RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	183899832	C	T	1.28780E-06	AP2M1	+	FALSE
chr1	145688983	A	G	0.00072	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	28662254	A	G	0.00505	MED18	+	TRUE	AluSq2	SINE,Alu
chr4	169299528	T	C	0.00745	DDX60L	-	FALSE
chr1	93827991	A	C	0.00533	DR1	+	FALSE
chr1	10519936	T	C	0.00607		.	FALSE	AluJr	SINE,Alu
chr1	148595665	A	G	0.00062	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr19	46214293	C	T	0.00137	FBXO46	-	FALSE
chr4	17804785	T	C	0.00273	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	28836048	G	A	0.00035	SNHG3,RCC1	+	FALSE	AluSx4	SINE,Alu
chr1	44401225	T	C	0.00802	ARTN	+	FALSE
chr1	242012149	C	T	0.00510	EXO1	+	FALSE
chr1	207247475	C	A	0.00680	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr8	95804490	A	G	0.00219	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr2	91955209	G	A	6.38312E-06		.	FALSE
chr2	9629955	G	T	0.00866	ADAM17	-	FALSE
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr3	10290513	C	A	0.00577	TATDN2	+	FALSE
chr6	3266908	G	A	0.00974	PSMG4	+	FALSE
chr1	145512024	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr1	234740975	G	A	0.00106	IRF2BP2	-	FALSE
chr4	140310370	T	C	0.00335	NAA15	+	FALSE	(T)n	SINE,Alu
chrX	123045342	A	G	0.00381	XIAP	+	FALSE	(ATAA)n	SINE,Alu
chr1	70611296	A	T	0.00061	LRRC40	-	FALSE
chr1	6354955	G	A	0.00282	ACOT7	-	FALSE
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr10	17362784	A	G	0.00261	ST8SIA6	-	FALSE
chr5	72801323	C	A	0.00119	BTF3	+	FALSE
chr3	160134195	G	A	0.00631	SMC4	+	FALSE
chr1	155058663	G	A	0.00300	EFNA3	+	FALSE
chr1	16890671	T	C	0.00097	NBPF1	-	FALSE
chr11	65404866	T	G	0.00664	PCNX3	+	FALSE	(T)n	SINE,Alu
chr1	33148621	A	G	0.00754	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr6	42857179	C	A	0.00492	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr5	53841240	A	G	0.00416	SNX18	+	FALSE
chr1	180247477	C	T	0.00060		.	FALSE
chr1	11979809	A	C	0.00525	KIAA2013	-	FALSE
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr16	3207362	A	T	1.09222E-05		.	FALSE
chr1	45976112	A	G	1.14998E-06	MMACHC	+	TRUE	AluJr	SINE,Alu
chr4	164245873	T	A	0.00014	NPY1R	-	FALSE
chr1	148251009	T	C	0.00065	NBPF8,NBPF14,NBPF9	-	TRUE
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chrX	2824317	T	C	0.00047	ARSD	-	TRUE	AluJb	SINE,Alu
chr1	148753279	G	T	0.00358		.	FALSE
chr12	72096318	A	G	0.00547	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr3	33907945	A	G	3.34896E-07	PDCD6IP	+	FALSE
chr1	33324136	T	C	0.00739	S100PBP	+	FALSE
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr3	172117459	C	A	0.00791	FNDC3B	+	FALSE
chr1	32697109	A	G	0.00015	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	23408939	T	A	1.04314E-06	KDM1A	+	FALSE
chr1	9163334	T	C	0.00108		.	FALSE	AluSp	SINE,Alu
chr6	158093827	C	T	0.00201	ZDHHC14	+	FALSE
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	277003	A	G	1.77913E-11	ACP1	+	FALSE
chr1	113455441	C	A	0.00047	SLC16A1	-	FALSE	(A)n	SINE,Alu
chr1	33148736	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	46075777	A	G	0.00268	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	124948049	T	C	0.00069	ZNF148	-	TRUE
chr5	125961649	A	G	3.29658E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	17199309	G	A	0.00398	LOC440570	+	FALSE
chr19	18477337	A	G	0.00085	PGPEP1	+	TRUE	AluSx1	SINE,Alu
chr6	31595882	C	A	0.00450		.	FALSE
chr2	55462747	T	A	0.00163	RPS27A	+	FALSE
chr5	40835311	A	T	0.00632	RPL37	-	FALSE
chr5	40829780	T	C	0.00753		.	FALSE	LTR66	SINE,Alu
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr1	173834225	T	C	0.00105	GAS5	-	FALSE	AluSz	SINE,Alu
chr4	47514685	C	T	2.65771E-05	ATP10D	+	FALSE
chr1	180854773	A	G	0.00800	XPR1	+	FALSE
chr1	246829616	T	C	0.00139	CNST	+	FALSE
chr1	10518797	T	C	0.00510		.	FALSE	AluSx1	SINE,Alu
chr2	55516911	A	G	0.00719	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr19	11257673	T	C	0.00155	SPC24	-	TRUE	AluSp	SINE,Alu
chrX	54587218	A	G	0.00014	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr15	82336939	G	A	2.47536E-05	MEX3B	-	FALSE
chr3	15114759	G	A	1.99109E-05	RBSN	-	FALSE
chr1	16933327	C	T	6.62916E-05	NBPF1	-	FALSE
chr17	60522243	C	G	0.00327	METTL2A	+	FALSE
chr2	37429738	A	G	0.00203	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr4	83406548	A	T	0.00020	TMEM150C	-	FALSE
chr19	42375554	A	G	0.00458		.	FALSE	AluSx	SINE,Alu
chr1	10519148	T	C	0.00214		.	FALSE	AluSx3	SINE,Alu
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr6	31657413	T	C	0.00066		.	FALSE
chr1	2323041	T	C	0.00970	MORN1	-	FALSE
chr3	195243006	C	A	7.17300E-06	PPP1R2	-	FALSE
chr13	32973012	A	C	0.00231	BRCA2	+	FALSE
chr1	145512930	A	G	5.47366E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	25890189	A	G	0.00961	LDLRAP1	+	FALSE
chr1	44818528	T	G	0.00486	ERI3	-	FALSE
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr1	35650014	C	A	0.00012	SFPQ	-	FALSE
chr1	10520683	T	C	0.00058	DFFA	-	TRUE	AluSc8	SINE,Alu
chr2	85776765	T	C	0.00426	GGCX	-	TRUE	AluSz6	SINE,Alu
chr3	63996227	G	T	0.00114	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	44171144	T	A	0.00108	KDM4A-AS1,KDM4A	+,-	FALSE
chr4	25236017	T	C	0.00291	PI4K2B	+	FALSE
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr1	213069114	C	A	0.00681	FLVCR1	+	FALSE
chr1	53291434	A	G	0.00318	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	28861636	G	A	0.00754	RCC1	+	FALSE	(GCATGT)n	SINE,Alu
chr1	1169728	G	T	0.00745	B3GALT6	+	FALSE
chr2	37334146	T	C	0.00039	EIF2AK2	-	TRUE	AluSz	SINE,Alu
chr1	1344998	A	G	0.00461		.	FALSE	AluSg	SINE,Alu
chr4	56295161	T	A	0.00075	CLOCK	-	FALSE	(T)n	SINE,Alu
chr2	120021785	T	C	0.00751	STEAP3	+	FALSE
chr1	10517486	T	C	0.00626		.	FALSE	AluSx1	SINE,Alu
chr1	144932200	G	T	0.00492	NBPF20,PDE4DIP	+,-	FALSE
chr1	186946912	G	A	0.00414	PLA2G4A	+	FALSE
chr1	10043053	A	G	0.00318	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	10519064	T	C	0.00515		.	FALSE	AluSx3	SINE,Alu
chr6	160101723	T	C	0.00234	SOD2	-	TRUE	AluSz	SINE,Alu
chr5	1317949	C	T	0.00173	CLPTM1L	-	FALSE
chr1	19934839	A	G	0.00052	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr10	124815149	C	G	0.00993	ACADSB	+	FALSE	THE1A-int	SINE,Alu
chr16	29454297	T	C	0.00104	SMG1P6,BOLA2-SMG1P6	-	TRUE	Tigger4a	SINE,Alu
chr1	16945570	A	G	0.00251	CROCCP2	-	FALSE
chr1	28835934	A	G	3.31538E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr3	44791062	T	C	0.00035	KIAA1143	-	FALSE
chr2	109401284	G	C	0.00059	RANBP2	+	FALSE
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr1	206635247	C	T	0.00291	SRGAP2	+	FALSE	(AC)n	SINE,Alu
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr7	6064012	T	C	0.00240	EIF2AK1	-	FALSE
chr4	88059663	G	T	0.00165	AFF1	+	FALSE	(GT)n	SINE,Alu
chr1	19543465	T	C	0.00638	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	95660026	G	T	0.00129	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	26603883	G	A	0.00088	CEP85	+	FALSE
chr1	145513113	A	G	0.00505	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chrX	3526658	A	T	0.00152	PRKX	-	FALSE	(AC)n	SINE,Alu
chr2	20401854	A	T	2.80783E-05	SDC1	-	FALSE
chr1	28825486	A	G	0.00049	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr15	42860120	A	G	0.00045	HAUS2	+	TRUE	AluSg	SINE,Alu
chr1	160231113	C	T	0.00204	DCAF8	-	FALSE
chr1	9643106	A	G	0.00088		.	FALSE	AluSx	SINE,Alu
chr1	1417974	C	T	0.00677	ATAD3B	+	FALSE
chr1	6583066	T	C	0.00209	NOL9	-	TRUE	AluSx4	SINE,Alu
chr9	36216895	T	C	0.00130	GNE	-	TRUE	AluY	SINE,Alu
chr19	45406538	C	G	0.00119	TOMM40	+	FALSE
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	213244381	G	A	0.00345	RPS6KC1	+	FALSE
chr3	128215735	G	A	0.00734	GATA2-AS1	+	FALSE
chr14	23795204	G	T	0.00938	BCL2L2-PABPN1,PABPN1	+	FALSE
chr17	49042395	T	C	0.00326	SPAG9	-	TRUE	AluJb	SINE,Alu
chr6	42855954	A	G	0.00190	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr6	32121594	T	C	0.00104		.	FALSE
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr2	70452141	C	A	0.00191	TIA1	-	FALSE
chr2	208466270	A	G	0.00713	CREB1,METTL21A	+,-	FALSE
chr1	205581853	C	T	0.00171	ELK4	-	FALSE
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr5	74072638	G	A	0.00431	NSA2	+	FALSE
chr1	155582104	T	A	0.00099	MSTO1	+	FALSE
chr1	9642830	T	A	0.00059	SLC25A33	+	FALSE
chr1	16912014	A	C	0.00199	NBPF1	-	FALSE
chr1	19543783	T	C	0.00822	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	79447807	G	C	0.00339	FRAS1	+	FALSE
chr4	39552148	T	C	0.00011	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr5	180663940	A	G	0.00331	RACK1	-	FALSE
chr2	20401859	A	T	0.00930	SDC1	-	FALSE	(A)n	SINE,Alu
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr1	6683561	C	G	0.00732	PHF13	+	FALSE
chr17	57279264	A	G	0.00793	PRR11	+	TRUE	AluSq2	SINE,Alu
chr4	17802920	T	C	0.00805	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	33086754	T	C	0.00065		.	FALSE	AluY	SINE,Alu
chr1	177976440	C	T	0.00148	LOC730102	-	FALSE
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	219100202	C	T	0.00027	ARPC2	+	FALSE	AluJr	SINE,Alu
chr5	147793406	A	G	0.00323	FBXO38	+	FALSE
chr20	35409827	T	C	0.00267	SOGA1	-	TRUE	AluSx	SINE,Alu
chr8	71550832	T	C	0.00725	LACTB2-AS1,LACTB2	+,-	FALSE
chr2	220404381	A	G	0.00268	CHPF	-	FALSE
chr3	45125417	G	A	0.00024	CDCP1	-	FALSE	AluJb	SINE,Alu
chr2	37328027	T	C	0.00026		.	FALSE
chr17	56049824	T	C	5.91767E-06	VEZF1	-	TRUE
chr2	204301754	C	G	0.00012	RAPH1	-	FALSE
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr2	71411975	A	C	0.00463	PAIP2B	-	FALSE
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr1	1650801	T	C	0.00359	CDK11B,CDK11A	-	FALSE
chr1	15015	G	C	0.00809	WASH7P	-	FALSE
chr2	72403402	C	A	0.00108	EXOC6B	-	FALSE	GA-rich	SINE,Alu
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chr1	145511929	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	10421878	A	G	7.26627E-05	KIF1B	+	FALSE
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr12	3150853	C	G	0.00158		.	FALSE	(CCTCCCTG)n	SINE,Alu
chr3	196558949	A	G	6.63189E-10	PAK2	+	FALSE
chr5	128430757	T	C	0.00338	ISOC1	+	FALSE
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	36067925	T	C	1.59250E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr16	70695982	T	C	0.00926	MTSS1L	-	FALSE
chr2	91843471	C	T	0.00105	LOC654342	-	FALSE
chr3	15113657	T	C	2.06253E-05	RBSN	-	TRUE	AluSz6	SINE,Alu
chr8	117858600	T	A	0.00015	RAD21	-	FALSE
chr10	60157509	T	G	0.00296	TFAM	+	FALSE
chr22	18572597	A	G	0.00322	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	118502684	G	A	0.00682	WDR3,SPAG17	+,-	FALSE
chr1	36068184	T	C	0.00150	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	102119322	T	C	0.00834	POLR2J	-	FALSE
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr1	22445725	C	G	0.00913	WNT4	-	FALSE
chr1	77759578	A	G	0.00283	AK5	+	FALSE
chr1	10518733	T	C	0.00541		.	FALSE	AluSx1	SINE,Alu
chr2	129024188	T	G	0.00051	HS6ST1	-	FALSE
chr1	155106227	A	T	0.00137	EFNA1	+	FALSE
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr1	153920564	A	G	0.00057	CRTC2	-	FALSE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr6	31378510	G	A	0.00104		.	FALSE
chr1	16889503	T	C	0.00130	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr5	14397238	T	C	0.00552	TRIO	+	FALSE
chr1	22855441	C	T	0.00884	ZBTB40	+	FALSE
chr1	85785552	T	C	0.00334	DDAH1	-	FALSE
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	20945055	C	T	0.00542	CDA	+	FALSE
chr3	191100561	C	A	2.52744E-07	CCDC50	+	FALSE
chr3	120114914	G	A	1.07649E-06	FSTL1	-	FALSE
chr1	46076543	A	G	0.00156	NASP	+	TRUE	AluSx	SINE,Alu
chr1	36068295	T	C	0.00058	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr5	40832553	A	T	9.00390E-07	RPL37	-	FALSE
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	169101269	T	G	0.00307	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr3	15113733	T	C	0.00228	RBSN	-	TRUE	AluSz6	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	26144434	G	T	0.00945	SEPN1	+	FALSE
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr1	9328086	G	A	0.00017	H6PD	+	FALSE	AluJr	SINE,Alu
chr6	13788215	T	C	0.00546	MCUR1	-	TRUE	AluSx	SINE,Alu
chr7	158590740	A	T	0.00211	ESYT2	-	FALSE
chr1	19943823	C	A	0.00752	MINOS1,MINOS1-NBL1	+	FALSE
chr3	12628920	G	C	0.00036	RAF1	-	FALSE
chr1	45244419	T	A	0.00027		.	FALSE
chr17	65334967	T	C	0.00045	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	145303971	A	G	0.00060	NBPF20,NBPF10	+	FALSE
chr1	225707042	T	C	4.11654E-05	ENAH	-	FALSE
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr3	17200672	C	A	0.00665	TBC1D5	-	FALSE
chr12	53435627	A	G	0.00133	EIF4B	+	FALSE
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr2	217366674	A	G	0.00889		.	FALSE	AluSz	SINE,Alu
chr1	78414285	T	A	0.00179	FUBP1	-	FALSE
chr16	9204015	C	T	0.00325	C16orf72	+	FALSE
chr5	177577353	C	A	0.00121	NHP2	-	FALSE
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1252687	T	C	0.00459	CPSF3L	-	TRUE	AluSp	SINE,Alu
chrX	102613351	A	G	0.00969	TCEAL9	+	FALSE	L1ME4a	SINE,Alu
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr1	21810575	T	C	0.00827	NBPF3	+	FALSE
chr19	46053370	T	C	0.00045	OPA3	-	TRUE	AluSx1	SINE,Alu
chr1	1337735	T	G	3.46713E-05	MRPL20	-	FALSE
chr1	165728775	C	T	5.75449E-06	TMCO1	-	FALSE
chr1	10044137	A	G	2.83529E-05	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr1	31905889	A	G	0.00483	SERINC2	+	FALSE
chr20	25428547	A	G	7.92315E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	236721608	C	T	0.00286	HEATR1	-	FALSE
chr1	40219280	T	C	0.00025	PPIE	+	FALSE
chr1	32158374	T	C	0.00134	COL16A1	-	FALSE
chr1	6283273	T	C	0.00109	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	128952015	A	G	0.00908	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr11	125452298	A	G	0.00583	EI24,STT3A-AS1	+,-	FALSE
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr2	86251151	T	C	0.00882		.	FALSE	AluSx	SINE,Alu
chr1	204521576	A	G	0.00021	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr1	27992825	G	A	0.00192	IFI6	-	FALSE
chr1	45280426	A	G	0.00802		.	FALSE	AluSx	SINE,Alu
chr5	52397314	C	T	0.00249	MOCS2	-	FALSE
chr11	118915753	T	C	8.93388E-07	HYOU1	-	FALSE
chr1	114306372	A	G	0.00443	RSBN1	-	FALSE
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr1	10517313	T	C	0.00742		.	FALSE	AluJr	SINE,Alu
chr1	36534784	A	G	0.00369		.	FALSE	AluJo	SINE,Alu
chr1	28826085	A	G	0.00281	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	65898873	G	C	0.00530	LEPR,LEPROT	+	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr13	20224387	A	G	0.00959	MPHOSPH8	+	FALSE
chr9	132268259	A	G	0.00032	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	145290874	C	T	0.00380	NBPF20	+	FALSE
chr1	20978324	T	G	0.00153	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr7	100957851	T	C	0.00028	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr12	124146100	A	G	4.66106E-08	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr8	12884103	T	C	0.00033	KIAA1456	+	FALSE	MIR	SINE,Alu
chr19	21302045	A	G	0.00020	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr4	84525973	C	G	0.00148	GPAT3	+	FALSE
chr19	49468569	G	T	0.00266	FTL	+	FALSE
chr1	46077268	A	G	0.00484	NASP	+	TRUE	AluSc8	SINE,Alu
chr21	34731077	A	G	0.00926	IFNAR1	+	TRUE	AluJr	SINE,Alu
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	33145957	G	T	0.00189	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr9	137330709	G	T	6.64722E-05	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr1	38327457	T	C	0.00305	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr2	174090320	T	A	0.00174	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	62628606	A	G	0.00027	PATJ	+	TRUE	AluSg4	SINE,Alu
chr1	6583138	T	C	0.00010	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr16	10625108	T	C	7.88488E-10	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	15993013	G	A	1.16652E-10		.	FALSE
chr2	232328545	C	T	0.00581	NCL	-	FALSE
chr5	93018883	A	T	0.00393	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr11	16771525	T	C	0.00014	C11orf58	+	FALSE
chr15	32820819	T	G	0.00718	WHAMMP1	-	FALSE
chr4	39552646	T	C	0.00555	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	28564612	C	A	0.00714	ATPIF1	+	FALSE
chr1	94660609	C	T	0.00383	ARHGAP29	-	FALSE
chr1	65898263	A	G	0.00767	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr7	129963777	T	G	0.00874	CPA4	+	FALSE	(TG)n	SINE,Alu
chr1	326499	A	G	0.00583		.	FALSE
chr1	28865502	G	A	0.00531	RCC1	+	FALSE
chr1	220232143	T	C	7.81076E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	136542427	T	A	0.00075	UBXN4	+	FALSE	L1ME4b	SINE,Alu
chr1	144930940	T	C	6.15272E-05	NBPF20,PDE4DIP	+,-	FALSE
chr2	198572082	T	C	0.00093	MARS2	+	FALSE
chr1	93307479	C	A	0.00085	FAM69A,RPL5	+,-	FALSE
chr1	9162933	C	T	0.00088		.	FALSE
chr8	37717121	C	A	0.00087	RAB11FIP1	-	FALSE
chr3	181431106	C	G	0.00542	SOX2-OT,SOX2	+	FALSE
chr2	206986926	T	C	0.00478		.	FALSE	AluJr	SINE,Alu
chr4	39551166	T	C	0.00309	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	36535560	A	G	0.00059		.	FALSE	AluSx1	SINE,Alu
chr2	171850175	G	T	0.00054	TLK1	-	FALSE
chr1	175126524	T	C	0.00901	KIAA0040	-	FALSE
chr4	2940243	T	A	0.00028	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	36789546	A	G	0.00623	EVA1B	-	FALSE	MIRb	SINE,Alu
chr12	98942695	A	G	0.00204	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	37328087	T	C	0.00313		.	FALSE
chr3	124688639	C	A	0.00165	HEG1	-	FALSE
chr7	27237453	C	T	0.00421	HOXA13	-	FALSE
chr1	19542631	T	C	0.00176	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	47133835	C	A	1.43471E-05	ATPAF1	-	FALSE
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	31732601	A	T	0.00479	SNRNP40	-	FALSE
chr7	2473747	A	G	0.00872	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr4	2841893	A	G	0.00974	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr3	196557274	C	T	0.00285	PAK2	+	FALSE
chr4	39552022	T	C	0.00015	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr6	29912348	A	G	0.00429		.	FALSE
chr1	28825337	A	G	0.00099	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr11	8707395	C	A	9.51875E-07	RPL27A	+	FALSE
chr2	47604176	C	T	0.00328	EPCAM	+	FALSE
chr1	109239943	C	T	0.00722	PRPF38B	+	FALSE
chr1	25894462	A	G	0.00101	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	8045343	C	A	0.00162		.	FALSE
chr1	37949806	G	A	2.03247E-05	ZC3H12A	+	FALSE
chr10	61548852	G	A	0.00693	CCDC6	-	FALSE
chr1	569874	C	T	0.00076		.	FALSE
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr12	125511942	A	G	0.00015	THRIL	-	FALSE	AluSx1	SINE,Alu
chr7	79848337	G	A	0.00037	GNAI1	+	FALSE
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	16890500	G	A	0.00030	NBPF1	-	FALSE
chr1	205738302	G	A	0.00247	RAB29	-	FALSE
chr1	11150682	C	T	3.65592E-05	EXOSC10	-	FALSE
chr4	57326879	A	G	0.00198	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	161488017	T	C	5.55712E-05	FCGR2A	+	FALSE	MER57F	SINE,Alu
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr1	110596904	A	G	0.00364	STRIP1	+	FALSE
chr5	64016339	C	T	6.96791E-06	SREK1IP1	-	FALSE
chr2	188330323	T	G	0.00162	TFPI	-	FALSE	L2	SINE,Alu
chr1	45976723	T	C	0.00239	MMACHC,PRDX1	+,-	FALSE
chr1	151372040	A	T	0.00825		.	FALSE
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr21	34728146	A	G	0.00070	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr19	2426238	T	G	0.00129	TIMM13,TMPRSS9	+,-	FALSE
chr2	37330146	C	G	2.68632E-05		.	FALSE
chr15	23283141	C	A	0.00056	HERC2P2	-	FALSE
chr1	28661656	A	G	0.00026	MED18	+	TRUE	AluSg	SINE,Alu
chr1	121133770	A	G	2.59811E-05	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr7	20178460	T	C	6.50978E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	145376020	G	A	0.00478	NBPF20,NBPF10	+	FALSE
chr1	203821865	C	T	0.00222	ZC3H11A	+	FALSE
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr19	19745479	C	T	0.00175	GMIP	-	FALSE
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	177576463	A	T	0.00554		.	FALSE
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr1	52498139	A	G	0.00193	TXNDC12,KTI12	-	FALSE
chr15	93568295	G	A	0.00225	CHD2	+	FALSE
chr2	24225554	A	G	0.00419		.	FALSE	AluSq2	SINE,Alu
chr1	160967817	T	C	0.00478	F11R	-	TRUE	AluSp	SINE,Alu
chr1	16945227	G	T	0.00090	CROCCP2	-	FALSE
chr2	37076594	T	C	0.00198	STRN	-	FALSE
chr1	19543457	T	C	0.00101	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	16893686	G	C	0.00386	NBPF1	-	FALSE
chr1	38423182	G	C	0.00664	SF3A3	-	FALSE	AluJo	SINE,Alu
chr17	57281069	A	G	0.00278	PRR11	+	TRUE	AluSz	SINE,Alu
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr6	13788200	T	C	0.00879	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	94995236	G	A	0.00803	F3	-	FALSE
chr3	109045430	G	A	4.43689E-05	DPPA4	-	FALSE
chr19	9672989	T	C	0.00044		.	FALSE	AluSx3	SINE,Alu
chr3	48787715	T	C	0.00863	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr9	9442082	T	G	0.00052	PTPRD	-	FALSE	7SLRNA	SINE,Alu
chr1	10517659	T	C	0.00679		.	FALSE	AluSx1	SINE,Alu
chr1	28825415	A	G	1.13446E-06	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr10	13320129	A	G	0.00830	PHYH	-	FALSE
chr1	145512014	A	G	0.00370	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr9	125866691	A	C	0.00177	RABGAP1	+	FALSE
chr4	190878580	A	G	0.00097	FRG1	+	FALSE
chr1	16203172	A	G	8.98827E-07	SPEN	+	FALSE
chr2	58316814	A	G	0.00257	VRK2	+	FALSE
chr1	6283264	T	C	0.00479	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	114541533	T	C	0.00957		.	FALSE	L1ME3A	SINE,Alu
chr2	201774264	T	C	0.00099		.	FALSE	AluSz	SINE,Alu
chr17	41133089	C	T	0.00179	RUNDC1	+	FALSE
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr1	33147915	A	G	6.77632E-09	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	179327011	A	G	0.00930	SOAT1	+	TRUE
chr1	20978302	A	T	0.00038	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr9	132268957	A	G	0.00316	LINC00963	+	TRUE	AluYf1	SINE,Alu
chr3	194361676	C	T	0.00378	LSG1	-	FALSE	MSTA	SINE,Alu
chr12	123346990	G	T	0.00055	HIP1R	+	FALSE
chr15	41591417	A	G	2.88542E-07	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr6	33269307	T	C	0.00645		.	FALSE	AluSx	SINE,Alu
chr1	160966352	T	C	3.14235E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr1	11782984	A	G	0.00542		.	FALSE	AluSx	SINE,Alu
chr3	66430375	T	A	0.00091	LRIG1	-	FALSE
chr1	145513031	A	G	0.00705	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	73957124	A	G	2.00679E-05	TPRKB	-	FALSE
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr6	42856019	A	G	0.00184	RPL7L1	+	TRUE	AluSz	SINE,Alu

RBP	SMN1
Knock-Method	shRNA
RBP Family	SMN
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR129ROE
Platform	HiSeq
Pubmed ID	32252787

SMN1 - Target Gene Network