RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr12	56345408	T	G	0.00885	DGKA	+	FALSE
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr1	87573348	C	A	0.00879	HS2ST1	+	FALSE
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chrX	77084038	T	C	0.00265	MAGT1	-	TRUE	AluSz	SINE,Alu
chr5	32404176	C	T	0.00342	ZFR	-	FALSE
chr1	32799439	C	T	0.00239	MARCKSL1	-	FALSE
chr1	95363042	C	G	0.00110	CNN3	-	FALSE
chr1	41972561	T	C	0.00606	HIVEP3	-	FALSE	(T)n	SINE,Alu
chr2	174090321	C	A	0.00273	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr14	63841404	T	A	0.00470	PPP2R5E	-	FALSE	(T)n	SINE,Alu
chr19	1457883	C	G	2.74690E-05	APC2	+	FALSE
chr6	38140505	A	G	0.00109	BTBD9	-	FALSE
chr4	39549797	T	C	0.00196	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr12	102517753	T	C	0.00022	PARPBP	+	FALSE
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	29644328	C	T	0.00014	PTPRU	+	FALSE
chr12	993930	C	T	0.00163	WNK1	+	FALSE
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr17	57279281	A	G	0.00055	PRR11	+	TRUE	AluSq2	SINE,Alu
chr8	146200271	T	C	0.00182	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	53359181	A	G	0.00699	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr2	55462751	T	A	0.00613	RPS27A	+	FALSE
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr12	12618715	T	C	0.00714	BORCS5	+	FALSE
chr16	80636808	C	T	0.00881	CDYL2	-	FALSE
chr9	19376252	A	T	0.00367		.	FALSE
chr17	77807105	C	A	4.63827E-05	CBX4	-	FALSE
chr1	45244413	T	A	0.00750		.	FALSE
chr4	38946824	C	T	0.00250	FAM114A1	+	FALSE
chr2	37329369	T	C	0.00010		.	FALSE	AluJr4	SINE,Alu
chr1	33149443	A	G	6.55200E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	25357680	T	C	0.00861	ETFRF1	+	FALSE
chr1	85484276	C	T	0.00168	MCOLN3	-	FALSE
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr2	113509977	C	T	0.00197	CKAP2L	-	FALSE
chr1	47716039	A	G	0.00863	STIL	-	FALSE
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	19542679	T	C	0.00738	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	24999635	A	G	0.00602	SRRM1	+	FALSE
chr1	86049362	C	A	0.00140	CYR61	+	FALSE
chr1	11979814	G	A	0.00697	KIAA2013	-	FALSE
chr19	9672346	T	C	0.00222		.	FALSE	AluJr	SINE,Alu
chr20	10036845	A	G	0.00110	SNAP25-AS1,ANKEF1	+,-	FALSE
chr1	160990875	T	C	9.42851E-06	F11R	-	FALSE
chr1	145512073	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr12	133298917	A	G	0.00612	PGAM5	+	TRUE	AluSg	SINE,Alu
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr19	18477337	A	G	0.00085	PGPEP1	+	TRUE	AluSx1	SINE,Alu
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	161488017	T	C	5.55712E-05	FCGR2A	+	FALSE	MER57F	SINE,Alu
chr3	194361768	C	T	1.49766E-06	LSG1	-	FALSE	MSTA	SINE,Alu
chr11	69480680	T	C	0.00252	ORAOV1	-	FALSE	AluSx1	SINE,Alu
chr5	177023119	T	A	0.00295	TMED9	+	FALSE
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr1	16254872	C	A	4.87895E-08	SPEN	+	FALSE
chr1	214524633	T	A	0.00017	PTPN14	-	FALSE	Alu	SINE,Alu
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr1	33148706	A	G	0.00087	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	16892918	T	C	0.00128	NBPF1	-	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	155734530	T	C	0.00214	GON4L	-	TRUE
chr1	20977221	A	T	0.00116	PINK1,PINK1-AS	+,-	FALSE
chr1	16203171	C	T	3.13656E-06	SPEN	+	FALSE
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr5	10655842	C	T	0.00024	ANKRD33B	+	FALSE
chr1	27202901	T	C	0.00224		.	FALSE	AluSq2	SINE,Alu
chr1	36602178	A	T	0.00764	TRAPPC3	-	FALSE
chr1	26161104	C	A	0.00030	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	12071680	A	G	0.00985	MFN2	+	FALSE
chr1	45452227	G	C	0.00126	EIF2B3	-	FALSE
chr4	128756579	A	G	0.00501		.	FALSE	AluSx	SINE,Alu
chr1	79110518	A	G	0.00997	IFI44L	+	FALSE
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	113672634	A	G	0.00967		.	FALSE	AluJb	SINE,Alu
chr1	183105534	T	C	0.00125	LAMC1	+	FALSE
chr1	9160996	T	C	0.00023		.	FALSE	AluJb	SINE,Alu
chr17	263367	A	T	2.02495E-05	LOC105371430,C17orf97	+,-	FALSE
chr2	37330576	T	C	0.00055		.	FALSE	AluSq2	SINE,Alu
chr1	45280099	A	G	0.00286		.	FALSE	AluYk3	SINE,Alu
chr5	180236449	G	C	0.00011	MGAT1	-	FALSE
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	16927039	C	T	0.00040	NBPF1	-	FALSE
chr1	119574537	G	A	0.00783	WARS2	-	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr1	93617546	T	C	0.00026	TMED5	-	FALSE
chr1	32953296	A	G	5.26589E-05	ZBTB8B	+	TRUE	AluSz	SINE,Alu
chr1	16890176	A	C	0.00753	NBPF1	-	FALSE
chr6	7310259	A	G	0.00092	SSR1	-	FALSE
chr1	19542401	T	C	0.00010	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	156258283	T	C	0.00071	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	16893686	G	C	0.00138	NBPF1	-	FALSE
chr1	109181317	C	G	0.00166	FAM102B	+	FALSE
chr1	19543249	T	C	1.15194E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16933749	A	G	0.00764	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr7	44842099	A	G	1.82502E-05	PPIA	+	TRUE
chr3	39137788	A	C	0.00830	WDR48	+	FALSE
chr2	130795675	C	T	0.00578	FAR2P1	-	FALSE
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr1	162497663	G	A	0.00335	UHMK1	+	FALSE
chr3	195415529	C	T	0.00819	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr1	6282259	T	C	0.00072	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr1	55207986	T	A	0.00872	MROH7-TTC4,TTC4	+	FALSE
chr6	42854681	A	G	0.00011	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr7	138730361	T	C	0.00316	ZC3HAV1	-	FALSE	L2-1_AMi	SINE,Alu
chr1	28826150	A	G	0.00048	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	195460892	A	G	0.00057		.	FALSE	AluSg	SINE,Alu
chr1	171558516	C	T	4.87297E-05	PRRC2C	+	FALSE
chr1	23240263	G	A	5.22984E-05	EPHB2	+	FALSE
chr17	56049824	T	C	5.91767E-06	VEZF1	-	TRUE
chr4	25279508	G	A	3.42130E-11	PI4K2B	+	FALSE
chr1	11846092	G	T	0.00877	C1orf167,MTHFR	+,-	FALSE
chr7	20177613	T	C	0.00913	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr8	128944717	G	T	0.00091	PVT1	+	FALSE
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr1	9815354	T	G	0.00212	CLSTN1	-	FALSE
chr1	6282318	T	C	0.00418	ICMT	-	TRUE	AluSz	SINE,Alu
chr17	4721376	A	G	0.00177	PLD2	+	FALSE
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr3	45721990	A	G	0.00779	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr14	50053350	T	A	0.00071		.	FALSE	7SLRNA	SINE,Alu
chr1	33150642	A	G	0.00316	SYNC,RBBP4	+,-	FALSE	AluJo	SINE,Alu
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr1	931939	G	A	0.00428		.	FALSE
chr4	57801194	A	T	0.00834	REST	+	FALSE
chr5	149823795	A	T	0.00722	RPS14	-	FALSE
chr1	120612163	C	A	0.00812	NOTCH2	-	FALSE
chr1	10520819	T	C	0.00034	DFFA	-	TRUE	AluSc8	SINE,Alu
chr15	86290940	A	C	1.28576E-05	AKAP13	+	FALSE
chr17	73940918	T	C	6.48265E-05	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr1	70718273	A	T	0.00256		.	FALSE
chr6	42855972	A	G	0.00182	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	205687365	C	T	0.00071	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	225683161	T	G	0.00168	ENAH	-	FALSE	(T)n	SINE,Alu
chr3	195412715	T	C	0.00837	SDHAP2	+	FALSE
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr5	44826677	G	T	0.00941		.	FALSE	(T)n	SINE,Alu
chr1	211921422	T	G	0.00686	LPGAT1	-	FALSE
chr1	21766762	C	G	0.00259	NBPF3	+	FALSE
chr2	37327670	T	C	5.08697E-08		.	FALSE
chr7	6064011	T	A	0.00246	EIF2AK1	-	FALSE
chr9	136209404	G	A	0.00361	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr2	32539582	A	G	0.00419		.	FALSE	AluSp	SINE,Alu
chr5	38478065	T	A	0.00049	LIFR	-	FALSE
chr1	38326728	T	C	0.00079	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	70718278	C	G	0.00663		.	FALSE
chr1	16933110	T	C	0.00821	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr14	100762714	T	C	0.00573	SLC25A29	-	TRUE	AluJo	SINE,Alu
chr1	145513016	A	G	0.00400	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr6	26095468	A	G	0.00980	HFE	+	TRUE	AluY	SINE,Alu
chr10	17275583	T	C	0.00374	VIM	+	FALSE
chr6	160100931	T	C	0.00215	SOD2	-	TRUE	AluSz	SINE,Alu
chr1	204521280	A	G	0.00519	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	179042719	A	G	2.68049E-06	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	183105534	T	C	0.00424	LAMC1	+	FALSE
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr9	115447531	T	C	0.00164	INIP	-	TRUE	AluJb	SINE,Alu
chr1	201845880	T	A	0.00491	IPO9	+	FALSE
chr1	26143697	G	C	0.00778	SEPN1	+	FALSE
chr1	67874859	T	C	0.00214	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	45975358	A	G	0.00339	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr2	32535797	A	G	0.00910		.	FALSE	AluJb	SINE,Alu
chr1	1337738	C	A	4.14710E-05	MRPL20	-	FALSE
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr4	7765043	G	A	0.00071	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	15993514	C	T	0.00802		.	FALSE	AluSx4	SINE,Alu
chr4	2516790	G	T	7.50309E-05	RNF4	+	FALSE
chr5	154194459	C	A	0.00832	LARP1	+	FALSE
chr1	25894468	C	G	0.00357	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	201845882	G	A	0.00890	IPO9	+	FALSE
chr3	196670086	T	G	1.91816E-05	NCBP2-AS2	+	FALSE
chr1	1653093	A	G	0.00768	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	24798498	C	T	0.00131	NIPAL3	+	FALSE
chr4	139088295	C	T	0.00537	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr6	52860743	T	G	1.01575E-05		.	FALSE	7SK	SINE,Alu
chr17	42877749	T	C	0.00287	GJC1	-	TRUE	AluSg	SINE,Alu
chr1	204095426	C	T	0.00481	SOX13	+	FALSE
chr4	103183510	C	T	0.00718	SLC39A8	-	FALSE
chr1	16889566	T	C	0.00305	NBPF1	-	TRUE
chr4	70707440	T	C	0.00059	SULT1E1	-	FALSE	AluJr	SINE,Alu
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chr1	27205214	T	C	0.00048		.	FALSE	AluSc	SINE,Alu
chr19	42375584	A	G	0.00021		.	FALSE	AluSx	SINE,Alu
chr1	9328120	A	G	0.00024	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr1	173836602	G	A	0.00886	GAS5	-	FALSE	AluSx	SINE,Alu
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE
chr2	113334241	A	G	0.00388	POLR1B	+	TRUE
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr2	217366197	T	A	0.00018		.	FALSE
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr1	16927369	C	T	0.00943	NBPF1	-	FALSE
chr3	14986110	T	C	0.00051	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	15112495	T	C	0.00030	RBSN	-	TRUE	AluSq2	SINE,Alu
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr1	10520174	T	C	0.00163		.	FALSE	AluSx	SINE,Alu
chr1	211918115	C	T	0.00979	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr1	36642420	T	C	0.00358	MAP7D1	+	FALSE
chr1	6282401	T	C	0.00026	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	177251328	C	T	9.41230E-05	SPCS3	+	FALSE
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr4	1305799	C	T	0.00730	MAEA	+	FALSE
chr4	2940413	T	C	0.00311	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr4	155457049	T	A	0.00370	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	145329094	G	C	0.00273	NBPF20,NBPF10	+	FALSE
chr16	58054472	T	C	0.00530	USB1	+	FALSE
chr1	100489297	G	C	0.00669	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr8	73958240	G	A	0.00093	TERF1	+	FALSE
chr1	242048674	C	T	0.00093	EXO1	+	FALSE
chr10	65382718	G	A	0.00984	REEP3	+	FALSE	AluSc	SINE,Alu
chr1	931807	G	A	0.00578		.	FALSE
chr2	99812446	A	G	0.00461	MRPL30	+	TRUE	AluSx	SINE,Alu
chr12	98943033	A	G	0.00346	TMPO	+	TRUE	AluSz	SINE,Alu
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	179326588	A	G	0.00563	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	38423235	C	A	0.00040	SF3A3	-	FALSE	AluJo	SINE,Alu
chrX	2824916	T	C	6.31541E-06	ARSD	-	TRUE	AluSx1	SINE,Alu
chr2	37076498	A	C	0.00797	STRN	-	FALSE
chr4	165996811	T	C	6.80024E-05		.	FALSE	AluSg4	SINE,Alu
chr1	94995585	G	A	0.00266	F3	-	FALSE	AluSx	SINE,Alu
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr5	148382005	C	A	8.42472E-06	SH3TC2	-	FALSE
chr1	21100862	C	A	0.00012	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr1	31905887	A	C	4.57629E-05	SERINC2	+	FALSE
chr3	14526625	T	G	0.00414	SLC6A6	+	FALSE
chr1	10517688	T	C	0.00179		.	FALSE	AluSx1	SINE,Alu
chr1	200589540	T	A	0.00151	KIF14	-	FALSE
chr1	114226056	C	A	0.00883	MAGI3	+	FALSE
chr1	117618067	C	T	0.00118	TTF2	+	FALSE
chr2	242122440	C	A	0.00354	PPP1R7	+	FALSE
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	50906945	C	T	0.00178	FAF1	-	FALSE
chr5	35878249	G	A	0.00421	IL7R	+	FALSE
chr4	17802890	T	C	0.00303	DCAF16	-	TRUE	AluSz	SINE,Alu
chr10	60047611	G	A	0.00855	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	148241546	G	A	0.00416	NBPF8	-	FALSE	U1	SINE,Alu
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr2	128603114	T	C	0.00143		.	FALSE	AluSp	SINE,Alu
chr1	226573364	A	G	0.00128	PARP1	-	FALSE
chr4	26432834	G	A	0.00167	RBPJ	+	FALSE	(A)n	SINE,Alu
chr3	195963399	G	A	0.00341		.	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr2	98409998	G	T	0.00261	TMEM131	-	FALSE
chr2	56611540	A	C	0.00198	CCDC85A	+	FALSE
chr19	63721	T	G	0.00602	WASH5P	-	FALSE
chr1	85732582	G	A	0.00371	BCL10	-	FALSE	AluSz6	SINE,Alu
chr12	106460001	G	A	2.23324E-05	NUAK1	-	FALSE
chr16	75479891	T	C	9.48885E-06	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr2	75120158	A	T	0.00222	HK2	+	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr8	37613073	A	C	0.00394	ERLIN2	+	FALSE	(CCCCCAC)n	SINE,Alu
chr5	6633042	C	T	0.00377	NSUN2	-	FALSE
chr8	30536603	T	C	9.61612E-06	GSR	-	TRUE	AluSp	SINE,Alu
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr12	56815652	C	T	1.92663E-05	TIMELESS	-	FALSE
chr1	26131654	G	A	0.00149	SEPN1	+	FALSE
chr14	53242354	T	C	3.85910E-06	GNPNAT1	-	TRUE	AluJo	SINE,Alu
chr2	61277486	A	G	0.00355	PEX13	+	TRUE	AluSx	SINE,Alu
chr15	44751350	C	T	0.00260	CTDSPL2	+	FALSE
chr1	1245100	C	T	0.00656	PUSL1	+	FALSE
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr1	32833541	T	C	0.00903	BSDC1	-	TRUE
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr1	237065326	C	T	0.00376	MTR	+	FALSE
chr1	201846617	A	C	0.00380	IPO9	+	FALSE	(CA)n	SINE,Alu
chr5	150869672	A	T	0.00755	SLC36A1	+	FALSE
chr1	36535560	A	G	0.00059		.	FALSE	AluSx1	SINE,Alu
chr1	20809386	T	G	0.00561	CAMK2N1	-	FALSE
chr1	31905889	A	G	0.00483	SERINC2	+	FALSE
chr1	47903063	G	C	0.00292	FOXD2	+	FALSE
chr2	151326173	A	C	0.00143	RND3	-	FALSE
chr9	33466219	A	C	0.00148	NOL6	-	FALSE
chr16	81744038	T	C	6.34278E-05	CMIP	+	FALSE	(CCGC)n	SINE,Alu
chr1	16892256	T	C	0.00468	NBPF1	-	FALSE
chr7	102006488	A	T	0.00168	LOC100289561,LOC100630923	+	FALSE
chr3	44692564	C	G	0.00182	ZNF35	+	FALSE
chr5	140482871	T	G	0.00650	PCDHB3	+	FALSE
chr2	24225177	A	G	0.00375		.	FALSE	AluSx	SINE,Alu
chr4	17629937	G	A	0.00795		.	FALSE	MER90	SINE,Alu
chr1	214524576	T	C	0.00442	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	179325847	A	G	7.26692E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr3	15112501	T	C	2.98131E-05	RBSN	-	TRUE	AluSq2	SINE,Alu
chr1	247350690	G	C	0.00364		.	FALSE	L1MA7	SINE,Alu
chr2	24225006	A	G	0.00555		.	FALSE	AluSx	SINE,Alu
chrX	123046779	A	G	0.00629	XIAP	+	TRUE	AluSz	SINE,Alu
chr7	5568366	A	G	0.00400	ACTB	-	FALSE
chr1	16450928	T	C	0.00113	EPHA2	-	FALSE
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr9	139417333	G	A	0.00463	NOTCH1	-	FALSE
chr1	19934880	T	C	0.00456	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	27202981	T	C	0.00660		.	FALSE	AluSq2	SINE,Alu
chr1	154554946	C	G	0.00488	ADAR	-	FALSE
chr11	65179818	C	T	0.00799	FRMD8	+	FALSE
chr1	101444791	C	T	0.00268	SLC30A7	+	FALSE
chr1	201860626	A	G	0.00599	SHISA4	+	FALSE
chr6	24780892	A	C	0.00246	GMNN	+	FALSE
chr12	990912	A	C	0.00244	WNK1	+	FALSE
chr12	124146095	A	G	0.00431	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	182358196	C	G	0.00929	GLUL	-	FALSE
chr4	6304286	C	T	0.00054	WFS1	+	FALSE
chr6	47594192	C	T	0.00591	CD2AP	+	FALSE
chr11	94801637	T	C	0.00726	SRSF8	+	FALSE
chr10	51612914	T	C	0.00063	TIMM23B,TIMM23	+,-	FALSE
chr11	8707396	C	A	0.00081	RPL27A	+	FALSE
chr1	33148740	A	G	0.00210	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	40832557	G	T	0.00814	RPL37	-	FALSE
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr1	10517659	T	C	0.00513		.	FALSE	AluSx1	SINE,Alu
chr15	90819409	A	G	5.75884E-05		.	FALSE	AluSx	SINE,Alu
chr1	117530273	A	G	0.00601	PTGFRN	+	FALSE
chr15	41590972	A	G	2.40282E-05	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	10520532	T	C	0.00150		.	FALSE	AluSx1	SINE,Alu
chr1	53288974	A	T	0.00265	ZYG11B	+	FALSE	AluJo	SINE,Alu
chr2	132049924	A	G	0.00338	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr1	38001614	T	C	0.00222	SNIP1	-	TRUE	AluSx	SINE,Alu
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr4	1388115	C	G	0.00682	CRIPAK	+	FALSE	L1MB4	SINE,Alu
chr3	12942851	C	G	0.00013	IQSEC1	-	FALSE
chr3	48787118	T	C	0.00359	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr7	66007124	T	C	0.00158	GS1-124K5.11	-	TRUE	AluJo	SINE,Alu
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr1	24086794	G	T	0.00309	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr7	6442892	C	A	0.00675	RAC1	+	FALSE
chr1	10042988	A	G	4.26240E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr15	63616881	G	A	0.00026	CA12	-	FALSE
chr4	165998149	T	C	0.00057	TMEM192	-	TRUE	AluSx	SINE,Alu
chr13	41635235	C	T	0.00400		.	FALSE
chr4	84525974	T	C	0.00255	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr10	1086801	G	C	0.00421	IDI2-AS1,IDI1	+,-	FALSE
chr7	148700782	G	A	0.00209	PDIA4	-	FALSE
chr11	35017260	T	C	0.00224	PDHX	+	FALSE
chr1	9325676	C	T	9.85088E-06	H6PD	+	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chr1	932005	A	G	0.00110		.	FALSE
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr2	39010088	A	G	0.00192		.	FALSE	AluSp	SINE,Alu
chr4	73957426	G	T	0.00434	ANKRD17	-	FALSE
chr5	49692633	T	G	0.00808	EMB	-	FALSE
chrX	77083941	T	C	0.00271	MAGT1	-	TRUE	AluSz	SINE,Alu
chr6	12120445	A	G	0.00037	HIVEP1	+	FALSE
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr2	72403387	C	A	0.00486	EXOC6B	-	FALSE
chr1	179044181	A	G	0.00660	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr10	75009592	T	C	1.74317E-07	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr16	81745173	C	A	0.00179	CMIP	+	FALSE
chr4	13583889	T	C	2.08207E-10	BOD1L1	-	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr1	1344998	A	G	0.00461		.	FALSE	AluSg	SINE,Alu
chr1	16890286	C	T	3.65680E-06	NBPF1	-	FALSE
chr1	39990456	G	A	0.00749	BMP8A,PPIEL	+,-	FALSE	L2b	SINE,Alu
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	10517485	T	C	0.00260		.	FALSE	AluSx1	SINE,Alu
chr1	47905553	G	A	0.00098	FOXD2	+	FALSE
chr1	114443606	A	G	0.00014	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	1656557	T	C	0.00012	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr17	74560725	T	C	0.00476	SNHG16	+	FALSE	THE1B	SINE,Alu
chr1	1252687	T	C	0.00459	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	62164735	C	T	0.00016	TM2D1	-	FALSE	AluJb	SINE,Alu
chr7	66105198	C	A	0.00456	KCTD7	+	FALSE
chr1	153585584	G	A	0.00011	S100A16	-	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr1	36921372	A	T	0.00259	MRPS15	-	FALSE
chr8	41401571	T	A	0.00240	LOC102723729,GINS4	+,-	FALSE
chr17	29578724	C	T	0.00514	NF1	+	FALSE
chr2	37333924	T	C	0.00298	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	149913733	T	C	0.00143	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	36068275	T	C	0.00048	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	6644273	C	G	0.00000	MRFAP1	+	FALSE
chr1	1252513	T	C	0.00013	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr3	170021210	C	A	0.00015	PRKCI	+	FALSE
chr16	10623545	T	C	0.00142	EMP2	-	TRUE	AluSp	SINE,Alu
chr19	46053667	A	G	0.00995	OPA3	-	FALSE
chr4	57326291	A	G	0.00549	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	38327700	T	C	0.00509	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	19543465	T	C	0.00117	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	29962665	C	T	0.00059	SCRN1	-	FALSE
chr6	18264355	G	A	0.00872	DEK	-	FALSE
chr1	32557486	A	G	0.00525	TMEM39B	+	FALSE
chr1	894375	G	A	0.00052	NOC2L	-	FALSE
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr3	197612334	A	G	0.00070		.	FALSE	AluSp	SINE,Alu
chr1	205577901	G	A	0.00904	ELK4	-	FALSE
chr2	10711446	T	C	0.00014	NOL10	-	FALSE	MSTA	SINE,Alu
chr8	30536544	T	C	0.00122	GSR	-	TRUE	AluSp	SINE,Alu
chr1	144594170	C	T	0.00636	NBPF20	+	FALSE
chr1	95658346	T	A	0.00961	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	144598641	C	T	0.00250	NBPF20	+	FALSE
chr2	198416735	T	G	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr1	3730332	T	C	6.29937E-05	CEP104	-	TRUE	AluSx3	SINE,Alu
chr4	57327092	A	G	0.00091	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	27733305	A	C	0.00374	WASF2	-	FALSE
chr2	17965699	C	T	0.00497	GEN1	+	FALSE	L1M4	SINE,Alu
chr17	65334726	T	C	7.47982E-07	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	11190646	G	A	0.00644	MTOR	-	FALSE
chr19	58357211	A	G	0.00041	ZNF587B	+	TRUE	AluSx3	SINE,Alu
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr5	177576463	A	T	0.00554		.	FALSE
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr3	127790249	A	G	0.00056	RUVBL1,SEC61A1	+,-	FALSE
chr1	85785548	C	T	0.00353	DDAH1	-	FALSE
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr1	16892913	A	G	0.00441	NBPF1	-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr1	145281633	C	A	0.00510	NBPF20,NOTCH2NL	+	FALSE
chr16	71681515	A	G	0.00308	PHLPP2	-	FALSE
chr1	93307477	A	G	6.92611E-06	FAM69A,RPL5	+,-	FALSE
chr1	118165973	C	T	3.23914E-05	FAM46C	+	FALSE
chr16	88789699	A	C	0.00936	PIEZO1	-	FALSE
chr3	44790773	T	C	0.00122	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	31557839	G	T	0.00145	XDH	-	FALSE	AluJr	SINE,Alu
chr1	22109952	G	A	0.00889		.	FALSE
chr1	149577127	G	C	0.00709	LINC00623,LINC00869,LOC103091866	+	FALSE
chr3	57882601	C	T	0.00987	SLMAP	+	FALSE
chr8	11700444	C	G	0.00042	CTSB	-	FALSE	AluSq2	SINE,Alu
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr1	28836912	A	G	3.63020E-05	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr1	46075663	A	G	0.00061	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr1	153720690	G	A	0.00550	INTS3	+	FALSE
chr2	73460314	C	T	0.00333	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr5	125962344	A	G	0.00101	PHAX	+	TRUE	AluSc	SINE,Alu
chr3	30047174	A	T	0.00556	RBMS3	+	FALSE
chr8	143744556	T	C	0.00586	JRK	-	TRUE	AluJr	SINE,Alu
chr1	214531079	A	G	0.00124	PTPN14	-	FALSE
chr2	37327651	T	C	0.00395		.	FALSE
chr2	113334414	A	G	0.00281	POLR1B	+	TRUE	AluSz	SINE,Alu
chr17	3561396	C	T	0.00322	CTNS	+	FALSE
chr4	24801315	G	A	9.79732E-09	SOD3	+	FALSE
chr1	19543456	T	C	3.77297E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	122447574	A	C	0.00224	PARP14	+	FALSE
chr3	197612370	A	G	0.00157		.	FALSE	AluSp	SINE,Alu
chrX	77083617	T	C	3.46806E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	51873951	G	A	1.40484E-05	EPS15	-	FALSE
chr4	39550084	T	C	2.47241E-05	UGDH-AS1,SMIM14	+,-	FALSE	FLAM_C	SINE,Alu
chr1	53289852	A	G	0.00228	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	24223353	A	G	0.00083	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	145273302	A	G	0.00504	NBPF20,NOTCH2NL	+	FALSE
chr1	138356	C	A	0.00481	LOC729737	-	FALSE
chr1	36067760	T	C	1.59237E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	179042590	A	G	0.00152	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr4	6644457	G	A	0.00059	MRFAP1	+	FALSE
chr21	40567667	A	G	0.00658	BRWD1	-	FALSE
chr7	1199790	G	C	0.00049	ZFAND2A	-	FALSE
chr16	10626630	T	C	0.00051	EMP2	-	FALSE	(T)n	SINE,Alu
chr21	40567665	G	A	0.00786	BRWD1	-	FALSE
chr1	148004422	T	A	0.00017	NBPF8	-	FALSE
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	20976211	T	C	0.00833	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	38423184	C	T	4.70100E-06	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	120166681	G	A	0.00879	ZNF697	-	FALSE
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr1	10520487	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr1	10521254	T	C	0.00522	DFFA	-	TRUE	AluY	SINE,Alu
chr2	200792307	G	A	0.00596	C2orf69	+	FALSE
chr3	196670094	G	C	0.00669	NCBP2-AS2	+	FALSE
chr4	57327058	A	G	0.00129	PAICS	+	TRUE	AluSx1	SINE,Alu
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr1	16891340	T	A	0.00440	NBPF1	-	FALSE
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr2	20648140	A	C	6.93182E-06	RHOB	+	FALSE
chr4	7761286	T	C	8.48634E-10	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	16889642	T	C	0.00017	NBPF1	-	TRUE
chr6	42856118	A	G	0.00743	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	117617705	A	G	0.00081	TTF2	+	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr1	38423205	A	G	0.00923	SF3A3	-	FALSE	AluJo	SINE,Alu

RBP	NUP35
Knock-Method	shRNA
RBP Family	Nup35_RRM
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR457WBK
Platform	HiSeq
Pubmed ID	32252787

NUP35 - Target Gene Network