RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	148556726	G	T	0.00023		.	FALSE
chr17	56049829	T	C	5.66836E-08	VEZF1	-	TRUE
chr1	230416399	G	T	5.37638E-05	GALNT2	+	FALSE
chr1	145511962	A	G	0.00187	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	42884086	G	T	0.00040	RIMKLA	+	FALSE
chr1	27182751	C	A	0.00122		.	FALSE
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr1	38423055	C	A	0.00015	SF3A3	-	FALSE
chr1	94995653	A	C	0.00035	F3	-	FALSE	AluSx	SINE,Alu
chr2	32532840	A	G	0.00243		.	FALSE	AluSx1	SINE,Alu
chr4	128995640	G	A	0.00567	LARP1B	+	FALSE
chr5	125961554	A	G	0.00355	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	201774209	T	C	0.00534		.	FALSE	AluSz	SINE,Alu
chr7	38764459	T	C	0.00789	VPS41	-	TRUE	AluSp	SINE,Alu
chr2	85776987	T	A	0.00059	GGCX	-	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	153507108	A	G	2.72071E-06	S100A6	-	FALSE
chr5	174956487	T	C	0.00457	SFXN1	+	FALSE
chr1	146740502	C	G	0.00692	CHD1L	+	FALSE
chr11	67796144	A	T	0.00581	ALDH3B1	+	FALSE	AluSx	SINE,Alu
chr1	44463185	T	G	0.00969	SLC6A9	-	FALSE
chr1	145688664	A	T	0.00679	NBPF20,NBPF10,RNF115	+	FALSE
chr1	185069687	C	T	0.00072	RNF2	+	FALSE
chr12	49745500	A	G	0.00265	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr1	28662157	A	G	0.00159	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	176739580	T	C	4.09936E-06	TBL1XR1	-	FALSE
chr1	6704652	C	T	0.00000	DNAJC11	-	FALSE
chr1	145292925	C	T	0.00817	NBPF20	+	FALSE
chr4	2940347	T	C	0.00113	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr4	170037423	G	T	0.00802	SH3RF1	-	FALSE
chrX	24095066	G	T	0.00603	EIF2S3	+	FALSE
chr1	145512944	A	G	0.00178	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr5	52251222	G	T	0.00808		.	FALSE	(GATA)n	SINE,Alu
chr1	223945582	G	T	0.00304	CAPN2	+	FALSE	AluSx	SINE,Alu
chr5	154194420	G	A	0.00137	LARP1	+	FALSE
chr3	44790781	T	C	0.00289	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr2	37429626	A	G	0.00028	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr19	29703961	A	C	0.00376	UQCRFS1	-	FALSE
chr1	21808159	G	A	0.00011	NBPF3	+	FALSE
chr3	37368755	T	A	9.43816E-08	GOLGA4	+	FALSE
chr1	46806550	C	T	0.00105	NSUN4	+	FALSE
chr15	43767774	G	C	0.00057	TP53BP1	-	FALSE
chr1	20980225	G	T	0.00055	DDOST	-	FALSE
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	45125566	C	T	0.00000	CDCP1	-	FALSE	Charlie8	SINE,Alu
chr1	117617705	A	G	0.00031	TTF2	+	FALSE
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	148751869	A	G	0.00011		.	FALSE
chr3	156258308	T	C	0.00323	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	16933110	T	C	0.00821	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr1	100489996	A	G	0.00069	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr5	31553968	T	C	0.00555	C5orf22	+	FALSE
chr11	119533723	A	G	0.00169	NECTIN1	-	FALSE
chr2	1637648	T	C	9.03854E-11	PXDN	-	FALSE
chr1	65900357	G	T	0.00041	LEPR,LEPROT	+	FALSE
chr1	19543459	T	C	0.00074	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	148753279	G	T	0.00358		.	FALSE
chr3	15114486	T	C	0.00342	RBSN	-	TRUE	AluY	SINE,Alu
chr2	99812864	A	G	0.00810	MRPL30	+	TRUE	AluJb	SINE,Alu
chr16	4810507	G	A	0.00021	ZNF500	-	FALSE
chr4	120979187	T	C	0.00046		.	FALSE	AluSg4	SINE,Alu
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr22	31744347	A	G	0.00113	LINC01521	+	TRUE	AluSp	SINE,Alu
chr1	226333556	C	A	0.00250	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr2	128602462	T	C	0.00298		.	FALSE	AluSq2	SINE,Alu
chr1	10520888	C	T	0.00960	DFFA	-	FALSE
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr2	102508658	T	A	0.00275	MAP4K4	+	FALSE
chr1	160062340	G	A	0.00967	IGSF8	-	FALSE
chr1	205683407	T	A	0.00034	NUCKS1	-	FALSE
chr17	40723650	A	T	0.00250	MLX	+	FALSE
chr8	73958240	G	A	0.00093	TERF1	+	FALSE
chr1	19984461	C	T	0.00112	MINOS1-NBL1,NBL1	+	FALSE
chr12	133297966	A	G	0.00000	PGAM5	+	FALSE	AluJo	SINE,Alu
chr1	120612168	C	T	0.00607	NOTCH2	-	FALSE
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr1	36068295	T	C	0.00058	PSMB2	-	TRUE	AluSc	SINE,Alu
chr10	75008955	T	C	0.00058	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	19543247	T	C	5.35430E-06	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr10	75008846	T	C	0.00135	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	86817074	G	T	9.65311E-06	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr1	26161107	A	T	0.00022	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	168220364	A	G	6.18665E-05		.	FALSE	AluSz6	SINE,Alu
chr1	19199221	C	T	0.00095	ALDH4A1	-	FALSE
chr1	28060574	A	G	0.00206	FAM76A	+	FALSE
chr7	94297294	T	G	0.00494	PEG10	+	FALSE
chr19	39433143	C	T	0.00235	FBXO17	-	FALSE	AluJb	SINE,Alu
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	53290298	A	G	0.00258	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr2	37331019	T	C	0.00033		.	FALSE	AluSx1	SINE,Alu
chr1	118066459	A	G	0.00496	MAN1A2	+	FALSE
chr1	52306087	C	T	0.00022	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	35658260	C	G	0.00477	SFPQ	-	FALSE
chr5	64023977	C	T	0.00340	SREK1IP1	-	FALSE	(TTTTTTT)n	SINE,Alu
chr1	67874689	T	C	0.00896	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	40577761	A	G	0.00701	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	2161135	A	G	0.00028	SKI	+	FALSE
chr1	59124223	G	A	0.00256	MYSM1	-	FALSE	MIR3	SINE,Alu
chr1	16574382	A	C	0.00704	FBXO42	-	FALSE
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr6	74133913	T	C	0.00439		.	FALSE	AluY	SINE,Alu
chr1	158631171	A	C	0.00815	SPTA1	-	FALSE
chr1	900720	A	T	0.00711	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	1683565	G	A	0.00552	NADK	-	FALSE
chr1	22445725	C	G	0.00913	WNT4	-	FALSE
chr21	34728146	A	G	0.00070	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr1	326539	A	G	0.00719		.	FALSE
chr5	149363214	A	G	0.00040	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	40537923	G	A	0.00609	CAP1	+	FALSE	(A)n	SINE,Alu
chr7	6501828	C	A	0.00110	KDELR2	-	FALSE
chr1	65898251	A	T	0.00143	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr4	39550739	T	C	0.00231	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr1	8413129	G	A	0.00040	RERE	-	FALSE
chr1	27250642	A	G	0.00020	NUDC	+	FALSE
chr16	89623619	A	G	0.00275	SPG7	+	FALSE
chr1	6651457	G	A	0.00614	KLHL21	-	FALSE
chr3	100083426	C	T	0.00908	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	86852621	A	G	0.00930	ODF2L	-	FALSE
chr1	145689798	A	G	0.00200	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	19542310	T	C	0.00873	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr1	27202901	T	C	0.00224		.	FALSE	AluSq2	SINE,Alu
chr1	10517659	T	C	0.00513		.	FALSE	AluSx1	SINE,Alu
chr1	179044100	A	G	0.00897	FAM20B	+	TRUE	AluSx	SINE,Alu
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr6	13788222	T	C	0.00490	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	24086794	G	T	0.00028	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	145511929	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	37333924	T	C	0.00298	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chrX	77083617	T	C	3.46806E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr5	10265488	A	G	0.00120	CCT5	+	FALSE
chr1	163116048	G	T	3.38683E-05	RGS5	-	FALSE
chr1	160967817	T	C	0.00478	F11R	-	TRUE	AluSp	SINE,Alu
chr2	105883650	T	G	0.00086	TGFBRAP1	-	FALSE
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr1	1252662	T	C	0.00235	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr1	24796838	A	G	0.00484	NIPAL3	+	FALSE	MER5A	SINE,Alu
chr1	145282600	A	C	0.00391	NBPF20,NOTCH2NL	+	FALSE	MER126	SINE,Alu
chr13	24823699	G	A	0.00472	SPATA13	+	FALSE
chr1	201299882	T	G	0.00145	PKP1	+	FALSE
chr1	52383255	T	C	0.00708	RAB3B	-	FALSE	AluJr	SINE,Alu
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr1	54493197	T	C	0.00064	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr3	101542436	A	G	0.00023	NXPE3	+	TRUE	AluJr	SINE,Alu
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr2	11053740	C	T	0.00402	KCNF1	+	FALSE
chr1	144619903	T	A	0.00712	NBPF20,NBPF9	+	FALSE
chr8	145150065	G	C	0.00585	CYC1	+	FALSE
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr16	10623544	T	C	2.29348E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	99515750	A	G	2.61553E-11	MIR548G	-	FALSE
chr3	107765249	T	C	0.00156	CD47	-	FALSE
chr17	27586605	G	A	0.00053	NUFIP2	-	FALSE
chr6	32121594	T	C	0.00104		.	FALSE
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr17	76117147	G	A	0.00606	TMC6	-	FALSE
chr1	226333558	A	C	0.00052	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	220231963	T	C	0.00343	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	141668922	T	C	0.00937	TFDP2	-	TRUE	AluSz	SINE,Alu
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr1	567489	T	C	0.00119		.	FALSE
chr1	95363042	C	G	0.00110	CNN3	-	FALSE
chr2	155555207	A	C	0.00073	KCNJ3	+	FALSE
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr1	67874859	T	C	0.00027	SERBP1	-	TRUE	AluSx	SINE,Alu
chr2	157440644	G	C	0.00394	GPD2	+	FALSE
chr1	148558269	A	G	0.00538	NBPF15	+	FALSE	AluJb	SINE,Alu
chr3	47628808	A	T	0.00792	SMARCC1	-	FALSE
chr1	184762627	T	C	0.00416	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	40539213	A	G	0.00693	PPT1	-	FALSE
chr1	1653093	A	G	0.00036	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	26143725	A	T	0.00920	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	144598755	G	A	0.00044	NBPF20	+	FALSE
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	176132119	G	C	0.00134	RFWD2	-	FALSE	L3b	SINE,Alu
chrX	77084007	T	C	0.00141	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	10521238	T	C	0.00173	DFFA	-	TRUE	AluY	SINE,Alu
chr1	185014720	A	G	0.00989	RNF2	+	FALSE
chr3	195694448	C	T	0.00289	SDHAP1	-	FALSE
chr1	87328401	A	T	0.00946	SEP15	-	FALSE
chr2	112252464	G	A	2.95640E-06	MIR4435-2HG	-	FALSE
chr2	74332837	G	T	4.72839E-05	TET3	+	FALSE
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr3	179117128	T	C	0.00276	GNB4	-	TRUE	AluSz	SINE,Alu
chr4	6925237	C	G	0.00870	TBC1D14	+	FALSE
chr3	63996230	A	T	0.00309	PSMD6-AS2,PSMD6	+,-	FALSE
chr10	77157784	C	T	0.00027	ZNF503	-	FALSE	(T)n	SINE,Alu
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr2	102484490	G	T	0.00635	MAP4K4	+	FALSE
chr1	33148196	A	G	0.00054	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	33145978	A	T	0.00288	SYNC,RBBP4	+,-	FALSE
chr1	10518616	G	A	0.00379		.	FALSE	AluSx1	SINE,Alu
chr2	37327702	T	C	2.28397E-07		.	FALSE
chr1	145694022	A	G	0.00708	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr1	6582701	T	C	1.54245E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	121133779	C	G	2.29819E-05	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	46075663	A	G	0.00240	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	101442570	A	T	0.00377	SLC30A7	+	FALSE
chr19	13884084	A	G	0.00843	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	19984098	C	G	0.00826	MINOS1-NBL1,NBL1	+	FALSE
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr1	93299394	A	G	0.00655	FAM69A,RPL5	+,-	FALSE
chr1	228334277	C	T	0.00256	GUK1	+	FALSE
chr1	1595006	T	C	0.00156	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr15	51294995	G	A	0.00268	AP4E1	+	FALSE
chr1	70696395	A	T	0.00364	SRSF11	+	FALSE
chr1	246714587	G	A	0.00023	TFB2M	-	FALSE
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	70718280	A	C	0.00946		.	FALSE
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr2	217366534	A	G	0.00733		.	FALSE	AluSz	SINE,Alu
chr1	6283550	A	T	0.00225	ICMT	-	FALSE
chr1	16200163	A	G	1.36684E-05	SPEN	+	FALSE
chr1	118472382	G	T	0.00029	WDR3	+	FALSE
chr4	25279320	G	A	1.66733E-12	PI4K2B	+	FALSE
chr4	155457052	T	A	0.00833	PLRG1	-	FALSE	L2d2	SINE,Alu
chr12	56510706	A	G	0.00053	RPL41	+	FALSE
chr1	10517513	T	C	0.00088		.	FALSE	AluSx1	SINE,Alu
chr1	184762524	T	C	0.00260	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	27481039	A	G	0.00021	SLC9A1	-	FALSE
chr5	37291504	T	C	0.00878		.	FALSE	AluSx3	SINE,Alu
chr14	100762690	T	C	0.00461	SLC25A29	-	TRUE	AluJo	SINE,Alu
chr1	11782984	A	G	0.00107		.	FALSE	AluSx	SINE,Alu
chr7	48146088	A	G	0.00825	UPP1	+	TRUE	AluSq	SINE,Alu
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr1	10520145	T	C	0.00424		.	FALSE	AluSx	SINE,Alu
chr1	118170485	T	C	0.00281	FAM46C	+	FALSE	(TG)n	SINE,Alu
chr1	1344893	A	G	7.94078E-08		.	FALSE	AluSg	SINE,Alu
chr2	197001673	T	C	0.00043	STK17B	-	FALSE
chr12	77438436	T	C	0.00187	E2F7	-	FALSE
chr19	57816349	A	G	8.96695E-06		.	FALSE	AluY	SINE,Alu
chr10	101992298	T	C	0.00409	CWF19L1	-	TRUE	AluSq2	SINE,Alu
chr2	3592602	T	C	0.00232	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr2	70452142	T	G	0.00191	TIA1	-	FALSE
chr1	16892918	T	C	0.00590	NBPF1	-	FALSE
chr8	48889672	A	G	0.00091	MCM4	+	TRUE	AluSx3	SINE,Alu
chr10	60047611	G	A	0.00855	CISD1	+	FALSE	(A)n	SINE,Alu
chr6	150045852	T	C	0.00204	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr7	6063468	G	A	0.00451	EIF2AK1	-	FALSE
chr2	220404381	A	G	0.00268	CHPF	-	FALSE
chr1	38275802	T	C	2.04657E-06	MTF1	-	FALSE
chr5	151041885	G	T	0.00644	SPARC	-	FALSE
chr1	24999468	G	T	0.00075	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr12	21015760	G	A	0.00758	SLCO1B3	+	FALSE
chr1	10518052	T	C	7.90759E-05		.	FALSE	AluJr	SINE,Alu
chr5	53181731	C	T	0.00707	ARL15	-	FALSE
chr12	32532505	G	A	0.00385		.	FALSE
chr1	28261662	A	G	0.01000	SMPDL3B	+	FALSE
chr1	173864944	G	T	2.40127E-05		.	FALSE
chr19	13884096	A	G	0.00049	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	144931330	C	T	0.00295	NBPF20,PDE4DIP	+,-	FALSE
chr1	41326886	C	G	0.00085	CITED4	-	FALSE
chr8	98739208	A	G	0.00686	MTDH	+	TRUE	AluSg4	SINE,Alu
chr1	6283551	T	C	0.00324	ICMT	-	FALSE
chr14	20923558	A	C	0.00373	APEX1	+	FALSE
chr17	60522252	G	A	0.00187	METTL2A	+	FALSE
chr15	90819471	A	G	7.41591E-05		.	FALSE	AluSx	SINE,Alu
chr1	26801736	A	T	0.00578	HMGN2	+	FALSE	(T)n	SINE,Alu
chr4	38946481	A	G	0.00168	FAM114A1	+	FALSE	MER1B	SINE,Alu
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr1	168218543	A	G	0.00547		.	FALSE	AluSz	SINE,Alu
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	145273345	T	C	0.00190	NBPF20,NOTCH2NL	+	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr1	144614842	C	G	0.00015	NBPF20	+	FALSE
chr6	100005419	A	G	2.18273E-06	CCNC	-	FALSE	AluSg	SINE,Alu
chr4	165998039	T	C	0.00199	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	214524576	T	C	0.00060	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	1595048	T	C	0.00646	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	95658344	G	A	0.00100	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr7	6064007	T	A	0.00551	EIF2AK1	-	FALSE
chr1	46828460	C	T	0.00393	NSUN4	+	FALSE
chr2	110842200	C	A	0.00131	MALL	-	FALSE
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr1	10517314	T	C	0.00617		.	FALSE	AluJr	SINE,Alu
chr1	78142901	T	C	0.00332	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	46075724	A	G	1.14407E-05	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	22418284	G	T	0.00024	CDC42	+	FALSE	(T)n	SINE,Alu
chr1	1344998	A	G	5.29904E-05		.	FALSE	AluSg	SINE,Alu
chr7	22981942	G	A	0.00041	FAM126A	-	FALSE
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr5	125961455	A	G	0.00683	PHAX	+	TRUE	AluSz6	SINE,Alu
chr17	4928416	A	G	0.00941	KIF1C	+	TRUE	AluSz	SINE,Alu
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr15	39880358	C	T	0.00028	THBS1	+	FALSE
chr6	42981525	G	C	0.00041	MEA1	-	FALSE
chr3	179042910	A	G	0.00860	ZNF639	+	TRUE	AluSp	SINE,Alu
chr15	38780594	C	T	0.00135	RASGRP1	-	FALSE
chr1	145369706	T	C	0.00186	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	144604425	C	T	0.00299	NBPF20	+	FALSE
chr1	146649854	C	T	0.00033	PDIA3P1	+	FALSE
chr4	190883001	C	G	0.00297	FRG1	+	FALSE
chr1	45244414	T	A	0.00750		.	FALSE
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr3	160219829	C	T	0.00654	KPNA4	-	FALSE	(TA)n	SINE,Alu
chr3	49460407	C	T	0.00080	NICN1	-	FALSE	L2c	SINE,Alu
chr1	148251079	T	C	0.00880	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr1	151095753	A	G	0.00256	GABPB2	+	TRUE	AluSz	SINE,Alu
chr6	29910581	C	A	6.62336E-05		.	FALSE
chrX	152916229	G	A	0.00809	DUSP9	+	FALSE
chr7	127945549	C	T	0.00051	MGC27345	-	FALSE	FLAM_C	SINE,Alu
chr7	148700782	G	A	0.00209	PDIA4	-	FALSE
chr1	181057918	C	G	0.00961	IER5	+	FALSE
chr2	120021785	T	C	0.00751	STEAP3	+	FALSE
chr19	59093997	A	G	0.00047	CENPBD1P1	+	TRUE	AluY	SINE,Alu
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr1	143189486	A	G	0.00122	LOC102723769	-	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr2	86364710	T	C	0.00056	PTCD3	+	FALSE
chr3	44791536	T	C	4.11776E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr2	120980896	T	G	0.00132	TMEM185B	-	FALSE
chr1	36602202	T	C	0.00122	TRAPPC3	-	FALSE
chr5	180682611	C	A	9.20591E-05	CTC-338M12.4	+	FALSE
chr1	3730332	T	C	6.29937E-05	CEP104	-	TRUE	AluSx3	SINE,Alu
chr3	86994021	T	C	0.00705	VGLL3	-	FALSE
chr1	20977599	C	G	0.00489	PINK1,PINK1-AS	+,-	FALSE
chr1	10520331	C	T	0.00043		.	FALSE	AluSx1	SINE,Alu
chr1	23409538	G	A	0.00464	KDM1A	+	FALSE
chr1	47903063	G	C	0.00292	FOXD2	+	FALSE
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	121134169	A	T	0.00660	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr1	6282237	T	C	0.00395	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	117648345	A	G	0.00739		.	FALSE
chr1	10518831	T	C	0.00410		.	FALSE	AluSx1	SINE,Alu
chr1	1650832	A	G	0.00241	CDK11B,CDK11A	-	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	120612163	C	A	0.00566	NOTCH2	-	FALSE
chr12	98943018	A	G	0.00283	TMPO	+	TRUE	AluSz	SINE,Alu
chr8	145159712	A	G	0.00402	MAF1	+	FALSE
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr2	26613949	A	G	0.00669	EPT1	+	FALSE
chr2	10567337	G	C	0.00940	HPCAL1	+	FALSE
chr1	46165408	T	C	0.00106	IPP	-	TRUE	FRAM	SINE,Alu
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr4	42089177	G	A	0.00447	SLC30A9	+	FALSE
chr3	169810385	C	T	0.00621	PHC3	-	FALSE
chr3	44790759	T	C	1.45198E-07	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	55060362	G	A	0.00246	ACOT11	+	FALSE
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr1	1634860	G	T	0.00103	CDK11B,CDK11A	-	FALSE
chr1	45975358	A	G	0.00089	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	9160989	T	C	0.00092		.	FALSE	AluJb	SINE,Alu
chr2	217366674	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr8	56985611	A	T	0.00028	RPS20	-	FALSE
chr1	108113839	T	C	1.78857E-05	VAV3	-	FALSE
chr3	124488267	G	A	3.46260E-06	ITGB5	-	FALSE
chr5	37291617	T	C	0.00022		.	FALSE	AluSx3	SINE,Alu
chr13	45911310	A	T	0.00685	TPT1	-	FALSE
chr1	19234134	A	G	0.00027	IFFO2	-	FALSE
chr1	93827995	C	T	0.00236	DR1	+	FALSE
chr19	57804362	G	A	0.00191	ZNF460	+	FALSE
chr7	2768626	C	T	0.00228	AMZ1,GNA12	+,-	FALSE
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr1	1344749	A	G	3.37361E-05		.	FALSE	AluSx1	SINE,Alu
chr4	165996789	T	C	0.00939		.	FALSE	AluSg4	SINE,Alu
chr1	62628531	A	G	0.00716	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr12	133298254	A	G	1.64181E-10	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	33148216	A	G	0.00824	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	109239334	A	T	0.00035	PRPF38B	+	FALSE
chr1	29095757	G	T	0.00739	YTHDF2	+	FALSE
chr1	118502685	T	A	0.00333	WDR3,SPAG17	+,-	FALSE
chr1	145311900	C	T	0.00286	NBPF20,NBPF10	+	FALSE
chr1	213069783	A	G	0.00600	FLVCR1	+	FALSE
chr5	122359502	A	C	0.00707	PPIC	-	FALSE	(AC)n	SINE,Alu
chr3	123332546	C	G	0.00964	MYLK-AS1,MYLK	+,-	FALSE
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr1	22852880	G	C	0.00247	ZBTB40	+	FALSE
chr1	789232	C	T	0.00335	LINC01128	+	FALSE
chr1	28825337	A	G	0.00838	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr12	9464350	G	C	0.00209	LOC642846	+	FALSE
chr1	8412989	A	G	0.00225	RERE	-	FALSE
chr1	109465168	T	A	0.00246	GPSM2	+	FALSE
chr1	33148736	A	G	4.97736E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr16	2882267	G	C	0.00252	ZG16B	+	FALSE

RBP	DDX59
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR598GKQ
Platform	HiSeq
Pubmed ID	32252787

DDX59 - Target Gene Network