Dataset Overview
RBP
TAF15
Knock-Method
shRNA
RBP Family
RRM_1
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR998RZI
Platform
HiSeq
Pubmed ID
32252787
TAF15 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of TAF15
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
40.38
7.5
-2.55725
5.26085E-125
2.04446E-122
A1CF
29.02
22.95
-0.59873
4.26851E-14
2.32098E-13
A2M
2827.98
2157.04
-0.51354
1.05804E-11
4.66150E-11
A2M-AS1
0.26
0.63
1.11051
0.00204
0.00363
AACS
17.52
13.03
-0.63622
6.88242E-14
3.66979E-13
AADAT
2.45
5.75
0.85166
4.20751E-07
1.18260E-06
AAED1
4.64
10.19
0.93818
1.08198E-17
7.63684E-17
AAGAB
4.83
6.49
0.35016
0.00394
0.00669
AAK1
1.2
1.22
0.52150
0.00502
0.00835
AAMDC
27.35
23.5
-0.37483
0.00596
0.00979
Showing 1 to 10 of 9,495 entries
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Function Analysis of Target Genes of TAF15
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AC018865.8
130792283_130792404_130791882_130791950_130792706_130792835
0.00795
0.277
DataSet_01_465
View details
ACAA1
38167652_38167832_38167316_38167372_38168000_38168191
0.00000
-0.144
DataSet_01_465
View details
ACAA1
38167652_38167843_38167316_38167372_38168000_38168191
0.00000
-0.189
DataSet_01_465
View details
ACADM
76252384_76252550_76251717_76251959_76253181_76253260
0.00410
0.07
DataSet_01_465
View details
ACADM
76252384_76252601_76251717_76251959_76253181_76253260
0.00441
0.065
DataSet_01_465
View details
ACADM
76252384_76252539_76251717_76251959_76253181_76253260
0.00648
0.06
DataSet_01_465
View details
ACADM
76252384_76252482_76251717_76251959_76253181_76253260
0.00706
0.069
DataSet_01_465
View details
ACOT9
23731251_23731325_23725993_23726061_23739997_23740101
0.00890
0.105
DataSet_01_465
View details
ACSS2
33509765_33509906_33509450_33509669_33511125_33511234
0.00000
0.117
DataSet_01_465
View details
ACSS2
33509765_33509795_33509450_33509669_33511125_33511234
0.00013
0.114
DataSet_01_465
View details
Showing 1 to 10 of 515 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
A2M
9254042_9254270_9256834_9256996_9253739_9253803
0.00003
-0.095
DataSet_01_465
View details
ABHD4
23072294_23072362_23072492_23072667_23070571_23070660
0.00517
0.131
DataSet_01_465
View details
ACSS2
33481371_33481425_33496707_33496746_33470596_33470792
0.00120
0.095
DataSet_01_465
View details
AFP
74306318_74306530_74313178_74313393_74303890_74304023
0.00000
-0.114
DataSet_01_465
View details
AFP
74309067_74309161_74313178_74313330_74303842_74304023
0.00003
-0.683
DataSet_01_465
View details
AFP
74306475_74306530_74309067_74309161_74303842_74304023
0.00003
-0.158
DataSet_01_465
View details
AHSG
186333473_186333584_186334231_186334316_186330873_186331143
0.00000
0.116
DataSet_01_465
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ALB
74283247_74283386_74283804_74284028_74281972_74282070
0.00191
-0.078
DataSet_01_465
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AMT
49458924_49459005_49459536_49459704_49457643_49457775
0.00127
-0.233
DataSet_01_465
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AP2M1
183896644_183896910_183897956_183898039_183894738_183894855
0.00455
-0.133
DataSet_01_465
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Showing 1 to 10 of 161 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABHD3
19243638_19244191_19244078_19244191_19239130_19239304
0.00350
0.135
DataSet_01_465
View details
ACAA1
38167652_38168191_38168000_38168191_38167316_38167372
0.00000
-0.191
DataSet_01_465
View details
ACSS2
33509588_33509795_33509588_33509669_33511125_33511234
0.00003
0.08
DataSet_01_465
View details
ACSS2
33508334_33508563_33508334_33508512_33508808_33508969
0.00016
0.406
DataSet_01_465
View details
ACSS2
33508808_33508969_33508808_33508942_33509132_33509276
0.00390
0.065
DataSet_01_465
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ACSS2
33509132_33509276_33509132_33509265_33509346_33509403
0.00722
0.058
DataSet_01_465
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ANXA4
70033516_70033630_70033516_70033564_70035037_70035128
0.00760
-0.041
DataSet_01_465
View details
AP2M1
183900544_183900743_183900544_183900656_183901269_183901450
0.00512
0.072
DataSet_01_465
View details
APEX1
20923736_20923932_20923736_20923862_20924072_20924260
0.00001
0.051
DataSet_01_465
View details
BCL2L1
30309457_30310151_30309646_30310151_30252254_30253889
0.00009
-0.098
DataSet_01_465
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Showing 1 to 10 of 62 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACTG1
79478928_79479168_79478928_79479141_79479257_79479405
0.00000
-0.065
DataSet_01_465
View details
ASGR2
7010549_7010659_7010549_7010607_7011154_7011226
0.00677
-0.041
DataSet_01_465
View details
ATP6V1G2-DDX39B
31508190_31508343_31508190_31508311_31509726_31509925
0.00554
0.14
DataSet_01_465
View details
AUP1
74754067_74754272_74754067_74754186_74754374_74754490
0.00115
0.045
DataSet_01_465
View details
C17orf76-AS1
16342841_16343017_16342973_16343017_16342640_16342728
0.00736
-0.078
DataSet_01_465
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C1orf109
38148990_38149148_38148990_38149109_38151944_38152124
0.00526
0.294
DataSet_01_465
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C3
6684998_6685157_6684998_6685097_6686134_6686387
0.00000
-0.011
DataSet_01_465
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C3
6712518_6712647_6712518_6712613_6713199_6713326
0.00208
-0.008
DataSet_01_465
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CCDC23
43282101_43282276_43282101_43282251_43282860_43282923
0.00783
0.101
DataSet_01_465
View details
CERS2
150939231_150939373_150939231_150939338_150939549_150939678
0.00325
0.016
DataSet_01_465
View details
Showing 1 to 10 of 60 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AACS
125609250_125609570_125609250_125609315_125609447_125609570
0.00511
0.127
DataSet_01_465
View details
ACAA1
38167316_38168191_38167316_38167372_38168000_38168191
0.00170
-0.268
DataSet_01_465
View details
ACADVL
7124084_7124377_7124084_7124149_7124242_7124377
0.00060
0.068
DataSet_01_465
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ACADVL
7125985_7126556_7125985_7126184_7126451_7126556
0.00058
0.129
DataSet_01_465
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ACADVL
7123440_7123995_7123440_7123516_7123782_7123995
0.00141
0.069
DataSet_01_465
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ACTB
5568791_5569294_5568791_5569031_5569165_5569294
0.00396
0.012
DataSet_01_465
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AHSA2
61412636_61413632_61412636_61412753_61413580_61413632
0.00051
0.183
DataSet_01_465
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AKR1B1
134132049_134132813_134132049_134132133_134132731_134132813
0.00432
0.067
DataSet_01_465
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ANO9
419581_420615_419581_419729_420462_420615
0.00626
0.297
DataSet_01_465
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APEX1
20923736_20924260_20923736_20923862_20924072_20924260
0.00001
0.102
DataSet_01_465
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
46159823
T
A
0.00474
TMEM69
+
FALSE
chr1
10521103
T
C
0.00788
DFFA
-
TRUE
AluY
SINE,Alu
chr1
38001614
T
C
0.00222
SNIP1
-
TRUE
AluSx
SINE,Alu
chr1
226923264
G
A
0.00046
ITPKB
-
FALSE
chr1
59120961
G
A
0.00383
MYSM1
-
FALSE
chr1
14150032
C
T
0.00163
PRDM2
+
FALSE
chr1
36787880
C
T
0.00023
EVA1B
-
FALSE
chr1
109240643
A
C
0.00608
PRPF38B
+
FALSE
chr1
16889339
C
T
0.00129
NBPF1
-
FALSE
L1MC4
SINE,Alu
chr1
16912029
C
G
0.00177
NBPF1
-
FALSE
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression