE
chr1	86049362	C	A	0.00140	CYR61	+	FALSE
chr5	133956668	G	A	0.00419	SAR1B	-	FALSE
chr3	196080528	T	C	0.00700	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	23636028	T	A	0.00029	HNRNPR	-	FALSE
chr8	27661036	C	A	0.00339	ESCO2	+	FALSE	A-rich	SINE,Alu
chr1	249139806	G	A	0.00983	ZNF672	+	FALSE
chr1	155217438	A	T	0.00610	FAM189B	-	FALSE
chr1	156564754	A	G	0.00562	GPATCH4	-	FALSE
chr2	86364709	G	T	0.00237	PTCD3	+	FALSE
chr7	75163757	T	C	0.00448	HIP1	-	FALSE	AluSx1	SINE,Alu
chr22	18571345	A	G	0.00113	PEX26	+	TRUE	AluSz	SINE,Alu
chr3	14986137	T	C	0.00132	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	160967855	T	C	0.00548	F11R	-	TRUE	AluSp	SINE,Alu
chr4	17803604	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr4	3219613	A	C	0.00361	HTT	+	FALSE
chr1	33148118	A	G	0.00316	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	115313039	A	G	0.00895	SIKE1	-	FALSE
chr17	36936846	C	T	0.00277	PIP4K2B	-	FALSE
chr4	54244053	G	C	0.00726	FIP1L1	+	FALSE	(CGGAG)n	SINE,Alu
chr1	94351065	A	T	0.00142	GCLM	-	FALSE
chr2	39009427	A	G	1.04745E-05		.	FALSE	AluSx3	SINE,Alu
chr15	72635903	C	T	0.00334	HEXA	-	FALSE
chr8	100890376	G	T	0.00920	COX6C	-	FALSE
chr1	45244419	T	A	0.00027		.	FALSE
chr4	17803578	T	C	0.00712	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	26673076	G	A	0.00465	AIM1L	-	FALSE
chr7	129592510	G	T	0.00165	UBE2H	-	FALSE
chr1	9162348	T	C	0.00023		.	FALSE	AluSx	SINE,Alu
chr1	114940230	T	G	0.00413	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	26143725	A	T	0.00112	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	29519595	T	C	0.00208	MECR	-	TRUE	AluJb	SINE,Alu
chr1	17292223	G	A	0.00351	CROCC	+	FALSE	Penelope1_Vert	SINE,Alu
chr1	16768088	G	A	0.00063	NECAP2	+	FALSE
chr1	160967857	T	C	0.00806	F11R	-	TRUE	AluSp	SINE,Alu
chr3	124732407	T	G	0.00405	HEG1	-	FALSE
chr2	206983491	T	C	0.00505		.	FALSE	AluSx	SINE,Alu
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE
chr17	57656854	C	T	0.00928	DHX40	+	FALSE
chr16	89623607	A	G	0.00915	SPG7	+	FALSE
chr1	26887592	T	C	0.00354	RPS6KA1	+	FALSE
chr6	33385535	A	G	0.00671		.	FALSE
chr1	16939857	C	T	0.00091	NBPF1	-	FALSE
chr1	9329289	C	T	0.00303	H6PD	+	FALSE
chr15	65442592	T	C	8.95444E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr1	25644747	T	C	0.00972	RSRP1,RHD	+,-	FALSE	AluSx1	SINE,Alu
chr16	10623660	T	C	0.00074	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	32799508	A	C	8.53764E-05	MARCKSL1	-	FALSE
chr1	100656265	C	T	0.00318	DBT	-	FALSE
chr3	197682724	T	A	0.00556	IQCG	-	FALSE
chr1	10520378	T	C	0.00743		.	FALSE	AluSx1	SINE,Alu
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr8	1730491	A	G	5.38446E-06	CLN8	+	TRUE	AluSx1	SINE,Alu
chr14	75202312	A	G	3.27721E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr1	27202844	T	C	0.00146		.	FALSE	AluSq2	SINE,Alu
chr2	76672504	A	G	0.00010		.	FALSE	7SK	SINE,Alu
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr6	150047370	T	C	0.00084	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	109801121	C	T	0.00115	CELSR2	+	FALSE
chr10	98278593	A	T	0.00792	TM9SF3	-	FALSE
chr1	19586455	A	G	0.00296	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	109475706	T	C	0.00375	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	44072018	C	T	0.00783	PTPRF	+	FALSE
chr1	28824041	T	A	0.00872	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr3	98515569	C	T	3.10862E-15	DCBLD2	-	FALSE
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr1	144595935	G	A	0.00860	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr2	38522138	G	T	0.00769	ATL2	-	FALSE
chr2	61277798	A	G	0.00077	PEX13	+	TRUE	AluY	SINE,Alu
chr1	36067760	T	C	0.00203	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	109465174	A	C	0.00234	GPSM2	+	FALSE
chr3	123368013	A	G	0.00812	MYLK	-	FALSE
chr14	23794554	G	A	0.00966	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr1	38275802	T	C	2.04657E-06	MTF1	-	FALSE
chr2	32539582	A	G	0.00419		.	FALSE	AluSp	SINE,Alu
chr1	6659505	G	A	0.00405	KLHL21	-	FALSE
chr1	10043504	A	G	0.00213	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr1	45280109	A	G	0.00591		.	FALSE	AluYk3	SINE,Alu
chr2	73460314	C	T	0.00333	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr4	152020781	C	T	0.00925	RPS3A	+	FALSE
chr1	169101307	C	T	0.00405	ATP1B1	+	FALSE
chr14	90509564	C	T	0.00552	TDP1	+	FALSE
chr1	53288870	A	G	0.00122	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr7	6370194	C	T	0.00029	FAM220A	-	FALSE
chr6	42047426	A	G	0.00676	TAF8	+	TRUE	AluSz6	SINE,Alu
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr1	109793319	C	T	0.00027	CELSR2	+	FALSE
chr1	9331101	A	G	0.00072	H6PD	+	FALSE	AluSx	SINE,Alu
chrM	2619	A	T	0.00012	RNR2	+	FALSE	LSU-rRNA_Hsa	SINE,Alu
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	174955746	G	C	0.00768	SFXN1	+	FALSE
chr6	44417136	A	G	0.00644	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	31905888	C	A	0.00667	SERINC2	+	FALSE
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr1	33219771	G	C	0.00256	KIAA1522	+	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr16	75480021	T	C	0.00270	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	1650807	T	C	0.00096	CDK11B,CDK11A	-	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr4	190881971	A	C	0.00183	FRG1	+	FALSE
chr9	7798518	G	C	0.00423	TMEM261	-	FALSE
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chrX	123047295	A	G	9.23037E-05	XIAP	+	FALSE	AluSx	SINE,Alu
chr20	35520935	T	C	0.00120	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr4	2940364	T	C	0.00329	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	57612623	T	C	3.38108E-06	DENND6A,PDE12	+,-	FALSE
chr1	11347150	C	A	0.00380	UBIAD1	+	FALSE
chr5	118174735	T	C	0.00046	DTWD2	-	TRUE	AluY	SINE,Alu
chr2	208619590	A	G	0.00274	CCNYL1,MIR4775	+	TRUE	EutTc1-N2	SINE,Alu
chr2	61154325	T	C	0.00706	REL	+	FALSE	L2b	SINE,Alu
chrX	77083941	T	C	0.00271	MAGT1	-	TRUE	AluSz	SINE,Alu
chr3	37031951	G	A	0.00914	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr1	145293012	G	A	0.00250	NBPF20	+	FALSE
chr3	120114128	A	C	6.21214E-12	FSTL1	-	FALSE
chr3	120115286	T	G	0.00077	FSTL1	-	FALSE
chr3	160154971	T	C	0.00820	TRIM59	-	FALSE	AluJb	SINE,Alu
chr5	64964627	T	C	0.00998	SGTB	-	TRUE	AluSx1	SINE,Alu
chr1	2303108	T	C	5.78895E-05	MORN1	-	FALSE	AluSp	SINE,Alu
chr1	53359745	A	G	0.00129	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr1	67874696	T	C	0.00098	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	16952298	A	C	2.15086E-05	CROCCP2	-	FALSE
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	145293515	A	G	0.00885	NBPF20,NBPF10	+	FALSE
chr1	27250642	A	G	0.00020	NUDC	+	FALSE
chr1	19543353	T	C	0.00077	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE
chr1	145513051	A	G	0.00269	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	36282608	G	T	0.00886	AGO4	+	FALSE
chr3	10302172	G	A	0.00202	TATDN2	+	FALSE
chr1	16920002	G	C	0.00383	NBPF1	-	FALSE
chr4	57326960	A	G	2.00220E-09	PAICS	+	TRUE	AluSx1	SINE,Alu
chr2	86272758	G	A	0.00023	POLR1A	-	FALSE
chr12	21654407	G	A	0.00654	RECQL	-	FALSE
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr15	90375419	T	C	0.00521	C15orf38-AP3S2,AP3S2	-	TRUE	AluJr	SINE,Alu
chr1	32833541	T	C	0.00903	BSDC1	-	TRUE
chr2	36704034	A	G	9.89157E-05	CRIM1	+	FALSE
chr1	33145957	G	T	0.00189	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr1	33148214	A	G	0.00734	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	150446056	G	A	0.00945	RPRD2	+	FALSE	(A)n	SINE,Alu
chr2	133104541	A	G	0.00109		.	FALSE
chr1	161488421	G	T	0.00588	FCGR2A	+	FALSE	AluSz6	SINE,Alu
chr1	40537937	A	C	0.00091	CAP1	+	FALSE	(A)n	SINE,Alu

RBP	SUPV3L1
Knock-Method	shRNA
RBP Family	SUV3_C
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR995RPB
Platform	HiSeq
Pubmed ID	32252787

SUPV3L1 - Target Gene Network